{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,24]],"date-time":"2026-10-24T04:00:44Z","timestamp":1792814444946,"version":"4.5.0"},"reference-count":58,"publisher":"Elsevier BV","issue":"12","license":[{"start":{"date-parts":[[2022,12,1]],"date-time":"2022-12-01T00:00:00Z","timestamp":1669852800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2022,12,1]],"date-time":"2022-12-01T00:00:00Z","timestamp":1669852800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2022,11,28]],"date-time":"2022-11-28T00:00:00Z","timestamp":1669593600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0\/"}],"funder":[{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R01 GM126553"],"award-info":[{"award-number":["R01 GM126553"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R01 HG011883"],"award-info":[{"award-number":["R01 HG011883"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100006483","name":"AbbVie","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100006483","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100007234","name":"University of Chicago","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100007234","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100014008","name":"Ovarian Cancer Research Alliance","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100014008","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100014989","name":"Chan Zuckerberg Initiative","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100014989","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["2016307"],"award-info":[{"award-number":["2016307"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["DP2AI158157"],"award-info":[{"award-number":["DP2AI158157"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["R35CA264619"],"award-info":[{"award-number":["R35CA264619"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["RO1CA211916"],"award-info":[{"award-number":["RO1CA211916"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["RO1CA237029"],"award-info":[{"award-number":["RO1CA237029"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["cell.com","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Cell Reports"],"published-print":{"date-parts":[[2022,12]]},"DOI":"10.1016\/j.celrep.2022.111838","type":"journal-article","created":{"date-parts":[[2022,12,20]],"date-time":"2022-12-20T10:56:42Z","timestamp":1671533802000},"page":"111838","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":85,"title":["A molecular atlas of the human postmenopausal fallopian tube and ovary from single-cell RNA and ATAC sequencing"],"prefix":"10.1016","volume":"41","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-8624-1507","authenticated-orcid":false,"given":"Ernst","family":"Lengyel","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yan","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Melanie","family":"Weigert","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lisha","family":"Zhu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Heather","family":"Eckart","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Melissa","family":"Javellana","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sarah","family":"Ackroyd","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jason","family":"Xiao","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Susan","family":"Olalekan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dianne","family":"Glass","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shilpa","family":"Iyer","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rahul","family":"Krishnan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Agnes Julia","family":"Bilecz","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ricardo","family":"Lastra","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mengjie","family":"Chen","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9468-3727","authenticated-orcid":false,"given":"Anindita","family":"Basu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.celrep.2022.111838_bib1","series-title":"Atlas