{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,21]],"date-time":"2026-10-21T20:55:03Z","timestamp":1792616103859,"version":"4.5.0"},"reference-count":78,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T00:00:00Z","timestamp":1793491200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T00:00:00Z","timestamp":1793491200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T00:00:00Z","timestamp":1793491200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T00:00:00Z","timestamp":1793491200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T00:00:00Z","timestamp":1793491200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T00:00:00Z","timestamp":1793491200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T00:00:00Z","timestamp":1793491200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["52570129"],"award-info":[{"award-number":["52570129"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100019065","name":"Tianjin Municipal Science and Technology Program","doi-asserted-by":"publisher","award":["21JCJQJC00080"],"award-info":[{"award-number":["21JCJQJC00080"]}],"id":[{"id":"10.13039\/501100019065","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Environmental Research"],"published-print":{"date-parts":[[2026,11]]},"DOI":"10.1016\/j.envres.2026.125787","type":"journal-article","created":{"date-parts":[[2026,9,30]],"date-time":"2026-09-30T23:07:55Z","timestamp":1790809675000},"page":"125787","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"special_numbering":"P2","title":["Enhancement of activated sludge biofilm formation and microbial community modulation by exogenous amino acid supplementation under different environmental conditions"],"prefix":"10.1016","volume":"309","author":[{"given":"Muhammad","family":"Noman","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nabi","family":"Ullah","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kokab Saba","family":"Ali","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"family":"Bilal","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Faisal","family":"Khan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jiang","family":"Guanyu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0341-8464","authenticated-orcid":false,"given":"Wang","family":"Can","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.envres.2026.125787_bib1","doi-asserted-by":"crossref","first-page":"3388","DOI":"10.1021\/es0525511","article-title":"Continuous electricity generation at high voltages and currents using stacked microbial fuel cells","volume":"40","author":"Aelterman","year":"2006","journal-title":"Environ. Sci. Technol."},{"key":"10.1016\/j.envres.2026.125787_bib2","doi-asserted-by":"crossref","first-page":"410","DOI":"10.1016\/j.surfcoat.2015.07.062","article-title":"Influence of surface roughness on the initial formation of biofilm","volume":"284","author":"Ammar","year":"2015","journal-title":"Surf. Coating. Technol."},{"key":"10.1016\/j.envres.2026.125787_bib3","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1111\/omi.12315","article-title":"Polyamines in the virulence of bacterial pathogens of respiratory tract","volume":"36","author":"Banerji","year":"2021","journal-title":"Molecular oral microbiology"},{"key":"10.1016\/j.envres.2026.125787_bib4","doi-asserted-by":"crossref","first-page":"731","DOI":"10.1002\/bies.950190814","article-title":"Challenges: selective compartments for resistant microorganisms in antibiotic gradients","volume":"19","author":"Baquero","year":"1997","journal-title":"Bioessays"},{"key":"10.1016\/j.envres.2026.125787_bib5","doi-asserted-by":"crossref","DOI":"10.1128\/JB.00454-19","article-title":"Arginine biosynthesis modulates pyoverdine production and release in Pseudomonas putida as part of the mechanism of adaptation to oxidative stress","volume":"201","author":"Barrientos-Moreno","year":"2019","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.envres.2026.125787_bib6","doi-asserted-by":"crossref","DOI":"10.1038\/s41598-020-70675-x","article-title":"Arginine as an environmental and metabolic cue for cyclic diguanylate signalling and biofilm formation in Pseudomonas putida","volume":"10","author":"Barrientos-Moreno","year":"2020","journal-title":"Sci. Rep."