{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,31]],"date-time":"2026-08-31T15:14:42Z","timestamp":1788189282687,"version":"build-2803163510"},"reference-count":43,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2027,1,1]],"date-time":"2027-01-01T00:00:00Z","timestamp":1798761600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2027,1,1]],"date-time":"2027-01-01T00:00:00Z","timestamp":1798761600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2027,1,1]],"date-time":"2027-01-01T00:00:00Z","timestamp":1798761600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2027,1,1]],"date-time":"2027-01-01T00:00:00Z","timestamp":1798761600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2027,1,1]],"date-time":"2027-01-01T00:00:00Z","timestamp":1798761600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2027,1,1]],"date-time":"2027-01-01T00:00:00Z","timestamp":1798761600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2027,1,1]],"date-time":"2027-01-01T00:00:00Z","timestamp":1798761600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"funder":[{"DOI":"10.13039\/501100018537","name":"National Science and Technology Major Project","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100018537","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100013076","name":"National Major Science and Technology Projects of China","doi-asserted-by":"publisher","award":["2025ZD01901200"],"award-info":[{"award-number":["2025ZD01901200"]}],"id":[{"id":"10.13039\/501100013076","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Food Microbiology"],"published-print":{"date-parts":[[2027,1]]},"DOI":"10.1016\/j.fm.2026.105236","type":"journal-article","created":{"date-parts":[[2026,7,13]],"date-time":"2026-07-13T23:05:26Z","timestamp":1783983926000},"page":"105236","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"special_numbering":"C","title":["Genomic insights into Salmonella enterica serovar Corvallis from China 2014-2023: A foodborne bacterial pathogen for antimicrobial resistance carriage and potential global transmission"],"prefix":"10.1016","volume":"141","author":[{"given":"Shaofei","family":"Yan","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ke","family":"Wu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Meng","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dongmei","family":"Tan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Li","family":"Zhan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bosheng","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xiaorong","family":"Yang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zushun","family":"Yang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Weiwei","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yunchang","family":"Guo","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4602-525X","authenticated-orcid":false,"given":"Changwei","family":"Lei","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.fm.2026.105236_bib1","doi-asserted-by":"crossref","first-page":"192","DOI":"10.1089\/mdr.2006.12.192","article-title":"Molecular characterization and occurrence of extended-spectrum beta-lactamase resistance genes among Salmonella enterica serovar Corvallis from Thailand, Bulgaria, and Denmark","volume":"12","author":"Archambault","year":"2006","journal-title":"Microb. Drug Resist."},{"key":"10.1016\/j.fm.2026.105236_bib3","doi-asserted-by":"crossref","first-page":"766","DOI":"10.1017\/S0950268816002867","article-title":"Antimicrobial resistance in Salmonella that caused foodborne disease outbreaks: united States, 2003-2012","volume":"145","author":"Brown","year":"2017","journal-title":"Epidemiol. Infect."},{"key":"10.1016\/j.fm.2026.105236_bib4","doi-asserted-by":"crossref","first-page":"704","DOI":"10.1093\/jac\/dkm261","article-title":"Plasmid-mediated quinolone resistance determinant qnrS1 detected in Salmonella enterica serovar Corvallis strains isolated in Denmark and Thailand","volume":"60","author":"Cavaco","year":"2007","journal-title":"J. Antimicrob. Chemother."