of Tumor Pathology, Tumors of the Ovary, Maldeveloped Gonads, Fallopian Tube, and Broad Ligament","author":"Scully","year":"1998"},{"key":"10.1016\/j.celrep.2022.111838_bib2","doi-asserted-by":"crossref","first-page":"581","DOI":"10.1097\/PGP.0000000000000095","article-title":"Characterization of the immune cell repertoire in the normal fallopian tube","volume":"33","author":"Ardighieri","year":"2014","journal-title":"Int. J. Gynecol. Pathol."},{"key":"10.1016\/j.celrep.2022.111838_bib3","doi-asserted-by":"crossref","first-page":"108","DOI":"10.1097\/AOG.0000000000004173","article-title":"Updates and new options in advanced epithelial ovarian cancer treatment","volume":"137","author":"Kurnit","year":"2021","journal-title":"Obstet. Gynecol."},{"key":"10.1016\/j.celrep.2022.111838_bib4","doi-asserted-by":"crossref","first-page":"426","DOI":"10.1016\/j.ygyno.2018.11.033","article-title":"The fallopian tube, \"precursor escape\" and narrowing the knowledge gap to the origins of high-grade serous carcinoma","volume":"152","author":"Soong","year":"2019","journal-title":"Gynecol. Oncol."},{"key":"10.1016\/j.celrep.2022.111838_bib5","doi-asserted-by":"crossref","first-page":"1053","DOI":"10.2353\/ajpath.2010.100105","article-title":"Ovarian cancer development and metastasis","volume":"177","author":"Lengyel","year":"2010","journal-title":"Am. J. Pathol."},{"key":"10.1016\/j.celrep.2022.111838_bib6","doi-asserted-by":"crossref","first-page":"914","DOI":"10.1016\/j.devcel.2022.02.017","article-title":"Cellular heterogeneity of human fallopian tubes in normal and hydrosalpinx disease states identified using scRNA-seq","volume":"57","author":"Ulrich","year":"2022","journal-title":"Dev. Cell"},{"key":"10.1016\/j.celrep.2022.111838_bib7","doi-asserted-by":"crossref","first-page":"108978","DOI":"10.1016\/j.celrep.2021.108978","article-title":"Single-cell transcriptomics identifies gene expression networks driving differentiation and tumorigenesis in the human fallopian tube","volume":"35","author":"Dinh","year":"2021","journal-title":"Cell Rep."},{"key":"10.1016\/j.celrep.2022.111838_bib8","series-title":"HIPPO: Heterogeneity-Induced Pre-processing Tool","author":"Kim","year":"2021"},{"key":"10.1016\/j.celrep.2022.111838_bib9","doi-asserted-by":"crossref","first-page":"213","DOI":"10.1038\/s41590-018-0045-y","article-title":"Metabolic exhaustion in infection, cancer and autoimmunity","volume":"19","author":"McKinney","year":"2018","journal-title":"Nat. Immunol."},{"key":"10.1016\/j.celrep.2022.111838_bib10","doi-asserted-by":"crossref","first-page":"12","DOI":"10.1016\/j.fertnstert.2012.11.029","article-title":"The aging ovary--the poor granulosa cells","volume":"99","author":"Tatone","year":"2013","journal-title":"Fertil. Steril."},{"key":"10.1016\/j.celrep.2022.111838_bib11","doi-asserted-by":"crossref","first-page":"226","DOI":"10.1016\/j.ccell.2020.01.003","article-title":"The repertoire of serous ovarian cancer non-genetic heterogeneity revealed by single-cell sequencing of normal fallopian tube epithelial cells","volume":"37","author":"Hu","year":"2020","journal-title":"Cancer Cell"},{"key":"10.1016\/j.celrep.2022.111838_bib12","doi-asserted-by":"crossref","first-page":"e0206785","DOI":"10.1371\/journal.pone.0206785","article-title":"Identification of grade and origin specific cell populations in serous epithelial ovarian cancer by single cell\u00a0RNA-seq","volume":"13","author":"Shih","year":"2018","journal-title":"PLoS One"},{"key":"10.1016\/j.celrep.2022.111838_bib13","doi-asserted-by":"crossref","first-page":"1249","DOI":"10.1007\/s00439-015-1598-6","article-title":"A genome-wide association study for colorectal cancer identifies a risk locus in 14q23.1","volume":"134","author":"Lemire","year":"2015","journal-title":"Hum. Genet."