{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,21]],"date-time":"2026-09-21T22:14:14Z","timestamp":1790028854107,"version":"4.0.1"},"reference-count":36,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"funder":[{"DOI":"10.13039\/501100018540","name":"Science Fund for Distinguished Young Scholars of Guangdong Province","doi-asserted-by":"publisher","award":["2019B151502050"],"award-info":[{"award-number":["2019B151502050"]}],"id":[{"id":"10.13039\/501100018540","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["32201218"],"award-info":[{"award-number":["32201218"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["22104047"],"award-info":[{"award-number":["22104047"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["92253304"],"award-info":[{"award-number":["92253304"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["22125403"],"award-info":[{"award-number":["22125403"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100010877","name":"Science, Technology and Innovation Commission of Shenzhen Municipality","doi-asserted-by":"publisher","award":["JSGGZD20220822095200001"],"award-info":[{"award-number":["JSGGZD20220822095200001"]}],"id":[{"id":"10.13039\/501100010877","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100010877","name":"Science, Technology and Innovation Commission of Shenzhen Municipality","doi-asserted-by":"publisher","award":["JCYJ20210324120210029"],"award-info":[{"award-number":["JCYJ20210324120210029"]}],"id":[{"id":"10.13039\/501100010877","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100010877","name":"Science, Technology and Innovation Commission of Shenzhen Municipality","doi-asserted-by":"publisher","award":["JCYJ20200109141212325"],"award-info":[{"award-number":["JCYJ20200109141212325"]}],"id":[{"id":"10.13039\/501100010877","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100010877","name":"Science, Technology and Innovation Commission of Shenzhen Municipality","doi-asserted-by":"publisher","award":["JCYJ20200109140814408"],"award-info":[{"award-number":["JCYJ20200109140814408"]}],"id":[{"id":"10.13039\/501100010877","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Journal of Chromatography A"],"published-print":{"date-parts":[[2025,6]]},"DOI":"10.1016\/j.chroma.2025.465914","type":"journal-article","created":{"date-parts":[[2025,3,29]],"date-time":"2025-03-29T12:49:52Z","timestamp":1743252592000},"page":"465914","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":1,"special_numbering":"C","title":["Ion exchange- and enrichment-based technology applied to large-scale plasma proteomic analysis of breast cancer neoadjuvant chemotherapy"],"prefix":"10.1016","volume":"1750","author":[{"given":"Xiaozhen","family":"Cui","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zhihua","family":"Zhong","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sen","family":"Xu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yini","family":"Pan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xi","family":"Wang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Luobin","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"An","family":"He","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xueting","family":"Ye","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hua","family":"Cao","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Weibing","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ruijun","family":"Tian","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.chroma.2025.465914_bib0001","doi-asserted-by":"crossref","first-page":"942","DOI":"10.15252\/msb.20156297","article-title":"Revisiting biomarker discovery by plasma proteomics","volume":"13","author":"Geyer","year":"2017","journal-title":"Mol. Syst. Biol."