},{"key":"10.1016\/j.envres.2026.125787_bib7","doi-asserted-by":"crossref","first-page":"7942","DOI":"10.1128\/AEM.05016-11","article-title":"Effect of elevated salt concentrations on the aerobic granular sludge process: linking microbial activity with microbial community structure","volume":"77","author":"Bassin","year":"2011","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib8","series-title":"Bacterial Biofilms","first-page":"249","article-title":"Escherichia coli biofilms","author":"Beloin","year":"2008"},{"key":"10.1016\/j.envres.2026.125787_bib9","doi-asserted-by":"crossref","first-page":"345","DOI":"10.1515\/bmc-2012-0001","article-title":"The role of hyperosmotic stress in inflammation and disease","volume":"3","author":"Brocker","year":"2012","journal-title":"Biomol. Concepts"},{"key":"10.1016\/j.envres.2026.125787_bib10","doi-asserted-by":"crossref","first-page":"1101","DOI":"10.1016\/j.scitotenv.2019.03.434","article-title":"Influence of physicochemical surface properties on the adhesion of bacteria onto four types of plastics","volume":"671","author":"Cai","year":"2019","journal-title":"Sci. Total Environ."},{"key":"10.1016\/j.envres.2026.125787_bib11","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/s13068-018-1278-6","article-title":"Effect of pH and temperature on microbial community structure and carboxylic acid yield during the acidogenic digestion of duckweed","volume":"11","author":"Calicioglu","year":"2018","journal-title":"Biotechnol. Biofuels"},{"key":"10.1016\/j.envres.2026.125787_bib12","first-page":"54","article-title":"Differential effects of sucrose or NaCl osmotic shock on \u03b2-galactosidase activity in Escherichia coli BW25993 is dependent on normalization method by total viable count or total protein content","volume":"18","author":"Chang","year":"2014","journal-title":"Journal of Experimental Microbiology and Immunology"},{"key":"10.1016\/j.envres.2026.125787_bib14","doi-asserted-by":"crossref","first-page":"274","DOI":"10.3934\/microbiol.2018.2.274","article-title":"Extracellular polymeric substances, a key element in understanding biofilm phenotype","volume":"4","author":"Di Martino","year":"2018","journal-title":"AIMS microbiology"},{"key":"10.1016\/j.envres.2026.125787_bib15","doi-asserted-by":"crossref","first-page":"400","DOI":"10.2166\/wpt.2018.050","article-title":"The effect of calcium on biofilm formation in dairy wastewater","volume":"13","author":"Dixon","year":"2018","journal-title":"Water Pract. Technol."},{"key":"10.1016\/j.envres.2026.125787_bib16","doi-asserted-by":"crossref","DOI":"10.1016\/j.envres.2026.125198","article-title":"Process-dependent niches of rpf-harboring microorganisms regulate nitrogen and carbon functional networks in full-scale activated sludge","author":"Dong","year":"2026","journal-title":"Environ. Res."},{"key":"10.1016\/j.envres.2026.125787_bib17","doi-asserted-by":"crossref","first-page":"623","DOI":"10.1038\/nrmicro2415","article-title":"The biofilm matrix","volume":"8","author":"Flemming","year":"2010","journal-title":"Nat. Rev. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib18","doi-asserted-by":"crossref","first-page":"563","DOI":"10.1038\/nrmicro.2016.94","article-title":"Biofilms: an emergent form of bacterial life","volume":"14","author":"Flemming","year":"2016","journal-title":"Nat. Rev. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib19","doi-asserted-by":"crossref","first-page":"1387","DOI":"10.1016\/j.watres.2007.10.007","article-title":"Sequential anode\u2013cathode configuration improves cathodic oxygen reduction and effluent quality of microbial fuel cells","volume":"42","author":"Freguia","year":"2008","journal-title":"Water Res."},{"key":"10.1016\/j.envres.2026.125787_bib21","doi-asserted-by":"crossref","DOI":"10.1016\/j.envres.2025.122610","article-title":"Enhanced pollutant removal in moving bed biofilm reactor under high-salinity condition via specialized quorum sensing bacteria","author":"Gao","year":"2025","journal-title":"Environ. Res."