},{"key":"10.1016\/j.celrep.2022.111838_bib14","doi-asserted-by":"crossref","first-page":"619","DOI":"10.1038\/s41586-020-2922-4","article-title":"A molecular cell atlas of the human lung from single-cell RNA sequencing","volume":"587","author":"Travaglini","year":"2020","journal-title":"Nature"},{"key":"10.1016\/j.celrep.2022.111838_bib15","doi-asserted-by":"crossref","first-page":"41","DOI":"10.1002\/path.5219","article-title":"Genomic landscape and evolutionary trajectories of ovarian cancer early precursor lesions","volume":"248","author":"Wu","year":"2019","journal-title":"J.\u00a0Pathol."},{"key":"10.1016\/j.celrep.2022.111838_bib16","doi-asserted-by":"crossref","first-page":"1342","DOI":"10.1158\/2159-8290.CD-16-0607","article-title":"Genomics of ovarian cancer progression reveals diverse metastatic trajectories including intraepithelial metastasis to the fallopian tube","volume":"6","author":"Eckert","year":"2016","journal-title":"Cancer Discov."},{"key":"10.1016\/j.celrep.2022.111838_bib17","doi-asserted-by":"crossref","first-page":"385","DOI":"10.1016\/S1470-2045(11)70404-1","article-title":"Association between endometriosis and risk of histological subtypes of ovarian cancer: a pooled analysis of case-control studies","volume":"13","author":"Pearce","year":"2012","journal-title":"Lancet Oncol."},{"key":"10.1016\/j.celrep.2022.111838_bib18","doi-asserted-by":"crossref","first-page":"2512","DOI":"10.3390\/ijms19092512","article-title":"Exploring the role of fallopian ciliated cells in the pathogenesis of high-grade serous ovarian cancer","volume":"19","author":"Coan","year":"2018","journal-title":"Int. J. Mol. Sci."},{"key":"10.1016\/j.celrep.2022.111838_bib19","doi-asserted-by":"crossref","first-page":"3752871","DOI":"10.1155\/2021\/3752871","article-title":"Downregulation of the coiled-coil domain containing 80 and its perspective mechanisms in ovarian carcinoma: a Comprehensive Study","volume":"2021","author":"Liang","year":"2021","journal-title":"Int. J. Genomics"},{"key":"10.1016\/j.celrep.2022.111838_bib20","doi-asserted-by":"crossref","first-page":"535","DOI":"10.1016\/j.canlet.2014.12.010","article-title":"The cl2\/dro1\/ccdc80 null mice develop thyroid and ovarian neoplasias","volume":"357","author":"Leone","year":"2015","journal-title":"Cancer Lett."},{"key":"10.1016\/j.celrep.2022.111838_bib21","doi-asserted-by":"crossref","first-page":"1244","DOI":"10.1056\/NEJMra1810764","volume":"382","author":"Zondervan","year":"2020","journal-title":"N.\u00a0Engl. J. Med."},{"key":"10.1016\/j.celrep.2022.111838_bib22","doi-asserted-by":"crossref","first-page":"1484","DOI":"10.1038\/s41596-020-0292-x","article-title":"CellPhoneDB: inferring cell-cell communication from combined expression of multi-subunit ligand-receptor complexes","volume":"15","author":"Efremova","year":"2020","journal-title":"Nat. Protoc."},{"key":"10.1016\/j.celrep.2022.111838_bib23","doi-asserted-by":"crossref","first-page":"5533","DOI":"10.4049\/jimmunol.1201161","article-title":"Macrophage migration inhibitory factor promotes tumor growth and metastasis by inducing myeloid-derived suppressor cells in the tumor microenvironment","volume":"189","author":"Simpson","year":"2012","journal-title":"J.\u00a0Immunol."},{"key":"10.1016\/j.celrep.2022.111838_bib24","doi-asserted-by":"crossref","first-page":"e3000599","DOI":"10.1371\/journal.pbio.3000599","article-title":"A proteomic atlas of senescence-associated secretomes for aging biomarker development","volume":"18","author":"Basisty","year":"2020","journal-title":"PLoS Biol."},{"key":"10.1016\/j.celrep.2022.111838_bib25","doi-asserted-by":"crossref","first-page":"94","DOI":"10.1186\/s13059-020-02008-0","article-title":"scATAC-pro: a comprehensive workbench for single-cell chromatin accessibility sequencing data","volume":"21","author":"Yu","year":"2020","journal-title":"Genome Biol."