{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,11]],"date-time":"2026-07-11T07:14:56Z","timestamp":1783754096661,"version":"3.55.0"},"reference-count":31,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Environmental Pollution"],"published-print":{"date-parts":[[2026,9]]},"DOI":"10.1016\/j.envpol.2026.128591","type":"journal-article","created":{"date-parts":[[2026,6,15]],"date-time":"2026-06-15T23:31:18Z","timestamp":1781566278000},"page":"128591","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"special_numbering":"C","title":["Activity-guided discovery of antibiotic-transforming bacteria from environmental microbiomes using D-amino acid\u2013assisted fluorescence-activated cell sorting"],"prefix":"10.1016","volume":"405","author":[{"given":"Yi","family":"Liu","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kai-Li","family":"Wang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yu-Qi","family":"Hong","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0005-0070-9444","authenticated-orcid":false,"given":"Ye","family":"Yuan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hua","family":"Wang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yi-Qun","family":"Chen","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sheng-Song","family":"Yu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zi-Xuan","family":"Lu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yuan","family":"Pan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4155-462X","authenticated-orcid":false,"given":"Ting-Ting","family":"Zhu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.envpol.2026.128591_bib1","doi-asserted-by":"crossref","first-page":"663","DOI":"10.1038\/s41467-024-55668-y","article-title":"Metagenome-guided culturomics for the targeted enrichment of gut microbes","volume":"16","author":"Armetta","year":"2025","journal-title":"Nat. Commun."},{"key":"10.1016\/j.envpol.2026.128591_bib2","doi-asserted-by":"crossref","first-page":"76","DOI":"10.1186\/s40168-020-00836-7","article-title":"Cultivation-independent and cultivation-dependent metagenomes reveal genetic and enzymatic potential of microbial community involved in the degradation of a complex microbial polymer","volume":"8","author":"Costa","year":"2020","journal-title":"Microbiome"},{"key":"10.1016\/j.envpol.2026.128591_bib3","doi-asserted-by":"crossref","DOI":"10.1016\/j.jenvman.2025.124872","article-title":"Induced ciprofloxacin biotransformation and antibiotic-resistance genes control in sulfate-reducing microbial fuel cells: strategy and mechanism","volume":"379","author":"Diao","year":"2025","journal-title":"J. Environ. Manag."},{"key":"10.1016\/j.envpol.2026.128591_bib4","doi-asserted-by":"crossref","DOI":"10.1016\/j.envpol.2025.126296","article-title":"Investigating the impact of fecal contamination on antibiotic resistance genes in urban environments using host-associated molecular indicators","volume":"375","author":"Duan","year":"2025","journal-title":"Environ. Pollut."},{"key":"10.1016\/j.envpol.2026.128591_bib6","doi-asserted-by":"crossref","first-page":"84","DOI":"10.1186\/s40168-025-02075-0","article-title":"The mitigation of spatial constraint in porous environments enhances biofilm phylogenetic and functional diversity","volume":"13","author":"Fu","year":"2025","journal-title":"Microbiome"},{"key":"10.1016\/j.envpol.2026.128591_bib7","doi-asserted-by":"crossref","DOI":"10.1002\/anie.202505714","article-title":"Antibacterial siderophores of Pandoraea pathogens and their impact on the diseased lung microbiota","volume":"64","author":"Herzog","year":"2025","journal-title":"Angew. Chem.-Int. Edit."},{"key":"10.1016\/j.envpol.2026.128591_bib8","doi-asserted-by":"crossref","first-page":"4611","DOI":"10.3390\/molecules29194611","article-title":"Determination and ecological risk assessment of quinolone antibiotics in drinking and environmental waters using fully automated disk-based SPE coupled with UPLC\u2013MS\/MS","volume":"29","author":"Hu","year":"2024","journal-title":"Molecules"},{"key":"10.1016\/j.envpol.2026.128591_bib10","doi-asserted-by":"crossref","first-page":"1424","DOI":"10.1038\/s41587-023-01674-2","article-title":"High-throughput microbial culturomics using automation and machine learning","volume":"41","author":"Huang","year":"2023","journal-title":"Nat. Biotechnol."