{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,24]],"date-time":"2026-10-24T15:28:30Z","timestamp":1792855710905,"version":"4.5.0"},"reference-count":65,"publisher":"Elsevier BV","issue":"6","license":[{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"funder":[{"DOI":"10.13039\/501100012449","name":"Southern University of Science and Technology","doi-asserted-by":"publisher","award":["WCS365-LUC"],"award-info":[{"award-number":["WCS365-LUC"]}],"id":[{"id":"10.13039\/501100012449","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["NSFC32030018"],"award-info":[{"award-number":["NSFC32030018"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100008996","name":"Capital Normal University","doi-asserted-by":"publisher","award":["myc2\/3\/4"],"award-info":[{"award-number":["myc2\/3\/4"]}],"id":[{"id":"10.13039\/100008996","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100011190","name":"Kunming Institute of Botany, Chinese Academy of Sciences","doi-asserted-by":"publisher","award":["MYC2-FLAG"],"award-info":[{"award-number":["MYC2-FLAG"]}],"id":[{"id":"10.13039\/501100011190","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["cell.com","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Cell Host & Microbe"],"published-print":{"date-parts":[[2025,6]]},"DOI":"10.1016\/j.chom.2025.04.019","type":"journal-article","created":{"date-parts":[[2025,5,21]],"date-time":"2025-05-21T10:36:08Z","timestamp":1747823768000},"page":"973-987.e4","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":25,"title":["Rhizosphere microbes mitigate the shade avoidance responses in Arabidopsis"],"prefix":"10.1016","volume":"33","author":[{"given":"Huanhuan","family":"Lu","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Caiyi","family":"Lu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sha","family":"Huang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wenbo","family":"Liu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Like","family":"Wang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chuanwei","family":"Yang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5178-3530","authenticated-orcid":false,"given":"Ertao","family":"Wang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4840-5245","authenticated-orcid":false,"given":"Lin","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.chom.2025.04.019_bib1","doi-asserted-by":"crossref","DOI":"10.1199\/tab.0157","article-title":"Shade avoidance","volume":"10","author":"Casal","year":"2012","journal-title":"Arabidopsis Book"},{"key":"10.1016\/j.chom.2025.04.019_bib2","doi-asserted-by":"crossref","first-page":"1475","DOI":"10.1093\/plphys\/kiad004","article-title":"Shade avoidance in the context of climate change","volume":"191","author":"Casal","year":"2023","journal-title":"Plant Physiol."},{"key":"10.1016\/j.chom.2025.04.019_bib3","doi-asserted-by":"crossref","DOI":"10.1093\/aobpla\/plx039","article-title":"Reducing shade avoidance responses in a cereal crop","volume":"9","author":"Wille","year":"2017","journal-title":"AoB Plants"},{"key":"10.1016\/j.chom.2025.04.019_bib4","doi-asserted-by":"crossref","first-page":"1244","DOI":"10.1016\/S2095-3119(16)61434-X","article-title":"The molecular mechanism of shade avoidance in crops \u2013 How data from Arabidopsis can help to identify targets for increasing yield and biomass production","volume":"16","author":"Tang","year":"2017","journal-title":"J. Integr. Agric."},{"key":"10.1016\/j.chom.2025.04.019_bib5","doi-asserted-by":"crossref","first-page":"513","DOI":"10.1146\/annurev-arplant-043015-112252","article-title":"Light-Mediated Hormonal Regulation of Plant Growth and Development","volume":"67","author":"de Wit","year":"2016","journal-title":"Annu. Rev. Plant Biol."},{"key":"10.1016\/j.chom.2025.04.019_bib6","doi-asserted-by":"crossref","first-page":"3893","DOI":"10.1038\/emboj.2009.306","article-title":"Inhibition of the shade avoidance response by formation of non-DNA binding bHLH heterodimers","volume":"28","author":"Hornitschek","year":"2009","journal-title":"EMBO J."