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U S A"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0370","doi-asserted-by":"crossref","first-page":"8989","DOI":"10.1128\/JVI.76.18.8989-9001.2002","article-title":"A single amino acid mutation in the PA subunit of the influenza virus RNA polymerase inhibits endonucleolytic cleavage of capped RNAs","volume":"76","author":"Fodor","year":"2002","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0375","doi-asserted-by":"crossref","first-page":"4624","DOI":"10.1128\/JVI.03500-14","article-title":"Dimerization of matrix protein is required for budding of respiratory syncytial virus","volume":"89","author":"F\u00f6rster","year":"2015","journal-title":"J. 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Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0425","doi-asserted-by":"crossref","first-page":"E1009062","DOI":"10.1371\/journal.ppat.1009062","article-title":"Structural intermediates in the low pH-induced transition of influenza hemagglutinin","volume":"16","author":"Gao","year":"2020","journal-title":"PLoS Pathog."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0430","doi-asserted-by":"crossref","first-page":"779","DOI":"10.1126\/science.abb7498","article-title":"Structure of the RNA-dependent RNA polymerase from covid-19 virus","volume":"368","author":"Gao","year":"2020","journal-title":"Science"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0435","doi-asserted-by":"crossref","first-page":"243","DOI":"10.1006\/viro.1993.1366","article-title":"Cytoplasmic inclusions of respiratory syncytial virus-infected cells: formation of inclusion bodies in transfected cells that coexpress the nucleoprotein, the phosphoprotein, and the 22K protein","volume":"195","author":"Garc\u00eda","year":"1993","journal-title":"Virology"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0440","doi-asserted-by":"crossref","first-page":"16604","DOI":"10.1073\/pnas.1314419110","article-title":"A functional sequence-specific interaction between influenza a virus genomic RNA segments","volume":"110","author":"Gavazzi","year":"2013","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0445","doi-asserted-by":"crossref","first-page":"E56762","DOI":"10.1371\/journal.pone.0056762","article-title":"Hsp90 inhibitors exhibit resistance-free antiviral activity against respiratory syncytial virus","volume":"8","author":"Geller","year":"2013","journal-title":"PloS One"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0450","doi-asserted-by":"crossref","first-page":"446","DOI":"10.1016\/j.tim.2014.04.001","article-title":"Selective packaging of the influenza A genome and consequences for genetic reassortment","volume":"22","author":"Gerber","year":"2014","journal-title":"Trends Microbiol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0455","doi-asserted-by":"crossref","DOI":"10.1016\/j.cell.2019.08.014","article-title":"Structure of the respiratory syncytial virus polymerase complex","volume":"179","author":"Gilman","year":"2019","journal-title":"Cell"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0460","doi-asserted-by":"crossref","DOI":"10.1016\/j.celrep.2020.108630","article-title":"D614G mutation alters SARS-CoV-2 spike conformation and enhances protease cleavage at the S1\/S2 junction","volume":"34","author":"Gobeil","year":"2021","journal-title":"Cell Rep."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0465","doi-asserted-by":"crossref","first-page":"9859","DOI":"10.1073\/pnas.151098198","article-title":"Cleavage of the human respiratory syncytial virus fusion protein at two distinct sites is required for activation of membrane fusion","volume":"98","author":"Gonz\u00e1lez-Reyes","year":"2001","journal-title":"Proc. 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Rep."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0475","doi-asserted-by":"crossref","first-page":"2256","DOI":"10.1182\/blood.2021013231","article-title":"Insights in ChAdOx1 nCoV-19 vaccine-induced immune thrombotic thrombocytopenia","volume":"138","author":"Greinacher","year":"2021","journal-title":"Blood"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0480","doi-asserted-by":"crossref","first-page":"269","DOI":"10.1126\/science.281.5374.269","article-title":"Specific covalent labeling of recombinant protein molecules inside live cells","volume":"281","author":"Griffin","year":"1998","journal-title":"Science"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0485","doi-asserted-by":"crossref","first-page":"615","DOI":"10.1038\/s41586-020-2369-7","article-title":"Igf1r is an entry receptor for respiratory syncytial virus","volume":"583","author":"Griffiths","year":"2020","journal-title":"Nature"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0490","doi-asserted-by":"crossref","first-page":"2067","DOI":"10.1261\/rna.054221.115","article-title":"Influenza A virus preferentially snatches noncoding RNA caps","volume":"21","author":"Gu","year":"2015","journal-title":"RNA"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0495","doi-asserted-by":"crossref","first-page":"2182","DOI":"10.1016\/j.bpj.2013.03.054","article-title":"Actin mediates the nanoscale membrane organization of the clustered membrane protein influenza hemagglutinin","volume":"104","author":"Gudheti","year":"2013","journal-title":"Biophys. J."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0500","doi-asserted-by":"crossref","first-page":"30","DOI":"10.1016\/j.ceca.2018.08.003","article-title":"NAADP-dependent Ca(2+) signaling regulates middle east respiratory syndrome-coronavirus pseudovirus translocation through the endolysosomal system","volume":"75","author":"Gunaratne","year":"2018","journal-title":"Cell Calcium"},{"issue":"675","key":"10.1016\/bs.aivir.2023.05.002_bb0505","doi-asserted-by":"crossref","DOI":"10.1126\/scisignal.abd5605","article-title":"Essential requirement for JPT2 in NAADP-evoked Ca(2+) signaling","volume":"14","author":"Gunaratne","year":"2021","journal-title":"Sci. Signal."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0510","doi-asserted-by":"crossref","first-page":"1017","DOI":"10.1038\/s41591-020-0968-3","article-title":"Extrapulmonary manifestations of covid-19","volume":"26","author":"Gupta","year":"2020","journal-title":"Nat. Med."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0515","doi-asserted-by":"crossref","first-page":"82","DOI":"10.1046\/j.1365-2818.2000.00710.x","article-title":"Surpassing the lateral resolution limit by a factor of two using structured illumination microscopy","volume":"198","author":"Gustafsson","year":"2000","journal-title":"J. Microsc."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0520","doi-asserted-by":"crossref","first-page":"5808","DOI":"10.1128\/JVI.07207-11","article-title":"Visualizing coronavirus RNA synthesis in time by using click chemistry","volume":"86","author":"Hagemeijer","year":"2012","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0525","doi-asserted-by":"crossref","first-page":"837","DOI":"10.1056\/NEJMoa2110275","article-title":"Nirsevimab For prevention of rsv in healthy late-preterm and term infants","volume":"386","author":"Hammitt","year":"2022","journal-title":"N. Engl. J. Med."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0530","doi-asserted-by":"crossref","first-page":"E1009517","DOI":"10.1371\/journal.ppat.1009517","article-title":"Host factor Rab11a is critical for efficient assembly of influenza A virus genomic segments","volume":"17","author":"Han","year":"2021","journal-title":"PLoS Pathog."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0535","doi-asserted-by":"crossref","first-page":"1879","DOI":"10.1038\/s41564-022-01242-5","article-title":"Coinfection by influenza A virus and respiratory syncytial virus produces hybrid virus particles","volume":"7","author":"Haney","year":"2022","journal-title":"Nat. Microbiol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0540","doi-asserted-by":"crossref","first-page":"4355","DOI":"10.1038\/s41467-020-18108-1","article-title":"Selective flexible packaging pathways of the segmented genome of influenza A virus","volume":"11","author":"Haralampiev","year":"2020","journal-title":"Nat. 