{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,4]],"date-time":"2026-07-04T02:17:41Z","timestamp":1783131461382,"version":"3.54.6"},"reference-count":93,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T00:00:00Z","timestamp":1782864000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T00:00:00Z","timestamp":1782864000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T00:00:00Z","timestamp":1782864000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T00:00:00Z","timestamp":1782864000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T00:00:00Z","timestamp":1782864000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T00:00:00Z","timestamp":1782864000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T00:00:00Z","timestamp":1782864000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"funder":[{"DOI":"10.13039\/501100003182","name":"Siberian Branch, Russian Academy of Sciences","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100003182","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100006769","name":"Russian Science Foundation","doi-asserted-by":"publisher","award":["25-24-00652"],"award-info":[{"award-number":["25-24-00652"]}],"id":[{"id":"10.13039\/501100006769","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Fish & Shellfish Immunology"],"published-print":{"date-parts":[[2026,7]]},"DOI":"10.1016\/j.fsi.2026.111351","type":"journal-article","created":{"date-parts":[[2026,4,25]],"date-time":"2026-04-25T23:58:02Z","timestamp":1777161482000},"page":"111351","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"special_numbering":"C","title":["Differential transcriptomic analysis of the head kidney in Coregonus migratorius naturally infected with Dibothriocephalus dendriticus"],"prefix":"10.1016","volume":"174","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-2676-3252","authenticated-orcid":false,"given":"Olga Evgenievna","family":"Mazur","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1119-6267","authenticated-orcid":false,"given":"Ivan Alexandrovich","family":"Kutyrev","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3196-5270","authenticated-orcid":false,"given":"Tuyana Valeryevna","family":"Sidorova","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1550-1468","authenticated-orcid":false,"given":"Lubov Vasilyevna","family":"Sukhanova","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.fsi.2026.111351_bib1","doi-asserted-by":"crossref","first-page":"245","DOI":"10.3390\/ijms19010245","article-title":"Transcriptome analysis based on RNA-Seq in understanding pathogenic mechanisms of diseases and the immune system of fish: a comprehensive review","volume":"19","author":"Sudhagar","year":"2018","journal-title":"Int. J. Mol. Sci."},{"key":"10.1016\/j.fsi.2026.111351_bib2","doi-asserted-by":"crossref","first-page":"1179","DOI":"10.3390\/pathogens10091179","article-title":"Intestinal transcriptomic and histologic profiling reveals tissue repair mechanisms underlying resistance to the parasite Ceratonova shasta","volume":"10","author":"Barrett","year":"2021","journal-title":"Pathogens"},{"key":"10.1016\/j.fsi.2026.111351_bib3","article-title":"Exploring gene expression patterns and evolutionary responses in host-parasite interactions: insights from the Schistocephalus solidus \u2013 threespine stickleback system","author":"Wohlleben","year":"2023","journal-title":"bioRxiv"},{"key":"10.1016\/j.fsi.2026.111351_bib4","doi-asserted-by":"crossref","first-page":"264","DOI":"10.1134\/S1062359013050038","article-title":"Dynamics of parasite communities in an age series of Baikal omul Coregonus migratorius (Georgi, 1775)","volume":"41","author":"Dugarov","year":"2014","journal-title":"Biol. Bull. Russ. Acad. Sci."},{"key":"10.1016\/j.fsi.2026.111351_bib5","first-page":"359","article-title":"Broad tapeworms (Diphyllobothriidae), parasites of wildlife and humans: recent progress and future challenges","volume":"9","author":"Scholz","year":"2019","journal-title":"Int. J. Parasitol.: Parasites Wildl."