{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,20]],"date-time":"2026-05-20T08:04:09Z","timestamp":1779264249209,"version":"3.51.4"},"reference-count":62,"publisher":"Elsevier BV","issue":"1-2","license":[{"start":{"date-parts":[[2010,5,1]],"date-time":"2010-05-01T00:00:00Z","timestamp":1272672000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Gene"],"published-print":{"date-parts":[[2010,5]]},"DOI":"10.1016\/j.gene.2010.02.007","type":"journal-article","created":{"date-parts":[[2010,2,22]],"date-time":"2010-02-22T04:12:21Z","timestamp":1266811941000},"page":"24-35","source":"Crossref","is-referenced-by-count":23,"title":["Genetic diversity of the Plasmodium vivax merozoite surface protein-5 locus from diverse geographic origins"],"prefix":"10.1016","volume":"456","author":[{"given":"Chaturong","family":"Putaporntip","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rachanee","family":"Udomsangpetch","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Urassaya","family":"Pattanawong","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Liwang","family":"Cui","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Somchai","family":"Jongwutiwes","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/j.gene.2010.02.007_bib1","doi-asserted-by":"crossref","first-page":"593","DOI":"10.1016\/S0264-410X(02)00702-8","article-title":"Vaccinology: past achievements, present roadblocks and future promises","volume":"21","author":"Andre","year":"2003","journal-title":"Vaccine"},{"key":"10.1016\/j.gene.2010.02.007_bib2","doi-asserted-by":"crossref","first-page":"1229","DOI":"10.1093\/genetics\/164.3.1229","article-title":"Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites","volume":"164","author":"Anisimova","year":"2003","journal-title":"Genetics"},{"key":"10.1016\/j.gene.2010.02.007_bib3","unstructured":"Annual Statistics, Division of Vector-Borne Diseases, Ministry of Public Health, Thailand. Available at: http:\/\/www.thaivbd.org. Accessed 3 March 2009."},{"key":"10.1016\/j.gene.2010.02.007_bib4","doi-asserted-by":"crossref","first-page":"533","DOI":"10.1016\/j.pt.2007.08.011","article-title":"Neglect of Plasmodium vivax malaria","volume":"23","author":"Baird","year":"2007","journal-title":"Trends Parasitol."},{"key":"10.1016\/j.gene.2010.02.007_bib5","doi-asserted-by":"crossref","first-page":"573","DOI":"10.1093\/nar\/27.2.573","article-title":"Tandem repeats finder: a program to analyze DNA sequences","volume":"27","author":"Benson","year":"1999","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.gene.2010.02.007_bib6","doi-asserted-by":"crossref","first-page":"215","DOI":"10.1016\/S0166-6851(01)00458-3","article-title":"The Plasmodiumvivax homologues of merozoite surface proteins 4 and 5 from Plasmodium falciparum are expressed at different locations in the merozoite","volume":"120","author":"Black","year":"2002","journal-title":"Mol. Biochem. Parasitol."},{"key":"10.1016\/j.gene.2010.02.007_bib7","doi-asserted-by":"crossref","first-page":"153","DOI":"10.1016\/j.molbiopara.2004.07.006","article-title":"Merozoite surface proteins 4 and 5 of Plasmodium knowlesi have differing cellular localisation and association with lipid rafts","volume":"138","author":"Black","year":"2004","journal-title":"Mol. Biochem. Parasitol."},{"key":"10.1016\/j.gene.2010.02.007_bib8","doi-asserted-by":"crossref","first-page":"757","DOI":"10.1038\/nature07327","article-title":"Comparative genomics of the neglected human malaria parasite Plasmodium vivax","volume":"455","author":"Carlton","year":"2008","journal-title":"Nature"},{"key":"10.1016\/j.gene.2010.02.007_bib9","first-page":"225","article-title":"Status of malaria in Thailand","volume":"31","author":"Chareonviriyaphap","year":"2000","journal-title":"Southeast Asian J. Trop. Med. Pub. Health"},{"key":"10.1016\/j.gene.2010.02.007_bib10","doi-asserted-by":"crossref","first-page":"689","DOI":"10.1038\/76272","article-title":"A principal target of human immunity to malaria identified by molecular population genetic and immunological analyses","volume":"6","author":"Conway","year":"2000","journal-title":"Nat. Med."