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Biol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0560","doi-asserted-by":"crossref","first-page":"965","DOI":"10.1083\/jcb.200412058","article-title":"Quantitative electron microscopy and fluorescence spectroscopy of the membrane distribution of influenza hemagglutinin","volume":"169","author":"Hess","year":"2005","journal-title":"J. Cell Biol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0565","doi-asserted-by":"crossref","first-page":"4258","DOI":"10.1529\/biophysj.106.091116","article-title":"Ultra-high resolution imaging by fluorescence photoactivation localization microscopy","volume":"91","author":"Hess","year":"2006","journal-title":"Biophys. J."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0570","doi-asserted-by":"crossref","first-page":"17370","DOI":"10.1073\/pnas.0708066104","article-title":"Dynamic clustered distribution of hemagglutinin resolved at 40 nm in living cell membranes discriminates between raft theories","volume":"104","author":"Hess","year":"2007","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0575","doi-asserted-by":"crossref","first-page":"3165","DOI":"10.1016\/S0264-410X(02)00268-2","article-title":"Eight-plasmid system for rapid generation of influenza virus vaccines","volume":"20","author":"Hoffmann","year":"2002","journal-title":"Vaccine"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0580","doi-asserted-by":"crossref","first-page":"4848","DOI":"10.1016\/j.cell.2021.08.017","article-title":"The origins of SARS-CoV-2: a critical review","volume":"184","author":"Holmes","year":"2021","journal-title":"Cell"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0585","doi-asserted-by":"crossref","first-page":"1007","DOI":"10.1126\/science.1100035","article-title":"Optical sectioning deep inside live embryos by selective plane illumination microscopy","volume":"305","author":"Huisken","year":"2004","journal-title":"Science"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0590","doi-asserted-by":"crossref","first-page":"10200","DOI":"10.1128\/JVI.01204-12","article-title":"Competitive incorporation of homologous gene segments of influenza A virus into virions","volume":"86","author":"Inagaki","year":"2012","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0595","doi-asserted-by":"crossref","first-page":"8722","DOI":"10.1128\/JVI.00253-07","article-title":"Clathrin-dependent entry of severe acute respiratory syndrome coronavirus into target cells expressing ACE2 with the cytoplasmic tail deleted","volume":"81","author":"Inoue","year":"2007","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0600","doi-asserted-by":"crossref","DOI":"10.1016\/j.molcel.2020.11.041","article-title":"Genomic RNA elements drive phase separation of the SARS-CoV-2 nucleocapsid","volume":"80","author":"Iserman","year":"2020","journal-title":"Mol. 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A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0610","doi-asserted-by":"crossref","first-page":"4756","DOI":"10.1021\/nl103427w","article-title":"Single-molecule kinetics and super-resolution microscopy by fluorescence imaging of transient binding on DNA origami","volume":"10","author":"Jungmann","year":"2010","journal-title":"Nano Lett."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0615","doi-asserted-by":"crossref","first-page":"313","DOI":"10.1038\/nmeth.2835","article-title":"Multiplexed 3D cellular super-resolution imaging with DNA-paint and exchange-paint","volume":"11","author":"Jungmann","year":"2014","journal-title":"Nat. Methods"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0620","doi-asserted-by":"crossref","first-page":"12885","DOI":"10.1073\/pnas.0603144103","article-title":"Severe acute respiratory syndrome coronavirus nsp1 protein suppresses host gene expression by promoting host mRNA degradation","volume":"103","author":"Kamitani","year":"2006","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0625","doi-asserted-by":"crossref","first-page":"13961","DOI":"10.1073\/pnas.94.25.13961","article-title":"Respiratory syncytial virus (RSV) SH and G proteins are not essential for viral replication in vitro: clinical evaluation and molecular characterization of a cold-passaged, attenuated RSV subgroup B mutant","volume":"94","author":"Karron","year":"1997","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0630","doi-asserted-by":"crossref","first-page":"11086","DOI":"10.1128\/JVI.00453-12","article-title":"YB-1 functions as a porter to lead influenza virus ribonucleoprotein complexes to microtubules","volume":"86","author":"Kawaguchi","year":"2012","journal-title":"J. Virol."},{"issue":"8","key":"10.1016\/bs.aivir.2023.05.002_bb0635","doi-asserted-by":"crossref","DOI":"10.3390\/v10080446","article-title":"The morphology and assembly of respiratory syncytial virus revealed by cryo-electron tomography","volume":"10","author":"Ke","year":"2018","journal-title":"Viruses"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0640","doi-asserted-by":"crossref","first-page":"498","DOI":"10.1038\/s41586-020-2665-2","article-title":"Structures and distributions of SARS-CoV-2 spike proteins on intact virions","volume":"588","author":"Ke","year":"2020","journal-title":"Nature"},{"issue":"2","key":"10.1016\/bs.aivir.2023.05.002_bb0645","doi-asserted-by":"crossref","first-page":"181","DOI":"10.1007\/s40265-022-01829-6","article-title":"Nirsevimab: first approval","volume":"83","author":"Keam","year":"2022","journal-title":"Drugs"},{"issue":"4","key":"10.1016\/bs.aivir.2023.05.002_bb0650","doi-asserted-by":"crossref","DOI":"10.1242\/jcs.242834","article-title":"Optimizing live-cell fluorescence imaging conditions to minimize phototoxicity","volume":"133","author":"Kiepas","year":"2020","journal-title":"J. Cell Sci."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0655","doi-asserted-by":"crossref","DOI":"10.1016\/j.cell.2020.04.011","article-title":"The architecture of SARS-CoV-2 transcriptome","volume":"181","author":"Kim","year":"2020","journal-title":"Cell"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0660","doi-asserted-by":"crossref","first-page":"532","DOI":"10.1074\/mcp.M114.044107","article-title":"New host factors important for respiratory syncytial virus (RSV) replication revealed by a novel microfluidics screen for interactors of matrix (M) protein","volume":"14","author":"Kipper","year":"2015","journal-title":"Mol. Cell. Proteomics"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0665","doi-asserted-by":"crossref","first-page":"2342","DOI":"10.1038\/s41467-019-10280-3","article-title":"Structure of the Sars-Cov nsp12 polymerase bound to nsp7 and nsp8 co-factors","volume":"10","author":"Kirchdoerfer","year":"2019","journal-title":"Nat. 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Commun."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0685","doi-asserted-by":"crossref","first-page":"E226","DOI":"10.1371\/journal.pbio.0060226","article-title":"Sars-coronavirus replication is supported by a reticulovesicular network of modified endoplasmic reticulum","volume":"6","author":"Knoops","year":"2008","journal-title":"PLoS Biol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0690","doi-asserted-by":"crossref","first-page":"E107821","DOI":"10.15252\/embj.2021107821","article-title":"TMPRSS2 expression dictates the entry route used by SARS-CoV-2 to infect host cells","volume":"40","author":"Koch","year":"2021","journal-title":"EMBO J."