{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,12]],"date-time":"2026-07-12T05:54:22Z","timestamp":1783835662856,"version":"3.55.0"},"reference-count":33,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2023,4,1]],"date-time":"2023-04-01T00:00:00Z","timestamp":1680307200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2023,4,1]],"date-time":"2023-04-01T00:00:00Z","timestamp":1680307200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2023,4,1]],"date-time":"2023-04-01T00:00:00Z","timestamp":1680307200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2023,4,1]],"date-time":"2023-04-01T00:00:00Z","timestamp":1680307200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2023,4,1]],"date-time":"2023-04-01T00:00:00Z","timestamp":1680307200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2023,4,1]],"date-time":"2023-04-01T00:00:00Z","timestamp":1680307200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2023,4,1]],"date-time":"2023-04-01T00:00:00Z","timestamp":1680307200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Fish & Shellfish Immunology"],"published-print":{"date-parts":[[2023,4]]},"DOI":"10.1016\/j.fsi.2023.108692","type":"journal-article","created":{"date-parts":[[2023,3,15]],"date-time":"2023-03-15T04:07:01Z","timestamp":1678853221000},"page":"108692","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":15,"special_numbering":"C","title":["Transcriptome-wide identification and characterization of the Macrobrachium rosenbergii microRNAs potentially related to immunity against non-O1 Vibrio cholerae infection"],"prefix":"10.1016","volume":"135","author":[{"given":"Liwen","family":"Zhang","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zheling","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sunan","family":"Xu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xiaojun","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xiaodan","family":"Liu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"issue":"2","key":"10.1016\/j.fsi.2023.108692_bib1","doi-asserted-by":"crossref","first-page":"161","DOI":"10.1016\/0361-9230(95)00083-Q","article-title":"A determined observer","volume":"38","author":"Bentivoglio","year":"1995","journal-title":"Brain Res. Bull."},{"issue":"1","key":"10.1016\/j.fsi.2023.108692_bib2","doi-asserted-by":"crossref","DOI":"10.1080\/19490976.2021.1937015","article-title":"The interface of Vibrio cholerae and the gut microbiome","volume":"13","author":"Cho","year":"2021","journal-title":"Gut Microb."},{"key":"10.1016\/j.fsi.2023.108692_bib3","doi-asserted-by":"crossref","first-page":"199","DOI":"10.1016\/j.aquaculture.2015.12.025","article-title":"An assessment of chemical and biological product use in aquaculture in Bangladesh","volume":"454","author":"Ali","year":"2016","journal-title":"Aquaculture"},{"key":"10.1016\/j.fsi.2023.108692_bib4","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2019.00733","article-title":"Environmental and clinical strains of Vibrio cholerae non-O1, non-O139 from Germany possess similar virulence gene profiles","volume":"10","author":"Schwartz","year":"2019","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.fsi.2023.108692_bib5","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2022.896767","article-title":"Diverse aquatic animal matrices play a key role in survival and potential virulence of non-O1\/O139 Vibrio cholerae isolates","volume":"13","author":"Yan","year":"2022","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.fsi.2023.108692_bib6","doi-asserted-by":"crossref","DOI":"10.1016\/j.aquaculture.2021.737529","article-title":"Molecular identification and pathogenicity study of virulent Vibrio cholerae non O1\/O139 serotype associated with mortality of farmed Labeo rohita (Hamilton, 1822), in India","volume":"547","author":"Devi","year":"2022","journal-title":"Aquaculture"},{"key":"10.1016\/j.fsi.2023.108692_bib7","doi-asserted-by":"crossref","first-page":"139","DOI":"10.3354\/dao03565","article-title":"First case of non-O1\/O139 Vibrio cholerae infection in the pink-tailed chalceus Chalceus macrolepidotus in China","volume":"143","author":"Ni","year":"2021","journal-title":"Dis. Aquat. Org."