},{"key":"10.1016\/j.chom.2025.04.019_bib7","doi-asserted-by":"crossref","first-page":"344","DOI":"10.1016\/j.celrep.2016.12.046","article-title":"DET1 and HY5 Control PIF4-Mediated Thermosensory Elongation Growth through Distinct Mechanisms","volume":"18","author":"Gangappa","year":"2017","journal-title":"Cell Rep."},{"key":"10.1016\/j.chom.2025.04.019_bib8","doi-asserted-by":"crossref","first-page":"335","DOI":"10.1146\/annurev-arplant-050213-040145","article-title":"Light regulation of plant defense","volume":"65","author":"Ballar\u00e9","year":"2014","journal-title":"Annu. Rev. Plant Biol."},{"key":"10.1016\/j.chom.2025.04.019_bib9","doi-asserted-by":"crossref","first-page":"223","DOI":"10.1038\/s41477-020-0604-8","article-title":"A light-dependent molecular link between competition cues and defence responses in plants","volume":"6","author":"Fern\u00e1ndez-Milmanda","year":"2020","journal-title":"Nat. Plants"},{"key":"10.1016\/j.chom.2025.04.019_bib10","doi-asserted-by":"crossref","first-page":"1967","DOI":"10.1105\/tpc.114.125047","article-title":"Repression of Jasmonate-Dependent Defenses by Shade Involves Differential Regulation of Protein Stability of MYC Transcription Factors and Their JAZ Repressors in Arabidopsis","volume":"26","author":"Chico","year":"2014","journal-title":"Plant Cell"},{"key":"10.1016\/j.chom.2025.04.019_bib11","doi-asserted-by":"crossref","first-page":"355","DOI":"10.1111\/nph.12971","article-title":"To grow or defend? Low red:far-red ratios reduce jasmonate sensitivity in Arabidopsis seedlings by promoting DELLA degradation and increasing JAZ10 stability","volume":"204","author":"Leone","year":"2014","journal-title":"New Phytol."},{"key":"10.1016\/j.chom.2025.04.019_bib12","doi-asserted-by":"crossref","first-page":"1797","DOI":"10.1534\/g3.120.401188","article-title":"MYCs and PIFs Act Independently in Arabidopsis Growth Regulation","volume":"10","author":"Li","year":"2020","journal-title":"G3 (Bethesda)"},{"key":"10.1016\/j.chom.2025.04.019_bib13","doi-asserted-by":"crossref","first-page":"2089","DOI":"10.1105\/tpc.18.00991","article-title":"Arabidopsis FHY3 and FAR1 Regulate the Balance between Growth and Defense Responses under Shade Conditions","volume":"31","author":"Liu","year":"2019","journal-title":"Plant Cell"},{"key":"10.1016\/j.chom.2025.04.019_bib14","doi-asserted-by":"crossref","first-page":"1720","DOI":"10.1104\/pp.18.00920","article-title":"Network Analysis Reveals a Role for Salicylic Acid Pathway Components in Shade Avoidance","volume":"178","author":"Nozue","year":"2018","journal-title":"Plant Physiol."},{"key":"10.1016\/j.chom.2025.04.019_bib15","doi-asserted-by":"crossref","first-page":"607","DOI":"10.1038\/s41579-020-0412-1","article-title":"Plant-microbiome interactions: from community assembly to plant health","volume":"18","author":"Trivedi","year":"2020","journal-title":"Nat. Rev. Microbiol."},{"key":"10.1016\/j.chom.2025.04.019_bib16","doi-asserted-by":"crossref","first-page":"1078","DOI":"10.1038\/s41477-021-00956-4","article-title":"A microbiota-root-shoot circuit favours Arabidopsis growth over defence under suboptimal light","volume":"7","author":"Hou","year":"2021","journal-title":"Nat. Plants"},{"key":"10.1016\/j.chom.2025.04.019_bib17","doi-asserted-by":"crossref","first-page":"230","DOI":"10.1111\/jipb.13226","article-title":"The root microbiome: Community assembly and its contributions to plant fitness","volume":"64","author":"Bai","year":"2022","journal-title":"J. Integr. Plant Biol."