},{"key":"10.1016\/j.gene.2010.02.007_bib11","first-page":"755","article-title":"Status of malaria vaccine R&D in 2007","volume":"6","author":"Dooland","year":"2007","journal-title":"Expert. Rev. Vaccines"},{"key":"10.1016\/j.gene.2010.02.007_bib12","doi-asserted-by":"crossref","first-page":"765","DOI":"10.1093\/infdis\/173.3.765","article-title":"Clinical immunity to Plasmodium falciparum malaria is associated with serum antibodies to the 19-kDa C-terminal fragment of the merozoite surface antigen, PfMSP-1","volume":"173","author":"Egan","year":"1996","journal-title":"J. Infect. Dis."},{"key":"10.1016\/j.gene.2010.02.007_bib13","doi-asserted-by":"crossref","first-page":"11373","DOI":"10.1073\/pnas.91.24.11373","article-title":"Phylogeny of the malarial genus Plasmodium, derived from rRNA gene sequences","volume":"91","author":"Escalante","year":"1994","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.gene.2010.02.007_bib14","doi-asserted-by":"crossref","first-page":"8124","DOI":"10.1073\/pnas.95.14.8124","article-title":"The evolution of primate malaria parasites based on the gene encoding cytochrome b from the linear mitochondrial genome","volume":"95","author":"Escalante","year":"1998","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.gene.2010.02.007_bib15","doi-asserted-by":"crossref","first-page":"87","DOI":"10.1016\/0040-5809(72)90035-4","article-title":"The sampling theory of selectively neutral alleles","volume":"3","author":"Ewens","year":"1972","journal-title":"Theor. Popul. Biol."},{"key":"10.1016\/j.gene.2010.02.007_bib16","doi-asserted-by":"crossref","first-page":"479","DOI":"10.1093\/genetics\/131.2.479","article-title":"Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data","volume":"131","author":"Excoffier","year":"1992","journal-title":"Genetics"},{"key":"10.1016\/j.gene.2010.02.007_bib17","doi-asserted-by":"crossref","first-page":"1405","DOI":"10.1093\/genetics\/155.3.1405","article-title":"Hitchhiking under positive Darwinian selection","volume":"155","author":"Fay","year":"2000","journal-title":"Genetics"},{"key":"10.1016\/j.gene.2010.02.007_bib18","doi-asserted-by":"crossref","first-page":"915","DOI":"10.1093\/genetics\/147.2.915","article-title":"Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection","volume":"147","author":"Fu","year":"1997","journal-title":"Genetics"},{"key":"10.1016\/j.gene.2010.02.007_bib19","doi-asserted-by":"crossref","first-page":"693","DOI":"10.1093\/genetics\/133.3.693","article-title":"Statistical tests of neutrality of mutations","volume":"133","author":"Fu","year":"1993","journal-title":"Genetics"},{"issue":"Suppl 1","key":"10.1016\/j.gene.2010.02.007_bib20","doi-asserted-by":"crossref","first-page":"S9","DOI":"10.1186\/1475-2875-7-S1-S9","article-title":"Plasmodium vivax: who cares?","volume":"7","author":"Galinski","year":"2008","journal-title":"Malar. J."},{"key":"10.1016\/j.gene.2010.02.007_bib21","doi-asserted-by":"crossref","first-page":"685","DOI":"10.1093\/oxfordjournals.molbev.a025808","article-title":"BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data","volume":"14","author":"Gascuel","year":"1997","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib22","doi-asserted-by":"crossref","first-page":"241","DOI":"10.1016\/j.actatropica.2005.04.001","article-title":"Population structure of malaria parasites: the driving epidemiological forces","volume":"94","author":"Gauthier","year":"2005","journal-title":"Acta Trop."},{"key":"10.1016\/j.gene.2010.02.007_bib23","doi-asserted-by":"crossref","first-page":"661","DOI":"10.1017\/S0031182006001168","article-title":"High polymorphism in Plasmodium vivax merozoite surface protein-5 (MSP5)","volume":"133","author":"Gomez","year":"2006","journal-title":"Parasitology"},{"key":"10.1016\/j.gene.2010.02.007_bib24","doi-asserted-by":"crossref","first-page":"123","DOI":"10.1186\/1471-2148-8-123","article-title":"Polymorphism at the apical membrane antigen 1 locus reflects the world population history of Plasmodium vivax","volume":"8","author":"Grynberg","year":"2008","journal-title":"BMC Evol. Biol."