},{"key":"10.1016\/j.chroma.2025.465914_bib0002","doi-asserted-by":"crossref","first-page":"845","DOI":"10.1074\/mcp.R200007-MCP200","article-title":"The Human plasma proteome: history, character, and diagnostic prospects*","volume":"1","author":"Anderson","year":"2002","journal-title":"Mol. Cell. Proteomics"},{"key":"10.1016\/j.chroma.2025.465914_bib0003","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1038\/nature19949","article-title":"Mass-spectrometric exploration of proteome structure and function","volume":"537","author":"Aebersold","year":"2016","journal-title":"Nature"},{"key":"10.1016\/j.chroma.2025.465914_bib0004","doi-asserted-by":"crossref","first-page":"971","DOI":"10.1038\/nbt1235","article-title":"Protein biomarker discovery and validation: the long and uncertain path to clinical utility","volume":"24","author":"Rifai","year":"2006","journal-title":"Nat. Biotechnol."},{"key":"10.1016\/j.chroma.2025.465914_bib0005","doi-asserted-by":"crossref","first-page":"5241","DOI":"10.1021\/acs.jproteome.1c00657","article-title":"Advances and utility of the Human plasma proteome","volume":"20","author":"Deutsch","year":"2021","journal-title":"J. Proteome Res."},{"key":"10.1016\/j.chroma.2025.465914_bib0006","doi-asserted-by":"crossref","first-page":"6267","DOI":"10.3390\/cancers13246267","article-title":"Plasma proteome signature to predict the outcome of breast cancer patients receiving neoadjuvant chemotherapy","volume":"13","author":"Gwark","year":"2021","journal-title":"Cancers (Basel)"},{"key":"10.1016\/j.chroma.2025.465914_bib0007","doi-asserted-by":"crossref","first-page":"2050","DOI":"10.1073\/pnas.0608582104","article-title":"Understanding the nanoparticle-protein corona using methods to quantify exchange rates and affinities of proteins for nanoparticles","volume":"104","author":"Cedervall","year":"2007","journal-title":"PNAS"},{"key":"10.1016\/j.chroma.2025.465914_bib0008","doi-asserted-by":"crossref","first-page":"8827","DOI":"10.1021\/jacs.0c01853","article-title":"An analysis of the binding function and structural organization of the protein corona","volume":"142","author":"Zhang","year":"2020","journal-title":"JACS"},{"key":"10.1016\/j.chroma.2025.465914_bib0009","doi-asserted-by":"crossref","first-page":"3662","DOI":"10.1038\/s41467-020-17033-7","article-title":"Rapid, deep and precise profiling of the plasma proteome with multi-nanoparticle protein corona","volume":"11","author":"Blume","year":"2020","journal-title":"Nat. Commun."},{"key":"10.1016\/j.chroma.2025.465914_bib0010","doi-asserted-by":"crossref","DOI":"10.1073\/pnas.2106053119","article-title":"Engineered nanoparticles enable deep proteomics studies at scale by leveraging tunable nano\u2013bio interactions","volume":"119","author":"Ferdosi","year":"2022","journal-title":"PNAS"},{"key":"10.1016\/j.chroma.2025.465914_bib0011","doi-asserted-by":"crossref","first-page":"5389","DOI":"10.1038\/s41467-022-33044-y","article-title":"In situ analysis of nanoparticle soft corona and dynamic evolution","volume":"13","author":"Baimanov","year":"2022","journal-title":"Nat. Commun."},{"key":"10.1016\/j.chroma.2025.465914_bib0012","doi-asserted-by":"crossref","first-page":"14956","DOI":"10.1021\/acs.analchem.2c02736","article-title":"Synthesis of surface-functionalized molybdenum disulfide nanomaterials for efficient adsorption and deep profiling of the Human plasma proteome by data-independent acquisition","volume":"94","author":"Liu","year":"2022","journal-title":"Anal. Chem."},{"key":"10.1016\/j.chroma.2025.465914_bib0013","doi-asserted-by":"crossref","first-page":"e2797","DOI":"10.1002\/btpr.2797","article-title":"Amberlite IRA 900 versus calcium alginate in immobilization of a novel, engineered \u03b2-fructofuranosidase for short-chain fructooligosaccharide synthesis from sucrose","volume":"35","author":"Bedzo","year":"2019","journal-title":"Biotechnol. Progr."