{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,19]],"date-time":"2026-09-19T13:09:38Z","timestamp":1789823378271,"version":"4.0.1"},"reference-count":80,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2024,11,1]],"date-time":"2024-11-01T00:00:00Z","timestamp":1730419200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2024,11,1]],"date-time":"2024-11-01T00:00:00Z","timestamp":1730419200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2024,11,1]],"date-time":"2024-11-01T00:00:00Z","timestamp":1730419200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2024,11,1]],"date-time":"2024-11-01T00:00:00Z","timestamp":1730419200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2024,11,1]],"date-time":"2024-11-01T00:00:00Z","timestamp":1730419200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2024,11,1]],"date-time":"2024-11-01T00:00:00Z","timestamp":1730419200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2024,11,1]],"date-time":"2024-11-01T00:00:00Z","timestamp":1730419200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"funder":[{"DOI":"10.13039\/501100003121","name":"Ferdowsi University of Mashhad","doi-asserted-by":"publisher","award":["3\/29332"],"award-info":[{"award-number":["3\/29332"]}],"id":[{"id":"10.13039\/501100003121","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004836","name":"Danmarks Frie Forskningsfond","doi-asserted-by":"publisher","award":["11106571"],"award-info":[{"award-number":["11106571"]}],"id":[{"id":"10.13039\/501100004836","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["International Journal of Biological Macromolecules"],"published-print":{"date-parts":[[2024,11]]},"DOI":"10.1016\/j.ijbiomac.2024.136402","type":"journal-article","created":{"date-parts":[[2024,10,9]],"date-time":"2024-10-09T13:10:16Z","timestamp":1728479416000},"page":"136402","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":3,"special_numbering":"P2","title":["L-asparaginase-driven antibiosis in Pseudomonas fluorescens EK007: A promising biocontrol strategy against fire blight"],"prefix":"10.1016","volume":"281","author":[{"given":"Roghayeh","family":"Habibi","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5540-2694","authenticated-orcid":false,"given":"Idin","family":"Zibaee","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5555-8453","authenticated-orcid":false,"given":"Reza","family":"Talebi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Javad","family":"Behravan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Saeed","family":"Tarighi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1327-2051","authenticated-orcid":false,"given":"Asker","family":"Brejnrod","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Annelise Helene","family":"Kj\u00f8ller","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6227-9906","authenticated-orcid":false,"given":"S\u00f8ren Johannes","family":"S\u00f8rensen","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4830-1796","authenticated-orcid":false,"given":"Jonas Stenl\u00f8kke","family":"Madsen","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"issue":"19","key":"10.1016\/j.ijbiomac.2024.136402_bb0005","doi-asserted-by":"crossref","first-page":"5351","DOI":"10.1128\/JB.182.19.5351-5358.2000","article-title":"Molecular analysis of sucrose metabolism of Erwinia amylovora and influence on bacterial virulence","volume":"182","author":"Bogs","year":"2000","journal-title":"J. Bacteriol."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0010","doi-asserted-by":"crossref","first-page":"43","DOI":"10.1094\/MPMI.2004.17.1.43","article-title":"The phytoalexin-inducible multidrug efflux pump AcrAB contributes to virulence in the fire blight pathogen","volume":"17","author":"Burse","year":"2004","journal-title":"Erwinia amylovora, Mol. Plant-Microbe Interact."},{"issue":"23","key":"10.1016\/j.ijbiomac.2024.136402_bb0015","doi-asserted-by":"crossref","first-page":"8088","DOI":"10.1128\/JB.187.23.8088-8103.2005","article-title":"Identification of Erwinia amylovora genes induced during infection of immature pear tissue","volume":"187","author":"Zhao","year":"2005","journal-title":"J. Bacteriol."},{"issue":"6","key":"10.1016\/j.ijbiomac.2024.136402_bb0020","doi-asserted-by":"crossref","first-page":"650","DOI":"10.1094\/PDIS.2003.87.6.650","article-title":"Changes in the sensitivity of Erwinia amylovora populations to streptomycin and oxolinic acid in Israel","volume":"87","author":"Manulis","year":"2003","journal-title":"Plant Dis."