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Exp. Bot."},{"key":"10.1016\/j.cub.2026.07.044_bib53","doi-asserted-by":"crossref","first-page":"2125","DOI":"10.1002\/j.1460-2075.1996.tb00566.x","article-title":"Tom7 modulates the dynamics of the mitochondrial outer membrane translocase and plays a pathway-related role in protein import","volume":"15","author":"H\u00f6nlinger","year":"1996","journal-title":"EMBO J."},{"key":"10.1016\/j.cub.2026.07.044_bib54","doi-asserted-by":"crossref","first-page":"113","DOI":"10.1016\/j.jmb.2010.11.002","article-title":"Biogenesis of mitochondria: dual role of Tom7 in modulating assembly of the preprotein translocase of the outer membrane","volume":"405","author":"Becker","year":"2011","journal-title":"J. Mol. 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Biol. Chem."},{"key":"10.1016\/j.cub.2026.07.044_bib59","doi-asserted-by":"crossref","first-page":"89","DOI":"10.1266\/ggs.76.89","article-title":"The gene for alternative oxidase-2 (AOX2) from Arabidopsis thaliana consists of five exons unlike other AOX genes and is transcribed at an early stage during germination","volume":"76","author":"Saish","year":"2001","journal-title":"Genes Genet. Syst."},{"key":"10.1016\/j.cub.2026.07.044_bib60","doi-asserted-by":"crossref","first-page":"3073","DOI":"10.1016\/j.febslet.2008.07.061","article-title":"Type II NAD(P)H dehydrogenases are targeted to mitochondria and chloroplasts or peroxisomes in Arabidopsis thaliana","volume":"582","author":"Carrie","year":"2008","journal-title":"FEBS Lett."},{"key":"10.1016\/j.cub.2026.07.044_bib61","doi-asserted-by":"crossref","first-page":"14","DOI":"10.1093\/pcp\/pci218","article-title":"A nuclear gene for the iron-sulfur subunit of mitochondrial complex II is specifically expressed during Arabidopsis seed development and germination","volume":"47","author":"Elorza","year":"2006","journal-title":"Plant Cell Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib62","doi-asserted-by":"crossref","first-page":"277","DOI":"10.3389\/fpls.2017.00277","article-title":"An active Mitochondrial Complex II Present in Mature Seeds Contains an Embryo-Specific Iron-Sulfur Subunit Regulated by ABA and bZIP53 and Is Involved in Germination and Seedling Establishment","volume":"8","author":"Restovic","year":"2017","journal-title":"Front. 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Plant Biol."},{"key":"10.1016\/j.cub.2026.07.044_bib66","doi-asserted-by":"crossref","first-page":"1326","DOI":"10.1104\/pp.19.01255","article-title":"Identification of Low-Abundance Lipid Droplet Proteins in Seeds and Seedlings","volume":"182","author":"Kretzschmar","year":"2020","journal-title":"Plant Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib67","doi-asserted-by":"crossref","first-page":"380","DOI":"10.1042\/BST0330380","article-title":"Storage reserve mobilization in germinating oilseeds: Arabidopsis as a model system","volume":"33","author":"Penfield","year":"2005","journal-title":"Biochem. Soc. Trans."},{"key":"10.1016\/j.cub.2026.07.044_bib68","doi-asserted-by":"crossref","first-page":"2520","DOI":"10.3390\/ijms19092520","article-title":"The gamma-Aminobutyric Acid (GABA) Alleviates Salt Stress Damage during Seeds Germination of White Clover Associated with Na+\/K+ Transportation, Dehydrins Accumulation, and Stress-Related Genes Expression in White Clover","volume":"19","author":"Cheng","year":"2018","journal-title":"Int. J. Mol. Sci."},{"key":"10.1016\/j.cub.2026.07.044_bib69","first-page":"82","article-title":"Exogenous gamma-Aminobutyric Acid Can Improve Seed Germination and Seedling Growth of Two Cotton Cultivars under Salt Stress","volume":"13","author":"Dong","year":"2023","journal-title":"Plants (Basel)"},{"key":"10.1016\/j.cub.2026.07.044_bib70","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0003383","article-title":"Mutants of GABA transaminase (POP2) suppress the severe phenotype of succinic semialdehyde dehydrogenase (ssadh) mutants in Arabidopsis","volume":"3","author":"Ludewig","year":"2008","journal-title":"PLoS One"},{"key":"10.1016\/j.cub.2026.07.044_bib71","doi-asserted-by":"crossref","first-page":"52","DOI":"10.1104\/pp.114.236539","article-title":"Plants utilize a highly conserved system for repair of NADH and NADPH