},{"key":"10.1016\/j.chom.2025.04.019_bib18","doi-asserted-by":"crossref","first-page":"270","DOI":"10.1126\/science.aaz5192","article-title":"Harnessing rhizosphere microbiomes for drought-resilient crop production","volume":"368","author":"de Vries","year":"2020","journal-title":"Science"},{"key":"10.1016\/j.chom.2025.04.019_bib19","doi-asserted-by":"crossref","first-page":"1582","DOI":"10.1093\/mp\/ssu068","article-title":"PIL1 Participates in a Negative Feedback Loop that Regulates Its Own Gene Expression in Response to Shade","volume":"7","author":"Li","year":"2014","journal-title":"Mol. Plant"},{"key":"10.1016\/j.chom.2025.04.019_bib20","doi-asserted-by":"crossref","first-page":"364","DOI":"10.1038\/nature16192","article-title":"Functional overlap of the Arabidopsis leaf and root microbiota","volume":"528","author":"Bai","year":"2015","journal-title":"Nature"},{"key":"10.1016\/j.chom.2025.04.019_bib21","doi-asserted-by":"crossref","first-page":"440","DOI":"10.1016\/j.cell.2020.01.013","article-title":"Co-incidence of Damage and Microbial Patterns Controls Localized Immune Responses in Roots","volume":"180","author":"Zhou","year":"2020","journal-title":"Cell"},{"key":"10.1016\/j.chom.2025.04.019_bib22","doi-asserted-by":"crossref","first-page":"814","DOI":"10.1038\/s41477-021-00920-2","article-title":"Coordination of microbe-host homeostasis by crosstalk with plant innate immunity","volume":"7","author":"Ma","year":"2021","journal-title":"Nat. Plants"},{"key":"10.1016\/j.chom.2025.04.019_bib23","doi-asserted-by":"crossref","DOI":"10.1073\/pnas.2100678118","article-title":"Specific modulation of the root immune system by a community of commensal bacteria","volume":"118","author":"Teixeira","year":"2021","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.chom.2025.04.019_bib24","doi-asserted-by":"crossref","first-page":"1507","DOI":"10.1016\/j.chom.2021.09.005","article-title":"Plant immune system activation is necessary for efficient root colonization by auxin-secreting beneficial bacteria","volume":"29","author":"Tzipilevich","year":"2021","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.chom.2025.04.019_bib25","doi-asserted-by":"crossref","first-page":"785","DOI":"10.1101\/gad.187849.112","article-title":"Linking photoreceptor excitation to changes in plant architecture","volume":"26","author":"Li","year":"2012","journal-title":"Genes Dev."},{"key":"10.1016\/j.chom.2025.04.019_bib26","doi-asserted-by":"crossref","first-page":"644","DOI":"10.1038\/s41477-021-00914-0","article-title":"FERONIA restricts Pseudomonas in the rhizosphere microbiome via regulation of reactive oxygen species","volume":"7","author":"Song","year":"2021","journal-title":"Nat. Plants"},{"key":"10.1016\/j.chom.2025.04.019_bib27","doi-asserted-by":"crossref","first-page":"1082","DOI":"10.1104\/pp.17.00695","article-title":"S5H\/DMR6 Encodes a Salicylic Acid 5-Hydroxylase That Fine-Tunes Salicylic Acid Homeostasis","volume":"175","author":"Zhang","year":"2017","journal-title":"Plant Physiol."},{"key":"10.1016\/j.chom.2025.04.019_bib28","doi-asserted-by":"crossref","first-page":"417","DOI":"10.1111\/j.1399-3054.2007.01041.x","article-title":"Metabolism of salicylic acid in wild-type, ugt74f1 and ugt74f2 glucosyltransferase mutants of Arabidopsis thaliana","volume":"132","author":"Dean","year":"2008","journal-title":"Physiol. Plant."},{"key":"10.1016\/j.chom.2025.04.019_bib29","doi-asserted-by":"crossref","DOI":"10.1038\/ncomms7043","article-title":"A fluorescent hormone biosensor reveals the dynamics of jasmonate signalling in plants","volume":"6","author":"Larrieu","year":"2015","journal-title":"Nat. Commun."},{"key":"10.1016\/j.chom.2025.04.019_bib30","doi-asserted-by":"crossref","first-page":"539","DOI":"10.1038\/nrg2812","article-title":"Plant immunity: towards an integrated view of plant-pathogen interactions","volume":"11","author":"Dodds","year":"2010","journal-title":"Nat. Rev. Genet."