{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,18]],"date-time":"2026-03-18T23:36:10Z","timestamp":1773876970792,"version":"3.50.1"},"reference-count":21,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2025,12,1]],"date-time":"2025-12-01T00:00:00Z","timestamp":1764547200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,12,1]],"date-time":"2025-12-01T00:00:00Z","timestamp":1764547200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,11,3]],"date-time":"2025-11-03T00:00:00Z","timestamp":1762128000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Data in Brief"],"published-print":{"date-parts":[[2025,12]]},"DOI":"10.1016\/j.dib.2025.112257","type":"journal-article","created":{"date-parts":[[2025,11,12]],"date-time":"2025-11-12T15:46:45Z","timestamp":1762962405000},"page":"112257","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"special_numbering":"C","title":["A dataset on the phylogeny of Mycobacterium avium subsp. paratuberculosis isolated from patients in a referral gastrointestinal diseases centre in the Sudan"],"prefix":"10.1016","volume":"63","author":[{"given":"Sanaa M.","family":"Idris","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wisal A.","family":"Elmagzoub","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Maha","family":"Isameldin","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nassir","family":"Arabi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Abdelmonem","family":"Abdo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mustafa","family":"Ibrahim","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0266-5180","authenticated-orcid":false,"given":"Sahar M.","family":"Bakhiet","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6361-7356","authenticated-orcid":false,"given":"Julius B.","family":"Okuni","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Lonzy","family":"Ojok","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ahmed A.","family":"Gameel","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Uwe","family":"Truyen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ahmad","family":"Amanzada","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ahmed","family":"Abd El Wahed","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3707-5087","authenticated-orcid":false,"given":"Kamal H.","family":"Eltom","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"ElSagad","family":"Eltayeb","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/j.dib.2025.112257_bib0001","series-title":"Paratuberculosis Organism, Disease, Control, CABI, Wallingford UK","first-page":"1","article-title":"Epidemiology, Global Prevalence and Economics of Infection","author":"Imada","year":"2020"},{"issue":"2","key":"10.1016\/j.dib.2025.112257_bib0002","doi-asserted-by":"crossref","first-page":"164","DOI":"10.1007\/s10393-022-01602-x","article-title":"Mycobacterium paratuberculosis zoonosis is a One Health emergency","volume":"19","author":"Dow","year":"2022","journal-title":"Ecohealth"},{"issue":"9","key":"10.1016\/j.dib.2025.112257_bib0003","doi-asserted-by":"crossref","DOI":"10.3390\/microorganisms12091890","article-title":"Mycobacterium paratuberculosis: A HERV Turn-On for Autoimmunity, Neurodegeneration, and Cancer?","volume":"12","author":"Dow","year":"2024","journal-title":"Microorganisms"},{"issue":"2","key":"10.1016\/j.dib.2025.112257_bib0004","doi-asserted-by":"crossref","first-page":"172","DOI":"10.4314\/ovj.v8i2.10","article-title":"Mycobacterium avium subspecies paratuberculosis: A possible causative agent in human morbidity and risk to public health safety","volume":"8","author":"Garvey","year":"2018","journal-title":"Open Vet J"},{"issue":"15","key":"10.1016\/j.dib.2025.112257_bib0005","doi-asserted-by":"crossref","first-page":"3135","DOI":"10.1017\/S095026881500076X","article-title":"The zoonotic potential of Mycobacterium avium ssp. paratuberculosis: a systematic review and meta-analyses of the evidence","volume":"143","author":"Waddell","year":"2015","journal-title":"Epidemiol Infect"},{"key":"10.1016\/j.dib.2025.112257_bib0006","doi-asserted-by":"crossref","first-page":"79","DOI":"10.1186\/s12864-015-2234-5","article-title":"Phylogenomic exploration of the relationships between strains of Mycobacterium avium subspecies paratuberculosis","volume":"17","author":"Bryant","year":"2016","journal-title":"BMC Genomics"},{"issue":"2","key":"10.1016\/j.dib.2025.112257_bib0007","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0031947","article-title":"Genome-wide analysis of the emerging infection with Mycobacterium avium subspecies paratuberculosis in the Arabian camels (Camelus dromedarius)","volume":"7","author":"Ghosh","year":"2012","journal-title":"PLoS One"},{"issue":"2","key":"10.1016\/j.dib.2025.112257_bib0008","first-page":"323","article-title":"Serological and Molecular Characterization of Mycobacterium avium Subsp. paratuberculosis (MAP) from Sheep, Goats, Cattle and Camels in the Eastern Province","volume":"11","author":"Elsohaby","year":"2021","journal-title":"Saudi Arabia, Animals (Basel)"},{"issue":"1","key":"10.1016\/j.dib.2025.112257_bib0009","doi-asserted-by":"crossref","first-page":"64","DOI":"10.1186\/s13567-015-0203-2","article-title":"Genetic