},{"key":"10.1016\/j.fsi.2026.111351_bib6","doi-asserted-by":"crossref","first-page":"831","DOI":"10.1016\/j.ijpara.2017.06.004","article-title":"The catholic taste of broad tapeworms \u2013 multiple routes to human infection","volume":"47","author":"Waeschenbach","year":"2017","journal-title":"Int. J. Parasitol."},{"key":"10.1016\/j.fsi.2026.111351_bib7","doi-asserted-by":"crossref","first-page":"56","DOI":"10.33092\/0025-8326mp2020.2.56-61","article-title":"Diphyllobothriases: current situation, recent advances and challenges. Algorithm of diagnosis and treatment","volume":"2","author":"Bronstein","year":"2020","journal-title":"Med. Parazitol. Parazit. Bolezn."},{"key":"10.1016\/j.fsi.2026.111351_bib8","doi-asserted-by":"crossref","first-page":"3","DOI":"10.33092\/0025-8326mp2023.2.3-13","article-title":"Current situation of parasitic diseases in the Russian Federation: global challenges and ways to solve","volume":"2","author":"Stepanova","year":"2023","journal-title":"Med. Parazitol. Parazit. Bolezn."},{"key":"10.1016\/j.fsi.2026.111351_bib9","doi-asserted-by":"crossref","first-page":"782","DOI":"10.3390\/genes11070782","article-title":"Development of 14 microsatellite markers for zoonotic tapeworm Dibothriocephalus dendriticus (Cestoda: diphyllobothriidea)","volume":"11","author":"Bazsalovicsov\u00e1","year":"2020","journal-title":"Genes"},{"key":"10.1016\/j.fsi.2026.111351_bib10","series-title":"Relationships in the Worms \u2013 Fish System (On the Tissue, Organ, and Organism Levels)","author":"Pronina","year":"1988"},{"key":"10.1016\/j.fsi.2026.111351_bib11","doi-asserted-by":"crossref","first-page":"169","DOI":"10.1017\/S0031182000060911","article-title":"Sequential development of the immune response in rainbow trout (Oncorhynchus mykiss (Walbaum, 1792)) to experimental plerocercoid infections of Diphyllobothrium dendriticum (Nitzsch, 1824)","volume":"104","author":"Sharp","year":"1992","journal-title":"Parasitology"},{"key":"10.1016\/j.fsi.2026.111351_bib12","doi-asserted-by":"crossref","first-page":"471","DOI":"10.1111\/j.1365-2761.2007.00833.x","article-title":"Selected pathological, immunohistochemical and ultrastructural changes associated with an infection by Diphyllobothrium dendriticum (Nitzsch, 1824) (Cestoda) plerocercoids in Coregonus lavaretus (L.) (Coregonidae)","volume":"30","author":"Dezfuli","year":"2007","journal-title":"J. Fish. Dis."},{"key":"10.1016\/j.fsi.2026.111351_bib13","doi-asserted-by":"crossref","first-page":"367","DOI":"10.1134\/S0012496611060019","article-title":"The tapeworm Diphyllobothrium dendriticum (Cestoda) produces prostaglandin E2, a regulator of host immunity","volume":"441","author":"Biserova","year":"2011","journal-title":"Dokl. Biol. Sci."},{"key":"10.1016\/j.fsi.2026.111351_bib14","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1016\/j.molbiopara.2017.01.006","article-title":"Prostaglandins E2 and D2 \u2013 regulators of host immunity in the model parasite Diphyllobothrium dendriticum: an immunocytochemical and biochemical study","volume":"212","author":"Kutyrev","year":"2017","journal-title":"Mol. Biochem. Parasitol."},{"key":"10.1016\/j.fsi.2026.111351_bib15","doi-asserted-by":"crossref","first-page":"145","DOI":"10.1007\/s00436-022-07708-z","article-title":"Comparative transcriptomic analysis of the larval and adult stages of Dibothriocephalus dendriticus (Cestoda: diphyllobothriidea)","volume":"122","author":"Sidorova","year":"2022","journal-title":"Parasitol. Res."},{"key":"10.1016\/j.fsi.2026.111351_bib16","doi-asserted-by":"crossref","first-page":"139","DOI":"10.3354\/dao02626","article-title":"Parasitic infection by larval helminths in Antarctic fishes: pathological changes and impact on the host body condition index","volume":"105","author":"Santoro","year":"2013","journal-title":"Dis. Aquat. Org."