},{"key":"10.1016\/j.envres.2026.125787_bib22","doi-asserted-by":"crossref","first-page":"1049","DOI":"10.1016\/j.pnsc.2008.04.001","article-title":"Bacterial adhesion and biofilms on surfaces","volume":"18","author":"Garrett","year":"2008","journal-title":"Prog. Nat. Sci."},{"key":"10.1016\/j.envres.2026.125787_bib23","doi-asserted-by":"crossref","first-page":"195","DOI":"10.1080\/08927010009386310","article-title":"Influence of calcium and other cations on surface adhesion of bacteria and diatoms: a review","volume":"15","author":"Geesey","year":"2000","journal-title":"Biofouling"},{"key":"10.1016\/j.envres.2026.125787_bib24","doi-asserted-by":"crossref","first-page":"5238","DOI":"10.1128\/AEM.00637-11","article-title":"Role of exopolysaccharides in Pseudomonas aeruginosa biofilm formation and architecture","volume":"77","author":"Ghafoor","year":"2011","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib25","doi-asserted-by":"crossref","first-page":"310","DOI":"10.1016\/j.micinf.2016.01.002","article-title":"Candida albicans biofilms: development, regulation, and molecular mechanisms","volume":"18","author":"Gulati","year":"2016","journal-title":"Microb. Infect."},{"key":"10.1016\/j.envres.2026.125787_bib26","doi-asserted-by":"crossref","first-page":"29","DOI":"10.3390\/biom8020029","article-title":"Critical assessment of methods to quantify biofilm growth and evaluate antibiofilm activity of host defence peptides","volume":"8","author":"Haney","year":"2018","journal-title":"Biomolecules"},{"key":"10.1016\/j.envres.2026.125787_bib27","doi-asserted-by":"crossref","first-page":"424","DOI":"10.1016\/j.bej.2009.11.014","article-title":"Bacterial adhesion: from mechanism to control","volume":"48","author":"Hori","year":"2010","journal-title":"Biochem. Eng. J."},{"key":"10.1016\/j.envres.2026.125787_bib28","doi-asserted-by":"crossref","first-page":"281","DOI":"10.1111\/mmi.13023","article-title":"Critical roles of arginine in growth and biofilm development by S treptococcus gordonii","volume":"97","author":"Jakubovics","year":"2015","journal-title":"Mol. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib29","doi-asserted-by":"crossref","DOI":"10.1128\/aem.00569-24","article-title":"Exogenous putrescine plays a switch-like influence on the pH stress adaptability of biofilm-based activated sludge","volume":"90","author":"Jiang","year":"2024","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib30","doi-asserted-by":"crossref","DOI":"10.1016\/j.biotechadv.2021.107724","article-title":"Biofilm application in the microbial biochemicals production process","volume":"48","author":"Jiang","year":"2021","journal-title":"Biotechnol. Adv."},{"key":"10.1016\/j.envres.2026.125787_bib31","doi-asserted-by":"crossref","first-page":"2602","DOI":"10.1038\/s41598-019-39267-2","article-title":"Continuous shear stress alters metabolism, mass-transport, and growth in electroactive biofilms independent of surface substrate transport","volume":"9","author":"Jones","year":"2019","journal-title":"Sci. Rep."},{"key":"10.1016\/j.envres.2026.125787_bib32","doi-asserted-by":"crossref","first-page":"205","DOI":"10.1177\/0022034509359403","article-title":"Biofilm dispersal: mechanisms, clinical implications, and potential therapeutic uses","volume":"89","author":"Kaplan","year":"2010","journal-title":"J. Dent. Res."},{"key":"10.1016\/j.envres.2026.125787_bib33","article-title":"Effects of hydraulic conditions on biofilm detached in drinking water distribution system","volume":"53","author":"Khu","year":"2023","journal-title":"J. Water Proc. Eng."