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0025","doi-asserted-by":"crossref","first-page":"443","DOI":"10.1146\/annurev.phyto.40.120301.093927","article-title":"Antibiotic use in plant agriculture","volume":"40","author":"McManus","year":"2002","journal-title":"Annu. Rev. Phytopathol."},{"issue":"5","key":"10.1016\/j.ijbiomac.2024.136402_bb0030","doi-asserted-by":"crossref","first-page":"714","DOI":"10.1094\/PDIS-92-5-0714","article-title":"Isolation of streptomycin-resistant isolates of Erwinia amylovora in New York","volume":"92","author":"Russo","year":"2008","journal-title":"Plant Dis."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0035","doi-asserted-by":"crossref","first-page":"60","DOI":"10.1080\/07060660109506910","article-title":"Survey of Erwinia amylovora isolates from British Columbia for resistance to bactericides and virulence on apple","volume":"23","author":"Sholberg","year":"2001","journal-title":"Can. J. Plant Pathol."},{"issue":"3","key":"10.1016\/j.ijbiomac.2024.136402_bb0040","doi-asserted-by":"crossref","first-page":"402","DOI":"10.1094\/PDIS-07-12-0638-RE","article-title":"Evaluation of strategies for fire blight control in organic pome fruit without antibiotics","volume":"97","author":"Johnson","year":"2013","journal-title":"Plant Dis."},{"issue":"12","key":"10.1016\/j.ijbiomac.2024.136402_bb0045","doi-asserted-by":"crossref","first-page":"1330","DOI":"10.1094\/PHYTO-03-10-0097","article-title":"Control of fire blight by Pseudomonas fluorescens A506 and Pantoea vagans C9-1 applied as single strains and mixed inocula","volume":"100","author":"Stockwell","year":"2010","journal-title":"Phytopathology"},{"issue":"6","key":"10.1016\/j.ijbiomac.2024.136402_bb0050","doi-asserted-by":"crossref","first-page":"12836","DOI":"10.3390\/ijms160612836","article-title":"Virulence factors of Erwinia amylovora: a review","volume":"16","author":"Piqu\u00e9","year":"2015","journal-title":"Int. J. Mol. Sci."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0055","doi-asserted-by":"crossref","first-page":"117","DOI":"10.1094\/Phyto-83-117","article-title":"Interactions between the biological control agent Pseudomonas fluorescens A506 and Erwinia amylovora in pear blossoms","volume":"83","author":"Wilson","year":"1993","journal-title":"Phytopathology"},{"issue":"6","key":"10.1016\/j.ijbiomac.2024.136402_bb0060","doi-asserted-by":"crossref","first-page":"746","DOI":"10.1094\/Phyto-78-746","article-title":"Multiple antibiotic production by Erwinia herbicola","volume":"78","author":"Ishimaru","year":"1988","journal-title":"Phytopathology"},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0065","first-page":"325","article-title":"Evaluation of control of fire blight infection of apple blossoms and shoots with SAR inducers, biological agents, a growth regulator, copper compounds, and other materials","volume":"590","author":"Aldwinckle","year":"2001","journal-title":"IX International Workshop on Fire Blight"},{"issue":"2","key":"10.1016\/j.ijbiomac.2024.136402_bb0070","doi-asserted-by":"crossref","first-page":"93","DOI":"10.1007\/s10658-004-1423-x","article-title":"Detection of the fire blight biocontrol agent Bacillus subtilis BD170 (Biopro\u00ae) in a Swiss apple orchard","volume":"111","author":"Broggini","year":"2005","journal-title":"Eur. J. Plant Pathol."},{"issue":"9","key":"10.1016\/j.ijbiomac.2024.136402_bb0075","doi-asserted-by":"crossref","first-page":"914","DOI":"10.1094\/Phyto-82-914","article-title":"Interactions between Erwinia herbicola and E. amylovora on the stigma of hawthorn blossoms","volume":"82","author":"Wilson","year":"1992","journal-title":"Phytopathology"},{"issue":"9","key":"10.1016\/j.ijbiomac.2024.136402_bb0080","first-page":"1377","article-title":"Increased potato yields by treatment of seedpieces with specific strains of Pseudomonas fluorescens and Pseudomonas putida [Bacterization]","volume":"68","author":"Burr","year":"1978","journal-title":"Phytopathology"},{"issue":"12","key":"10.1016\/j.ijbiomac.2024.136402_bb0085","doi-asserted-by":"crossref","first-page":"1286","DOI":"10.1094\/PHYTO.2004.94.12.1286","article-title":"Bioavailability of iron to Pseudomonas fluorescens strain A506 on flowers of pear and apple","volume":"94","author":"Temple","year":"2004","journal-title":"Phytopathology"},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0090","unstructured":"J. Cabrefiga Olamendi, A. Bonaterra i Carreras, E. Montesinos Segu\u00ed, Mechanisms of antagonism of Pseudomonas fluorescens EPS62e against Erwinia amylovora, the causal agent of fire blight, International Microbiology, 2007, vol. 10, n\u00fam. 2, p. 123\u2013132 (2007)."