},{"key":"10.1016\/j.celrep.2022.111838_bib26","doi-asserted-by":"crossref","first-page":"2190","DOI":"10.1038\/s41467-021-22368-w","article-title":"Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney","volume":"12","author":"Muto","year":"2021","journal-title":"Nat. Commun."},{"key":"10.1016\/j.celrep.2022.111838_bib27","doi-asserted-by":"crossref","first-page":"108273","DOI":"10.1016\/j.celrep.2020.108273","article-title":"Integrated single-cell transcriptomics and chromatin accessibility analysis reveals regulators of mammary epithelial cell identity","volume":"33","author":"Pervolarakis","year":"2020","journal-title":"Cell Rep."},{"key":"10.1016\/j.celrep.2022.111838_bib28","doi-asserted-by":"crossref","first-page":"4924","DOI":"10.1016\/j.molcel.2021.10.013","article-title":"A multi-omic single-cell landscape of human gynecologic malignancies","volume":"81","author":"Regner","year":"2021","journal-title":"Mol. Cell"},{"key":"10.1016\/j.celrep.2022.111838_bib29","doi-asserted-by":"crossref","first-page":"1289","DOI":"10.1038\/s41592-019-0619-0","article-title":"Fast, sensitive and accurate integration of single-cell data with Harmony","volume":"16","author":"Korsunsky","year":"2019","journal-title":"Nat. Methods"},{"key":"10.1016\/j.celrep.2022.111838_bib30","doi-asserted-by":"crossref","first-page":"26","DOI":"10.1172\/JCI93555","article-title":"Fibroblast heterogeneity: implications for human disease","volume":"128","author":"Lynch","year":"2018","journal-title":"J.\u00a0Clin. Invest."},{"key":"10.1016\/j.celrep.2022.111838_bib31","doi-asserted-by":"crossref","first-page":"1431","DOI":"10.1016\/j.cell.2014.08.009","article-title":"Determination and inference of eukaryotic transcription factor sequence\u00a0specificity","volume":"158","author":"Weirauch","year":"2014","journal-title":"Cell"},{"key":"10.1016\/j.celrep.2022.111838_bib32","doi-asserted-by":"crossref","first-page":"713294","DOI":"10.3389\/fimmu.2021.713294","article-title":"ZBTB transcription factors: key regulators of the development, differentiation and effector function of T\u00a0cells","volume":"12","author":"Cheng","year":"2021","journal-title":"Front. Immunol."},{"key":"10.1016\/j.celrep.2022.111838_bib33","doi-asserted-by":"crossref","first-page":"E3911","DOI":"10.1073\/pnas.1606297113","article-title":"YY1 plays an essential role at all stages of B-cell differentiation","volume":"113","author":"Kleiman","year":"2016","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.celrep.2022.111838_bib34","doi-asserted-by":"crossref","first-page":"2057","DOI":"10.1158\/0008-5472.CAN-21-3371","article-title":"Forkhead box transcription factors: double-edged swords in cancer","volume":"82","author":"Castaneda","year":"2022","journal-title":"Cancer Res."},{"key":"10.1016\/j.celrep.2022.111838_bib35","doi-asserted-by":"crossref","first-page":"13","DOI":"10.1007\/s12012-018-9493-8","article-title":"Endothelial cells: from dysfunction mechanism to pharmacological effect in cardiovascular disease","volume":"19","author":"Haybar","year":"2019","journal-title":"Cardiovasc. Toxicol."},{"key":"10.1016\/j.celrep.2022.111838_bib36","doi-asserted-by":"crossref","first-page":"23176","DOI":"10.1074\/jbc.271.38.23176","article-title":"Requirement of an upstream AP-1 motif for the constitutive and phorbol ester-inducible expression of the urokinase-type plasminogen activator receptor gene","volume":"271","author":"Lengyel","year":"1996","journal-title":"J.\u00a0Biol. Chem."},{"key":"10.1016\/j.celrep.2022.111838_bib37","doi-asserted-by":"crossref","first-page":"169","DOI":"10.1158\/0008-5472.CAN-21-1467","article-title":"Neoadjuvant chemotherapy induces genomic and transcriptomic changes in ovarian cancer","volume":"82","author":"Javellana","year":"2022","journal-title":"Cancer Res."