{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,26]],"date-time":"2026-09-26T02:22:33Z","timestamp":1790389353828,"version":"4.1.0"},"reference-count":36,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2020,6,1]],"date-time":"2020-06-01T00:00:00Z","timestamp":1590969600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2020,6,1]],"date-time":"2020-06-01T00:00:00Z","timestamp":1590969600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"}],"content-domain":{"domain":["clinicalkey.com","clinicalkey.com.au","clinicalkey.es","clinicalkey.fr","clinicalkey.jp","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Comparative Immunology, Microbiology and Infectious Diseases"],"published-print":{"date-parts":[[2020,6]]},"DOI":"10.1016\/j.cimid.2020.101471","type":"journal-article","created":{"date-parts":[[2020,3,19]],"date-time":"2020-03-19T14:00:52Z","timestamp":1584626452000},"page":"101471","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":14,"special_numbering":"C","title":["Detection of a novel clone of Acinetobacter baumannii isolated from a dog with otitis externa"],"prefix":"10.1016","volume":"70","author":[{"given":"Francesca Paola","family":"Nocera","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Luciana","family":"Addante","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Loredana","family":"Capozzi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Angelica","family":"Bianco","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Filomena","family":"Fiorito","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Luisa","family":"De Martino","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Antonio","family":"Parisi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.cimid.2020.101471_bib0005","doi-asserted-by":"crossref","first-page":"341","DOI":"10.1111\/j.1365-3164.2007.00619.x","article-title":"Aetiology of canine otitis externa: a retrospective study of 100 cases","volume":"18","author":"Saridomichelakis","year":"2007","journal-title":"Vet. Dermatol."},{"key":"10.1016\/j.cimid.2020.101471_bib0010","doi-asserted-by":"crossref","first-page":"254","DOI":"10.1111\/j.1748-5827.2011.01058.x","article-title":"The association between the signalment, common causes of canine otitis externa and pathogens","volume":"52","author":"Zur","year":"2011","journal-title":"J. Small Anim. Pract."},{"key":"10.1016\/j.cimid.2020.101471_bib0015","doi-asserted-by":"crossref","first-page":"7","DOI":"10.1136\/inp.i470","article-title":"Discovering the causes of otitis externa","volume":"38","author":"Paterson","year":"2016","journal-title":"In Pract."},{"key":"10.1016\/j.cimid.2020.101471_bib0020","doi-asserted-by":"crossref","first-page":"384","DOI":"10.1016\/j.apjtb.2015.11.012","article-title":"An update on microbiological causes of canine otitis externa in Campania Region, Italy","volume":"6","author":"De Martino","year":"2016","journal-title":"Asian Pac. J. Trop. Biomed."},{"key":"10.1016\/j.cimid.2020.101471_bib0025","doi-asserted-by":"crossref","first-page":"538","DOI":"10.1128\/CMR.00058-07","article-title":"Acinetobacter baumannii: emergence of a successful pathogen","volume":"21","author":"Peleg","year":"2008","journal-title":"Clin. Microbiol. Rev."},{"key":"10.1016\/j.cimid.2020.101471_bib0030","doi-asserted-by":"crossref","first-page":"233","DOI":"10.1093\/jac\/dkp428","article-title":"Global spread of carbapenem-resistant Acinetobacter baumannii","volume":"65","author":"Higgins","year":"2010","journal-title":"J. Antimicrob. Chemother."},{"key":"10.1016\/j.cimid.2020.101471_bib0035","doi-asserted-by":"crossref","first-page":"1807","DOI":"10.1093\/jac\/dkq191","article-title":"Carbapenem-resistant Acinetobacter baumannii and Klebsiella pneumoniae across a hospital system: impact of post-acute care facilities on dissemination","volume":"65","author":"Perez","year":"2010","journal-title":"J. Antimicrob. Chemother."},{"key":"10.1016\/j.cimid.2020.101471_bib0040","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1155\/2016\/2475067","article-title":"Mechanisms of antimicrobial resistance in ESKAPE pathogens","volume":"2016","author":"Santajit","year":"2016","journal-title":"Biomed Res. Int."},{"key":"10.1016\/j.cimid.2020.101471_bib0045","first-page":"435","article-title":"Multidrug resistant Acinetobacter baumannii in veterinary medicine--emergence of an underestimated pathogen?","volume":"127","author":"M\u00fcller","year":"2014","journal-title":"Berl. Munch. Tierarztl. Wochenschr."