},{"issue":"11","key":"10.1016\/j.ijbiomac.2024.136402_bb0095","doi-asserted-by":"crossref","first-page":"1096","DOI":"10.1094\/PHYTO.1997.87.11.1096","article-title":"Crab apple blossoms as a model for research on biological control of fire blight","volume":"87","author":"Pusey","year":"1997","journal-title":"Phytopathology"},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0100","first-page":"231","article-title":"P10c: a new biological control agent for control of fire blight which can be sprayed or distributed using honey bees","volume":"590","author":"Vanneste","year":"2001","journal-title":"IX International Workshop on Fire Blight"},{"issue":"6","key":"10.1016\/j.ijbiomac.2024.136402_bb0105","doi-asserted-by":"crossref","first-page":"1037","DOI":"10.1111\/j.1574-6976.2010.00221.x","article-title":"Natural functions of lipopeptides from Bacillus and Pseudomonas: more than surfactants and antibiotics","volume":"34","author":"Raaijmakers","year":"2010","journal-title":"FEMS Microbiol. Rev."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0110","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0024651","article-title":"Boolean models of biosurfactants production in Pseudomonas fluorescens","volume":"7","author":"Richard","year":"2012","journal-title":"PLoS One"},{"issue":"6","key":"10.1016\/j.ijbiomac.2024.136402_bb0115","doi-asserted-by":"crossref","first-page":"475","DOI":"10.1007\/s00203-006-0163-z","article-title":"The lipopeptides mycosubtilin and surfactin enhance spreading of Bacillus subtilis strains by their surface-active properties","volume":"186","author":"Lecl\u00e8re","year":"2006","journal-title":"Arch. Microbiol."},{"issue":"11","key":"10.1016\/j.ijbiomac.2024.136402_bb0120","doi-asserted-by":"crossref","first-page":"893","DOI":"10.1007\/s00203-012-0823-0","article-title":"Cyclic lipopeptide profile of the plant-beneficial endophytic bacterium Bacillus subtilis HC8","volume":"194","author":"Malfanova","year":"2012","journal-title":"Arch. Microbiol."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0125","doi-asserted-by":"crossref","first-page":"307","DOI":"10.1104\/pp.103.028712","article-title":"Biocontrol of Bacillus subtilis against infection of Arabidopsis roots by Pseudomonas syringae is facilitated by biofilm formation and surfactin production","volume":"134","author":"Bais","year":"2004","journal-title":"Plant Physiol."},{"issue":"13","key":"10.1016\/j.ijbiomac.2024.136402_bb0130","doi-asserted-by":"crossref","first-page":"4636","DOI":"10.1128\/AEM.00548-09","article-title":"High-level biosynthesis of the anteiso-C17 isoform of the antibiotic mycosubtilin in Bacillus subtilis and characterization of its candidacidal activity","volume":"75","author":"Fickers","year":"2009","journal-title":"Appl. Environ. Microbiol."},{"issue":"3","key":"10.1016\/j.ijbiomac.2024.136402_bb0135","first-page":"39","article-title":"Induction of resistance in wheat against powdery mildew by bacterial cyclic lipopeptides","volume":"77","author":"Khong","year":"2011","journal-title":"Commun. Agric. Appl. Biol. Sci."},{"issue":"3","key":"10.1016\/j.ijbiomac.2024.136402_bb0140","doi-asserted-by":"crossref","first-page":"115","DOI":"10.1016\/j.tim.2007.12.009","article-title":"Bacillus lipopeptides: versatile weapons for plant disease biocontrol","volume":"16","author":"Ongena","year":"2008","journal-title":"Trends Microbiol."},{"issue":"4","key":"10.1016\/j.ijbiomac.2024.136402_bb0145","doi-asserted-by":"crossref","first-page":"1084","DOI":"10.1111\/j.1462-2920.2006.01202.x","article-title":"Surfactin and fengycin lipopeptides of Bacillus subtilis as elicitors of induced systemic resistance in plants","volume":"9","author":"Ongena","year":"2007","journal-title":"Environ. Microbiol."},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0150","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1146\/annurev-phyto-081211-172908","article-title":"Diversity and natural functions of antibiotics produced by beneficial and plant pathogenic bacteria","volume":"50","author":"Raaijmakers","year":"2012","journal-title":"Annu. Rev. Phytopathol."