},{"key":"10.1016\/j.celrep.2022.111838_bib38","doi-asserted-by":"crossref","first-page":"30","DOI":"10.3389\/fcvm.2019.00030","article-title":"SOX transcription factors in endothelial differentiation and endothelial-mesenchymal transitions","volume":"6","author":"Yao","year":"2019","journal-title":"Front. Cardiovasc. Med."},{"key":"10.1016\/j.celrep.2022.111838_bib39","doi-asserted-by":"crossref","first-page":"4471","DOI":"10.1007\/s00018-017-2587-9","article-title":"Epithelial cell senescence: an adaptive response to pre-carcinogenic stresses?","volume":"74","author":"Abbadie","year":"2017","journal-title":"Cell. Mol. Life Sci."},{"key":"10.1016\/j.celrep.2022.111838_bib40","doi-asserted-by":"crossref","first-page":"1212","DOI":"10.1016\/j.fertnstert.2009.06.039","article-title":"The molecular signature of endometriosis-associated endometroid ovarian cancer differs significantly from endometriosis-independent endometroid ovarian cancer","volume":"94","author":"Banz","year":"2010","journal-title":"Fertil. Steril."},{"key":"10.1016\/j.celrep.2022.111838_bib41","doi-asserted-by":"crossref","first-page":"1681","DOI":"10.1016\/j.fertnstert.2014.02.007","article-title":"Elevated expression of CD147 in patients with endometriosis and its role in regulating apoptosis and migration of human endometrial cells","volume":"101","author":"Jin","year":"2014","journal-title":"Fertil. Steril."},{"key":"10.1016\/j.celrep.2022.111838_bib42","doi-asserted-by":"crossref","first-page":"E955","DOI":"10.1210\/jc.2015-1431","article-title":"Up-regulation of Bcl-2 by CD147 through ERK activation results in abnormal cell survival in human endometriosis","volume":"100","author":"Wang","year":"2015","journal-title":"J.\u00a0Clin. Endocrinol. Metab."},{"key":"10.1016\/j.celrep.2022.111838_bib43","doi-asserted-by":"crossref","first-page":"3343","DOI":"10.3390\/cancers13133343","article-title":"Identification of a novel tumor microenvironment prognostic signature for advanced-stage serous ovarian cancer","volume":"13","author":"Zheng","year":"2021","journal-title":"Cancers"},{"key":"10.1016\/j.celrep.2022.111838_bib44","doi-asserted-by":"crossref","first-page":"10","DOI":"10.1158\/0008-5472.CAN-15-1382","article-title":"It's totally tubular Riding the new wave of ovarian cancer research","volume":"76","author":"Perets","year":"2016","journal-title":"Cancer Res."},{"key":"10.1016\/j.celrep.2022.111838_bib45","doi-asserted-by":"crossref","first-page":"585","DOI":"10.1016\/j.cell.2020.01.009","article-title":"Single-cell transcriptomic atlas of primate ovarian aging","volume":"180","author":"Wang","year":"2020","journal-title":"Cell"},{"key":"10.1016\/j.celrep.2022.111838_bib46","doi-asserted-by":"crossref","first-page":"296","DOI":"10.1111\/j.1749-6632.2001.tb03811.x","article-title":"Role of exogenous and endogenous hormones in endometrial cancer: Review of the evidence and research perspectives","volume":"943","author":"Akhmedkhanov","year":"2001","journal-title":"Ann. N. Y. Acad. Sci."},{"key":"10.1016\/j.celrep.2022.111838_bib47","first-page":"D87","article-title":"JASPAR 2020: update of the open-access database of transcription factor binding profiles","volume":"48","author":"Fornes","year":"2020","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.celrep.2022.111838_bib48","doi-asserted-by":"crossref","first-page":"1718","DOI":"10.1016\/j.celrep.2019.09.082","article-title":"DoubletDecon: deconvoluting doublets from single-cell RNA-sequencing data","volume":"29","author":"DePasquale","year":"2019","journal-title":"Cell Rep."