hydrates","volume":"165","author":"Niehaus","year":"2014","journal-title":"Plant Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib72","doi-asserted-by":"crossref","first-page":"18834","DOI":"10.1073\/pnas.0606221103","article-title":"Genetic basis for natural variation in seed vitamin E levels in Arabidopsis thaliana","volume":"103","author":"Gilliland","year":"2006","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.cub.2026.07.044_bib73","doi-asserted-by":"crossref","first-page":"604","DOI":"10.1093\/pcp\/pcn032","article-title":"Genetic evidence for the role of isopentenyl diphosphate isomerases in the mevalonate pathway and plant development in Arabidopsis","volume":"49","author":"Okada","year":"2008","journal-title":"Plant Cell Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib74","doi-asserted-by":"crossref","first-page":"1180","DOI":"10.1093\/plphys\/kiad655","article-title":"Deep proteomics reveals incorporation of unedited proteins into mitochondrial protein complexes in Arabidopsis","volume":"195","author":"Rugen","year":"2024","journal-title":"Plant Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib75","doi-asserted-by":"crossref","first-page":"776","DOI":"10.1016\/j.cub.2024.12.037","article-title":"The atypical proteome of mitochondria from mature pollen grains","volume":"35","author":"Boussardon","year":"2025","journal-title":"Curr. Biol."},{"key":"10.1016\/j.cub.2026.07.044_bib76","doi-asserted-by":"crossref","first-page":"63","DOI":"10.1104\/pp.19.00955","article-title":"Nucleotide Metabolism in Plants","volume":"182","author":"Witte","year":"2020","journal-title":"Plant Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib77","doi-asserted-by":"crossref","first-page":"743","DOI":"10.1111\/j.1365-313X.2005.02411.x","article-title":"EMBRYONIC FACTOR 1 encodes an AMP deaminase and is essential for the zygote to embryo transition in Arabidopsis","volume":"42","author":"Xu","year":"2005","journal-title":"Plant J."},{"key":"10.1016\/j.cub.2026.07.044_bib78","doi-asserted-by":"crossref","first-page":"2831","DOI":"10.1105\/tpc.17.00433","article-title":"Dihydrofolate Reductase\/Thymidylate Synthase Fine-Tunes the Folate Status and Controls Redox Homeostasis in Plants","volume":"29","author":"Gorelova","year":"2017","journal-title":"Plant Cell"},{"key":"10.1016\/j.cub.2026.07.044_bib79","doi-asserted-by":"crossref","first-page":"1342","DOI":"10.1104\/pp.111.183129","article-title":"In-depth temporal transcriptome profiling reveals a crucial developmental switch with roles for RNA processing and organelle metabolism that are essential for germination in Arabidopsis","volume":"157","author":"Narsai","year":"2011","journal-title":"Plant Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib80","doi-asserted-by":"crossref","first-page":"3501","DOI":"10.1093\/jxb\/erx182","article-title":"Water content, adenylate kinase, and mitochondria drive adenylate balance in dehydrating and imbibing seeds","volume":"68","author":"Raveneau","year":"2017","journal-title":"J. Exp. Bot."},{"key":"10.1016\/j.cub.2026.07.044_bib81","doi-asserted-by":"crossref","first-page":"503","DOI":"10.1007\/s00438-013-0768-2","article-title":"Group 1 LEA proteins, an ancestral plant protein group, are also present in other eukaryotes, and in the archeae and bacteria domains","volume":"288","author":"Campos","year":"2013","journal-title":"Mol. Genet. Genomics"},{"key":"10.1016\/j.cub.2026.07.044_bib82","doi-asserted-by":"crossref","first-page":"3407","DOI":"10.1016\/j.csbj.2021.05.051","article-title":"Pleiotropic roles of late embryogenesis abundant proteins of Deinococcus radiodurans against oxidation and desiccation","volume":"19","author":"Liu","year":"2021","journal-title":"Comput. Struct. Biotechnol. J."},{"key":"10.1016\/j.cub.2026.07.044_bib83","doi-asserted-by":"crossref","first-page":"24","DOI":"10.1111\/nph.16536","article-title":"Plant small heat shock proteins - evolutionary and functional diversity","volume":"227","author":"Waters","year":"2020","journal-title":"New Phytol."