},{"issue":"8","key":"10.1016\/j.fsi.2023.108692_bib8","doi-asserted-by":"crossref","DOI":"10.3390\/microorganisms8081104","article-title":"Phenotypic and genotypic properties of Vibrio cholerae non-O1, non-O139 isolates recovered from domestic ducks in Germany","volume":"8","author":"Hirsch","year":"2020","journal-title":"Microorganisms"},{"issue":"1","key":"10.1016\/j.fsi.2023.108692_bib9","doi-asserted-by":"crossref","first-page":"55","DOI":"10.1007\/BF03175050","article-title":"Isolation of Vibrio parahaemolyticus and Vibrio cholerae (Non-O1 and 0139) from moribund shrimp (Penaeus monodon) and experimental challenge study against post larvae and juveniles","volume":"57","author":"Haldari","year":"2007","journal-title":"Ann. Microbiol."},{"issue":"4","key":"10.1016\/j.fsi.2023.108692_bib10","doi-asserted-by":"crossref","first-page":"413","DOI":"10.1111\/jfd.13139","article-title":"The composition of the microbial community associated with Macrobrachium rosenbergii zoeae varies throughout larval development","volume":"43","author":"Ma","year":"2020","journal-title":"J. Fish. Dis."},{"key":"10.1016\/j.fsi.2023.108692_bib11","article-title":"The state of world fisheries and aquaculture 2022","year":"2022","journal-title":"Towards Blue Transformation. Rome"},{"key":"10.1016\/j.fsi.2023.108692_bib12","series-title":"Global Shrimp Market Report 2021\u20132026: Production, Export, Import, Consumption, Countries, Species, Product Form, Size, Value Chain Analysis & Forecasts","year":"2021"},{"key":"10.1016\/j.fsi.2023.108692_bib13","series-title":"Communications: bacteria in the hemolymph of the freshwater prawn Macrobrachium rosenbergii","author":"Brady","year":"1992"},{"issue":"4","key":"10.1016\/j.fsi.2023.108692_bib14","doi-asserted-by":"crossref","first-page":"278","DOI":"10.1006\/jipa.2000.4981","article-title":"Responses of giant freshwater prawn (Macrobrachium rosenbergii) to challenge by two strains of Aeromonas spp","volume":"76","author":"Sung","year":"2000","journal-title":"J. Invertebr. Pathol."},{"issue":"8","key":"10.1016\/j.fsi.2023.108692_bib15","doi-asserted-by":"crossref","DOI":"10.3390\/antiox11081491","article-title":"A novel disease (water bubble disease) of the giant freshwater prawn Macrobrachium rosenbergii caused by Citrobacter freundii: antibiotic treatment and effects on the antioxidant enzyme activity and immune responses","volume":"11","author":"Zhao","year":"2022","journal-title":"Antioxidants"},{"key":"10.1016\/j.fsi.2023.108692_bib16","doi-asserted-by":"crossref","first-page":"300","DOI":"10.1016\/j.fsi.2019.06.032","article-title":"Pathogenicity of non-O1\/O139 Vibrio cholerae and its induced immune response in Macrobrachium rosenbergii","volume":"92","author":"Gao","year":"2019","journal-title":"Fish Shellfish Immunol."},{"issue":"2","key":"10.1016\/j.fsi.2023.108692_bib17","doi-asserted-by":"crossref","DOI":"10.3390\/ijms17020154","article-title":"Identification and characterization of MicroRNAs in snakehead fish cell line upon snakehead fish vesiculovirus infection","volume":"17","author":"Liu","year":"2016","journal-title":"Int. J. Mol. Sci."},{"issue":"3","key":"10.1016\/j.fsi.2023.108692_bib18","doi-asserted-by":"crossref","DOI":"10.1128\/microbiolspec.BAI-0002-2019","article-title":"Multifaceted roles of microRNAs in host-bacterial pathogen interaction","volume":"7","author":"Aguilar","year":"2019","journal-title":"Microbiol. Spectr."},{"key":"10.1016\/j.fsi.2023.108692_bib19","doi-asserted-by":"crossref","DOI":"10.3389\/fimmu.2018.02184","article-title":"White spot syndrome virus-induced shrimp miR-315 attenuates prophenoloxidase activation via PPAE3 gene suppression","volume":"9","author":"Jaree","year":"2018","journal-title":"Front. Immunol."},{"key":"10.1016\/j.fsi.2023.108692_bib20","doi-asserted-by":"crossref","first-page":"129","DOI":"10.1016\/j.antiviral.2014.05.013","article-title":"Antiviral defense in shrimp: from innate immunity to viral infection","volume":"108","author":"Wang","year":"2014","journal-title":"Antivir. Res."},{"key":"10.1016\/j.fsi.2023.108692_bib22","unstructured":"Rfam 12.0: updates to the RNA families database. Eric P. Nawrocki, Sarah W. Burge, Alex Bateman, Jennifer Daub, Ruth Y. Eberhardt, Sean R. Eddy, Evan W. Floden, Paul P. Gardner, Thomas A. Jones, John Tate and Robert D. Finn."},{"key":"10.1016\/j.fsi.2023.108692_bib23","doi-asserted-by":"crossref","first-page":"D68","DOI":"10.1093\/nar\/gkt1181","article-title":"miRBase: annotating high confidence microRNAs using deep sequencing data","volume":"42","author":"Kozomara","year":"2014","journal-title":"NAR"},{"key":"10.1016\/j.fsi.2023.108692_bib25","doi-asserted-by":"crossref","DOI":"10.3389\/fimmu.2022.856457","article-title":"Advances in the immune regulatory role of non-coding RNAs (miRNAs and lncRNAs) in insect-pathogen interactions","volume":"13","author":"Moure","year":"2022","journal-title":"Front. Immunol."