diversity of Mycobacterium avium subspecies paratuberculosis and the influence of strain type on infection and pathogenesis: a review","volume":"46","author":"Stevenson","year":"2015","journal-title":"Vet Res"},{"issue":"3-4","key":"10.1016\/j.dib.2025.112257_bib0010","doi-asserted-by":"crossref","first-page":"479","DOI":"10.1016\/j.vetmic.2014.05.024","article-title":"SNP genotyping of animal and human derived isolates of Mycobacterium avium subsp. paratuberculosis","volume":"172","author":"Wynne","year":"2014","journal-title":"Vet Microbiol"},{"issue":"1","key":"10.1016\/j.dib.2025.112257_bib0011","first-page":"41","article-title":"Isolation of M. paratuberculosis from goats in Sudan","volume":"25","author":"Abbas","year":"1986","journal-title":"Sudan J Vet Sci Anim Husb"},{"key":"10.1016\/j.dib.2025.112257_bib0012","first-page":"94","article-title":"A survey of Johne\u2019s disease in Khartoum","volume":"18","author":"Abubaker","year":"1975","journal-title":"Vet Rec"},{"issue":"4","key":"10.1016\/j.dib.2025.112257_bib0013","first-page":"209","article-title":"Seroprevalence of Mycobacterium avium subsp. paratuberculosis in Dairy Cattle in Khartoum State, Sudan","volume":"7","author":"Elmagzoub","year":"2020","journal-title":"Vet Sci"},{"key":"10.1016\/j.dib.2025.112257_bib0014","first-page":"437","volume":"12","author":"Fawi","year":"1964","journal-title":"A note on Johne's disease among cattle in Sudan"},{"issue":"23","key":"10.1016\/j.dib.2025.112257_bib0015","doi-asserted-by":"crossref","first-page":"3312","DOI":"10.3390\/ani12233312","article-title":"First Report on Ovine Paratuberculosis in the Sudan: Diagnosis Using Different Techniques","volume":"12","author":"Idris","year":"2022","journal-title":"Animals (Basel)"},{"issue":"1","key":"10.1016\/j.dib.2025.112257_bib0016","doi-asserted-by":"crossref","first-page":"496","DOI":"10.1186\/s12917-025-04920-8","article-title":"Paratuberculosis in small ruminants in the Sudan: prevalence and risk factors","volume":"21","author":"Idris","year":"2025","journal-title":"BMC Vet Res"},{"issue":"4","key":"10.1016\/j.dib.2025.112257_bib0017","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0266533","article-title":"Mycobacterium avium subsp. paratuberculosis and microbiome profile of patients in a referral gastrointestinal diseases centre in the Sudan","volume":"17","author":"Elmagzoub","year":"2022","journal-title":"PLoS One"},{"issue":"3","key":"10.1016\/j.dib.2025.112257_bib0018","doi-asserted-by":"crossref","first-page":"614","DOI":"10.1128\/JCM.01986-08","article-title":"Factors affecting isolation and identification of Mycobacterium avium subsp. paratuberculosis from fecal and tissue samples in a liquid culture system","volume":"47","author":"Whittington","year":"2009","journal-title":"J Clin Microbiol"},{"issue":"6","key":"10.1016\/j.dib.2025.112257_bib0019","doi-asserted-by":"crossref","first-page":"587","DOI":"10.1177\/104063870601800611","article-title":"Comparison of three DNA preparation methods for real-time polymerase chain reaction confirmation of Mycobacterium avium subsp. paratuberculosis growth in an automated broth culture system","volume":"18","author":"Sweeney","year":"2006","journal-title":"J Vet Diagn Invest"},{"issue":"3","key":"10.1016\/j.dib.2025.112257_bib0020","doi-asserted-by":"crossref","first-page":"701","DOI":"10.1128\/JCM.36.3.701-707.1998","article-title":"Rapid detection of Mycobacterium paratuberculosis in clinical samples from ruminants and in spiked environmental samples by modified BACTEC 12B radiometric culture and direct confirmation by IS900 PCR","volume":"36","author":"Whittington","year":"1998","journal-title":"J Clin Microbiol"},{"key":"10.1016\/j.dib.2025.112257_bib0021","first-page":"95","article-title":"BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95\/98\/NT","volume":"41","author":"Hall","year":"1999","journal-title":"Nucleic Acids Symp Ser"}],"container-title":["Data in Brief"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2352340925009783?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2352340925009783?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,3,18]],"date-time":"2026-03-18T16:16:08Z","timestamp":1773850568000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S2352340925009783"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,12]]},"references-count":21,"alternative-id":["S2352340925009783"],"URL":"https:\/\/doi.org\/10.1016\/j.dib.2025.112257","relation":{"is-supplemented-by":[{"id-type":"uri","id":"https:\/\/data.mendeley.com\/datasets\/nwx7xgfnxp\/1","asserted-by":"subject"}]},"ISSN":["2352-3409"],"issn-type":[{"value":"2352-3409","type":"print"}],"subject":[],"published":{"date-parts":[[2025,12]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"A dataset on the phylogeny of Mycobacterium avium subsp. paratuberculosis isolated from patients in a referral gastrointestinal diseases centre in the Sudan","name":"articletitle","label":"Article Title"},{"value":"Data in Brief","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.dib.2025.112257","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 The Author(s). Published by Elsevier Inc.","name":"copyright","label":"Copyright"}],"article-number":"112257"}}