},{"key":"10.1016\/j.cub.2026.07.044_bib84","doi-asserted-by":"crossref","first-page":"13504","DOI":"10.1073\/pnas.192468399","article-title":"Small heat-shock proteins regulate membrane lipid polymorphism","volume":"99","author":"Tsvetkova","year":"2002","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.cub.2026.07.044_bib85","doi-asserted-by":"crossref","first-page":"3148","DOI":"10.1105\/tpc.114.127316","article-title":"The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress","volume":"26","author":"Candat","year":"2014","journal-title":"Plant Cell"},{"key":"10.1016\/j.cub.2026.07.044_bib86","doi-asserted-by":"crossref","first-page":"685","DOI":"10.1111\/j.1365-313X.2009.03907.x","article-title":"The lack of mitochondrial AtFtsH4 protease alters Arabidopsis leaf morphology at the late stage of rosette development under short-day photoperiod","volume":"59","author":"Gibala","year":"2009","journal-title":"Plant J."},{"key":"10.1016\/j.cub.2026.07.044_bib87","doi-asserted-by":"crossref","first-page":"588","DOI":"10.1111\/j.1469-8137.2008.02701.x","article-title":"Role of Lon1 protease in post-germinative growth and maintenance of mitochondrial function in Arabidopsis thaliana","volume":"181","author":"Rigas","year":"2009","journal-title":"New Phytol."},{"key":"10.1016\/j.cub.2026.07.044_bib88","doi-asserted-by":"crossref","DOI":"10.1038\/srep28315","article-title":"The mitochondrial protease AtFTSH4 safeguards Arabidopsis shoot apical meristem function","volume":"6","author":"Dolzblasz","year":"2016","journal-title":"Sci. Rep."},{"key":"10.1016\/j.cub.2026.07.044_bib89","doi-asserted-by":"crossref","first-page":"1006","DOI":"10.1093\/pcp\/pcy041","article-title":"m-AAA Complexes Are Not Crucial for the Survival of Arabidopsis Under Optimal Growth Conditions Despite Their Importance for Mitochondrial Translation","volume":"59","author":"Kolodziejczak","year":"2018","journal-title":"Plant Cell Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib90","doi-asserted-by":"crossref","first-page":"769","DOI":"10.1093\/plphys\/kiab296","article-title":"FTSH4 and OMA1 mitochondrial proteases reduce moderate heat stress-induced protein aggregation","volume":"187","author":"Maziak","year":"2021","journal-title":"Plant Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib91","doi-asserted-by":"crossref","first-page":"1543","DOI":"10.3389\/fpls.2017.01543","article-title":"AtOMA1 Affects the OXPHOS System and Plant Growth in Contrast to Other Newly Identified ATP-Independent Proteases in Arabidopsis Mitochondria","volume":"8","author":"Migdal","year":"2017","journal-title":"Front. Plant Sci."},{"key":"10.1016\/j.cub.2026.07.044_bib92","doi-asserted-by":"crossref","first-page":"14458","DOI":"10.1074\/jbc.M114.548156","article-title":"Arabidopsis AtPARK13, which confers thermotolerance, targets misfolded proteins","volume":"289","author":"Basak","year":"2014","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.cub.2026.07.044_bib93","doi-asserted-by":"crossref","first-page":"148","DOI":"10.1104\/pp.20.00136","article-title":"Mitochondrial CLPP2 Assists Coordination and Homeostasis of Respiratory Complexes","volume":"184","author":"Petereit","year":"2020","journal-title":"Plant Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib94","doi-asserted-by":"crossref","first-page":"12168","DOI":"10.1074\/jbc.M413189200","article-title":"The mitochondrial type II peroxiredoxin F is essential for redox homeostasis and root growth of Arabidopsis thaliana under stress","volume":"280","author":"Finkemeier","year":"2005","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.cub.2026.07.044_bib95","doi-asserted-by":"crossref","first-page":"1281","DOI":"10.1111\/pce.12919","article-title":"Glutathione peroxidase-like enzymes cover five distinct cell compartments and membrane surfaces in Arabidopsis thaliana","volume":"40","author":"Attacha","year":"2017","journal-title":"Plant Cell Environ."},{"key":"10.1016\/j.cub.2026.07.044_bib96","doi-asserted-by":"crossref","first-page":"101","DOI":"10.1104\/pp.107.113613","article-title":"Decrease in manganese superoxide dismutase leads to reduced root growth and affects tricarboxylic acid cycle flux and mitochondrial redox homeostasis","volume":"147","author":"Morgan","year":"2008","journal-title":"Plant Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib97","doi-asserted-by":"crossref","first-page":"1072","DOI":"10.1126\/science.aab3472","article-title":"Monodehydroascorbate reductase mediates TNT toxicity in plants","volume":"349","author":"Johnston","year":"2015","journal-title":"Science"},{"key":"10.1016\/j.cub.2026.07.044_bib98","doi-asserted-by":"crossref","first-page":"4281","DOI":"10.1093\/jxb\/err138","article-title":"Plants contain two SCO proteins that are differentially involved in cytochrome c oxidase function and copper and redox homeostasis","volume":"62","author":"Attallah","year":"2011","journal-title":"J. Exp. Bot."