},{"key":"10.1016\/j.envres.2026.125787_bib34","doi-asserted-by":"crossref","first-page":"42","DOI":"10.1038\/s41522-020-00153-9","article-title":"Biofilm dynamics: linking in situ biofilm biomass and metabolic activity measurements in real-time under continuous flow conditions","volume":"6","author":"Klopper","year":"2020","journal-title":"npj Biofilms Microbiomes"},{"key":"10.1016\/j.envres.2026.125787_bib35","doi-asserted-by":"crossref","DOI":"10.1101\/cshperspect.a010306","article-title":"Bacterial biofilms: development, dispersal, and therapeutic strategies in the dawn of the postantibiotic era","volume":"3","author":"Kostakioti","year":"2013","journal-title":"Cold Spring Harb. Perspect. Med."},{"key":"10.1016\/j.envres.2026.125787_bib36","doi-asserted-by":"crossref","first-page":"185","DOI":"10.1016\/S0378-1097(03)00356-2","article-title":"Use of acetate for enrichment of electrochemically active microorganisms and their 16S rDNA analyses","volume":"223","author":"Lee","year":"2003","journal-title":"FEMS Microbiol. Lett."},{"key":"10.1016\/j.envres.2026.125787_bib37","doi-asserted-by":"crossref","DOI":"10.3389\/fcimb.2022.833269","article-title":"Cadaverine is a switch in the lysine degradation pathway in Pseudomonas aeruginosa biofilm identified by untargeted metabolomics","volume":"12","author":"Leggett","year":"2022","journal-title":"Front. Cell. Infect. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib38","doi-asserted-by":"crossref","first-page":"1006","DOI":"10.1016\/j.bios.2008.08.001","article-title":"Improvement of the anodic bioelectrocatalytic activity of mixed culture biofilms by a simple consecutive electrochemical selection procedure","volume":"24","author":"Liu","year":"2008","journal-title":"Biosens. Bioelectron."},{"key":"10.1016\/j.envres.2026.125787_bib39","doi-asserted-by":"crossref","first-page":"251","DOI":"10.1016\/j.jbiotec.2004.02.012","article-title":"The influence of cell and substratum surface hydrophobicities on microbial attachment","volume":"110","author":"Liu","year":"2004","journal-title":"J. Biotechnol."},{"key":"10.1016\/j.envres.2026.125787_bib40","doi-asserted-by":"crossref","first-page":"282","DOI":"10.1016\/j.ijfoodmicro.2007.09.006","article-title":"Effect of temperature and growth media on the attachment of Listeria monocytogenes to stainless steel","volume":"120","author":"Mai","year":"2007","journal-title":"Int. J. Food Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib41","doi-asserted-by":"crossref","first-page":"91","DOI":"10.1016\/j.jwpe.2018.03.010","article-title":"Illumination wavelengths effect on Arthrospira platensis production and its process applications in river Yamuna water treatment","volume":"23","author":"Mehan","year":"2018","journal-title":"J. Water Proc. Eng."},{"key":"10.1016\/j.envres.2026.125787_bib42","doi-asserted-by":"crossref","first-page":"87","DOI":"10.1016\/S0966-842X(01)02284-3","article-title":"The functions of Ca2+ in bacteria: a role for EF-hand proteins?","volume":"10","author":"Michiels","year":"2002","journal-title":"Trends Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib43","doi-asserted-by":"crossref","DOI":"10.1016\/j.jenvman.2024.123015","article-title":"Effect of light intensity on Chlorella sp. biofilm growth on anaerobically digested food effluents (ADFE)","volume":"371","author":"Mkpuma","year":"2024","journal-title":"J. Environ. Manag."},{"key":"10.1016\/j.envres.2026.125787_bib44","doi-asserted-by":"crossref","first-page":"228","DOI":"10.1016\/j.fbp.2015.05.011","article-title":"The impact of material properties, nutrient load and shear stress on biofouling in food industries","volume":"95","author":"Moreira","year":"2015","journal-title":"Food Bioprod. Process."},{"key":"10.1016\/j.envres.2026.125787_bib45","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0023307","article-title":"Magnesium limitation is an environmental trigger of the Pseudomonas aeruginosa biofilm lifestyle","volume":"6","author":"Mulcahy","year":"2011","journal-title":"PLoS One"},{"key":"10.1016\/j.envres.2026.125787_bib46","doi-asserted-by":"crossref","first-page":"383","DOI":"10.1016\/j.lwt.2013.09.022","article-title":"Biofilm formation of Salmonella Typhimurium on stainless steel and acrylic surfaces as affected by temperature and pH level","volume":"55","author":"Nguyen","year":"2014","journal-title":"LWT--Food Sci. Technol."