},{"issue":"5","key":"10.1016\/j.ijbiomac.2024.136402_bb0155","doi-asserted-by":"crossref","first-page":"1151","DOI":"10.1111\/j.1365-2672.2004.02252.x","article-title":"Role of lipopeptides produced by Bacillus subtilis GA1 in the reduction of grey mould disease caused by Botrytis cinerea on apple","volume":"96","author":"Toure","year":"2004","journal-title":"J. Appl. Microbiol."},{"issue":"4","key":"10.1016\/j.ijbiomac.2024.136402_bb0160","doi-asserted-by":"crossref","first-page":"731","DOI":"10.1111\/j.1469-8137.2007.02138.x","article-title":"Role of the cyclic lipopeptide massetolide a in biological control of Phytophthora infestans and in colonization of tomato plants by Pseudomonas fluorescens","volume":"175","author":"Tran","year":"2007","journal-title":"New Phytol."},{"issue":"15","key":"10.1016\/j.ijbiomac.2024.136402_bb0165","doi-asserted-by":"crossref","first-page":"4950","DOI":"10.1128\/AEM.00241-09","article-title":"Cellular responses of the late blight pathogen Phytophthora infestans to cyclic lipopeptide surfactants and their dependence on G proteins","volume":"75","author":"van de Mortel","year":"2009","journal-title":"Appl. Environ. Microbiol."},{"issue":"7","key":"10.1016\/j.ijbiomac.2024.136402_bb0170","doi-asserted-by":"crossref","first-page":"699","DOI":"10.1094\/MPMI-19-0699","article-title":"Cyclic lipopeptide production by plant-associated Pseudomonas spp.: diversity, activity, biosynthesis, and regulation","volume":"19","author":"Raaijmakers","year":"2006","journal-title":"Mol. Plant-Microbe Interact."},{"issue":"14","key":"10.1016\/j.ijbiomac.2024.136402_bb0175","doi-asserted-by":"crossref","first-page":"4826","DOI":"10.1128\/AEM.00335-12","article-title":"Genetic and functional characterization of cyclic lipopeptide white-line-inducing principle (WLIP) production by rice rhizosphere isolate Pseudomonas putida RW10S2","volume":"78","author":"Rokni-Zadeh","year":"2012","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0180","series-title":"Identification Schemes, Laboratory Guide of Identification of Plant Pathogenic bacteria","first-page":"1","author":"Schaad","year":"1988"},{"issue":"3","key":"10.1016\/j.ijbiomac.2024.136402_bb0185","doi-asserted-by":"crossref","first-page":"472","DOI":"10.1016\/S0723-2020(99)80057-5","article-title":"Isolation and characterization of epiphytic bacteria from the phyllosphere of apple, antagonistic in vitro to Venturia inaequalis, the causal agent of apple scab","volume":"22","author":"Kucheryava","year":"1999","journal-title":"Syst. Appl. Microbiol."},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0190","doi-asserted-by":"crossref","unstructured":"M. Gorris, M. Cambra, P. Llop, M. L\u00f3pez, P. Lecomte, R. Chartier, J.-P. Paulin, A sensitive and specific detection of Erwinia amylovora based on the ELISA-DASI enrichment method with monoclonal antibodies, VII International Workshop on Fire Blight 411, 1995, pp. 41\u201346.","DOI":"10.17660\/ActaHortic.1996.411.10"},{"issue":"24","key":"10.1016\/j.ijbiomac.2024.136402_bb0195","doi-asserted-by":"crossref","first-page":"7710","DOI":"10.1128\/AEM.01244-09","article-title":"2-amino-3-(oxirane-2, 3-dicarboxamido)-propanoyl-valine, an effective peptide antibiotic from the epiphyte Pantoea agglomerans 48b\/90","volume":"75","author":"Sammer","year":"2009","journal-title":"Appl. Environ. Microbiol."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0200","doi-asserted-by":"crossref","first-page":"284","DOI":"10.1128\/AEM.67.1.284-292.2001","article-title":"Pantoea agglomerans strain EH318 produces two antibiotics that inhibit Erwinia amylovora in vitro","volume":"67","author":"Wright","year":"2001","journal-title":"Appl. Environ. Microbiol."},{"issue":"4","key":"10.1016\/j.ijbiomac.2024.136402_bb0205","doi-asserted-by":"crossref","first-page":"949","DOI":"10.1111\/j.1365-2672.2011.05098.x","article-title":"Selective inhibition of Erwinia amylovora by the herbicidally active germination-arrest factor (GAF) produced by Pseudomonas bacteria","volume":"111","author":"Halgren","year":"2011","journal-title":"J. Appl. Microbiol."},{"issue":"2","key":"10.1016\/j.ijbiomac.2024.136402_bb0210","first-page":"123","article-title":"Mechanisms of antagonism of Pseudomonas fluorescens EPS62e against Erwinia amylovora, the causal agent of fire blight","volume":"10","author":"Cabrefiga","year":"2007","journal-title":"Int. Microbiol."