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U.S.A."},{"key":"10.1016\/j.fgb.2014.01.008_b0440","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1038\/35083594","article-title":"The glyoxylate cycle is required for fungal virulence","volume":"412","author":"Lorenz","year":"2001","journal-title":"Nature"},{"key":"10.1016\/j.fgb.2014.01.008_b0445","doi-asserted-by":"crossref","first-page":"1076","DOI":"10.1128\/EC.3.5.1076-1087.2004","article-title":"Transcriptional response of Candida albicans upon internalization by macrophages","volume":"3","author":"Lorenz","year":"2004","journal-title":"Eukaryot. Cell"},{"key":"10.1016\/j.fgb.2014.01.008_b0450","doi-asserted-by":"crossref","first-page":"208","DOI":"10.1016\/j.lab.2004.07.007","article-title":"Fungal susceptibility to zinc deprivation","volume":"144","author":"Lulloff","year":"2004","journal-title":"J. Lab. Clin. 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Med."},{"key":"10.1016\/j.fgb.2014.01.008_b0700","doi-asserted-by":"crossref","first-page":"e43773","DOI":"10.1371\/journal.pone.0043773","article-title":"Zap1 regulates zinc homeostasis and modulates virulence in Cryptococcus gattii","volume":"7","author":"Schneider","year":"2012","journal-title":"PLoS One"},{"key":"10.1016\/j.fgb.2014.01.008_b0705","doi-asserted-by":"crossref","first-page":"19258","DOI":"10.1073\/pnas.0806431105","article-title":"In vitro unfolding of yeast multicopper oxidase Fet3p variants reveals unique role of each metal site","volume":"105","author":"Sedl\u00e1k","year":"2008","journal-title":"PNAS"},{"key":"10.1016\/j.fgb.2014.01.008_b0710","first-page":"149","article-title":"GAPDH, as a virulence factor","volume":"985","author":"Seidler","year":"2013","journal-title":"GAPDH: Biol. Propert. Divers. Adv. Exp. Med. 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