},{"key":"10.1016\/j.chom.2025.04.019_bib31","doi-asserted-by":"crossref","first-page":"764","DOI":"10.1038\/nature02485","article-title":"Bacterial disease resistance in Arabidopsis through flagellin perception","volume":"428","author":"Zipfel","year":"2004","journal-title":"Nature"},{"key":"10.1016\/j.chom.2025.04.019_bib32","doi-asserted-by":"crossref","first-page":"2440","DOI":"10.1105\/tpc.111.084301","article-title":"The Arabidopsis leucine-rich repeat receptor-like kinases BAK1\/SERK3 and BKK1\/SERK4 are required for innate immunity to hemibiotrophic and biotrophic pathogens","volume":"23","author":"Roux","year":"2011","journal-title":"Plant Cell"},{"key":"10.1016\/j.chom.2025.04.019_bib33","doi-asserted-by":"crossref","first-page":"323","DOI":"10.1038\/nature05286","article-title":"The plant immune system","volume":"444","author":"Jones","year":"2006","journal-title":"Nature"},{"key":"10.1016\/j.chom.2025.04.019_bib34","doi-asserted-by":"crossref","first-page":"105","DOI":"10.1038\/s41586-021-03316-6","article-title":"Pattern-recognition receptors are required for NLR-mediated plant immunity","volume":"592","author":"Yuan","year":"2021","journal-title":"Nature"},{"key":"10.1016\/j.chom.2025.04.019_bib35","doi-asserted-by":"crossref","DOI":"10.1016\/j.pbi.2021.102030","article-title":"PTI-ETI crosstalk: an integrative view of plant immunity","volume":"62","author":"Yuan","year":"2021","journal-title":"Curr. Opin. Plant Biol."},{"key":"10.1016\/j.chom.2025.04.019_bib36","doi-asserted-by":"crossref","first-page":"213","DOI":"10.1016\/S0092-8674(02)00812-7","article-title":"BAK1, an Arabidopsis LRR receptor-like protein kinase, interacts with BRI1 and modulates brassinosteroid signaling","volume":"110","author":"Li","year":"2002","journal-title":"Cell"},{"key":"10.1016\/j.chom.2025.04.019_bib37","doi-asserted-by":"crossref","DOI":"10.1038\/s41467-023-42618-3","article-title":"Shade-induced RTFL\/DVL peptides negatively regulate the shade response by directly interacting with BSKs in Arabidopsis","volume":"14","author":"Huang","year":"2023","journal-title":"Nat. Commun."},{"key":"10.1016\/j.chom.2025.04.019_bib38","doi-asserted-by":"crossref","DOI":"10.1038\/s41467-023-40364-0","article-title":"BIK1 protein homeostasis is maintained by the interplay of different ubiquitin ligases in immune signaling","volume":"14","author":"Bai","year":"2023","journal-title":"Nat. Commun."},{"key":"10.1016\/j.chom.2025.04.019_bib39","doi-asserted-by":"crossref","first-page":"2530","DOI":"10.1111\/pce.12914","article-title":"The shade-avoidance syndrome: multiple signals and ecological consequences","volume":"40","author":"Ballar\u00e9","year":"2017","journal-title":"Plant Cell Environ."},{"key":"10.1016\/j.chom.2025.04.019_bib40","doi-asserted-by":"crossref","DOI":"10.1038\/s41467-018-07343-2","article-title":"The structure and function of the global citrus rhizosphere microbiome","volume":"9","author":"Xu","year":"2018","journal-title":"Nat. Commun."},{"key":"10.1016\/j.chom.2025.04.019_bib41","doi-asserted-by":"crossref","DOI":"10.1126\/science.aau6389","article-title":"A specialized metabolic network selectively modulates Arabidopsis root microbiota","volume":"364","author":"Huang","year":"2019","journal-title":"Science"},{"key":"10.1016\/j.chom.2025.04.019_bib42","article-title":"Nonpathogenic Pseudomonas syringae derivatives and its metabolites trigger the plant \u201ccry for help\u201d response to assemble disease suppressing and growth promoting rhizomicrobiome","volume":"15","author":"Liu","year":"2024","journal-title":"Nat. Commun."},{"key":"10.1016\/j.chom.2025.04.019_bib43","doi-asserted-by":"crossref","first-page":"640","DOI":"10.1016\/j.cub.2015.12.066","article-title":"Shoot-to-Root Mobile Transcription Factor HY5 Coordinates Plant Carbon and Nitrogen Acquisition","volume":"26","author":"Chen","year":"2016","journal-title":"Curr. Biol."