},{"key":"10.1016\/j.envres.2026.125787_bib47","doi-asserted-by":"crossref","first-page":"907","DOI":"10.3389\/fmicb.2015.00907","article-title":"Magnesium ions mitigate biofilm formation of bacillus species via downregulation of matrix genes expression","volume":"6","author":"Oknin","year":"2015","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib48","doi-asserted-by":"crossref","DOI":"10.1016\/j.envres.2026.124364","article-title":"Metagenomic surveillance of temperature-drived bacterial threats to drinking water safety","author":"Ouyang","year":"2026","journal-title":"Environ. Res."},{"key":"10.1016\/j.envres.2026.125787_bib49","doi-asserted-by":"crossref","first-page":"1088","DOI":"10.1002\/prot.25587","article-title":"A novel bacterial l\u2010arginine sensor controlling c\u2010di\u2010GMP levels in Pseudomonas aeruginosa","volume":"86","author":"Paiardini","year":"2018","journal-title":"Proteins: Struct., Funct., Bioinf."},{"key":"10.1016\/j.envres.2026.125787_bib50","doi-asserted-by":"crossref","first-page":"5499","DOI":"10.1016\/j.watres.2012.07.029","article-title":"Effect of shear stress and growth conditions on detachment and physical properties of biofilms","volume":"46","author":"Paul","year":"2012","journal-title":"Water Res."},{"key":"10.1016\/j.envres.2026.125787_bib51","doi-asserted-by":"crossref","DOI":"10.1016\/j.envres.2023.117560","article-title":"Optimization of moving bed biofilm reactors for the treatment of municipal wastewater","volume":"241","author":"Pratap","year":"2024","journal-title":"Environ. Res."},{"key":"10.1016\/j.envres.2026.125787_bib52","doi-asserted-by":"crossref","first-page":"5373","DOI":"10.1128\/AEM.70.9.5373-5382.2004","article-title":"Biofuel cells select for microbial consortia that self-mediate electron transfer","volume":"70","author":"Rabaey","year":"2004","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib53","doi-asserted-by":"crossref","first-page":"3703","DOI":"10.1007\/s10811-020-02278-y","article-title":"Can luminescent solar concentrators increase microalgal growth on anaerobically digested food effluent?","volume":"32","author":"Raeisossadati","year":"2020","journal-title":"J. Appl. Phycol."},{"key":"10.1016\/j.envres.2026.125787_bib54","doi-asserted-by":"crossref","first-page":"21185","DOI":"10.1074\/jbc.M115.644401","article-title":"Arginine-ornithine antiporter ArcD controls arginine metabolism and interspecies biofilm development of Streptococcus gordonii","volume":"290","author":"Sakanaka","year":"2015","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.envres.2026.125787_bib55","doi-asserted-by":"crossref","DOI":"10.1128\/AEM.02885-19","article-title":"Nutrient level determines biofilm characteristics and subsequent impact on microbial corrosion and biocide effectiveness","volume":"86","author":"Salgar-Chaparro","year":"2020","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib56","doi-asserted-by":"crossref","first-page":"4386","DOI":"10.3390\/ijms23084386","article-title":"Nutrient sensing and biofilm modulation: the example of L-arginine in Pseudomonas","volume":"23","author":"Scribani Rossi","year":"2022","journal-title":"Int. J. Mol. Sci."},{"key":"10.1016\/j.envres.2026.125787_bib57","doi-asserted-by":"crossref","first-page":"229","DOI":"10.1016\/j.watres.2008.10.010","article-title":"Species association increases biofilm resistance to chemical and mechanical treatments","volume":"43","author":"Sim\u00f5es","year":"2009","journal-title":"Water Res."},{"key":"10.1016\/j.envres.2026.125787_bib58","doi-asserted-by":"crossref","first-page":"355","DOI":"10.1016\/j.micres.2006.01.004","article-title":"Influence of magnesium ions on biofilm formation by Pseudomonas fluorescens","volume":"161","author":"Song","year":"2006","journal-title":"Microbiol. Res."},{"key":"10.1016\/j.envres.2026.125787_bib59","doi-asserted-by":"crossref","first-page":"807","DOI":"10.1038\/s41396-020-00815-8","article-title":"Contribution of horizontal gene transfer to the functionality of microbial biofilm on a macroalgae","volume":"15","author":"Song","year":"2021","journal-title":"ISME J."