},{"key":"10.1016\/j.envpol.2026.128591_bib11","doi-asserted-by":"crossref","DOI":"10.71150\/jm.2411006","article-title":"Advances in functional analysis of the microbiome: integrating metabolic modeling, metabolite prediction, and pathway inference with Next-generation Sequencing data","volume":"63","author":"Jung","year":"2025","journal-title":"J. Microbiol."},{"key":"10.1016\/j.envpol.2026.128591_bib13","doi-asserted-by":"crossref","DOI":"10.1016\/j.cej.2025.167124","article-title":"Efficient degradation of cephalexin by newly isolated strain Brevundimonas sp. CEF1 and its biodegradation mechanisms","volume":"522","author":"Kou","year":"2025","journal-title":"Chem. Eng. J."},{"key":"10.1016\/j.envpol.2026.128591_bib14","doi-asserted-by":"crossref","first-page":"292","DOI":"10.3390\/toxics13040292","article-title":"Isolation and characterization of aerobic and facultative anaerobic 17\u03b2-Estradiol degrading bacteria in paddy soils and their potential mechanisms","volume":"13","author":"Li","year":"2025","journal-title":"Toxics"},{"key":"10.1016\/j.envpol.2026.128591_bib16","doi-asserted-by":"crossref","first-page":"17838","DOI":"10.1021\/acs.est.4c02906","article-title":"High-throughput single-cell metabolic labeling, sorting, and sequencing of active antibiotic-resistant bacteria in the environment","volume":"58","author":"Lin","year":"2024","journal-title":"Environ. Sci. Technol."},{"key":"10.1016\/j.envpol.2026.128591_bib17","doi-asserted-by":"crossref","DOI":"10.1111\/1462-2920.16592","article-title":"Bacterial rarity in a subarctic stream network: biodiversity patterns, assembly mechanisms and types of rarity","volume":"26","author":"Malazarte","year":"2024","journal-title":"Environ. Microbiol."},{"key":"10.1016\/j.envpol.2026.128591_bib18","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2025.123102","article-title":"Longitudinal metagenomic analysis on antibiotic resistome, mobilome, and microbiome of river ecosystems in a sub-tropical metropolitan city","volume":"274","author":"Mao","year":"2025","journal-title":"Water Res."},{"key":"10.1016\/j.envpol.2026.128591_bib19","doi-asserted-by":"crossref","DOI":"10.1016\/j.biortech.2023.130281","article-title":"Sorption of four antibiotics onto pristine biochar derived from macadamia nutshell","volume":"394","author":"Na","year":"2024","journal-title":"Bioresour. Technol."},{"key":"10.1016\/j.envpol.2026.128591_bib20","doi-asserted-by":"crossref","first-page":"e00109","DOI":"10.1128\/aem.00109-25","article-title":"Ultrahigh-throughput screening of environmental bacteria for proteolytic activity using droplet-based microfluidics","volume":"91","author":"Nakamura","year":"2025","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.envpol.2026.128591_bib21","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2023.120737","article-title":"Re-evaluation and modification of dehydrogenase activity tests in assessing microbial activity for wastewater treatment plant operation","volume":"246","author":"Pan","year":"2023","journal-title":"Water Res."},{"key":"10.1016\/j.envpol.2026.128591_bib22","doi-asserted-by":"crossref","DOI":"10.1016\/j.cej.2025.164063","article-title":"Synergistic photoelectrocatalytic removal of ciprofloxacin using WO3-gC3N4 coated grafoil electrode: insights into pH-driven kinetics and mechanism","volume":"516","author":"Rani","year":"2025","journal-title":"Chem. Eng. J."},{"key":"10.1016\/j.envpol.2026.128591_bib23","doi-asserted-by":"crossref","DOI":"10.1038\/s41467-025-67953-5","article-title":"Potentiators empower synthetic microbiomes as silent guardians against co-contamination","author":"Ruan","year":"2025","journal-title":"Nat. Commun."},{"key":"10.1016\/j.envpol.2026.128591_bib24","doi-asserted-by":"crossref","first-page":"e01303","DOI":"10.1128\/msystems.01303-23","article-title":"Unfolding and de-confounding: biologically meaningful causal inference from longitudinal multi-omic networks using METALICA","volume":"9","author":"Ruiz-Perez","year":"2024","journal-title":"mSystems"},{"key":"10.1016\/j.envpol.2026.128591_bib25","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2023.120858","article-title":"Composition of active bacterial communities and presence of opportunistic pathogens in disinfected and non-disinfected drinking water distribution systems in Finland","volume":"248","author":"Siponen","year":"2024","journal-title":"Water Res."},{"key":"10.1016\/j.envpol.2026.128591_bib26","doi-asserted-by":"crossref","DOI":"10.1016\/j.cej.2025.166350","article-title":"Microbial biodegradation of abacavir: isolation of Pseudomonas sp. A1 and elucidation of novel degradation pathways","volume":"521","author":"Sun","year":"2025","journal-title":"Chem. Eng. J."