},{"key":"10.1016\/j.cub.2026.07.044_bib99","doi-asserted-by":"crossref","first-page":"1099","DOI":"10.1104\/pp.112.195974","article-title":"Copper chaperone antioxidant protein1 is essential for copper homeostasis","volume":"159","author":"Shin","year":"2012","journal-title":"Plant Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib100","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pgen.1006703","article-title":"Triplin, a small molecule, reveals copper ion transport in ethylene signaling from ATX1 to RAN1","volume":"13","author":"Li","year":"2017","journal-title":"PLoS Genet."},{"key":"10.1016\/j.cub.2026.07.044_bib101","doi-asserted-by":"crossref","first-page":"1618","DOI":"10.3389\/fpls.2018.01618","article-title":"Dissecting the Physiological Function of Plant Glyoxalase I and Glyoxalase I-Like Proteins","volume":"9","author":"Schmitz","year":"2018","journal-title":"Front. 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Bot."},{"key":"10.1016\/j.cub.2026.07.044_bib104","doi-asserted-by":"crossref","first-page":"1464","DOI":"10.1126\/science.1153600","article-title":"Germination, genetics, and growth of an ancient date seed","volume":"320","author":"Sallon","year":"2008","journal-title":"Science"},{"key":"10.1016\/j.cub.2026.07.044_bib105","doi-asserted-by":"crossref","first-page":"252","DOI":"10.1016\/j.mito.2014.03.004","article-title":"The mitochondrial lysine acetylome of Arabidopsis","volume":"19","author":"K\u00f6nig","year":"2014","journal-title":"Mitochondrion"},{"key":"10.1016\/j.cub.2026.07.044_bib106","doi-asserted-by":"crossref","DOI":"10.1111\/tpj.70142","article-title":"Regulation of plant glycolysis and the tricarboxylic acid cycle by posttranslational modifications","volume":"122","author":"Zheng","year":"2025","journal-title":"Plant J."},{"key":"10.1016\/j.cub.2026.07.044_bib107","doi-asserted-by":"crossref","first-page":"72","DOI":"10.1016\/j.mito.2016.07.010","article-title":"Redox regulation of mitochondrial proteins and proteomes by cysteine thiol switches","volume":"33","author":"Nietzel","year":"2017","journal-title":"Mitochondrion"},{"key":"10.1016\/j.cub.2026.07.044_bib108","doi-asserted-by":"crossref","first-page":"185","DOI":"10.1002\/9781119312994.apr0549","article-title":"Mitochondrial Regulation and Signalling in the Photosynthetic Cell: Principles and Concepts","volume":"50","author":"Finkemeier","year":"2018","journal-title":"Annu. Plant Rev."},{"key":"10.1016\/j.cub.2026.07.044_bib109","doi-asserted-by":"crossref","first-page":"573","DOI":"10.1105\/tpc.19.00535","article-title":"Matrix Redox Physiology Governs the Regulation of Plant Mitochondrial Metabolism through Posttranslational Protein Modifications","volume":"32","author":"M\u00f8ller","year":"2020","journal-title":"Plant Cell"},{"key":"10.1016\/j.cub.2026.07.044_bib113","doi-asserted-by":"crossref","first-page":"808","DOI":"10.1104\/pp.114.243824","article-title":"FRIENDLY regulates mitochondrial distribution, fusion, and quality control in Arabidopsis","volume":"166","author":"El Zawily","year":"2014","journal-title":"Plant Physiol."},{"key":"10.1016\/j.cub.2026.07.044_bib111","doi-asserted-by":"crossref","first-page":"355","DOI":"10.1111\/j.1365-313X.2010.04322.x","article-title":"A ubiquitin-10 promoter-based vector set for fluorescent protein tagging facilitates temporal stability and native protein distribution in transient and stable expression studies","volume":"64","author":"Grefen","year":"2010","journal-title":"Plant J."},{"key":"10.1016\/j.cub.2026.07.044_bib117","doi-asserted-by":"crossref","first-page":"646","DOI":"10.1111\/tra.12506","article-title":"Golgi alpha1,4-fucosyltransferase of Arabidopsis thaliana partially localizes at the nuclear envelope","volume":"18","author":"Rips","year":"2017","journal-title":"Traffic"},{"key":"10.1016\/j.cub.2026.07.044_bib110","doi-asserted-by":"crossref","first-page":"644","DOI":"10.1016\/j.molp.2014.12.005","article-title":"The ABA-deficiency suppressor locus HAS2 encodes the PPR protein LOI1\/MEF11 involved in mitochondrial RNA editing","volume":"8","author":"Sechet","year":"2015","journal-title":"Mol. 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