},{"issue":"2","key":"10.1016\/j.fsi.2023.108692_bib26","doi-asserted-by":"crossref","first-page":"287","DOI":"10.1016\/j.dci.2014.08.004","article-title":"Cellular immune responses against viral pathogens in shrimp","volume":"47","author":"Xu","year":"2014","journal-title":"Dev. Comp. Immunol."},{"issue":"3","key":"10.1016\/j.fsi.2023.108692_bib27","doi-asserted-by":"crossref","first-page":"239","DOI":"10.1006\/jipa.1996.0091","article-title":"Cytopathology of Bay of Piran shrimp virus (BPSV), a new crustacean virus from the Mediterranean Sea","volume":"68","author":"Vogt","year":"1996","journal-title":"J. Invertebr. Pathol."},{"issue":"4","key":"10.1016\/j.fsi.2023.108692_bib28","doi-asserted-by":"crossref","first-page":"954","DOI":"10.1016\/j.fsi.2012.09.021","article-title":"Discovery of immune molecules and their crucial functions in shrimp immunity","volume":"34","author":"Tassanakajon","year":"2013","journal-title":"Fish Shellfish Immunol."},{"key":"10.1016\/j.fsi.2023.108692_bib29","doi-asserted-by":"crossref","DOI":"10.3389\/fimmu.2021.807093","article-title":"Integrated analysis of mRNA-Seq and miRNA-Seq reveals the molecular mechanism of the intestinal immune response in Marsupenaeus japonicus under decapod iridescent virus 1 infection","volume":"12","author":"He","year":"2022","journal-title":"Front. Immunol."},{"issue":"4","key":"10.1016\/j.fsi.2023.108692_bib30","doi-asserted-by":"crossref","first-page":"2551","DOI":"10.1074\/jbc.M009728200","article-title":"Human Nod1 confers responsiveness to bacterial lipopolysaccharides","volume":"276","author":"Inohara","year":"2001","journal-title":"J. Biol. Chem."},{"issue":"5625","key":"10.1016\/j.fsi.2023.108692_bib31","doi-asserted-by":"crossref","first-page":"1584","DOI":"10.1126\/science.1084677","article-title":"Nod1 detects a unique muropeptide from Gram-negative bacterial peptidoglycan","volume":"300","author":"Girardin","year":"2003","journal-title":"Science"},{"issue":"34","key":"10.1016\/j.fsi.2023.108692_bib32","doi-asserted-by":"crossref","first-page":"13910","DOI":"10.1073\/pnas.1303275110","article-title":"Efficient influenza A virus replication in the respiratory tract requires signals from TLR7 and RIG-I","volume":"110","author":"Pang","year":"2013","journal-title":"Proc. Natl. Acad. Sci. U. S. A"},{"key":"10.1016\/j.fsi.2023.108692_bib33","doi-asserted-by":"crossref","first-page":"106","DOI":"10.1016\/j.coi.2015.01.009","article-title":"Sensing viral RNAs by Dicer\/RIG-I like ATPases across species","volume":"32","author":"Paro","year":"2015","journal-title":"Curr. Opin. Immunol."},{"key":"10.1016\/j.fsi.2023.108692_bib34","doi-asserted-by":"crossref","first-page":"109","DOI":"10.1016\/j.fsi.2020.12.003","article-title":"Identification and characterization of a Toll-like receptor gene from Macrobrachium nipponense","volume":"108","author":"Cho","year":"2021","journal-title":"Fish Shellfish Immunol."},{"issue":"2","key":"10.1016\/j.fsi.2023.108692_bib35","doi-asserted-by":"crossref","first-page":"239","DOI":"10.1111\/jfd.12354","article-title":"Molecular cloning of Salmo salar Toll-like receptors (TLR1, TLR22, TLR5M and TLR5S) and expression analysis in SHK-1 cells during Piscirickettsia salmonis infection","volume":"39","author":"Salazar","year":"2016","journal-title":"J. Fish. Dis."}],"container-title":["Fish & Shellfish Immunology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S105046482300178X?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S105046482300178X?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,10,20]],"date-time":"2025-10-20T05:42:16Z","timestamp":1760938936000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S105046482300178X"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,4]]},"references-count":33,"alternative-id":["S105046482300178X"],"URL":"https:\/\/doi.org\/10.1016\/j.fsi.2023.108692","relation":{},"ISSN":["1050-4648"],"issn-type":[{"value":"1050-4648","type":"print"}],"subject":[],"published":{"date-parts":[[2023,4]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Transcriptome-wide identification and characterization of the Macrobrachium rosenbergii microRNAs potentially related to immunity against non-O1 Vibrio cholerae infection","name":"articletitle","label":"Article Title"},{"value":"Fish & Shellfish Immunology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.fsi.2023.108692","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2023 Elsevier Ltd. All rights reserved.","name":"copyright","label":"Copyright"}],"article-number":"108692"}}