},{"key":"10.1016\/j.fsi.2026.111351_bib17","article-title":"Teleost innate immunity, an intricate game between immune cells and parasites of fish organs: who wins, who loses","volume":"14","author":"Dezfuli","year":"2023","journal-title":"Front. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib18","doi-asserted-by":"crossref","first-page":"1369","DOI":"10.1134\/S1062359024607432","article-title":"Leukocyte composition of the organs of the immune system of Coregonus migratorius infected with Dibothriocephalus dendriticus","volume":"51","author":"Mazur","year":"2024","journal-title":"Biol. Bull. Russ. Acad. Sci."},{"key":"10.1016\/j.fsi.2026.111351_bib19","first-page":"352","article-title":"Selenginskaya populyatsiya baikal\u2019skogo omulya: proshloe, nastoyashchee, budushchee [Selenga Population of Baikal Omul: Past, Present, and Future]","author":"Bazov","year":"2016","journal-title":"BNTs SO RAN, Ulan-Ude"},{"key":"10.1016\/j.fsi.2026.111351_bib20","doi-asserted-by":"crossref","first-page":"76","DOI":"10.17150\/2500-4255.2020.14(1).76-86","article-title":"Mathematical modeling in researching the complex determinants of illegal fishing of water bio-resources (the omul fish) in Lake Baikal","volume":"14","author":"Sukhodolov","year":"2020","journal-title":"Russ. J. Criminol."},{"key":"10.1016\/j.fsi.2026.111351_bib21","first-page":"98","article-title":"Testing method quantitative eDNA analysis for stock assessment and monitoring of Baikal omul populations","volume":"6","author":"Kirilchik","year":"2018","journal-title":"Int. J. Appl. Fundam. Res."},{"key":"10.1016\/j.fsi.2026.111351_bib22","article-title":"Differences in brain transcriptomes of closely related Baikal coregonid species","volume":"2014","author":"Bychenko","year":"2014","journal-title":"J. Biomed. Biotechnol."},{"key":"10.1016\/j.fsi.2026.111351_bib23","doi-asserted-by":"crossref","first-page":"414","DOI":"10.1080\/23802359.2019.1703565","article-title":"Complete mitochondrial genomes of Baikal endemic coregonids: omul and lacustrine whitefish (Salmonidae: coregonus sp.)","volume":"5","author":"Teterina","year":"2020","journal-title":"Mitochondrial DNA Part B"},{"key":"10.1016\/j.fsi.2026.111351_bib24","doi-asserted-by":"crossref","first-page":"117","DOI":"10.1134\/S1062359015020065","article-title":"Cytomorphological and biochemical characteristics of the whitefish, Baikal omul Coregonus migratorius, infected by plerocercoids of Diphyllobothrium dendriticum (Cestoda: pseudophyllidae)","volume":"42","author":"Mazur","year":"2015","journal-title":"Biol. Bull."},{"key":"10.1016\/j.fsi.2026.111351_bib25","doi-asserted-by":"crossref","first-page":"188","DOI":"10.1134\/S1995425516020098","article-title":"Lipid composition in muscle and liver of sympatric coregonid fishes from Lake Baikal (Coregonus spp.) under common garden experiment","volume":"9","author":"Vasilyeva","year":"2016","journal-title":"Contemp. Probl. Ecol."},{"key":"10.1016\/j.fsi.2026.111351_bib26","doi-asserted-by":"crossref","first-page":"84","DOI":"10.36038\/2307-3497-2020-181-84-91","article-title":"Features of hematological parameters of the Baikal omul in natural and laboratory conditions","volume":"181","author":"Fomina","year":"2020","journal-title":"Tr. VNIRO"},{"key":"10.1016\/j.fsi.2026.111351_bib27","series-title":"Mucosal Health in Aquaculture","first-page":"3","article-title":"Overview of fish immunity","author":"Castro","year":"2015"},{"key":"10.1016\/j.fsi.2026.111351_bib28","series-title":"Advances in Comparative Immunology","first-page":"687","article-title":"Osteichthyes: immune systems of teleosts (Actinopterygii)","author":"Nakanishi","year":"2018"},{"key":"10.1016\/j.fsi.2026.111351_bib29","first-page":"533","article-title":"Immune response of teleost fish to helminth parasite infection","volume":"28","author":"Souza","year":"2019","journal-title":"J. Vet. Res."