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0695","doi-asserted-by":"crossref","first-page":"4450","DOI":"10.1038\/s41598-019-41023-5","article-title":"Super-resolution microscopy reveals significant impact of M2e-specific monoclonal antibodies on influenza A virus filament formation at the host cell surface","volume":"9","author":"Kolpe","year":"2019","journal-title":"Sci. Rep."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0700","doi-asserted-by":"crossref","first-page":"813","DOI":"10.1038\/nature08699","article-title":"Human host factors required for influenza virus replication","volume":"463","author":"Konig","year":"2010","journal-title":"Nature"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0705","doi-asserted-by":"crossref","first-page":"460","DOI":"10.1038\/s41594-019-0232-z","article-title":"Structural snapshots of actively transcribing influenza polymerase","volume":"26","author":"Kouba","year":"2019","journal-title":"Nat. Struct. Mol. Biol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0710","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1038\/s41572-018-0002-y","article-title":"Influenza","volume":"4","author":"Krammer","year":"2018","journal-title":"Nat. Rev. Dis. 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A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0735","doi-asserted-by":"crossref","first-page":"997","DOI":"10.1016\/j.cell.2005.12.038","article-title":"Ligands for clathrin-mediated endocytosis are differentially sorted into distinct populations of early endosomes","volume":"124","author":"Lakadamyali","year":"2006","journal-title":"Cell"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0740","doi-asserted-by":"crossref","first-page":"E1003971","DOI":"10.1371\/journal.ppat.1003971","article-title":"Influenza A virus assembly intermediates fuse in the cytoplasm","volume":"10","author":"Lakdawala","year":"2014","journal-title":"PLoS Pathog."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0745","doi-asserted-by":"crossref","first-page":"E1006121","DOI":"10.1371\/journal.ppat.1006121","article-title":"Correction: influenza A virus assembly intermediates fuse in the cytoplasm","volume":"12","author":"Lakdawala","year":"2016","journal-title":"PLoS Pathog."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0750","doi-asserted-by":"crossref","first-page":"215","DOI":"10.1038\/s41586-020-2180-5","article-title":"Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor","volume":"581","author":"Lan","year":"2020","journal-title":"Nature"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0755","doi-asserted-by":"crossref","first-page":"E2284","DOI":"10.1002\/rmv.2284","article-title":"A systematic review on global rsv genetic data: identification of knowledge gaps","volume":"32","author":"Langedijk","year":"2022","journal-title":"Rev. Med. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0760","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2022.880394","article-title":"Identification of cytoplasmic chaperone networks relevant for respiratory syncytial virus replication","volume":"13","author":"Latorre","year":"2022","journal-title":"Front. Microbiol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0765","doi-asserted-by":"crossref","DOI":"10.1016\/j.celrep.2020.107823","article-title":"Mapping of influenza virus rna-rna interactions reveals a flexible network","volume":"31","author":"Le Sage","year":"2020","journal-title":"Cell Rep."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0770","doi-asserted-by":"crossref","first-page":"58","DOI":"10.1016\/j.virusres.2019.04.006","article-title":"Characterization of the role of N-glycosylation sites in the respiratory syncytial virus fusion protein in virus replication, syncytium formation and antigenicity","volume":"266","author":"Leemans","year":"2019","journal-title":"Virus Res."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0775","doi-asserted-by":"crossref","DOI":"10.1038\/s43586-021-00038-x","article-title":"Single-molecule localization microscopy","volume":"1","author":"Lelek","year":"2021","journal-title":"Nat. Rev. Methods Primers"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0780","doi-asserted-by":"crossref","first-page":"237","DOI":"10.1146\/annurev-virology-110615-042301","article-title":"Structure, function, and evolution of coronavirus spike proteins","volume":"3","author":"Li","year":"2016","journal-title":"Annu. Rev. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0785","doi-asserted-by":"crossref","first-page":"1864","DOI":"10.1126\/science.1116480","article-title":"Structure of sars coronavirus spike receptor-binding domain complexed with receptor","volume":"309","author":"Li","year":"2005","journal-title":"Science"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0790","doi-asserted-by":"crossref","first-page":"8863","DOI":"10.1128\/JVI.00343-08","article-title":"Association of respiratory syncytial virus M protein with viral nucleocapsids is mediated by the M2-1 Protein","volume":"82","author":"Li","year":"2008","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0795","doi-asserted-by":"crossref","first-page":"241","DOI":"10.1111\/j.1750-2659.2009.00095.x","article-title":"Influenza virus assays based on virus-inducible reporter cell lines","volume":"3","author":"Li","year":"2009","journal-title":"Influenza Other Respir. Viruses"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0800","doi-asserted-by":"crossref","first-page":"7204","DOI":"10.1128\/JVI.00203-10","article-title":"Genetically engineered, biarsenically labeled influenza virus allows visualization of viral Ns1 protein in living cells","volume":"84","author":"Li","year":"2010","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0805","doi-asserted-by":"crossref","first-page":"E1031","DOI":"10.1016\/S2214-109X(19)30264-5","article-title":"Global patterns in monthly activity of influenza virus, respiratory syncytial virus, parainfluenza virus, and metapneumovirus: a systematic analysis","volume":"7","author":"Li","year":"2019","journal-title":"Lancet Glob. Health"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0810","doi-asserted-by":"crossref","first-page":"1170","DOI":"10.1261\/rna.073866.119","article-title":"Influenza A virus utilizes noncanonical cap-snatching to diversify its mRNA\/ncRNA","volume":"26","author":"Li","year":"2020","journal-title":"RNA"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0815","doi-asserted-by":"crossref","first-page":"1199","DOI":"10.1056\/NEJMoa2001316","article-title":"Early transmission dynamics in Wuhan, China, of novel coronavirus-infected pneumonia","volume":"382","author":"Li","year":"2020","journal-title":"N. Engl. J. Med."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0820","doi-asserted-by":"crossref","first-page":"1933","DOI":"10.1016\/j.csbj.2021.04.001","article-title":"Dependence of SARS-CoV-2 infection on cholesterol-rich lipid raft and endosomal acidification","volume":"19","author":"Li","year":"2021","journal-title":"Comput. Struct. Biotechnol. J."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0825","doi-asserted-by":"crossref","first-page":"2047","DOI":"10.1016\/S0140-6736(22)00478-0","article-title":"Global, regional, and national disease burden estimates of acute lower respiratory infections due to respiratory syncytial virus in children younger than 5 years in 2019: a systematic analysis","volume":"399","author":"Li","year":"2022","journal-title":"Lancet"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0830","doi-asserted-by":"crossref","first-page":"8245","DOI":"10.1128\/JVI.00215-12","article-title":"Human respiratory syncytial virus nucleoprotein and inclusion bodies antagonize the innate immune response mediated by MDA5 and MAVS","volume":"86","author":"Lifland","year":"2012","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0835","doi-asserted-by":"crossref","first-page":"E1007963","DOI":"10.1371\/journal.ppat.1007963","article-title":"The alpha-1 subunit of the Na+,K+-ATPase (ATP1A1) is required for macropinocytic entry of respiratory syncytial virus (RSV) in human respiratory epithelial cells","volume":"15","author":"Lingemann","year":"2019","journal-title":"PLoS Pathog."