},{"key":"10.1016\/j.envres.2026.125787_bib60","doi-asserted-by":"crossref","first-page":"485","DOI":"10.1016\/j.foodcont.2016.08.041","article-title":"Effect of temperature on pathogenic and non-pathogenic Vibrio parahaemolyticus biofilm formation","volume":"73","author":"Song","year":"2017","journal-title":"Food Control"},{"key":"10.1016\/j.envres.2026.125787_bib61","doi-asserted-by":"crossref","first-page":"1155","DOI":"10.1002\/jsfa.10124","article-title":"Temperature and pH growth profile prediction of newly isolated bacterial strains from alkaline soils","volume":"100","author":"\u0160ovljanski","year":"2020","journal-title":"J. Sci. Food Agric."},{"key":"10.1016\/j.envres.2026.125787_bib62","doi-asserted-by":"crossref","first-page":"339","DOI":"10.1016\/S0740-0020(02)00123-5","article-title":"Influence of the incubation temperature, atmosphere and dynamic conditions on biofilm formation by Salmonella spp","volume":"20","author":"Stepanovi\u0107","year":"2003","journal-title":"Food Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib63","doi-asserted-by":"crossref","first-page":"1485","DOI":"10.1128\/JB.185.5.1485-1491.2003","article-title":"Diffusion in biofilms","volume":"185","author":"Stewart","year":"2003","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.envres.2026.125787_bib64","doi-asserted-by":"crossref","first-page":"187","DOI":"10.1146\/annurev.micro.56.012302.160705","article-title":"Biofilms as complex differentiated communities","volume":"56","author":"Stoodley","year":"2002","journal-title":"Annu. Rev. Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib65","doi-asserted-by":"crossref","first-page":"1449","DOI":"10.1080\/09168451.2019.1576500","article-title":"Metabolic regulatory mechanisms and physiological roles of functional amino acids and their applications in yeast","volume":"83","author":"Takagi","year":"2019","journal-title":"Biosci. Biotechnol. Biochem."},{"key":"10.1016\/j.envres.2026.125787_bib66","doi-asserted-by":"crossref","DOI":"10.1016\/j.envres.2024.120688","article-title":"Deciphering the internal mechanism of nitrogen removal from sludge and biofilm under low temperature from the perspective of microbial function metabolism","volume":"267","author":"Tang","year":"2025","journal-title":"Environ. Res."},{"key":"10.1016\/j.envres.2026.125787_bib67","doi-asserted-by":"crossref","DOI":"10.1016\/j.dwt.2025.101509","article-title":"Putrescine-mediated biofilm development in activated sludge under low-temperatures: a novel regulatory mechanism","author":"Ullah","year":"2025","journal-title":"Desalination Water Treat."},{"key":"10.1016\/j.envres.2026.125787_bib68","doi-asserted-by":"crossref","DOI":"10.1002\/mbo3.893","article-title":"The influence of temperature and pH on bacterial community composition of microbial mats in hot springs from Costa Rica","volume":"8","author":"Uribe\u2010Lor\u00edo","year":"2019","journal-title":"Microbiologyopen"},{"key":"10.1016\/j.envres.2026.125787_bib69","doi-asserted-by":"crossref","first-page":"720","DOI":"10.1016\/j.fm.2009.07.006","article-title":"The arginine deiminase pathway of Lactobacillus fermentum IMDO 130101 responds to growth under stress conditions of both temperature and salt","volume":"26","author":"Vrancken","year":"2009","journal-title":"Food Microbiol."},{"key":"10.1016\/j.envres.2026.125787_bib70","doi-asserted-by":"crossref","first-page":"3305","DOI":"10.1007\/s11999-014-3538-5","article-title":"Biofilm growth has a threshold response to glucose in vitro","volume":"472","author":"Waldrop","year":"2014","journal-title":"Clin. Orthop. Relat. Res."},{"key":"10.1016\/j.envres.2026.125787_bib71","doi-asserted-by":"crossref","first-page":"150","DOI":"10.1186\/s40168-022-01345-5","article-title":"Microbial community regulation and performance enhancement in gas biofilters by interrupting bacterial communication","volume":"10","author":"Wang","year":"2022","journal-title":"Microbiome"},{"key":"10.1016\/j.envres.2026.125787_bib72","doi-asserted-by":"crossref","DOI":"10.1016\/j.biortech.2023.130137","article-title":"Microbial metabolic flexibility guarantees function resilience in response to starvation disturbance","volume":"393","author":"Wang","year":"2024","journal-title":"Bioresour. Technol."