},{"key":"10.1016\/j.chom.2025.04.019_bib44","doi-asserted-by":"crossref","first-page":"653","DOI":"10.1038\/s41586-020-2185-0","article-title":"A plant genetic network for preventing dysbiosis in the phyllosphere","volume":"580","author":"Chen","year":"2020","journal-title":"Nature"},{"key":"10.1016\/j.chom.2025.04.019_bib45","doi-asserted-by":"crossref","first-page":"524","DOI":"10.1038\/nature20166","article-title":"Bacteria establish an aqueous living space in plants crucial for virulence","volume":"539","author":"Xin","year":"2016","journal-title":"Nature"},{"key":"10.1016\/j.chom.2025.04.019_bib46","doi-asserted-by":"crossref","first-page":"641","DOI":"10.1093\/jxb\/erq298","article-title":"BAK1 regulates the accumulation of jasmonic acid and the levels of trypsin proteinase inhibitors in Nicotiana attenuata\u2019s responses to herbivory","volume":"62","author":"Yang","year":"2011","journal-title":"J. Exp. Bot."},{"key":"10.1016\/j.chom.2025.04.019_bib47","article-title":"The OsBDR1-MPK3 module negatively regulates blast resistance by suppressing the jasmonate signaling and terpenoid biosynthesis pathway","volume":"120","author":"Wang","year":"2023","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.chom.2025.04.019_bib48","doi-asserted-by":"crossref","first-page":"253","DOI":"10.1111\/nph.14953","article-title":"Nonredundant functions of Arabidopsis LecRK-V.2 and LecRK-VII.1 in controlling stomatal immunity and jasmonate-mediated stomatal closure","volume":"218","author":"Yekondi","year":"2018","journal-title":"New Phytol."},{"key":"10.1016\/j.chom.2025.04.019_bib49","doi-asserted-by":"crossref","first-page":"763","DOI":"10.1111\/j.1365-313X.2007.03369.x","article-title":"Interplay between MAMP-triggered and SA-mediated defense responses","volume":"53","author":"Tsuda","year":"2008","journal-title":"Plant J."},{"key":"10.1016\/j.chom.2025.04.019_bib50","doi-asserted-by":"crossref","first-page":"138","DOI":"10.1111\/tpj.14618","article-title":"The JA-pathway MYC transcription factors regulate photomorphogenic responses by targeting HY5 gene expression","volume":"102","author":"Ortigosa","year":"2020","journal-title":"Plant J."},{"key":"10.1016\/j.chom.2025.04.019_bib51","doi-asserted-by":"crossref","first-page":"616","DOI":"10.1038\/s41477-019-0441-9","article-title":"MED25 connects enhancer-promoter looping and MYC2-dependent activation of jasmonate signalling","volume":"5","author":"Wang","year":"2019","journal-title":"Nat. Plants"},{"key":"10.1016\/j.chom.2025.04.019_bib52","doi-asserted-by":"crossref","first-page":"290","DOI":"10.1038\/s41477-020-0605-7","article-title":"Integrated multi-omics framework of the plant response to jasmonic acid","volume":"6","author":"Zander","year":"2020","journal-title":"Nat. Plants"},{"key":"10.1016\/j.chom.2025.04.019_bib53","doi-asserted-by":"crossref","first-page":"E1192","DOI":"10.1073\/pnas.1201616109","article-title":"Plant hormone jasmonate prioritizes defense over growth by interfering with gibberellin signaling cascade","volume":"109","author":"Yang","year":"2012","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.chom.2025.04.019_bib54","doi-asserted-by":"crossref","first-page":"379","DOI":"10.1016\/j.chom.2018.08.007","article-title":"The MAP4 Kinase SIK1 Ensures Robust Extracellular ROS Burst and Antibacterial Immunity in Plants","volume":"24","author":"Zhang","year":"2018","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.chom.2025.04.019_bib55","doi-asserted-by":"crossref","first-page":"497","DOI":"10.1038\/nature05999","article-title":"A flagellin-induced complex of the receptor FLS2 and BAK1 initiates plant defence","volume":"448","author":"Chinchilla","year":"2007","journal-title":"Nature"},{"key":"10.1016\/j.chom.2025.04.019_bib56","doi-asserted-by":"crossref","first-page":"145","DOI":"10.1007\/s11427-013-4590-1","article-title":"Amino acid substitutions of GLY98, LEU245 and GLU543 in COI1 distinctively affect jasmonate-regulated male fertility in Arabidopsis","volume":"57","author":"Huang","year":"2014","journal-title":"Sci. China Life Sci."},{"key":"10.1016\/j.chom.2025.04.019_bib57","doi-asserted-by":"crossref","DOI":"10.1038\/ncomms12570","article-title":"Rewiring of jasmonate and phytochrome B signalling uncouples plant growth-defense tradeoffs","volume":"7","author":"Campos","year":"2016","journal-title":"Nat. Commun."