},{"issue":"12","key":"10.1016\/bs.aivir.2023.05.002_bb0840","doi-asserted-by":"crossref","DOI":"10.1172\/jci.insight.139042","article-title":"Molecular detection of SARS-CoV-2 in formalin-fixed, paraffin-embedded specimens","volume":"5","author":"Liu","year":"2020","journal-title":"JCI Insight"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0845","article-title":"Integrin mediates cell entry of the SARS-CoV-2 virus independent of cellular receptor ACE2","volume":"298","author":"Liu","year":"2022","journal-title":"J. Biol. Chem."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0850","doi-asserted-by":"crossref","first-page":"154","DOI":"10.1016\/j.virol.2009.08.015","article-title":"Nuclear dynamics of influenza A virus ribonucleoproteins revealed by live-cell imaging studies","volume":"394","author":"Loucaides","year":"2009","journal-title":"Virology"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0855","doi-asserted-by":"crossref","first-page":"1037","DOI":"10.1242\/jcs.198853","article-title":"Caveolae provide a specialized membrane environment for respiratory syncytial virus assembly","volume":"130","author":"Ludwig","year":"2017","journal-title":"J. Cell Sci."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0860","doi-asserted-by":"crossref","first-page":"E105114","DOI":"10.15252\/embj.20105114","article-title":"SARS-CoV-2 receptor ACE2 and TMPRSS2 are primarily expressed in bronchial transient secretory cells","volume":"39","author":"Lukassen","year":"2020","journal-title":"EMBO J."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0865","doi-asserted-by":"crossref","first-page":"13","DOI":"10.1016\/j.jviromet.2005.01.016","article-title":"Virus-inducible reporter genes as a tool for detecting and quantifying influenza A virus replication","volume":"126","author":"Lutz","year":"2005","journal-title":"J. Virol. Methods"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0870","doi-asserted-by":"crossref","first-page":"24","DOI":"10.1038\/s41421-021-00258-1","article-title":"Distinct uptake, amplification, and release of SARS-CoV-2 by M1 and M2 alveolar macrophages","volume":"7","author":"Lv","year":"2021","journal-title":"Cell Discov."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0875","doi-asserted-by":"crossref","first-page":"11531","DOI":"10.1073\/pnas.0914994107","article-title":"Analysis of in vivo dynamics of influenza virus infection in mice using a GFP reporter virus","volume":"107","author":"Manicassamy","year":"2010","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0880","doi-asserted-by":"crossref","first-page":"16707","DOI":"10.1074\/jbc.M510233200","article-title":"Membrane accumulation of influenza A virus hemagglutinin triggers nuclear export of the viral genome via protein kinase Calpha-mediated activation of ERK signaling","volume":"281","author":"Marjuki","year":"2006","journal-title":"J. Biol. Chem."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0885","doi-asserted-by":"crossref","first-page":"134","DOI":"10.1186\/1743-422X-4-134","article-title":"Higher polymerase activity of a human influenza virus enhances activation of the hemagglutinin-induced Raf\/MEK\/ERK signal cascade","volume":"4","author":"Marjuki","year":"2007","journal-title":"Virol. J."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0890","doi-asserted-by":"crossref","first-page":"293","DOI":"10.1016\/j.virusres.2014.06.006","article-title":"Phylogeny and population dynamics of respiratory syncytial virus (RSV) A and B","volume":"189","author":"Martinelli","year":"2014","journal-title":"Virus Res."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0895","doi-asserted-by":"crossref","first-page":"261","DOI":"10.3390\/v13020261","article-title":"Identification of RSV fusion protein interaction domains on the virus receptor, Nucleolin","volume":"13","author":"Mastrangelo","year":"2021","journal-title":"Viruses"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0900","doi-asserted-by":"crossref","first-page":"601","DOI":"10.1083\/jcb.91.3.601","article-title":"Infectious entry pathway of influenza virus in a canine kidney cell line","volume":"91","author":"Matlin","year":"1981","journal-title":"J. Cell Biol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0905","series-title":"Challenges and Opportunities for Respiratory Syncytial Virus Vaccines","first-page":"83","article-title":"Structure and function of respiratory syncytial virus surface glycoproteins","author":"Mclellan","year":"2013"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0910","doi-asserted-by":"crossref","first-page":"E1006062","DOI":"10.1371\/journal.ppat.1006062","article-title":"Actin-related protein 2 (ARP2) and virus-induced filopodia facilitate human respiratory syncytial virus spread","volume":"12","author":"Mehedi","year":"2016","journal-title":"PLoS Pathog."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0915","doi-asserted-by":"crossref","first-page":"4629","DOI":"10.1038\/s41467-021-24887-y","article-title":"Correlative multi-scale cryo-imaging unveils SARS-CoV-2 assembly and egress","volume":"12","author":"Mendonca","year":"2021","journal-title":"Nat. Commun."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0920","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1016\/j.virol.2017.12.015","article-title":"Physiological and molecular triggers for SARS-CoV membrane fusion and entry into host cells","volume":"517","author":"Millet","year":"2018","journal-title":"Virology"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0925","doi-asserted-by":"crossref","first-page":"4432","DOI":"10.1128\/JVI.06744-11","article-title":"The human respiratory syncytial virus matrix protein is required for maturation of viral filaments","volume":"86","author":"Mitra","year":"2012","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0930","doi-asserted-by":"crossref","first-page":"578","DOI":"10.1038\/s41564-018-0332-2","article-title":"Influenza virus uses transportin 1 for vRNP debundling during cell entry","volume":"4","author":"Miyake","year":"2019","journal-title":"Nat. Microbiol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0935","doi-asserted-by":"crossref","first-page":"256","DOI":"10.1016\/j.jaerosci.2008.11.002","article-title":"Size distribution and sites of origin of droplets expelled from the human respiratory tract during expiratory activities","volume":"40","author":"Morawska","year":"2009","journal-title":"J. Aerosol Sci."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0940","doi-asserted-by":"crossref","first-page":"481","DOI":"10.3390\/molecules24030481","article-title":"A spotlight on viruses\u2014Application of click chemistry to visualize virus-cell interactions","volume":"24","author":"M\u00fcller","year":"2019","journal-title":"Molecules"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0945","doi-asserted-by":"crossref","DOI":"10.1128\/mBio.01248-16","article-title":"Complete and incomplete genome packaging of influenza A and B viruses","volume":"7","author":"Nakatsu","year":"2016","journal-title":"MBio"},{"issue":"12","key":"10.1016\/bs.aivir.2023.05.002_bb0950","doi-asserted-by":"crossref","DOI":"10.3390\/jimaging6120143","article-title":"Deep learning and handcrafted features for virus image classification","volume":"6","author":"Nanni","year":"2020","journal-title":"J. Imaging"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0955","doi-asserted-by":"crossref","first-page":"842","DOI":"10.1016\/j.jmb.2018.12.014","article-title":"Fluorescent trimeric hemagglutinins reveal multivalent receptor binding properties","volume":"431","author":"Nemanichvili","year":"2019","journal-title":"J. Mol. Biol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0960","doi-asserted-by":"crossref","first-page":"11","DOI":"10.1016\/j.jsb.2010.11.021","article-title":"A structural analysis of M protein in coronavirus assembly and morphology","volume":"174","author":"Neuman","year":"2011","journal-title":"J. Struct. Biol."