},{"key":"10.1016\/j.envres.2026.125787_bib73","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2023.119917","article-title":"Microbial community evolution and functional trade-offs of biofilm in odor treatment biofilters","volume":"235","author":"Wang","year":"2023","journal-title":"Water Res."},{"key":"10.1016\/j.envres.2026.125787_bib74","doi-asserted-by":"crossref","DOI":"10.1016\/j.chemosphere.2021.132465","article-title":"Reduction of biofilm adhesion strength by adjusting the characteristics of biofilms through enzymatic quorum quenching","volume":"288","author":"Wang","year":"2022","journal-title":"Chemosphere"},{"key":"10.1016\/j.envres.2026.125787_bib75","doi-asserted-by":"crossref","first-page":"313","DOI":"10.1038\/nature24624","article-title":"Progress in and promise of bacterial quorum sensing research","volume":"551","author":"Whiteley","year":"2017","journal-title":"Nature"},{"key":"10.1016\/j.envres.2026.125787_bib76","doi-asserted-by":"crossref","DOI":"10.1116\/1.5054057","article-title":"Influence of surface topography on bacterial adhesion: a review","volume":"13","author":"Wu","year":"2018","journal-title":"Biointerphases"},{"key":"10.1016\/j.envres.2026.125787_bib77","doi-asserted-by":"crossref","DOI":"10.1016\/j.scitotenv.2020.139449","article-title":"Effects of N-acyl-homoserine lactones-based quorum sensing on biofilm formation, sludge characteristics, and bacterial community during the start-up of bioaugmented reactors","volume":"735","author":"Xiong","year":"2020","journal-title":"Sci. Total Environ."},{"key":"10.1016\/j.envres.2026.125787_bib78","doi-asserted-by":"crossref","first-page":"535","DOI":"10.1016\/j.watres.2019.03.093","article-title":"Bacterial assembly in the bio-cake of membrane bioreactors: stochastic vs. deterministic processes","volume":"157","author":"Xu","year":"2019","journal-title":"Water Res."},{"key":"10.1016\/j.envres.2026.125787_bib79","doi-asserted-by":"crossref","DOI":"10.1016\/j.scitotenv.2020.139196","article-title":"Impacts of carrier properties, environmental conditions and extracellular polymeric substances on biofilm formation of sieved fine particles from activated sludge","volume":"731","author":"Xu","year":"2020","journal-title":"Sci. Total Environ."},{"key":"10.1016\/j.envres.2026.125787_bib80","article-title":"Engineering an Escherichia coli with performance-enhanced switch utilizing CRISPR-Cas9 system as living quorum quencher for biofilm formation inhibition","author":"Zhou","year":"2025","journal-title":"Environ. Res."}],"container-title":["Environmental Research"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0013935126021183?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0013935126021183?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,10,21]],"date-time":"2026-10-21T20:25:52Z","timestamp":1792614352000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0013935126021183"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,11]]},"references-count":78,"alternative-id":["S0013935126021183"],"URL":"https:\/\/doi.org\/10.1016\/j.envres.2026.125787","relation":{},"ISSN":["0013-9351"],"issn-type":[{"value":"0013-9351","type":"print"}],"subject":[],"published":{"date-parts":[[2026,11]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Enhancement of activated sludge biofilm formation and microbial community modulation by exogenous amino acid supplementation under different environmental conditions","name":"articletitle","label":"Article Title"},{"value":"Environmental Research","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.envres.2026.125787","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 Elsevier Inc. All rights are reserved, including those for text and data mining, AI training, and similar technologies.","name":"copyright","label":"Copyright"}],"article-number":"125787"}}