},{"key":"10.1016\/j.fm.2026.105236_bib5","doi-asserted-by":"crossref","first-page":"i884","DOI":"10.1093\/bioinformatics\/bty560","article-title":"Fastp: an ultra-fast all-in-one FASTQ preprocessor","volume":"34","author":"Chen","year":"2018","journal-title":"Bioinformatics"},{"key":"10.1016\/j.fm.2026.105236_bib6","doi-asserted-by":"crossref","first-page":"1224","DOI":"10.1093\/molbev\/mst028","article-title":"Hierarchical and spatially explicit clustering of DNA sequences with BAPS software","volume":"30","author":"Cheng","year":"2013","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.fm.2026.105236_bib7","doi-asserted-by":"crossref","DOI":"10.1093\/nar\/gky783","article-title":"Bayesian inference of ancestral dates on bacterial phylogenetic trees","volume":"46","author":"Didelot","year":"2018","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.fm.2026.105236_bib8","doi-asserted-by":"crossref","first-page":"138","DOI":"10.1111\/j.1469-0691.2004.01045.x","article-title":"Travel-associated non-typhoidal salmonellosis: geographical and seasonal differences and serotype distribution","volume":"11","author":"Ekdahl","year":"2005","journal-title":"Clin. Microbiol. Infect."},{"key":"10.1016\/j.fm.2026.105236_bib9","doi-asserted-by":"crossref","first-page":"732","DOI":"10.1093\/cid\/ciac035","article-title":"Invasive non-typhoidal salmonella (iNTS) infections","volume":"75","author":"Fierer","year":"2022","journal-title":"Clin. Infect. Dis."},{"key":"10.1016\/j.fm.2026.105236_bib10","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pcbi.1010310","article-title":"Graphia: a platform for the graph-based visualisation and analysis of high dimensional data","volume":"18","author":"Freeman","year":"2022","journal-title":"PLoS Comput. Biol."},{"key":"10.1016\/j.fm.2026.105236_bib11","doi-asserted-by":"crossref","first-page":"1072","DOI":"10.1093\/bioinformatics\/btt086","article-title":"QUAST: quality assessment tool for genome assemblies","volume":"29","author":"Gurevich","year":"2013","journal-title":"Bioinformatics"},{"key":"10.1016\/j.fm.2026.105236_bib12","doi-asserted-by":"crossref","DOI":"10.1128\/mmbr.00119-22","article-title":"IS26 and the IS26 family: versatile resistance gene movers and genome reorganizers","volume":"88","author":"Harmer","year":"2024","journal-title":"Microbiol. Mol. Biol. Rev."},{"key":"10.1016\/j.fm.2026.105236_bib13","doi-asserted-by":"crossref","DOI":"10.1080\/22221751.2025.2542251","article-title":"Plasmid-driven clonal expansion of multidrug-resistant monophasic Salmonella Typhimurium in a Global food Trade Hub","volume":"14","author":"Huang","year":"2025","journal-title":"Emerg. Microb. Infect."},{"key":"10.1016\/j.fm.2026.105236_bib14","doi-asserted-by":"crossref","first-page":"321","DOI":"10.4315\/0362-028X.JFP-15-023","article-title":"Combating antimicrobial resistance in foodborne microorganisms","volume":"79","author":"Lai","year":"2016","journal-title":"J. Food Protect."},{"key":"10.1016\/j.fm.2026.105236_bib15","doi-asserted-by":"crossref","first-page":"550","DOI":"10.1093\/jac\/dkac420","article-title":"IS26-mediated in vivo acquisition of blaKPC-2 in an ST11-K64 Klebsiella pneumoniae isolate from a senile inpatient","volume":"78","author":"Li","year":"2023","journal-title":"J. Antimicrob. Chemother."},{"key":"10.1016\/j.fm.2026.105236_bib16","doi-asserted-by":"crossref","DOI":"10.1016\/j.onehlt.2022.100469","article-title":"The vertical transmission of Salmonella Enteritidis in a One-Health context","volume":"16","author":"Liu","year":"2023","journal-title":"One Health"},{"key":"10.1016\/j.fm.2026.105236_bib17","doi-asserted-by":"crossref","DOI":"10.1042\/BSR20221037","article-title":"Whole-genome survey and phylogenetic analysis of Gadus macrocephalus","volume":"42","author":"Ma","year":"2022","journal-title":"Biosci. Rep."},{"key":"10.1016\/j.fm.2026.105236_bib18","doi-asserted-by":"crossref","DOI":"10.1016\/j.ijfoodmicro.2020.108859","article-title":"Antimicrobial resistance and molecular characterization of Salmonella enterica serovar Corvallis isolated from human patients and animal source foods in China","volume":"335","author":"Ma","year":"2020","journal-title":"Int. J. Food Microbiol."},{"key":"10.1016\/j.fm.2026.105236_bib19","doi-asserted-by":"crossref","first-page":"882","DOI":"10.1086\/650733","article-title":"The global burden of nontyphoidal Salmonella gastroenteritis","volume":"50","author":"Majowicz","year":"2010","journal-title":"Clin. Infect. Dis."