},{"key":"10.1016\/j.celrep.2022.111838_bib49","doi-asserted-by":"crossref","first-page":"1888","DOI":"10.1016\/j.cell.2019.05.031","article-title":"Comprehensive integration of single-cell data","volume":"177","author":"Stuart","year":"2019","journal-title":"Cell"},{"key":"10.1016\/j.celrep.2022.111838_bib50","doi-asserted-by":"crossref","first-page":"3573","DOI":"10.1016\/j.cell.2021.04.048","article-title":"Integrated analysis of multimodal single-cell data","volume":"184","author":"Hao","year":"2021","journal-title":"Cell"},{"key":"10.1016\/j.celrep.2022.111838_bib51","doi-asserted-by":"crossref","first-page":"975","DOI":"10.1038\/nmeth.4401","article-title":"ChromVAR: inferring transcription-factor-associated accessibility from single-cell epigenomic data","volume":"14","author":"Schep","year":"2017","journal-title":"Nat. Methods"},{"key":"10.1016\/j.celrep.2022.111838_bib52","doi-asserted-by":"crossref","first-page":"271","DOI":"10.1016\/j.ajpath.2013.09.017","article-title":"Expression of the homeobox gene HOXA9 in ovarian cancer induces peritoneal macrophages to acquire an M2 tumor-promoting phenotype","volume":"184","author":"Ko","year":"2014","journal-title":"Am. J. Pathol."},{"key":"10.1016\/j.celrep.2022.111838_bib53","series-title":"Human Fallopian Tube and Ovary Dissociation for Single Cell RNA-Seq","author":"Javellana","year":"2019"},{"key":"10.1016\/j.celrep.2022.111838_bib54","doi-asserted-by":"crossref","first-page":"1755","DOI":"10.1038\/nprot.2012.097","article-title":"Primary culture and immortalization of human fallopian tube secretory epithelial cells","volume":"7","author":"Karst","year":"2012","journal-title":"Nat. Protoc."},{"key":"10.1016\/j.celrep.2022.111838_bib55","doi-asserted-by":"crossref","first-page":"1202","DOI":"10.1016\/j.cell.2015.05.002","article-title":"Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets","volume":"161","author":"Macosko","year":"2015","journal-title":"Cell"},{"key":"10.1016\/j.celrep.2022.111838_bib56","doi-asserted-by":"crossref","first-page":"14049","DOI":"10.1038\/ncomms14049","article-title":"Massively parallel digital transcriptional profiling of single cells","volume":"8","author":"Zheng","year":"2017","journal-title":"Nat. Commun."},{"key":"10.1016\/j.celrep.2022.111838_bib57","doi-asserted-by":"crossref","first-page":"296","DOI":"10.1186\/s13059-019-1874-1","article-title":"Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression","volume":"20","author":"Hafemeister","year":"2019","journal-title":"Genome Biol."},{"key":"10.1016\/j.celrep.2022.111838_bib58","doi-asserted-by":"crossref","first-page":"411","DOI":"10.1038\/nbt.4096","article-title":"Integrating single-cell transcriptomic data across different conditions, technologies, and species","volume":"36","author":"Butler","year":"2018","journal-title":"Nat. Biotechnol."}],"container-title":["Cell Reports"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2211124722017302?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2211124722017302?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,10,31]],"date-time":"2025-10-31T11:55:30Z","timestamp":1761911730000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S2211124722017302"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2022,12]]},"references-count":58,"journal-issue":{"issue":"12","published-print":{"date-parts":[[2022,12]]}},"alternative-id":["S2211124722017302"],"URL":"https:\/\/doi.org\/10.1016\/j.celrep.2022.111838","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2022.08.04.502826","asserted-by":"object"}]},"ISSN":["2211-1247"],"issn-type":[{"value":"2211-1247","type":"print"}],"subject":[],"published":{"date-parts":[[2022,12]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"A molecular atlas of the human postmenopausal fallopian tube and ovary from single-cell RNA and ATAC sequencing","name":"articletitle","label":"Article Title"},{"value":"Cell Reports","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.celrep.2022.111838","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2022 The Author(s).","name":"copyright","label":"Copyright"}],"article-number":"111838"}}