},{"key":"10.1016\/j.cimid.2020.101471_bib0050","doi-asserted-by":"crossref","first-page":"462","DOI":"10.1111\/1348-0421.12601","article-title":"Species distribution, virulence factors and antimicrobial resistance of Acinetobacter spp. isolates from dogs and cats: a preliminary study: Acinetobacter spp. from dogs and cats","volume":"62","author":"Kimura","year":"2018","journal-title":"Microbiol. Immunol."},{"key":"10.1016\/j.cimid.2020.101471_bib0055","doi-asserted-by":"crossref","first-page":"2872","DOI":"10.3389\/fmicb.2018.02872","article-title":"Hospitalized pets as a source of carbapenem-resistance","volume":"9","author":"Gentilini","year":"2018","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.cimid.2020.101471_bib0060","doi-asserted-by":"crossref","DOI":"10.1111\/vde.12528","article-title":"Isolation and identification of Acinetobacter spp. from healthy canine skin","volume":"29","author":"Mitchell","year":"2018","journal-title":"Vet. Dermatol."},{"key":"10.1016\/j.cimid.2020.101471_bib0065","doi-asserted-by":"crossref","first-page":"59","DOI":"10.1016\/j.jgar.2018.08.011","article-title":"Acinetobacter in veterinary medicine, with an emphasis on Acinetobacter baumannii","volume":"16","author":"van der Kolk","year":"2019","journal-title":"J. Glob. Antimicrob. Resist."},{"key":"10.1016\/j.cimid.2020.101471_bib0070","volume":"7.1","author":"EUCAST","year":"2017"},{"key":"10.1016\/j.cimid.2020.101471_bib0075","series-title":"Performance Standards for Antimicrobial Susceptibility Testing: Twenty-fifth Informational Supplement","author":"CLSI, M100-S25","year":"2015"},{"key":"10.1016\/j.cimid.2020.101471_bib0080","volume":"6","author":"EUCAST","year":"2016"},{"key":"10.1016\/j.cimid.2020.101471_bib0085","doi-asserted-by":"crossref","first-page":"2114","DOI":"10.1093\/bioinformatics\/btu170","article-title":"Trimmomatic: a flexible trimmer for Illumina sequence data","volume":"30","author":"Bolger","year":"2014","journal-title":"Bioinformatics"},{"key":"10.1016\/j.cimid.2020.101471_bib0090","doi-asserted-by":"crossref","first-page":"455","DOI":"10.1089\/cmb.2012.0021","article-title":"SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing","volume":"19","author":"Bankevich","year":"2012","journal-title":"J. Comput. Biol."},{"key":"10.1016\/j.cimid.2020.101471_bib0095","doi-asserted-by":"crossref","first-page":"19126","DOI":"10.1073\/pnas.0906412106","article-title":"Shifting the genomic gold standard for the prokaryotic species definition","volume":"106","author":"Richter","year":"2009","journal-title":"PNAS"},{"key":"10.1016\/j.cimid.2020.101471_bib0100","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0010034","article-title":"The population structure of Acinetobacter baumannii: expanding multiresistant clones from an ancestral susceptible genetic pool","volume":"5","author":"Diancourt","year":"2010","journal-title":"PLoS One"},{"key":"10.1016\/j.cimid.2020.101471_bib0105","doi-asserted-by":"crossref","first-page":"4382","DOI":"10.1128\/JCM.43.9.4382-4390.2005","article-title":"Development of a multilocus sequence typing scheme for characterization of clinical isolates of Acinetobacter baumannii","volume":"43","author":"Bartual","year":"2005","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.cimid.2020.101471_bib0110","doi-asserted-by":"crossref","first-page":"D682","DOI":"10.1093\/nar\/gkv1004","article-title":"BacWGSTdb, a database for genotyping and source tracking bacterial pathogens","volume":"44","author":"Ruan","year":"2016","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.cimid.2020.101471_bib0115","doi-asserted-by":"crossref","first-page":"212","DOI":"10.1128\/AAC.01310-13","article-title":"ARG-ANNOT, a new bioinformatic tool to discover antibiotic resistance genes in bacterial genomes","volume":"58","author":"Gupta","year":"2014","journal-title":"Antimicrob. Agents Chemother."},{"key":"10.1016\/j.cimid.2020.101471_bib0120","doi-asserted-by":"crossref","first-page":"3348","DOI":"10.1128\/AAC.00419-13","article-title":"The comprehensive antibiotic resistance database","volume":"57","author":"McArthur","year":"2013","journal-title":"Antimicrob. Agents Chemother."},{"key":"10.1016\/j.cimid.2020.101471_bib0125","doi-asserted-by":"crossref","DOI":"10.4161\/bact.27943","article-title":"Applying the ResFinder and VirulenceFinder web-services for easy identification of acquired antibiotic resistance and E. coli virulence genes in bacteriophage and prophage nucleotide sequences","volume":"4","author":"Kleinheinz","year":"2014","journal-title":"Bacteriophage"},{"key":"10.1016\/j.cimid.2020.101471_bib0130","doi-asserted-by":"crossref","DOI":"10.3389\/fcimb.2017.00055","article-title":"Biology of Acinetobacter baumannii: pathogenesis, antibiotic resistance mechanisms, and prospective treatment options","volume":"7","author":"Lee","year":"2017","journal-title":"Front. Cell. Infect. Microbiol."