},{"key":"10.1016\/j.gene.2010.02.007_bib62","first-page":"696","article-title":"A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood","volume":"52","author":"Guindon","year":"2003","journal-title":"Biol."},{"key":"10.1016\/j.gene.2010.02.007_bib25","doi-asserted-by":"crossref","first-page":"790","DOI":"10.1101\/gr.3541005","article-title":"Multilocus patterns of nucleotide variability and the demographic and selection history of Drosophila melanogaster populations","volume":"15","author":"Haddrill","year":"2005","journal-title":"Genome Res."},{"key":"10.1016\/j.gene.2010.02.007_bib26","doi-asserted-by":"crossref","first-page":"160","DOI":"10.1007\/BF02101694","article-title":"Dating of the human\u2013ape splitting by a molecular clock of mitochondrial DNA","volume":"22","author":"Hasegawa","year":"1985","journal-title":"J. Mol. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib27","doi-asserted-by":"crossref","first-page":"327","DOI":"10.1016\/S1473-3099(04)01043-6","article-title":"The global distribution and population at risk of malaria: past, present, and future","volume":"4","author":"Hay","year":"2004","journal-title":"Lancet Infect. Dis."},{"key":"10.1016\/j.gene.2010.02.007_bib28","doi-asserted-by":"crossref","first-page":"226","DOI":"10.1007\/BF01245622","article-title":"Linkage disequilibrium in finite populations","volume":"38","author":"Hill","year":"1968","journal-title":"Theor. Appl. Genet."},{"key":"10.1016\/j.gene.2010.02.007_bib29","doi-asserted-by":"crossref","first-page":"147","DOI":"10.1093\/genetics\/111.1.147","article-title":"Statistical properties of the number of recombination events in the history of a sample of DNA sequences","volume":"111","author":"Hudson","year":"1985","journal-title":"Genetics"},{"key":"10.1016\/j.gene.2010.02.007_bib30","doi-asserted-by":"crossref","first-page":"1733","DOI":"10.1093\/molbev\/msi168","article-title":"Mitochondrial genome sequences support ancient population expansion in Plasmodium vivax","volume":"22","author":"Jongwutiwes","year":"2005","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib31","doi-asserted-by":"crossref","first-page":"1585","DOI":"10.1093\/oxfordjournals.molbev.a004220","article-title":"The extent of nucleotide polymorphism is highly variable across a 3-kb region on Plasmodium falciparum chromosome 2","volume":"19","author":"Jongwutiwes","year":"2002","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib32","doi-asserted-by":"crossref","first-page":"2211","DOI":"10.3201\/eid1012.040293","article-title":"Naturally acquired Plasmodium knowlesi malaria in human","volume":"10","author":"Jongwutiwes","year":"2004","journal-title":"Thailand. Emerg. Infect. Dis."},{"key":"10.1016\/j.gene.2010.02.007_bib33","doi-asserted-by":"crossref","first-page":"2632","DOI":"10.1093\/bioinformatics\/btp482","article-title":"T-REKS: identification of Tandem REpeats in sequences with a K-mean S based algorithm","volume":"25","author":"Jorda","year":"2009","journal-title":"Bioinformatics"},{"key":"10.1016\/j.gene.2010.02.007_bib34","doi-asserted-by":"crossref","first-page":"6606","DOI":"10.1128\/IAI.70.12.6606-6613.2002","article-title":"Immunization with a combination of merozoite surface proteins 4\/5 and 1 enhances protection against lethal challenge with Plasmodium yoelii","volume":"70","author":"Kedzierski","year":"2002","journal-title":"Infect. Immun."},{"key":"10.1016\/j.gene.2010.02.007_bib35","doi-asserted-by":"crossref","first-page":"2295","DOI":"10.1002\/eji.200425811","article-title":"An integrative approach to CTL epitope prediction: a combined algorithm integrating MHC class I binding, TAP transport efficiency, and proteasomal cleavage predictions","volume":"35","author":"Larsen","year":"2005","journal-title":"Eur. J. Immunol."