},{"issue":"166","key":"10.1016\/bs.aivir.2023.05.002_bb0965","doi-asserted-by":"crossref","DOI":"10.1183\/16000617.0105-2022","article-title":"Burden of respiratory syncytial virus infection in older and high-risk adults: a systematic review and meta-analysis of the evidence from developed countries","volume":"31","author":"Nguyen-Van-Tam","year":"2022","journal-title":"Eur. Respir. Rev."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0970","doi-asserted-by":"crossref","first-page":"421","DOI":"10.1038\/s41596-021-00648-5","article-title":"High-resolution in situ structure determination by cryo-electron tomography and subtomogram averaging using emclarity","volume":"17","author":"Ni","year":"2022","journal-title":"Nat. Protoc."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0975","doi-asserted-by":"crossref","first-page":"2245","DOI":"10.1002\/anie.201309847","article-title":"Minimal tags for rapid dual-color live-cell labeling and super-resolution microscopy","volume":"53","author":"Niki\u0107","year":"2014","journal-title":"Angew. Chem. Int. Ed."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0980","doi-asserted-by":"crossref","first-page":"490","DOI":"10.1038\/nature04378","article-title":"Architecture of ribonucleoprotein complexes in influenza A virus particles","volume":"439","author":"Noda","year":"2006","journal-title":"Nature"},{"key":"10.1016\/bs.aivir.2023.05.002_bb0985","doi-asserted-by":"crossref","first-page":"54","DOI":"10.1038\/s41467-017-02517-w","article-title":"Importance of the 1+7 configuration of ribonucleoprotein complexes for influenza a virus genome packaging","volume":"9","author":"Noda","year":"2018","journal-title":"Nat. Commun."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0990","doi-asserted-by":"crossref","first-page":"E1007548","DOI":"10.1371\/journal.ppat.1007548","article-title":"Killing two birds with one stone: how the respiratory syncytial virus polymerase initiates transcription and replication","volume":"15","author":"Noton","year":"2019","journal-title":"PLoS Pathog."},{"key":"10.1016\/bs.aivir.2023.05.002_bb0995","doi-asserted-by":"crossref","first-page":"E1009212","DOI":"10.1371\/journal.ppat.1009212","article-title":"Hydroxychloroquine-mediated inhibition of SARS-CoV-2 entry is attenuated by TMPRSS2","volume":"17","author":"Ou","year":"2021","journal-title":"PLoS Pathog."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1000","doi-asserted-by":"crossref","DOI":"10.1155\/2010\/506363","article-title":"Construction and characterization of insect cell-derived influenza VLP: cell binding, fusion and EGFP incorporation","volume":"2010","author":"Pan","year":"2010","journal-title":"J. Biomed. Biotechnol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1005","doi-asserted-by":"crossref","first-page":"223","DOI":"10.1099\/0022-1317-43-1-223","article-title":"Studies on the mechanism of influenza virus entry into cells","volume":"43","author":"Patterson","year":"1979","journal-title":"J. Gen. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1010","series-title":"Viruses","article-title":"Chapter 20\u2014Families paramyxoviridae and pneumoviridae","author":"Payne","year":"2017"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1015","doi-asserted-by":"crossref","first-page":"E106478","DOI":"10.15252\/embj.2020106478","article-title":"SARS-CoV-2 nucleocapsid protein phase-separates with RNA and with human hnRNPs","volume":"39","author":"Perdikari","year":"2020","journal-title":"EMBO J."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1020","doi-asserted-by":"crossref","first-page":"675","DOI":"10.3389\/fimmu.2019.00675","article-title":"Fix your membrane receptor imaging: actin cytoskeleton and CD4 membrane organization disruption by chemical fixation","volume":"10","author":"Pereira","year":"2019","journal-title":"Front. Immunol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1025","doi-asserted-by":"crossref","first-page":"439","DOI":"10.1038\/nrmicro2147","article-title":"Coronaviruses post-sars: update on replication and pathogenesis","volume":"7","author":"Perlman","year":"2009","journal-title":"Nat. Rev. Microbiol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1030","doi-asserted-by":"crossref","first-page":"355","DOI":"10.1038\/nature14008","article-title":"Structure of influenza A polymerase bound to the viral RNA promoter","volume":"516","author":"Pflug","year":"2014","journal-title":"Nature"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1035","doi-asserted-by":"crossref","first-page":"847","DOI":"10.1016\/0092-8674(81)90449-9","article-title":"A unique cap(m7GpppXm)-dependent influenza virion endonuclease cleaves capped RNAs to generate the primers that initiate viral RNA transcription","volume":"23","author":"Plotch","year":"1981","journal-title":"Cell"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1040","doi-asserted-by":"crossref","first-page":"3473","DOI":"10.1128\/JVI.73.4.3473-3476.1999","article-title":"Direct evidence that the poly(A) tail of influenza A virus mRNA is synthesized by reiterative copying of a U track in the virion RNA template","volume":"73","author":"Poon","year":"1999","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1045","doi-asserted-by":"crossref","first-page":"135","DOI":"10.1016\/j.bbrc.2020.03.044","article-title":"Single cell RNA sequencing of 13 human tissues identify cell types and receptors of human coronaviruses","volume":"526","author":"Qi","year":"2020","journal-title":"Biochem. Biophys. Res. Commun."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1050","doi-asserted-by":"crossref","first-page":"2577","DOI":"10.1073\/pnas.1812632116","article-title":"Real-time dissection of dynamic uncoating of individual influenza viruses","volume":"116","author":"Qin","year":"2019","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1055","doi-asserted-by":"crossref","first-page":"1829","DOI":"10.1074\/mcp.M110.001651","article-title":"Protein analysis of purified respiratory syncytial virus particles reveals an important role for heat shock protein 90 in virus particle assembly","volume":"9","author":"Radhakrishnan","year":"2010","journal-title":"Mol. Cell. Proteomics"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1060","doi-asserted-by":"crossref","first-page":"5104","DOI":"10.1038\/ncomms6104","article-title":"Visualizing the replication of respiratory syncytial virus in cells and in living mice","volume":"5","author":"Rameix-Welti","year":"2014","journal-title":"Nat. Commun."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1065","doi-asserted-by":"crossref","first-page":"361","DOI":"10.1038\/nature14009","article-title":"Structural insight into cap-snatching and RNA synthesis by influenza polymerase","volume":"516","author":"Reich","year":"2014","journal-title":"Nature"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1070","doi-asserted-by":"crossref","first-page":"11346","DOI":"10.1038\/srep11346","article-title":"Generation of a variety of stable influenza A reporter viruses by genetic engineering of the NS gene segment","volume":"5","author":"Reuther","year":"2015","journal-title":"Sci. Rep."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1075","doi-asserted-by":"crossref","first-page":"E1006920","DOI":"10.1371\/journal.ppat.1006920","article-title":"RSV hijacks cellular protein phosphatase 1 to regulate M2-1 phosphorylation and viral transcription","volume":"14","author":"Richard","year":"2018","journal-title":"PLoS Pathog."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1080","doi-asserted-by":"crossref","first-page":"563","DOI":"10.1038\/s41467-017-00655-9","article-title":"Functional organization of cytoplasmic inclusion bodies in cells infected by respiratory syncytial virus","volume":"8","author":"Rincheval","year":"2017","journal-title":"Nat. Commun."