},{"key":"10.1016\/j.fm.2026.105236_bib20","doi-asserted-by":"crossref","DOI":"10.1128\/MRA.01025-19","article-title":"Genome sequence of a Salmonella enterica subsp. enterica Serovar Corvallis Strain isolated from human blood","volume":"8","author":"McCutchen","year":"2019","journal-title":"Microbiol. Resour. Announc."},{"key":"10.1016\/j.fm.2026.105236_bib21","doi-asserted-by":"crossref","first-page":"1530","DOI":"10.1093\/molbev\/msaa015","article-title":"IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era","volume":"37","author":"Minh","year":"2020","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.fm.2026.105236_bib22","first-page":"6808","article-title":"Pulsed-field profile diversities of Salmonella Enteritidis, S. Infantis, and S. Corvallis in Japan","volume":"6","author":"Murakami","year":"2017","journal-title":"Ital J Food Saf"},{"key":"10.1016\/j.fm.2026.105236_bib23","doi-asserted-by":"crossref","DOI":"10.1099\/acmi.0.000009","article-title":"A case of primary bacteraemia caused by Salmonella enterica serovar Corvallis in an immunocompetent adult after travel to Southeast Asia","volume":"1","author":"Nakakubo","year":"2019","journal-title":"Access Microbiol"},{"key":"10.1016\/j.fm.2026.105236_bib24","doi-asserted-by":"crossref","first-page":"3691","DOI":"10.1093\/bioinformatics\/btv421","article-title":"Roary: rapid large-scale prokaryote pan genome analysis","volume":"31","author":"Page","year":"2015","journal-title":"Bioinformatics"},{"key":"10.1016\/j.fm.2026.105236_bib25","article-title":"SNP-sites: rapid efficient extraction of SNPs from multi-FASTA alignments","volume":"2","author":"Page","year":"2016","journal-title":"Microb. Genom."},{"key":"10.1016\/j.fm.2026.105236_bib26","doi-asserted-by":"crossref","first-page":"1043","DOI":"10.1101\/gr.186072.114","article-title":"CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes","volume":"25","author":"Parks","year":"2015","journal-title":"Genome Res."},{"key":"10.1016\/j.fm.2026.105236_bib27","doi-asserted-by":"crossref","DOI":"10.3390\/pathogens13121046","article-title":"Systematic review of the occurrence and antimicrobial resistance profile of foodborne pathogens from Enterobacteriaceae in wild ungulates within the European countries","volume":"13","author":"Patrinjan","year":"2024","journal-title":"Pathogens"},{"key":"10.1016\/j.fm.2026.105236_bib28","doi-asserted-by":"crossref","first-page":"1010","DOI":"10.1016\/j.meegid.2009.05.014","article-title":"Phylogenetic understanding of clonal populations in an era of whole genome sequencing","volume":"9","author":"Pearson","year":"2009","journal-title":"Infect. Genet. Evol."},{"key":"10.1016\/j.fm.2026.105236_bib29","doi-asserted-by":"crossref","DOI":"10.1128\/MMBR.00027-19","article-title":"Salmonella versus the microbiome","volume":"85","author":"Rogers","year":"2021","journal-title":"Microbiol. Mol. Biol. Rev."},{"key":"10.1016\/j.fm.2026.105236_bib30","doi-asserted-by":"crossref","DOI":"10.1099\/acmi.0.000315","article-title":"A case report of Salmonella enterica serovar Corvallis from environmental isolates from Cambodia and clinical isolates in the UK","volume":"4","author":"Schwan","year":"2022","journal-title":"Access Microbiol"},{"key":"10.1016\/j.fm.2026.105236_bib31","doi-asserted-by":"crossref","first-page":"2068","DOI":"10.1093\/bioinformatics\/btu153","article-title":"Prokka: rapid prokaryotic genome annotation","volume":"30","author":"Seemann","year":"2014","journal-title":"Bioinformatics"},{"key":"10.1016\/j.fm.2026.105236_bib32","doi-asserted-by":"crossref","DOI":"10.1038\/s41598-024-67705-3","article-title":"Foodborne bacteria in milk and milk products along the water buffalo milk chain in Bangladesh","volume":"14","author":"Singha","year":"2024","journal-title":"Sci. Rep."},{"key":"10.1016\/j.fm.2026.105236_bib33","doi-asserted-by":"crossref","first-page":"312","DOI":"10.7883\/yoken.JJID.2009.312","article-title":"Plasmid-mediated quinolone resistance in Salmonella isolated from patients with overseas travelers' diarrhea in Japan","volume":"62","author":"Taguchi","year":"2009","journal-title":"Jpn. J. Infect. Dis."