{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,6]],"date-time":"2026-10-06T18:03:57Z","timestamp":1791309837177,"version":"4.3.1"},"reference-count":11,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2015,9,1]],"date-time":"2015-09-01T00:00:00Z","timestamp":1441065600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2015,7,13]],"date-time":"2015-07-13T00:00:00Z","timestamp":1436745600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0\/"}],"funder":[{"name":"French Ligue Nationale Contre le Cancer"},{"name":"Agence Nationale pour la Recherche","award":["SVSE2-YinE4F1Yang2"],"award-info":[{"award-number":["SVSE2-YinE4F1Yang2"]}]},{"name":"Agence Nationale pour la Recherche","award":["MetaboCycle 2"],"award-info":[{"award-number":["MetaboCycle 2"]}]},{"name":"Association pour la Recherche contre le Cancer"},{"DOI":"10.13039\/501100001665","name":"ANR","doi-asserted-by":"publisher","award":["JCJC-0014-01"],"award-info":[{"award-number":["JCJC-0014-01"]}],"id":[{"id":"10.13039\/501100001665","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001665","name":"ANR","doi-asserted-by":"publisher","award":["SVSE2-YinE4F1Yang2"],"award-info":[{"award-number":["SVSE2-YinE4F1Yang2"]}],"id":[{"id":"10.13039\/501100001665","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Genomics Data"],"published-print":{"date-parts":[[2015,9]]},"DOI":"10.1016\/j.gdata.2015.07.004","type":"journal-article","created":{"date-parts":[[2015,7,15]],"date-time":"2015-07-15T00:33:53Z","timestamp":1436920433000},"page":"368-370","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":12,"special_numbering":"C","title":["Description of an optimized ChIP-seq analysis pipeline dedicated to genome wide identification of E4F1 binding sites in primary and transformed MEFs"],"prefix":"10.1016","volume":"5","author":[{"given":"Thibault","family":"Houl\u00e8s","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Genevi\u00e8ve","family":"Rodier","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Laurent","family":"Le Cam","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Claude","family":"Sardet","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Olivier","family":"Kirsh","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.gdata.2015.07.004_bb0005","doi-asserted-by":"crossref","first-page":"6467","DOI":"10.1128\/MCB.24.14.6467-6475.2004","article-title":"The E4F protein is required for mitotic progression during embryonic cell cycles","volume":"24","author":"Le Cam","year":"2004","journal-title":"Mol. Cell. Biol."},{"key":"10.1016\/j.gdata.2015.07.004_bb0010","doi-asserted-by":"crossref","first-page":"775","DOI":"10.1016\/j.cell.2006.09.031","article-title":"E4F1 is an atypical ubiquitin ligase that modulates p53 effector functions independently of degradation","volume":"127","author":"Le Cam","year":"2006","journal-title":"Cell"},{"key":"10.1016\/j.gdata.2015.07.004_bb0015","doi-asserted-by":"crossref","first-page":"7738","DOI":"10.1073\/pnas.130198397","article-title":"pRB binds to and modulates the transrepressing activity of the E1A-regulated transcription factor p120E4F","volume":"97","author":"Fajas","year":"2000","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.gdata.2015.07.004_bb0020","doi-asserted-by":"crossref","first-page":"1403","DOI":"10.1084\/jem.20101995","article-title":"E4F1 deficiency results in oxidative stress-mediated cell death of leukemic cells","volume":"208","author":"Hatchi","year":"2011","journal-title":"J. Exp. Med."},{"key":"10.1016\/j.gdata.2015.07.004_bb0025","doi-asserted-by":"crossref","first-page":"1293","DOI":"10.1038\/nbt.1505","article-title":"An integrated software system for analyzing ChIP-chip and ChIP-seq data","volume":"26","author":"Ji","year":"2008","journal-title":"Nat. Biotechnol."},{"key":"10.1016\/j.gdata.2015.07.004_bb0030","doi-asserted-by":"crossref","first-page":"21076","DOI":"10.1073\/pnas.1010167107","article-title":"Transcription factor E4F1 is essential for epidermal stem cell maintenance and skin homeostasis","volume":"107","author":"Lacroix","year":"2010","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.gdata.2015.07.004_bb0035","doi-asserted-by":"crossref","first-page":"e70","DOI":"10.1093\/nar\/gks048","article-title":"Picking ChIP-seq peak detectors for analyzing chromatin modification experiments","volume":"40","author":"Micsinai","year":"2012","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.gdata.2015.07.004_bb0040","doi-asserted-by":"crossref","first-page":"4073","DOI":"10.1002\/j.1460-2075.1987.tb02753.x","article-title":"Identification of an E1A-inducible cellular factor that interacts with regulatory sequences within the adenovirus E4 promoter","volume":"6","author":"Raychaudhuri","year":"1987","journal-title":"EMBO J."},{"key":"10.1016\/j.gdata.2015.07.004_bb0045","author":"R Development Core Team"},{"key":"10.1016\/j.gdata.2015.07.004_bb0050","doi-asserted-by":"crossref","first-page":"220","DOI":"10.1016\/j.celrep.2015.03.024","article-title":"The transcription factor E4F1 coordinates CHK1-dependent checkpoint and mitochondrial functions","volume":"11","author":"Rodier","year":"2015","journal-title":"Cell Rep."},{"key":"10.1016\/j.gdata.2015.07.004_bb0055","doi-asserted-by":"crossref","first-page":"R137","DOI":"10.1186\/gb-2008-9-9-r137","article-title":"Model-based analysis of ChIP-Seq (MACS)","volume":"9","author":"Zhang","year":"2008","journal-title":"Genome Biol."}],"container-title":["Genomics Data"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2213596015001488?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2213596015001488?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2019,8,28]],"date-time":"2019-08-28T07:07:54Z","timestamp":1566976074000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S2213596015001488"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,9]]},"references-count":11,"alternative-id":["S2213596015001488"],"URL":"https:\/\/doi.org\/10.1016\/j.gdata.2015.07.004","relation":{},"ISSN":["2213-5960"],"issn-type":[{"value":"2213-5960","type":"print"}],"subject":[],"published":{"date-parts":[[2015,9]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Description of an optimized ChIP-seq analysis pipeline dedicated to genome wide identification of E4F1 binding sites in primary and transformed MEFs","name":"articletitle","label":"Article Title"},{"value":"Genomics Data","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.gdata.2015.07.004","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"Copyright \u00a9 2015 The Authors. Published by Elsevier Inc.","name":"copyright","label":"Copyright"}]}}