},{"key":"10.1016\/j.cimid.2020.101471_bib0135","doi-asserted-by":"crossref","first-page":"1977","DOI":"10.3389\/fmicb.2017.01977","article-title":"Acinetobacter baumannii virulence traits: a comparative study of a novel sequence type with other italian endemic international clones","volume":"8","author":"Ambrosi","year":"2017","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.cimid.2020.101471_bib0140","doi-asserted-by":"crossref","DOI":"10.1016\/j.ajic.2019.04.009","article-title":"Acinetobacter baumannii can be transferred from contaminated nitrile examination gloves to polypropylene plastic surfaces","author":"Takoi","year":"2019","journal-title":"Am. J. Infect. Control"},{"key":"10.1016\/j.cimid.2020.101471_bib0145","series-title":"Acinetobacter Baumannii","first-page":"259","article-title":"Isolation and characterization of the acinetobactin and baumannoferrin siderophores produced by Acinetobacter baumannii","author":"Penwell","year":"2019"},{"key":"10.1016\/j.cimid.2020.101471_bib0150","doi-asserted-by":"crossref","first-page":"2","DOI":"10.5808\/GI.2015.13.1.2","article-title":"Genes involved in the biosynthesis and transport of acinetobactin in Acinetobacter baumannii","volume":"13","author":"Hasan","year":"2015","journal-title":"Genomics Inform."},{"key":"10.1016\/j.cimid.2020.101471_bib0155","doi-asserted-by":"crossref","DOI":"10.1016\/j.nmni.2019.100549","article-title":"adeABC efflux gene in Acinetobacter baumannii","volume":"30","author":"Xu","year":"2019","journal-title":"New Microbes New Infect."},{"key":"10.1016\/j.cimid.2020.101471_bib0160","doi-asserted-by":"crossref","first-page":"4817","DOI":"10.1128\/AAC.00877-15","article-title":"Biofilm formation caused by clinical acinetobacter baumannii isolates is associated with overexpression of the AdeFGH Efflux pump","volume":"59","author":"He","year":"2015","journal-title":"Antimicrob. Agents Chemother."},{"key":"10.1016\/j.cimid.2020.101471_bib0165","doi-asserted-by":"crossref","first-page":"1139","DOI":"10.1586\/14787210.2015.1066247","article-title":"Detection of expanded-spectrum \u03b2-lactamases in gram-negative bacteria in the 21st century","volume":"13","author":"Al-Bayssari","year":"2015","journal-title":"Expert Rev. Anti. Ther."},{"key":"10.1016\/j.cimid.2020.101471_bib0170","doi-asserted-by":"crossref","first-page":"241","DOI":"10.1128\/CMR.00117-13","article-title":"O.X.A. -lactamases","volume":"27","author":"Evans","year":"2014","journal-title":"Clin. Microbiol. Rev."},{"key":"10.1016\/j.cimid.2020.101471_bib0175","doi-asserted-by":"crossref","first-page":"617","DOI":"10.1111\/jsap.12555","article-title":"Multi-drug-resistant Acinetobacter calcoaceticus-Acinetobacter baumannii complex infection outbreak in dogs and cats in a veterinary hospital: nosocomial Acinetobacter infection outbreak","volume":"57","author":"Kuzi","year":"2016","journal-title":"J. Small Anim. Pract."},{"key":"10.1016\/j.cimid.2020.101471_bib0180","doi-asserted-by":"crossref","first-page":"2359","DOI":"10.1128\/AEM.03824-14","article-title":"Extrahuman epidemiology of Acinetobacter baumannii in Lebanon","volume":"81","author":"Rafei","year":"2015","journal-title":"Appl. Environ. Microbiol."}],"container-title":["Comparative Immunology, Microbiology and Infectious Diseases"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0147957120300606?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0147957120300606?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,9,27]],"date-time":"2025-09-27T06:45:25Z","timestamp":1758955525000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0147957120300606"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,6]]},"references-count":36,"alternative-id":["S0147957120300606"],"URL":"https:\/\/doi.org\/10.1016\/j.cimid.2020.101471","relation":{},"ISSN":["0147-9571"],"issn-type":[{"value":"0147-9571","type":"print"}],"subject":[],"published":{"date-parts":[[2020,6]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Detection of a novel clone of Acinetobacter baumannii isolated from a dog with otitis externa","name":"articletitle","label":"Article Title"},{"value":"Comparative Immunology, Microbiology and Infectious Diseases","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.cimid.2020.101471","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2020 Elsevier Ltd. All rights reserved.","name":"copyright","label":"Copyright"}],"article-number":"101471"}}