},{"key":"10.1016\/j.envpol.2026.128591_bib28","doi-asserted-by":"crossref","DOI":"10.1016\/j.envpol.2025.126806","article-title":"Novel bacteroides bacteriophage-like quantitative real-time PCR assays for human sewage pollution measurement","volume":"383","author":"Willis","year":"2025","journal-title":"Environ. Pollut."},{"key":"10.1016\/j.envpol.2026.128591_bib29","doi-asserted-by":"crossref","first-page":"7849","DOI":"10.1038\/s41467-023-43689-y","article-title":"Atomic-level polarization in electric fields of defects for electrocatalysis","volume":"14","author":"Xu","year":"2023","journal-title":"Nat. Commun."},{"key":"10.1016\/j.envpol.2026.128591_bib30","doi-asserted-by":"crossref","first-page":"121","DOI":"10.1186\/s40168-024-01830-z","article-title":"Metatranscriptomics-guided genome-scale metabolic reconstruction reveals the carbon flux and trophic interaction in methanogenic communities","volume":"12","author":"Yan","year":"2024","journal-title":"Microbiome"},{"key":"10.1016\/j.envpol.2026.128591_bib31","doi-asserted-by":"crossref","DOI":"10.1016\/j.jhazmat.2025.139604","article-title":"Antibiotic resistance genes in multi-matrices of Chaohu Lake: spatiotemporal variation and correlation with pesticides and PPCPs","volume":"497","author":"Yang","year":"2025","journal-title":"J. Hazard Mater."},{"key":"10.1016\/j.envpol.2026.128591_bib32","doi-asserted-by":"crossref","DOI":"10.1016\/j.cej.2023.144582","article-title":"Fast response humidity sensor based on hyperbranched zwitterionic polymer for respiratory monitoring and non-contact human machine interface","volume":"471","author":"Yang","year":"2023","journal-title":"Chem. Eng. J."},{"key":"10.1016\/j.envpol.2026.128591_bib33","doi-asserted-by":"crossref","first-page":"2418","DOI":"10.1021\/acschembio.2c00496","article-title":"Fluorescent D-amino acids for super-resolution microscopy of the bacterial cell wall","volume":"17","author":"Zhang","year":"2022","journal-title":"ACS Chem. Biol."},{"key":"10.1016\/j.envpol.2026.128591_bib34","doi-asserted-by":"crossref","first-page":"9051","DOI":"10.1038\/s41467-024-53446-4","article-title":"Sequencing-guided re-estimation and promotion of cultivability for environmental bacteria","volume":"15","author":"Zheng","year":"2024","journal-title":"Nat. Commun."},{"key":"10.1016\/j.envpol.2026.128591_bib35","doi-asserted-by":"crossref","DOI":"10.1002\/anie.202319400","article-title":"Development and applications of D-amino acid derivatives-based metabolic labeling of bacterial peptidoglycan","volume":"63","author":"Zheng","year":"2024","journal-title":"Angew. Chem.-Int. Edit."},{"key":"10.1016\/j.envpol.2026.128591_bib36","doi-asserted-by":"crossref","first-page":"172","DOI":"10.52601\/bpr.2024.240044","article-title":"An integrative approach for imaging and quantitative analysis of gut microbiota growth in vivo using fluorescent D-amino acid labeling and fluorescence in situ hybridization","volume":"11","author":"Zhou","year":"2025","journal-title":"Biophys. Rep"}],"container-title":["Environmental Pollution"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0269749126009619?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0269749126009619?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,7,11]],"date-time":"2026-07-11T06:45:31Z","timestamp":1783752331000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0269749126009619"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,9]]},"references-count":31,"alternative-id":["S0269749126009619"],"URL":"https:\/\/doi.org\/10.1016\/j.envpol.2026.128591","relation":{},"ISSN":["0269-7491"],"issn-type":[{"value":"0269-7491","type":"print"}],"subject":[],"published":{"date-parts":[[2026,9]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Activity-guided discovery of antibiotic-transforming bacteria from environmental microbiomes using D-amino acid\u2013assisted fluorescence-activated cell sorting","name":"articletitle","label":"Article Title"},{"value":"Environmental Pollution","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.envpol.2026.128591","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 Elsevier Ltd. All rights are reserved, including those for text and data mining, AI training, and similar technologies.","name":"copyright","label":"Copyright"}],"article-number":"128591"}}