},{"key":"10.1016\/j.chroma.2025.465914_bib0014","doi-asserted-by":"crossref","first-page":"5084","DOI":"10.1016\/j.chroma.2010.05.065","article-title":"Dextran-grafted cation exchanger based on superporous agarose gel: adsorption isotherms, uptake kinetics and dynamic protein adsorption performance","volume":"1217","author":"Shi","year":"2010","journal-title":"J. Chromatogr. A"},{"key":"10.1016\/j.chroma.2025.465914_bib0015","doi-asserted-by":"crossref","first-page":"238","DOI":"10.1016\/j.chroma.2014.06.024","article-title":"Unfolding of a model protein on ion exchange and mixed mode chromatography surfaces","volume":"1355","author":"Gospodarek","year":"2014","journal-title":"J. Chromatogr. A"},{"key":"10.1016\/j.chroma.2025.465914_bib0016","doi-asserted-by":"crossref","first-page":"56","DOI":"10.1016\/j.chroma.2016.10.054","article-title":"Coupling of metal-organic frameworks-containing monolithic capillary-based selective enrichment with matrix-assisted laser desorption ionization-time-of-flight mass spectrometry for efficient analysis of protein phosphorylation","volume":"1498","author":"Li","year":"2017","journal-title":"J. Chromatogr. A"},{"key":"10.1016\/j.chroma.2025.465914_bib0017","first-page":"1148","volume":"283","author":"Chui","year":"1999"},{"key":"10.1016\/j.chroma.2025.465914_bib0018","doi-asserted-by":"crossref","first-page":"13850","DOI":"10.1021\/ja8057953","article-title":"A new zirconium inorganic building brick forming metal organic frameworks with exceptional stability","volume":"130","author":"Cavka","year":"2008","journal-title":"JACS"},{"key":"10.1016\/j.chroma.2025.465914_bib0019","first-page":"1278","volume":"78","author":"Montes","year":"2010"},{"key":"10.1016\/j.chroma.2025.465914_bib0020","first-page":"423","article-title":"Concentration and desalting of peptide and protein samples with a newly developed C18 membrane in a microspin column format","volume":"16","author":"Naldrett","year":"2005","journal-title":"J. Biomol. Tech."},{"key":"10.1016\/j.chroma.2025.465914_bib0021","doi-asserted-by":"crossref","first-page":"185","DOI":"10.1016\/j.cels.2016.02.015","article-title":"Plasma proteome profiling to assess Human health and disease","volume":"2","author":"Geyer Philipp","year":"2016","journal-title":"Cell Syst"},{"key":"10.1016\/j.chroma.2025.465914_bib0022","doi-asserted-by":"crossref","first-page":"2301","DOI":"10.1038\/nprot.2016.136","article-title":"The MaxQuant computational platform for mass spectrometry-based shotgun proteomics","volume":"11","author":"Tyanova","year":"2016","journal-title":"Nat. Protoc."},{"key":"10.1016\/j.chroma.2025.465914_bib0023","doi-asserted-by":"crossref","first-page":"923","DOI":"10.1038\/nmeth1113","article-title":"Semi-supervised learning for peptide identification from shotgun proteomics datasets","volume":"4","author":"K\u00e4ll","year":"2007","journal-title":"Nat. Methods"},{"key":"10.1016\/j.chroma.2025.465914_bib0024","doi-asserted-by":"crossref","first-page":"41","DOI":"10.1038\/s41592-019-0638-x","article-title":"DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput","volume":"17","author":"Demichev","year":"2020","journal-title":"Nat. Methods"},{"key":"10.1016\/j.chroma.2025.465914_bib0025","doi-asserted-by":"crossref","first-page":"6094","DOI":"10.1039\/C5CS00217F","article-title":"The nanoparticle biomolecule corona: lessons learned - challenge accepted?","volume":"44","author":"Docter","year":"2015","journal-title":"Chem. Soc. Rev."},{"key":"10.1016\/j.chroma.2025.465914_bib0026","doi-asserted-by":"crossref","DOI":"10.1038\/cddis.2017.179","article-title":"BASP1 interacts with oestrogen receptor \u03b1 and modifies the tamoxifen response","volume":"8","author":"Marsh","year":"2017","journal-title":"Cell Death Dis"},{"key":"10.1016\/j.chroma.2025.465914_bib0027","doi-asserted-by":"crossref","first-page":"389","DOI":"10.1007\/s10549-007-9619-3","article-title":"Neutrophil gelatinase-associated lipocalin (NGAL) is a predictor of poor prognosis in human primary breast cancer","volume":"108","author":"Bauer","year":"2008","journal-title":"Breast Cancer Res. Tr."