},{"key":"10.1016\/j.gene.2010.02.007_bib36","first-page":"203","article-title":"Slipped-strand mispairing: a major mechanism for DNA sequence evolution","volume":"4","author":"Levinson","year":"1987","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib37","doi-asserted-by":"crossref","first-page":"49","DOI":"10.1093\/genetics\/49.1.49","article-title":"The interaction of selection and linkage. I. General considerations: heterotic models","volume":"49","author":"Lewontin","year":"1964","journal-title":"Genetics"},{"key":"10.1016\/j.gene.2010.02.007_bib38","doi-asserted-by":"crossref","first-page":"652","DOI":"10.1038\/351652a0","article-title":"Adaptive protein evolution at the Adh locus in Drosophila","volume":"351","author":"McDonald","year":"1991","journal-title":"Nature"},{"key":"10.1016\/j.gene.2010.02.007_bib39","doi-asserted-by":"crossref","first-page":"1231","DOI":"10.1093\/genetics\/160.3.1231","article-title":"A coalescent-based method for detecting and estimating recombination rates from gene sequences","volume":"160","author":"McVean","year":"2002","journal-title":"Genetics"},{"key":"10.1016\/j.gene.2010.02.007_bib40","series-title":"Molecular Evolutionary Genetics","author":"Nei","year":"1987"},{"key":"10.1016\/j.gene.2010.02.007_bib41","doi-asserted-by":"crossref","first-page":"718","DOI":"10.1016\/j.vaccine.2004.05.031","article-title":"Human antibodies to recombinant protein constructs of Plasmodium falciparum apical membrane antigen 1 (AMA1) and their associations with protection from malaria","volume":"23","author":"Polley","year":"2004","journal-title":"Vaccine"},{"key":"10.1016\/j.gene.2010.02.007_bib42","doi-asserted-by":"crossref","first-page":"79","DOI":"10.4269\/ajtmh.2007.77.79","article-title":"Vivax malaria: neglected and not benign","volume":"77","author":"Price","year":"2007","journal-title":"Am. J. Trop. Med. Hyg."},{"key":"10.1016\/j.gene.2010.02.007_bib43","doi-asserted-by":"crossref","first-page":"821","DOI":"10.1016\/j.meegid.2009.04.017","article-title":"Limited global diversity of the Plasmodium vivax merozoite surface protein 4 gene","volume":"9","author":"Putaporntip","year":"2009","journal-title":"Infect. Genet. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib44","doi-asserted-by":"crossref","first-page":"1295","DOI":"10.1016\/j.meegid.2009.07.005","article-title":"Nucleotide sequence polymorphism at the apical membrane antigen-1 locus reveals population history of Plasmodium vivax in Thailand","volume":"9","author":"Putaporntip","year":"2009","journal-title":"Infect. Genet. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib45","doi-asserted-by":"crossref","first-page":"16348","DOI":"10.1073\/pnas.252348999","article-title":"Mosaic organization and heterogeneity in frequency of allelic recombination of the Plasmodium vivax merozoite surface protein-1 locus","volume":"99","author":"Putaporntip","year":"2002","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.gene.2010.02.007_bib46","doi-asserted-by":"crossref","first-page":"97","DOI":"10.1016\/S0378-1119(01)00425-5","article-title":"Diversity in the thrombospondin-related adhesive protein gene (TRAP) of Plasmodium vivax","volume":"268","author":"Putaporntip","year":"2001","journal-title":"Gene"},{"key":"10.1016\/j.gene.2010.02.007_bib47","doi-asserted-by":"crossref","first-page":"3030","DOI":"10.1016\/S0264-410X(03)00116-6","article-title":"The protective efficacy of MSP4\/5 against lethal Plasmodium chabaudi adami challenge is dependent on the type of DNA vaccine vector and vaccination protocol","volume":"21","author":"Rainczuk","year":"2003","journal-title":"Vaccine"},{"key":"10.1016\/j.gene.2010.02.007_bib48","doi-asserted-by":"crossref","first-page":"2496","DOI":"10.1093\/bioinformatics\/btg359","article-title":"DnaSP, DNA polymorphism analyses by the coalescent and other methods","volume":"19","author":"Rozas","year":"2003","journal-title":"Bioinformatics"},{"key":"10.1016\/j.gene.2010.02.007_bib49","doi-asserted-by":"crossref","first-page":"50","DOI":"10.1006\/expr.2000.4591","article-title":"Long PCR amplification of Plasmodium falciparum DNA extracted from filter paper blots","volume":"97","author":"Sakihama","year":"2001","journal-title":"Exp. Parasitol."