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1085","doi-asserted-by":"crossref","first-page":"375","DOI":"10.1099\/vir.0.80563-0","article-title":"The respiratory syncytial virus small hydrophobic protein is phosphorylated via a mitogen-activated protein kinase P38-dependent tyrosine kinase activity during virus infection","volume":"86","author":"Rixon","year":"2005","journal-title":"J. Gen. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1090","doi-asserted-by":"crossref","DOI":"10.1016\/j.bbadis.2022.166347","article-title":"Virus morphology: insights from super-resolution fluorescence microscopy","volume":"1868","author":"Robb","year":"2022","journal-title":"Biochim. Biophys. Acta Mol. Basis Dis."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1095","doi-asserted-by":"crossref","first-page":"6466","DOI":"10.1093\/nar\/gkz313","article-title":"Real-time analysis of single influenza virus replication complexes reveals large promoter-dependent differences in initiation dynamics","volume":"47","author":"Robb","year":"2019","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1100","doi-asserted-by":"crossref","first-page":"157","DOI":"10.1128\/jvi.38.1.157-163.1981","article-title":"Polyadenylation sites for influenza virus mRNA","volume":"38","author":"Robertson","year":"1981","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1105","doi-asserted-by":"crossref","first-page":"5078","DOI":"10.1128\/JVI.00119-10","article-title":"Influenza virus M2 ion channel protein is necessary for filamentous virion formation","volume":"84","author":"Rossman","year":"2010","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1110","doi-asserted-by":"crossref","first-page":"10950","DOI":"10.1128\/JVI.05992-11","article-title":"Filamentous influenza virus enters cells via macropinocytosis","volume":"86","author":"Rossman","year":"2012","journal-title":"J. Virol."},{"issue":"Pt. 11","key":"10.1016\/bs.aivir.2023.05.002_bb1115","doi-asserted-by":"crossref","first-page":"2785","DOI":"10.1099\/0022-1317-69-11-2785","article-title":"Studies on the structure of the influenza virus haemagglutinin at the Ph of membrane fusion","volume":"69","author":"Ruigrok","year":"1988","journal-title":"J. Gen. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1120","doi-asserted-by":"crossref","first-page":"567","DOI":"10.1038\/nsmb769","article-title":"Assembly of endocytic machinery around individual influenza viruses during viral entry","volume":"11","author":"Rust","year":"2004","journal-title":"Nat. Struct. Mol. Biol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1125","doi-asserted-by":"crossref","first-page":"793","DOI":"10.1038\/nmeth929","article-title":"Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (storm)","volume":"3","author":"Rust","year":"2006","journal-title":"Nat. Methods"},{"issue":"3","key":"10.1016\/bs.aivir.2023.05.002_bb1130","doi-asserted-by":"crossref","first-page":"229","DOI":"10.1016\/j.tibs.2022.09.008","article-title":"Let's phase it: viruses are master architects of biomolecular condensates","volume":"48","author":"Sagan","year":"2022","journal-title":"Trends Biochem. Sci."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1135","doi-asserted-by":"crossref","first-page":"2013","DOI":"10.1128\/JVI.80.4.2013-2018.2006","article-title":"Dual wavelength imaging allows analysis of membrane fusion of influenza virus inside cells","volume":"80","author":"Sakai","year":"2006","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1140","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1038\/nmeth.1316","article-title":"Single molecule-sensitive probes for imaging RNA in live cells","volume":"6","author":"Santangelo","year":"2009","journal-title":"Nat. Methods"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1145","doi-asserted-by":"crossref","first-page":"587","DOI":"10.1097\/PAS.0000000000001650","article-title":"Postmortem findings associated with SARS-CoV-2: systematic review and meta-analysis","volume":"45","author":"Satturwar","year":"2021","journal-title":"Am. J. Surg. Pathol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1150","series-title":"RNA Viruses Infection","article-title":"Respiratory syncytial virus","author":"Sattya Narayan","year":"2022"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1155","doi-asserted-by":"crossref","first-page":"6041","DOI":"10.1038\/s41467-020-19843-1","article-title":"Nucleocapsid protein of SARS-CoV-2 phase separates into RNA-rich polymerase-containing condensates","volume":"11","author":"Savastano","year":"2020","journal-title":"Nat. Commun."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1160","doi-asserted-by":"crossref","first-page":"72","DOI":"10.1038\/s41556-018-0251-8","article-title":"Super-resolution microscopy demystified","volume":"21","author":"Schermelleh","year":"2019","journal-title":"Nat. Cell Biol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1165","doi-asserted-by":"crossref","first-page":"152","DOI":"10.1038\/nmeth.1855","article-title":"Immunolabeling artifacts and the need for live-cell imaging","volume":"9","author":"Schnell","year":"2012","journal-title":"Nat. Methods"},{"issue":"6 Suppl","key":"10.1016\/bs.aivir.2023.05.002_bb1170","first-page":"3","article-title":"Planning a maternal-fetal medicine program. The hospital's perspective","author":"Schwartz","year":"1989","journal-title":"Am. J. Perinatol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1175","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1016\/j.coviro.2021.03.001","article-title":"Entry of influenza A virus into host cells\u2014recent progress and remaining challenges","volume":"48","author":"Sempere Borau","year":"2021","journal-title":"Curr. Opin. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1180","doi-asserted-by":"crossref","first-page":"905","DOI":"10.1038\/nmeth819","article-title":"A guide to choosing fluorescent proteins","volume":"2","author":"Shaner","year":"2005","journal-title":"Nat. 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Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1210","doi-asserted-by":"crossref","first-page":"E1008656","DOI":"10.1371\/journal.ppat.1008656","article-title":"Influenza A viruses use multivalent sialic acid clusters for cell binding and receptor activation","volume":"16","author":"Sieben","year":"2020","journal-title":"PLoS Pathog."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1215","doi-asserted-by":"crossref","first-page":"167","DOI":"10.1016\/j.virol.2017.06.020","article-title":"Influenza A virus cap-snatches host RNAs based on their abundance early after infection","volume":"509","author":"Sikora","year":"2017","journal-title":"Virology"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1220","doi-asserted-by":"crossref","first-page":"5647","DOI":"10.1128\/JVI.74.12.5647-5654.2000","article-title":"Mouse hepatitis virus replicase proteins associate with two distinct populations of intracellular membranes","volume":"74","author":"Sims","year":"2000","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1225","doi-asserted-by":"crossref","first-page":"59","DOI":"10.1016\/bs.aivir.2016.08.008","article-title":"The nonstructural proteins directing coronavirus RNA synthesis and processing","volume":"96","author":"Snijder","year":"2016","journal-title":"Adv. Virus Res."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1230","doi-asserted-by":"crossref","first-page":"265","DOI":"10.1146\/annurev-virology-100114-055218","article-title":"Continuous and discontinuous RNA synthesis in coronaviruses","volume":"2","author":"Sola","year":"2015","journal-title":"Annu. Rev. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1235","doi-asserted-by":"crossref","first-page":"1082","DOI":"10.1038\/s41592-021-01236-x","article-title":"Deep learning enables fast and dense single-molecule localization with high accuracy","volume":"18","author":"Speiser","year":"2021","journal-title":"Nat. Methods"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1240","doi-asserted-by":"crossref","first-page":"1803","DOI":"10.1038\/emboj.2009.138","article-title":"Structural insight into the essential PB1-PB2 subunit contact of the influenza virus RNA polymerase","volume":"28","author":"Sugiyama","year":"2009","journal-title":"EMBO J."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1245","doi-asserted-by":"crossref","first-page":"4395","DOI":"10.1021\/acsnano.6b07853","article-title":"Real-time dissection of distinct dynamin-dependent endocytic routes of influenza A virus by quantum dot-based single-virus tracking","volume":"11","author":"Sun","year":"2017","journal-title":"ACS Nano"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1250","doi-asserted-by":"crossref","DOI":"10.1128\/JCM.01828-20","article-title":"Global molecular epidemiology of respiratory syncytial virus from the 2017-2018 INFORM-RSV study","volume":"59","author":"Tabor","year":"2020","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1255","doi-asserted-by":"crossref","first-page":"14610","DOI":"10.1073\/pnas.2235620100","article-title":"Influenza virus hemagglutinin concentrates in lipid raft microdomains for efficient viral fusion","volume":"100","author":"Takeda","year":"2003","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1260","doi-asserted-by":"crossref","first-page":"479","DOI":"10.1038\/nrmicro.2016.87","article-title":"Influenza virus RNA polymerase: insights into the mechanisms of viral RNA synthesis","volume":"14","author":"Te Velthuis","year":"2016","journal-title":"Nat. Rev. Microbiol."},{"issue":"3","key":"10.1016\/bs.aivir.2023.05.002_bb1265","doi-asserted-by":"crossref","DOI":"10.1128\/JVI.01775-17","article-title":"Initiation, elongation, and realignment during influenza virus mRNA synthesis","volume":"92","author":"Te Velthuis","year":"2018","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1270","doi-asserted-by":"crossref","DOI":"10.1038\/nmicrobiol.2016.29","article-title":"The role of the priming loop in influenza A virus RNA synthesis","volume":"1","author":"Te Velthuis","year":"2016","journal-title":"Nat. Microbiol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1275","doi-asserted-by":"crossref","first-page":"6825","DOI":"10.1128\/JVI.75.15.6825-6834.2001","article-title":"Functional analysis of recombinant respiratory syncytial virus deletion mutants lacking the small hydrophobic and\/or attachment glycoprotein gene","volume":"75","author":"Techaarpornkul","year":"2001","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1280","doi-asserted-by":"crossref","first-page":"561","DOI":"10.1038\/s41586-020-2294-9","article-title":"Rapid reconstruction of SARS-CoV-2 using a synthetic genomics platform","volume":"582","author":"Thi Nhu Thao","year":"2020","journal-title":"Nature"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1285","doi-asserted-by":"crossref","first-page":"1249","DOI":"10.1126\/science.abc8665","article-title":"Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2","volume":"369","author":"Thoms","year":"2020","journal-title":"Science"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1290","doi-asserted-by":"crossref","first-page":"271","DOI":"10.1007\/s00018-022-04300-7","article-title":"Nucleolin: a cell portal for viruses, bacteria, and toxins","volume":"79","author":"Tonello","year":"2022","journal-title":"Cell. Mol. Life Sci."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1295","doi-asserted-by":"crossref","first-page":"4269","DOI":"10.1073\/pnas.1116200109","article-title":"A distinct lineage of influenza A virus from bats","volume":"109","author":"Tong","year":"2012","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1300","doi-asserted-by":"crossref","first-page":"7684","DOI":"10.1128\/jvi.68.12.7684-7688.1994","article-title":"Evaluation of the genetic stability of the temperature-sensitive PB2 gene mutation of the influenza A\/Ann Arbor\/6\/60 cold-adapted vaccine virus","volume":"68","author":"Treanor","year":"1994","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1305","doi-asserted-by":"crossref","first-page":"66","DOI":"10.1136\/thoraxjnl-2012-202182","article-title":"Human respiratory syncytial virus viroporin SH: a viral recognition pathway used by the host to signal inflammasome activation","volume":"68","author":"Triantafilou","year":"2013","journal-title":"Thorax"},{"issue":"281\u2013294","key":"10.1016\/bs.aivir.2023.05.002_bb1310","first-page":"E19","article-title":"Low-fidelity assembly of influenza A virus promotes escape from host cells","volume":"176","author":"Vahey","year":"2019","journal-title":"Cell"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1315","doi-asserted-by":"crossref","first-page":"1564","DOI":"10.1056\/NEJMc2004973","article-title":"Aerosol and surface stability of SARS-CoV-2 as compared with SARS-CoV-1","volume":"382","author":"Van Doremalen","year":"2020","journal-title":"N. Engl. J. Med."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1320","doi-asserted-by":"crossref","first-page":"667","DOI":"10.1038\/s41467-017-00732-z","article-title":"RSV glycoprotein and genomic RNA dynamics reveal filament assembly prior to the plasma membrane","volume":"8","author":"Vanover","year":"2017","journal-title":"Nat. Commun."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1325","doi-asserted-by":"crossref","first-page":"1545","DOI":"10.1101\/gr.247064.118","article-title":"Direct RNA nanopore sequencing of full-length coronavirus genomes provides novel insights into structural variants and enables modification analysis","volume":"29","author":"Viehweger","year":"2019","journal-title":"Genome Res."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1330","article-title":"Ultrastructural characterization of a viral RNA and G-protein containing, membranous organelle formed in respiratory syncytial virus infected cells","author":"Vijayakrishnan","year":"2022","journal-title":"Biorxiv"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1335","doi-asserted-by":"crossref","first-page":"536","DOI":"10.1038\/s41564-020-0695-z","article-title":"The species severe acute respiratory syndrome-related coronavirus: classifying 2019-nCoV and naming it SARS-CoV-2","volume":"5","author":"Viruses, C. S. G. O. T. I. C. O. T. O","year":"2020","journal-title":"Nat. Microbiol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1340","article-title":"Determination of host proteins composing the microenvironment of coronavirus replicase complexes by proximity-labeling","volume":"8","author":"V\u2019kovski","year":"2019","journal-title":"Elife"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1345","doi-asserted-by":"crossref","first-page":"2196","DOI":"10.1128\/JVI.02187-06","article-title":"Influenza virion-derived viral ribonucleoproteins synthesize both mRNA and cRNA in vitro","volume":"81","author":"Vreede","year":"2007","journal-title":"J. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1350","doi-asserted-by":"crossref","first-page":"15348","DOI":"10.1038\/srep15348","article-title":"Light-induced cell damage in live-cell super-resolution microscopy","volume":"5","author":"W\u00e4ldchen","year":"2015","journal-title":"Sci. Rep."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1355","doi-asserted-by":"crossref","first-page":"13019","DOI":"10.1093\/nar\/gkab1160","article-title":"The SARS-CoV-2 RNA polymerase is a viral RNA capping enzyme","volume":"49","author":"Walker","year":"2021","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1360","doi-asserted-by":"crossref","first-page":"11157","DOI":"10.1073\/pnas.1708727114","article-title":"Tectonic conformational changes of a coronavirus spike glycoprotein promote membrane fusion","volume":"114","author":"Walls","year":"2017","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1365","doi-asserted-by":"crossref","first-page":"1735","DOI":"10.1016\/j.cell.2020.11.032","article-title":"Structure, function, and antigenicity of the SARS-CoV-2 spike glycoprotein","volume":"183","author":"Walls","year":"2020","journal-title":"Cell"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1370","doi-asserted-by":"crossref","first-page":"4529","DOI":"10.1038\/srep04529","article-title":"Real-time light scattering tracking of gold nanoparticles-bioconjugated respiratory syncytial virus infecting HEp-2 Cells","volume":"4","author":"Wan","year":"2014","journal-title":"Sci. Rep."