},{"key":"10.1016\/j.chom.2025.04.019_bib58","doi-asserted-by":"crossref","first-page":"2635","DOI":"10.1105\/tpc.112.098749","article-title":"Arabidopsis MYC2 Interacts with DELLA Proteins in Regulating Sesquiterpene Synthase Gene Expression","volume":"24","author":"Hong","year":"2012","journal-title":"Plant Cell"},{"key":"10.1016\/j.chom.2025.04.019_bib59","doi-asserted-by":"crossref","first-page":"701","DOI":"10.1105\/tpc.110.080788","article-title":"The Arabidopsis bHLH Transcription Factors MYC3 and MYC4 Are Targets of JAZ Repressors and Act Additively with MYC2 in the Activation of Jasmonate Responses","volume":"23","author":"Fern\u00e1ndez-Calvo","year":"2011","journal-title":"Plant Cell"},{"key":"10.1016\/j.chom.2025.04.019_bib60","doi-asserted-by":"crossref","first-page":"57","DOI":"10.1016\/S0092-8674(00)81858-9","article-title":"The Arabidopsis NPR1 gene that controls systemic acquired resistance encodes a novel protein containing ankyrin repeats","volume":"88","author":"Cao","year":"1997","journal-title":"Cell"},{"key":"10.1016\/j.chom.2025.04.019_bib61","doi-asserted-by":"crossref","DOI":"10.1016\/j.celrep.2021.109054","article-title":"Two bHLH transcription factors, bHLH48 and bHLH60, associate with phytochrome interacting factor 7 to regulate hypocotyl elongation in Arabidopsis","volume":"35","author":"Yang","year":"2021","journal-title":"Cell Rep."},{"key":"10.1016\/j.chom.2025.04.019_bib62","doi-asserted-by":"crossref","first-page":"33679","DOI":"10.1073\/pnas.2001976117","article-title":"AtINO80 represses photomorphogenesis by modulating nucleosome density and H2A.Z incorporation in light-related genes","volume":"117","author":"Yang","year":"2020","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.chom.2025.04.019_bib63","doi-asserted-by":"crossref","first-page":"676","DOI":"10.1038\/nmeth.2019","article-title":"Fiji: an open-source platform for biological-image analysis","volume":"9","author":"Schindelin","year":"2012","journal-title":"Nat. Methods"},{"key":"10.1016\/j.chom.2025.04.019_bib64","doi-asserted-by":"crossref","first-page":"550","DOI":"10.1186\/s13059-014-0550-8","article-title":"Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2","volume":"15","author":"Love","year":"2014","journal-title":"Genome Biol."},{"key":"10.1016\/j.chom.2025.04.019_bib65","doi-asserted-by":"crossref","first-page":"589","DOI":"10.1007\/s11103-020-00965-5","article-title":"The basic helix-loop-helix transcription factor OsBLR1 regulates leaf angle in rice via brassinosteroid signalling","volume":"102","author":"Wang","year":"2020","journal-title":"Plant Mol. Biol."}],"container-title":["Cell Host & Microbe"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1931312825001520?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1931312825001520?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T17:58:00Z","timestamp":1762019880000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1931312825001520"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,6]]},"references-count":65,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2025,6]]}},"alternative-id":["S1931312825001520"],"URL":"https:\/\/doi.org\/10.1016\/j.chom.2025.04.019","relation":{},"ISSN":["1931-3128"],"issn-type":[{"value":"1931-3128","type":"print"}],"subject":[],"published":{"date-parts":[[2025,6]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Rhizosphere microbes mitigate the shade avoidance responses in Arabidopsis","name":"articletitle","label":"Article Title"},{"value":"Cell Host & Microbe","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.chom.2025.04.019","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"https:\/\/doi.org\/10.1016\/j.chom.2025.05.008","name":"associatedlink","label":"CrossRef DOI link to the associated document"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 Elsevier Inc. All rights are reserved, including those for text and data mining, AI training, and similar technologies.","name":"copyright","label":"Copyright"}]}}