},{"key":"10.1016\/j.gene.2010.02.007_bib50","doi-asserted-by":"crossref","first-page":"437","DOI":"10.1093\/genetics\/105.2.437","article-title":"Evolutionary relationship of DNA sequences in finite populations","volume":"105","author":"Tajima","year":"1983","journal-title":"Genetics"},{"key":"10.1016\/j.gene.2010.02.007_bib51","doi-asserted-by":"crossref","first-page":"1596","DOI":"10.1093\/molbev\/msm092","article-title":"MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0","volume":"24","author":"Tamura","year":"2007","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib52","doi-asserted-by":"crossref","first-page":"4876","DOI":"10.1093\/nar\/25.24.4876","article-title":"The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools","volume":"25","author":"Thompson","year":"1997","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.gene.2010.02.007_bib53","doi-asserted-by":"crossref","first-page":"6172","DOI":"10.1128\/IAI.72.10.6172-6175.2004","article-title":"Oral immunization with a combination of Plasmodium yoelii merozoite surface proteins 1 and 4\/5 enhances protection against lethal malaria challenge","volume":"72","author":"Wang","year":"2004","journal-title":"Infect. Immun."},{"key":"10.1016\/j.gene.2010.02.007_bib54","doi-asserted-by":"crossref","first-page":"1292","DOI":"10.1093\/oxfordjournals.molbev.a026219","article-title":"Distributions of statistics used for the comparison of models of sequence evolution in phylogenetics","volume":"16","author":"Whelan","year":"1999","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib55","doi-asserted-by":"crossref","first-page":"1358","DOI":"10.2307\/2408641","article-title":"Estimating F statistics for the analysis of population structure","volume":"38","author":"Weir","year":"1984","journal-title":"Evolution"},{"key":"10.1016\/j.gene.2010.02.007_bib56","doi-asserted-by":"crossref","first-page":"134","DOI":"10.1086\/588711","article-title":"Antibodies to Plasmodium falciparum and Plasmodium vivax merozoite surface protein 5 in Indonesia: species-specific and cross-reactive responses","volume":"198","author":"Woodberry","year":"2008","journal-title":"J. Infect. Dis."},{"key":"10.1016\/j.gene.2010.02.007_bib57","first-page":"555","article-title":"PAML: a program package for phylogenetic analysis by maximum likelihood","volume":"13","author":"Yang","year":"1997","journal-title":"Comp. Appl. BioSci."},{"key":"10.1016\/j.gene.2010.02.007_bib58","doi-asserted-by":"crossref","first-page":"1107","DOI":"10.1093\/molbev\/msi097","article-title":"Bayes empirical Bayes inference of amino acid sites under positive selection","volume":"22","author":"Yang","year":"2005","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib59","doi-asserted-by":"crossref","first-page":"1586","DOI":"10.1093\/molbev\/msm088","article-title":"PAML 4: phylogenetic analysis by maximum likelihood","volume":"24","author":"Yang","year":"2007","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib60","doi-asserted-by":"crossref","first-page":"273","DOI":"10.1093\/molbev\/msn231","article-title":"An investigation of the statistical power of neutrality tests based on comparative and population genetic data","volume":"26","author":"Zhai","year":"2008","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.gene.2010.02.007_bib61","doi-asserted-by":"crossref","first-page":"256","DOI":"10.4269\/ajtmh.2005.72.256","article-title":"Spatio- temporal distribution of Plasmodium falciparum and P. vivax malaria in Thailand","volume":"72","author":"Zhou","year":"2005","journal-title":"Am. J. Trop. Med. Hyg."}],"container-title":["Gene"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S037811191000065X?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S037811191000065X?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2021,10,23]],"date-time":"2021-10-23T13:22:01Z","timestamp":1634995321000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S037811191000065X"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2010,5]]},"references-count":62,"journal-issue":{"issue":"1-2","published-print":{"date-parts":[[2010,5]]}},"alternative-id":["S037811191000065X"],"URL":"https:\/\/doi.org\/10.1016\/j.gene.2010.02.007","relation":{},"ISSN":["0378-1119"],"issn-type":[{"value":"0378-1119","type":"print"}],"subject":[],"published":{"date-parts":[[2010,5]]}}}