},{"key":"10.1016\/j.fsi.2026.111351_bib30","doi-asserted-by":"crossref","first-page":"73","DOI":"10.1016\/j.dci.2016.06.025","article-title":"The teleost head kidney: integrating thyroid and immune signaling","volume":"66","author":"Geven","year":"2017","journal-title":"Dev. Comp. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib31","series-title":"Fish Study Guide","author":"Pravdin","year":"1966"},{"key":"10.1016\/j.fsi.2026.111351_bib32","series-title":"Guide to Studying the Age and Growth of Fish","author":"Chugunova","year":"1959"},{"key":"10.1016\/j.fsi.2026.111351_bib33","series-title":"Opredelitel' Parazitov Presnovodnykh Ryb Fauny SSSR. Tom 1. Paraziticheskie Prosteishie [Identification Guide to Parasites of Freshwater Fishes of the USSR Fauna. Vol. 1. Parasitic Protozoa]","author":"Bauer","year":"1984"},{"key":"10.1016\/j.fsi.2026.111351_bib34","series-title":"Tom 2, Chast' 1. Paraziticheskie Mnogokletochnye [Identification Guide to Parasites of Freshwater Fishes of the USSR Fauna. Vol. 2, Part 1. Parasitic Metazoa]","article-title":"Opredelitel' parazitov presnovodnykh ryb fauny SSSR","author":"Bauer","year":"1985"},{"key":"10.1016\/j.fsi.2026.111351_bib35","series-title":"Opredelitel' Parazitov Presnovodnykh Ryb Fauny SSSR: Paraziticheskie Mnogokletochnye [Identification Guide to Parasites of Freshwater Fishes of the USSR Fauna: Parasitic Metazoa]","author":"Bauer","year":"1987"},{"key":"10.1016\/j.fsi.2026.111351_bib36","article-title":"Diphyllobothriidae \u2013 tapeworm helminths of humans, mammals, and birds","volume":"vol. XI","author":"Delyamure","year":"1985"},{"key":"10.1016\/j.fsi.2026.111351_bib37","doi-asserted-by":"crossref","first-page":"113","DOI":"10.3354\/dao03646","article-title":"Population genetic structure of diphyllobothriid tapeworms (Cestoda: diphyllobothriidea) parasitising fish in the Baikal Rift Zone","volume":"148","author":"Kutyrev","year":"2022","journal-title":"Dis. Aquat. Org."},{"key":"10.1016\/j.fsi.2026.111351_bib38","doi-asserted-by":"crossref","first-page":"575","DOI":"10.2307\/3284227","article-title":"Parasitology meets ecology on its own terms: margolis et al. revisited","volume":"83","author":"Bush","year":"1997","journal-title":"J. Parasitol."},{"key":"10.1016\/j.fsi.2026.111351_bib39","series-title":"Report on the Results of the State Veterinary Service in Ensuring Epizootic and Veterinary-Sanitary Welfare of the Territory of the Republic of Buryatia for 2020","year":"2021"},{"key":"10.1016\/j.fsi.2026.111351_bib40","article-title":"Scythe: a Bayesian adapter trimmer","author":"Buffalo","year":"2016","journal-title":"GitHub Repository"},{"key":"10.1016\/j.fsi.2026.111351_bib41","series-title":"Sickle: a sliding-window, Adaptive, Quality-based Trimming Tool for Fastq Files","author":"Joshi","year":"2011"},{"key":"10.1016\/j.fsi.2026.111351_bib42","doi-asserted-by":"crossref","first-page":"1658","DOI":"10.1093\/bioinformatics\/btl158","article-title":"Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences","volume":"22","author":"Li","year":"2006","journal-title":"Bioinformatics"},{"key":"10.1016\/j.fsi.2026.111351_bib43","doi-asserted-by":"crossref","first-page":"R14","DOI":"10.1186\/gb-2010-11-2-r14","article-title":"Gene ontology analysis for RNA-seq: accounting for selection bias","volume":"11","author":"Young","year":"2010","journal-title":"Genome Biol."},{"key":"10.1016\/j.fsi.2026.111351_bib44","doi-asserted-by":"crossref","first-page":"587","DOI":"10.1093\/nar\/gkac963","article-title":"KEGG for taxonomy-based analysis of pathways and genomes","volume":"51","author":"Kanehisa","year":"2023","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.fsi.2026.111351_bib45","doi-asserted-by":"crossref","first-page":"666","DOI":"10.1016\/j.jaci.2016.07.007","article-title":"Regulation of the host immune system by helminth parasites","volume":"138","author":"Maizels","year":"2016","journal-title":"J. Allergy Clin. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib46","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/B978-0-12-802728-8.00001-1","article-title":"The concept of stress in fish","volume":"35","author":"Schreck","year":"2016","journal-title":"Fish Physiol."