},{"key":"10.1016\/j.fm.2026.105236_bib34","doi-asserted-by":"crossref","DOI":"10.3390\/microorganisms10030579","article-title":"Plasmid-Mediated quinolone resistance (PMQR) in two clinical strains of Salmonella enterica Serovar Corvallis","volume":"10","author":"Vazquez","year":"2022","journal-title":"Microorganisms"},{"key":"10.1016\/j.fm.2026.105236_bib35","doi-asserted-by":"crossref","DOI":"10.3390\/pathogens13110919","article-title":"Investigation of the Antimicrobial Resistance of Important Pathogens isolated from Poultry from 2015 to 2023 in the United States","volume":"13","author":"Wang","year":"2024","journal-title":"Pathogens"},{"key":"10.1016\/j.fm.2026.105236_bib36","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pcbi.1005595","article-title":"Unicycler: resolving bacterial genome assemblies from short and long sequencing reads","volume":"13","author":"Wick","year":"2017","journal-title":"PLoS Comput. Biol."},{"key":"10.1016\/j.fm.2026.105236_bib37","doi-asserted-by":"crossref","DOI":"10.1002\/imo2.38","article-title":"Genomic adaptation of Clostridium perfringens to human intestine","volume":"1","author":"Wu","year":"2024","journal-title":"iMetaOmics"},{"key":"10.1016\/j.fm.2026.105236_bib38","doi-asserted-by":"crossref","DOI":"10.1016\/j.jhazmat.2025.140475","article-title":"A one Health perspective: genomic insights into temporal trends of antimicrobial resistance and zoonotic transmission risks in Escherichia coli from human and swine","volume":"500","author":"Wu","year":"2025","journal-title":"J. Hazard Mater."},{"key":"10.1016\/j.fm.2026.105236_bib39","doi-asserted-by":"crossref","DOI":"10.1016\/j.vetmic.2025.110593","article-title":"Emergence and traceability of Salmonella enterica serotype Mbandaka harboring bla(OXA-10) from chickens in China","volume":"307","author":"Wu","year":"2025","journal-title":"Vet. Microbiol."},{"key":"10.1016\/j.fm.2026.105236_bib40","doi-asserted-by":"crossref","first-page":"7227","DOI":"10.2147\/IDR.S390765","article-title":"IS26-Mediated Formation of a hybrid plasmid carrying mcr-1.1","volume":"15","author":"Wu","year":"2022","journal-title":"Infect. Drug Resist."},{"key":"10.1016\/j.fm.2026.105236_bib41","doi-asserted-by":"crossref","first-page":"1161","DOI":"10.3855\/jidc.5634","article-title":"Clonal relatedness and resistance patterns of Salmonella Corvallis from poultry carcasses in a Brazilian slaughterhouse","volume":"9","author":"Yamatogi","year":"2015","journal-title":"J. Infect. Dev. Ctries."},{"key":"10.1016\/j.fm.2026.105236_bib42","first-page":"1252","article-title":"Bla (NDM-1) carried by a transferable plasmid in a salmonella strain isolated from healthy individuals","volume":"37","author":"Zeng","year":"2024","journal-title":"Biomed. Environ. Sci."},{"key":"10.1016\/j.fm.2026.105236_bib43","doi-asserted-by":"crossref","DOI":"10.1128\/AEM.01746-19","article-title":"SeqSero2: rapid and improved salmonella serotype determination using whole-genome sequencing data","volume":"85","author":"Zhang","year":"2019","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.fm.2026.105236_bib44","doi-asserted-by":"crossref","DOI":"10.1016\/j.jhazmat.2024.135672","article-title":"Dynamics of antimicrobial resistance and genomic characteristics of foodborne Vibrio spp. in Southern China (2013-2022)","volume":"479","author":"Zheng","year":"2024","journal-title":"J. Hazard Mater."}],"container-title":["Food Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0740002026002005?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0740002026002005?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,8,31]],"date-time":"2026-08-31T14:23:04Z","timestamp":1788186184000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0740002026002005"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2027,1]]},"references-count":43,"alternative-id":["S0740002026002005"],"URL":"https:\/\/doi.org\/10.1016\/j.fm.2026.105236","relation":{},"ISSN":["0740-0020"],"issn-type":[{"value":"0740-0020","type":"print"}],"subject":[],"published":{"date-parts":[[2027,1]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Genomic insights into Salmonella enterica serovar Corvallis from China 2014-2023: A foodborne bacterial pathogen for antimicrobial resistance carriage and potential global transmission","name":"articletitle","label":"Article Title"},{"value":"Food Microbiology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.fm.2026.105236","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 Elsevier Ltd. All rights are reserved, including those for text and data mining, AI training, and similar technologies.","name":"copyright","label":"Copyright"}],"article-number":"105236"}}