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1375","doi-asserted-by":"crossref","first-page":"290","DOI":"10.1038\/cr.2008.15","article-title":"SARS coronavirus entry into host cells through a novel clathrin- and caveolae-independent endocytic pathway","volume":"18","author":"Wang","year":"2008","journal-title":"Cell Res."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1380","doi-asserted-by":"crossref","DOI":"10.1016\/j.cell.2020.03.045","article-title":"Structural and functional basis of SARS-CoV-2 entry by using human ACE2","volume":"181","author":"Wang","year":"2020","journal-title":"Cell"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1385","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1007\/978-1-0716-0900-2_1","article-title":"Coronaviruses: an updated overview of their replication and pathogenesis","volume":"2203","author":"Wang","year":"2020","journal-title":"Methods Mol. Biol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1390","doi-asserted-by":"crossref","first-page":"Eabd9149","DOI":"10.1126\/science.abd9149","article-title":"Airborne transmission of respiratory viruses","volume":"373","author":"Wang","year":"2021","journal-title":"Science"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1395","doi-asserted-by":"crossref","first-page":"361","DOI":"10.1038\/s41566-021-00774-2","article-title":"Minsted fluorescence localization and nanoscopy","volume":"15","author":"Weber","year":"2021","journal-title":"Nat. Photonics"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1400","doi-asserted-by":"crossref","first-page":"152","DOI":"10.1128\/mr.56.1.152-179.1992","article-title":"Evolution and ecology of influenza A viruses","volume":"56","author":"Webster","year":"1992","journal-title":"Microbiol. Rev."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1405","doi-asserted-by":"crossref","first-page":"1090","DOI":"10.1038\/s41592-018-0216-7","article-title":"Content-aware image restoration: pushing the limits of fluorescence microscopy","volume":"15","author":"Weigert","year":"2018","journal-title":"Nat. Methods"},{"issue":"Pt. 4","key":"10.1016\/bs.aivir.2023.05.002_bb1410","doi-asserted-by":"crossref","first-page":"945","DOI":"10.1099\/0022-1317-75-4-945","article-title":"Role of virion M2 protein in influenza virus uncoating: specific reduction in the rate of membrane fusion between virus and liposomes by amantadine","volume":"75","author":"Wharton","year":"1994","journal-title":"J. Gen. Virol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1415","doi-asserted-by":"crossref","first-page":"7924","DOI":"10.1038\/srep07924","article-title":"Image artifacts in single molecule localization microscopy: why optimization of sample preparation protocols matters","volume":"5","author":"Whelan","year":"2015","journal-title":"Sci. Rep."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1420","doi-asserted-by":"crossref","first-page":"9377","DOI":"10.1002\/anie.201204538","article-title":"Efficient N-terminal labeling of proteins by use of sortase","volume":"51","author":"Williamson","year":"2012","journal-title":"Angew. Chem. Int. Ed."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1425","doi-asserted-by":"crossref","first-page":"1395","DOI":"10.1126\/science.abd3629","article-title":"A molecular pore spans the double membrane of the coronavirus replication organelle","volume":"369","author":"Wolff","year":"2020","journal-title":"Science"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1430","doi-asserted-by":"crossref","first-page":"1022","DOI":"10.1016\/j.tim.2020.05.009","article-title":"Double-membrane vesicles as platforms for viral replication","volume":"28","author":"Wolff","year":"2020","journal-title":"Trends Microbiol."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1435","doi-asserted-by":"crossref","first-page":"1260","DOI":"10.1126\/science.abb2507","article-title":"Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation","volume":"367","author":"Wrapp","year":"2020","journal-title":"Science"},{"issue":"9","key":"10.1016\/bs.aivir.2023.05.002_bb1440","doi-asserted-by":"crossref","DOI":"10.3390\/v12091053","article-title":"Structural biology of influenza hemagglutinin: an amaranthine adventure","volume":"12","author":"Wu","year":"2020","journal-title":"Viruses"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1445","doi-asserted-by":"crossref","first-page":"2717","DOI":"10.1093\/emboj\/cdg279","article-title":"Caspase 3 activation is essential for efficient influenza virus propagation","volume":"22","author":"Wurzer","year":"2003","journal-title":"EMBO J."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1450","doi-asserted-by":"crossref","first-page":"343","DOI":"10.1038\/s41422-020-0305-x","article-title":"Inhibition of SARS-CoV-2 (previously 2019-nCoV) infection by a highly potent pan-coronavirus fusion inhibitor targeting its spike protein that harbors a high capacity to mediate membrane fusion","volume":"30","author":"Xia","year":"2020","journal-title":"Cell Res."},{"issue":"6","key":"10.1016\/bs.aivir.2023.05.002_bb1455","doi-asserted-by":"crossref","DOI":"10.1128\/mSphereDirect.00599-18","article-title":"Label-free digital holo-tomographic microscopy reveals virus-induced cytopathic effects in live cells","volume":"3","author":"Yakimovich","year":"2018","journal-title":"Msphere"},{"key":"10.1016\/bs.aivir.2023.05.002_bb1460","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/bs.aivir.2020.01.001","article-title":"Influenza A virus uncoating","volume":"106","author":"Yamauchi","year":"2020","journal-title":"Adv. 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Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1495","doi-asserted-by":"crossref","first-page":"E4238","DOI":"10.1073\/pnas.1315068110","article-title":"Isolation and characterization of the positive-sense replicative intermediate of a negative-strand RNA virus","volume":"110","author":"York","year":"2013","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1500","doi-asserted-by":"crossref","first-page":"3817","DOI":"10.1096\/fj.15-270421","article-title":"Generation and characterization of a trackable plant-made influenza H5 virus-like particle (VLP) containing enhanced green fluorescent protein (eGFP)","volume":"29","author":"Young","year":"2015","journal-title":"FASEB J."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1505","doi-asserted-by":"crossref","first-page":"5624","DOI":"10.1021\/acs.analchem.1c05387","article-title":"Uncovering the F-actin-based nuclear egress mechanism of newly synthesized influenza A virus ribonucleoprotein complexes by single-particle tracking","volume":"94","author":"Yu","year":"2022","journal-title":"Anal. Chem."},{"key":"10.1016\/bs.aivir.2023.05.002_bb1510","doi-asserted-by":"crossref","first-page":"529","DOI":"10.3390\/v13030529","article-title":"Light sheet microscopy-assisted 3D analysis of SARS-CoV-2 infection in the respiratory tract of the ferret model","volume":"13","author":"Zaeck","year":"2021","journal-title":"Viruses"},{"issue":"47","key":"10.1016\/bs.aivir.2023.05.002_bb1515","doi-asserted-by":"crossref","DOI":"10.1126\/sciimmunol.abc3582","article-title":"TMPRSS2 and TMPRSS4 promote SARS-CoV-2 infection of human small intestinal enterocytes","volume":"5","author":"Zang","year":"2020","journal-title":"Sci. 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