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J. Pharm."},{"key":"10.1016\/j.chom.2023.08.018_bib68","doi-asserted-by":"crossref","first-page":"3228","DOI":"10.1128\/IAI.73.6.3228-3241.2005","article-title":"Comparison of Salmonella enterica serovar Typhimurium colitis in germfree mice and mice pretreated with streptomycin","volume":"73","author":"Stecher","year":"2005","journal-title":"Infect. 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