},{"key":"10.1016\/j.chroma.2025.465914_bib0028","doi-asserted-by":"crossref","first-page":"5604","DOI":"10.1073\/pnas.0812101106","article-title":"Inhibition of Myc-induced cell transformation by brain acid-soluble protein 1 (BASP1)","volume":"106","author":"Hartl","year":"2009","journal-title":"PNAS"},{"key":"10.1016\/j.chroma.2025.465914_bib0029","article-title":"C-reactive protein and risk of breast cancer: a systematic review and meta-analysis","volume":"5","author":"Guo","year":"2015","journal-title":"Sci. Rep."},{"key":"10.1016\/j.chroma.2025.465914_bib0030","doi-asserted-by":"crossref","first-page":"282","DOI":"10.1016\/j.ebiom.2019.04.008","article-title":"Quantitative proteomics identifies brain acid soluble protein 1 (BASP1) as a prognostic biomarker candidate in pancreatic cancer tissue","volume":"43","author":"Zhou","year":"2019","journal-title":"EBioMedicine"},{"key":"10.1016\/j.chroma.2025.465914_bib0031","doi-asserted-by":"crossref","first-page":"97","DOI":"10.1186\/s12935-017-0452-4","article-title":"High brain acid soluble protein 1(BASP1) is a poor prognostic factor for cervical cancer and promotes tumor growth","volume":"17","author":"Tang","year":"2017","journal-title":"Cancer Cell Int"},{"key":"10.1016\/j.chroma.2025.465914_bib0032","doi-asserted-by":"crossref","first-page":"1982","DOI":"10.1007\/s11605-011-1678-4","article-title":"Expression and clinical significance of l-plastin in colorectal carcinoma","volume":"15","author":"Li","year":"2011","journal-title":"J. Gastrointest. Surg."},{"key":"10.1016\/j.chroma.2025.465914_bib0033","doi-asserted-by":"crossref","first-page":"2098","DOI":"10.1002\/ijc.21593","article-title":"The leukocyte protein l-plastin induces proliferation, invasion and loss of E-cadherin expression in colon cancer cells","volume":"118","author":"Foran","year":"2006","journal-title":"Int. J. Cancer"},{"key":"10.1016\/j.chroma.2025.465914_bib0034","doi-asserted-by":"crossref","first-page":"1073","DOI":"10.1242\/jcs.093799","article-title":"Actin-bundling proteins in cancer progression at a glance","volume":"125","author":"Stevenson","year":"2012","journal-title":"J. Cell Sci."},{"key":"10.1016\/j.chroma.2025.465914_bib0035","doi-asserted-by":"crossref","first-page":"185","DOI":"10.1016\/j.cels.2016.02.015","article-title":"Plasma proteome profiling to assess Human health and disease","volume":"2","author":"Geyer","year":"2016","journal-title":"Cell Syst"},{"key":"10.1016\/j.chroma.2025.465914_bib0036","doi-asserted-by":"crossref","first-page":"76","DOI":"10.1016\/j.chroma.2018.06.020","article-title":"Mixed-mode ion exchange-based integrated proteomics technology for fast and deep plasma proteome profiling","volume":"1564","author":"Xue","year":"2018","journal-title":"J. Chromatogr. A"}],"container-title":["Journal of Chromatography A"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0021967325002626?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0021967325002626?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,11,3]],"date-time":"2025-11-03T18:03:46Z","timestamp":1762193026000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0021967325002626"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,6]]},"references-count":36,"alternative-id":["S0021967325002626"],"URL":"https:\/\/doi.org\/10.1016\/j.chroma.2025.465914","relation":{},"ISSN":["0021-9673"],"issn-type":[{"value":"0021-9673","type":"print"}],"subject":[],"published":{"date-parts":[[2025,6]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Ion exchange- and enrichment-based technology applied to large-scale plasma proteomic analysis of breast cancer neoadjuvant chemotherapy","name":"articletitle","label":"Article Title"},{"value":"Journal of Chromatography A","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.chroma.2025.465914","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 Elsevier B.V. All rights are reserved, including those for text and data mining, AI training, and similar technologies.","name":"copyright","label":"Copyright"}],"article-number":"465914"}}