},{"key":"10.1016\/j.fsi.2026.111351_bib47","article-title":"Differential ubiquitination of host proteins in response to IPNV and ISAV viruses in Atlantic salmon","author":"Stewart","year":"2024","journal-title":"bioRxiv"},{"key":"10.1016\/j.fsi.2026.111351_bib48","first-page":"fuab044","article-title":"Lipid droplets and lipid mediators in viral infection and immunity","volume":"45","author":"Monson","year":"2021","journal-title":"FEMS Microbiol. Rev."},{"key":"10.1016\/j.fsi.2026.111351_bib49","doi-asserted-by":"crossref","first-page":"152","DOI":"10.1080\/23308249.2018.1520191","article-title":"The role of lectins in finfish: a review","volume":"27","author":"Elumalai","year":"2019","journal-title":"Rev. Fish. Sci. Aquacult."},{"key":"10.1016\/j.fsi.2026.111351_bib50","doi-asserted-by":"crossref","first-page":"137","DOI":"10.1016\/j.fsi.2004.09.006","article-title":"Innate immunity of fish (overview)","volume":"20","author":"Magnad\u00f3ttir","year":"2006","journal-title":"Fish Shellfish Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib51","article-title":"Identification of a TGF-\u03b21 homologue in the large yellow croaker (Larimichthys crocea) revealed its role in regulation of immune response","volume":"1","author":"Li","year":"2022","journal-title":"Water Biol. Secur."},{"key":"10.1016\/j.fsi.2026.111351_bib52","first-page":"1","article-title":"A review of PANoptosis mechanism: current knowledge on pyroptosis, apoptosis and necroptosis in fish","author":"Jin","year":"2025","journal-title":"Rev. Fish Biol. Fish."},{"key":"10.1016\/j.fsi.2026.111351_bib53","doi-asserted-by":"crossref","first-page":"236","DOI":"10.3390\/nu12010236","article-title":"A review of micronutrients and the immune system \u2013 working in harmony to reduce the risk of infection","volume":"12","author":"Gombart","year":"2020","journal-title":"Nutrients"},{"key":"10.1016\/j.fsi.2026.111351_bib54","doi-asserted-by":"crossref","DOI":"10.1038\/s41598-020-72394-9","article-title":"Alternative splicing of MR1 regulates antigen presentation to MAIT cells","volume":"10","author":"Narayanan","year":"2020","journal-title":"Sci. Rep."},{"key":"10.1016\/j.fsi.2026.111351_bib55","doi-asserted-by":"crossref","first-page":"1592","DOI":"10.3390\/cells14201592","article-title":"Evolutionary perspective of nonclassical MHC class I and innate-like T cells relevance in immune surveillance","volume":"14","author":"Robert","year":"2025","journal-title":"Cells"},{"key":"10.1016\/j.fsi.2026.111351_bib56","doi-asserted-by":"crossref","first-page":"1237","DOI":"10.1111\/jfd.13386","article-title":"Experimental study of ultrastructural mechanisms and kinetics of tegumental secretion in cestodes parasitizing fish (Cestoda: diphyllobothriidea)","volume":"44","author":"Kutyrev","year":"2021","journal-title":"J. Fish. Dis."},{"key":"10.1016\/j.fsi.2026.111351_bib57","doi-asserted-by":"crossref","first-page":"31","DOI":"10.1016\/j.fsi.2017.10.042","article-title":"Functional characterization of interferon regulatory factor 5 and its role in the innate antiviral immune response","volume":"72","author":"Ai","year":"2018","journal-title":"Fish Shellfish Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib58","doi-asserted-by":"crossref","first-page":"527","DOI":"10.1016\/j.ejcb.2008.03.008","article-title":"Hematopoietic cell kinase (Hck) isoforms and phagocyte duties \u2013 from signaling and actin reorganization to migration and phagocytosis","volume":"87","author":"Guiet","year":"2008","journal-title":"Eur. J. Cell Biol."},{"key":"10.1016\/j.fsi.2026.111351_bib59","doi-asserted-by":"crossref","first-page":"378","DOI":"10.3390\/cells8040378","article-title":"Major histocompatibility complex (MHC) genes and disease resistance in fish","volume":"8","author":"Yamaguchi","year":"2019","journal-title":"Cells"},{"key":"10.1016\/j.fsi.2026.111351_bib60","doi-asserted-by":"crossref","first-page":"16","DOI":"10.3109\/08830185.2010.529976","article-title":"Pathogen recognition by the innate immune system","volume":"30","author":"Kumar","year":"2011","journal-title":"Int. Rev. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib61","series-title":"Aquatic Lectins","first-page":"207","article-title":"Antimicrobial and immunomodulatory role of fish lectins","author":"Vibhute","year":"2022"},{"key":"10.1016\/j.fsi.2026.111351_bib62","doi-asserted-by":"crossref","first-page":"1703","DOI":"10.1038\/sj.onc.1204224","article-title":"Leukocyte-specific adaptor protein Grap2 interacts with hematopoietic progenitor kinase 1 (HPK1) to activate JNK signaling pathway in T lymphocytes","volume":"20","author":"Ma","year":"2001","journal-title":"Oncogene"},{"key":"10.1016\/j.fsi.2026.111351_bib63","doi-asserted-by":"crossref","DOI":"10.1080\/2162402X.2015.1026534","article-title":"HHLA2 and TMIGD2: new immunotherapeutic targets of the B7 and CD28 families","volume":"4","author":"Janakiram","year":"2015","journal-title":"OncoImmunology"},{"key":"10.1016\/j.fsi.2026.111351_bib64","doi-asserted-by":"crossref","first-page":"138","DOI":"10.1016\/j.fsi.2018.09.068","article-title":"Macropinocytosis-dependent endocytosis of Japanese flounder IgM+ B cells and its regulation by CD22","volume":"84","author":"Li","year":"2019","journal-title":"Fish Shellfish Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib65","series-title":"Principles of Fish Immunology","first-page":"487","article-title":"Antiparasitic immune responses","author":"Buchmann","year":"2022"},{"key":"10.1016\/j.fsi.2026.111351_bib66","doi-asserted-by":"crossref","first-page":"663","DOI":"10.1016\/S0301-472X(98)00072-1","article-title":"Flt3 ligand can promote survival and macrophage development without proliferation in myeloid progenitor cells","volume":"27","author":"Nicholls","year":"1999","journal-title":"Exp. Hematol."},{"key":"10.1016\/j.fsi.2026.111351_bib67","doi-asserted-by":"crossref","first-page":"550","DOI":"10.1016\/j.str.2013.01.014","article-title":"Structural insights into the mechanism of GTPase activation in the GIMAP family","volume":"21","author":"Schwefel","year":"2013","journal-title":"Structure"},{"key":"10.1016\/j.fsi.2026.111351_bib68","doi-asserted-by":"crossref","DOI":"10.3389\/fimmu.2021.679739","article-title":"The GIMAP family proteins: an incomplete puzzle","volume":"12","author":"Limoges","year":"2021","journal-title":"Front. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib69","doi-asserted-by":"crossref","first-page":"293","DOI":"10.3897\/zookeys.1256.153772","article-title":"Genome sequencing provides novel insights into diadromous migration adaptations in the roughskin sculpin, Trachidermus fasciatus (Scorpaeniformes, Cottidae)","volume":"1256","author":"Liu","year":"2025","journal-title":"ZooKeys"},{"key":"10.1016\/j.fsi.2026.111351_bib70","doi-asserted-by":"crossref","first-page":"437","DOI":"10.1038\/nrm.2017.27","article-title":"Alternative splicing as a regulator of development and tissue identity","volume":"18","author":"Baralle","year":"2017","journal-title":"Nat. Rev. Mol. Cell Biol."},{"key":"10.1016\/j.fsi.2026.111351_bib71","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1186\/s43556-021-00043-2","article-title":"E3 ubiquitin ligases: styles, structures and functions","volume":"2","author":"Yang","year":"2021","journal-title":"Mol. Biomed."},{"key":"10.1016\/j.fsi.2026.111351_bib72","doi-asserted-by":"crossref","DOI":"10.1111\/pim.12730","article-title":"A portrait of the immune response to proliferative kidney disease (PKD) in rainbow trout","volume":"42","author":"Bailey","year":"2020","journal-title":"Parasite Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib73","doi-asserted-by":"crossref","first-page":"2897","DOI":"10.3389\/fimmu.2019.02897","article-title":"Interleukin-7 receptor alpha in innate lymphoid cells: more than a marker","volume":"10","author":"Sheikh","year":"2019","journal-title":"Front. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib74","doi-asserted-by":"crossref","first-page":"149","DOI":"10.1016\/j.dci.2017.10.001","article-title":"Characterization of nuclear factor of activated T-cells-c3 (NFATc3) and gene expression of upstream-downstream signaling molecules in response to immunostimulants in Pacific red snapper cells","volume":"78","author":"Angulo","year":"2018","journal-title":"Dev. Comp. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib75","doi-asserted-by":"crossref","first-page":"435","DOI":"10.1046\/j.1365-2567.2000.00151.x","article-title":"Review article: role of the surrogate light chain and the pre-B-cell receptor in mouse B-cell development","volume":"101","author":"M\u00e5rtensson","year":"2000","journal-title":"Immunology"},{"key":"10.1016\/j.fsi.2026.111351_bib76","doi-asserted-by":"crossref","first-page":"1255","DOI":"10.4049\/jimmunol.171.3.1255","article-title":"A giant GTPase, very large inducible GTPase-1, is inducible by IFNs","volume":"171","author":"Klamp","year":"2003","journal-title":"J. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib77","doi-asserted-by":"crossref","first-page":"883","DOI":"10.1016\/j.tibs.2023.07.002","article-title":"Guanylate-binding proteins: mechanisms of pattern recognition and antimicrobial functions","volume":"48","author":"Kirkby","year":"2023","journal-title":"Trends Biochem. Sci."},{"key":"10.1016\/j.fsi.2026.111351_bib78","doi-asserted-by":"crossref","DOI":"10.1016\/j.dci.2023.104732","article-title":"Double-stranded RNA-dependent protein kinase (PKR) in antiviral defence in fish and mammals","volume":"145","author":"Chaumont","year":"2023","journal-title":"Dev. Comp. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib79","doi-asserted-by":"crossref","DOI":"10.3389\/fimmu.2020.559555","article-title":"Single-cell transcriptome profiling of immune cell repertoire of the Atlantic cod which naturally lacks the major histocompatibility class II system","volume":"11","author":"Guslund","year":"2020","journal-title":"Front. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib80","doi-asserted-by":"crossref","first-page":"373","DOI":"10.1152\/physrev.00027.2001","article-title":"The ubiquitin-proteasome proteolytic pathway: destruction for the sake of construction","volume":"82","author":"Glickman","year":"2002","journal-title":"Physiol. Rev."},{"key":"10.1016\/j.fsi.2026.111351_bib81","doi-asserted-by":"crossref","DOI":"10.1016\/j.fsi.2023.108718","article-title":"Molecular characterization and functional analysis of CD209E from Nile tilapia (Oreochromis niloticus) involved in immune response to bacterial infection","volume":"136","author":"Wu","year":"2023","journal-title":"Fish Shellfish Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib82","doi-asserted-by":"crossref","first-page":"2681","DOI":"10.1002\/jcp.26159","article-title":"Development of the LYVE-1 gene with an acidic-amino-acid-rich (AAAR) domain in evolution is associated with acquisition of lymph nodes and efficient adaptive immunity","volume":"233","author":"Huang","year":"2018","journal-title":"J. Cell. Physiol."},{"key":"10.1016\/j.fsi.2026.111351_bib83","doi-asserted-by":"crossref","DOI":"10.1128\/jvi.01792-22","article-title":"Cytokine receptor-like factor 3 negatively regulates antiviral immunity by promoting the degradation of TBK1 in teleost fish","volume":"97","author":"Yan","year":"2023","journal-title":"J. Virol."},{"key":"10.1016\/j.fsi.2026.111351_bib84","article-title":"Regulation of tripartite motif-containing proteins on immune response and viral evasion","volume":"12","author":"Zhang","year":"2021","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.fsi.2026.111351_bib85","doi-asserted-by":"crossref","first-page":"486","DOI":"10.1038\/nri3862","article-title":"Molecular and cellular insights into T cell exhaustion","volume":"15","author":"Wherry","year":"2015","journal-title":"Nat. Rev. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib86","doi-asserted-by":"crossref","first-page":"317","DOI":"10.1016\/0169-5347(96)10039-2","article-title":"Ecological immunology: costly parasite defences and trade-offs in evolutionary ecology","volume":"11","author":"Sheldon","year":"1996","journal-title":"Trends Ecol. Evol."},{"key":"10.1016\/j.fsi.2026.111351_bib87","doi-asserted-by":"crossref","first-page":"6791","DOI":"10.1111\/mec.16197","article-title":"Between-population differences in constitutive and infection-induced gene expression in threespine stickleback","volume":"30","author":"Fuess","year":"2021","journal-title":"Mol. Ecol."},{"key":"10.1016\/j.fsi.2026.111351_bib88","doi-asserted-by":"crossref","first-page":"1071","DOI":"10.3389\/fimmu.2017.01071","article-title":"Gene expression contributes to the recent evolution of host resistance in a model host-parasite system","volume":"8","author":"Lohman","year":"2017","journal-title":"Front. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib89","doi-asserted-by":"crossref","DOI":"10.1111\/pim.12731","article-title":"Salmon immunological defence and interplay with the modulatory capabilities of its ectoparasite Lepeophtheirus salmonis","volume":"42","author":"Braden","year":"2020","journal-title":"Parasite Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib90","doi-asserted-by":"crossref","first-page":"7995","DOI":"10.1038\/s41598-022-11773-w","article-title":"Small, charged proteins in salmon louse (Lepeophtheirus salmonis) secretions modulate Atlantic salmon (Salmo salar) immune responses and coagulation","volume":"12","author":"\u00d8verg\u00e5rd","year":"2022","journal-title":"Sci. Rep."},{"key":"10.1016\/j.fsi.2026.111351_bib91","first-page":"226","article-title":"Fish interferon-stimulated genes: the antiviral effectors","volume":"67","author":"Poynter","year":"2017","journal-title":"Dev. Comp. Immunol."},{"key":"10.1016\/j.fsi.2026.111351_bib92","doi-asserted-by":"crossref","DOI":"10.1038\/ncomms12077","article-title":"Neutrophils mediate Salmonella Typhimurium clearance through the GBP4 inflammasome-dependent production of prostaglandins","volume":"7","author":"Tyrkalska","year":"2016","journal-title":"Nat. Commun."},{"key":"10.1016\/j.fsi.2026.111351_bib93","doi-asserted-by":"crossref","first-page":"74","DOI":"10.1016\/j.fsi.2021.02.016","article-title":"Tilapia dsRNA-activated protein kinase R (PKR): an interferon-induced antiviral effector with translation inhibition activity","volume":"112","author":"Gan","year":"2021","journal-title":"Fish Shellfish Immunol."}],"container-title":["Fish & Shellfish Immunology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S105046482600255X?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S105046482600255X?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,7,4]],"date-time":"2026-07-04T01:29:21Z","timestamp":1783128561000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S105046482600255X"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,7]]},"references-count":93,"alternative-id":["S105046482600255X"],"URL":"https:\/\/doi.org\/10.1016\/j.fsi.2026.111351","relation":{},"ISSN":["1050-4648"],"issn-type":[{"value":"1050-4648","type":"print"}],"subject":[],"published":{"date-parts":[[2026,7]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Differential transcriptomic analysis of the head kidney in Coregonus migratorius naturally infected with Dibothriocephalus dendriticus","name":"articletitle","label":"Article Title"},{"value":"Fish & Shellfish Immunology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.fsi.2026.111351","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 Elsevier Ltd. All rights are reserved, including those for text and data mining, AI training, and similar technologies.","name":"copyright","label":"Copyright"}],"article-number":"111351"}}