},{"issue":"3","key":"10.1016\/j.ijbiomac.2024.136402_bb0215","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0059370","article-title":"Cell-free culture supernatant of Bifidobacterium breve CNCM I-4035 decreases pro-inflammatory cytokines in human dendritic cells challenged with Salmonella typhi through TLR activation","volume":"8","author":"Bermudez-Brito","year":"2013","journal-title":"PLoS One"},{"issue":"7","key":"10.1016\/j.ijbiomac.2024.136402_bb0220","doi-asserted-by":"crossref","first-page":"2148","DOI":"10.1099\/mic.0.028001-0","article-title":"Pseudomonas aeruginosa extracellular products inhibit staphylococcal growth, and disrupt established biofilms produced by Staphylococcus epidermidis","volume":"155","author":"Qin","year":"2009","journal-title":"Microbiology"},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0225","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1756-0500-7-606","article-title":"Potential of cell-free supernatants from cultures of selected lactic acid bacteria and yeast obtained from local fermented foods as inhibitors of Listeria monocytogenes, Salmonella spp. and Staphylococcus aureus","volume":"7","author":"Mariam","year":"2014","journal-title":"BMC. Res. Notes"},{"issue":"11","key":"10.1016\/j.ijbiomac.2024.136402_bb0230","doi-asserted-by":"crossref","first-page":"6568","DOI":"10.1128\/jb.172.11.6568-6572.1990","article-title":"Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria","volume":"172","author":"De Lorenzo","year":"1990","journal-title":"J. Bacteriol."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0235","doi-asserted-by":"crossref","first-page":"66","DOI":"10.1128\/jb.167.1.66-72.1986","article-title":"Second symbiotic megaplasmid in Rhizobium meliloti carrying exopolysaccharide and thiamine synthesis genes","volume":"167","author":"Finan","year":"1986","journal-title":"J. Bacteriol."},{"issue":"2","key":"10.1016\/j.ijbiomac.2024.136402_bb0240","doi-asserted-by":"crossref","first-page":"321","DOI":"10.1101\/gr.3257305","article-title":"Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen","volume":"15","author":"Lewenza","year":"2005","journal-title":"Genome Res."},{"issue":"2","key":"10.1016\/j.ijbiomac.2024.136402_bb0245","doi-asserted-by":"crossref","first-page":"425","DOI":"10.1111\/j.1462-2920.2006.01154.x","article-title":"Thioquinolobactin, a Pseudomonas siderophore with antifungal and anti-Pythium activity","volume":"9","author":"Matthijs","year":"2007","journal-title":"Environ. Microbiol."},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0250","doi-asserted-by":"crossref","first-page":"6503","DOI":"10.1007\/s00253-015-6529-x","article-title":"Genome-wide investigation of the genes involved in nicotine metabolism in Pseudomonas putida J5 by Tn 5 transposon mutagenesis","volume":"99","author":"Xia","year":"2015","journal-title":"Appl. Microbiol. Biotechnol."},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0255","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1471-2164-9-75","article-title":"The RAST server: rapid annotations using subsystems technology","volume":"9","author":"Aziz","year":"2008","journal-title":"BMC Genomics"},{"issue":"11","key":"10.1016\/j.ijbiomac.2024.136402_bb0260","doi-asserted-by":"crossref","first-page":"1820","DOI":"10.1038\/nprot.2015.115","article-title":"Precision-engineering the Pseudomonas aeruginosa genome with two-step allelic exchange","volume":"10","author":"Hmelo","year":"2015","journal-title":"Nat. Protoc."},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0265","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1471-2180-5-30","article-title":"An improved method for rapid generation of unmarked Pseudomonas aeruginosa deletion mutants","volume":"5","author":"Choi","year":"2005","journal-title":"BMC Microbiol."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0270","doi-asserted-by":"crossref","first-page":"97","DOI":"10.1046\/j.1365-2958.2003.03751.x","article-title":"Characterization of two Pseudomonas putida lipopeptide biosurfactants, putisolvin I and II, which inhibit biofilm formation and break down existing biofilms","volume":"51","author":"Kuiper","year":"2004","journal-title":"Mol. Microbiol."},{"issue":"2","key":"10.1016\/j.ijbiomac.2024.136402_bb0275","doi-asserted-by":"crossref","first-page":"665","DOI":"10.1016\/j.bbrc.2011.11.124","article-title":"GacA directly regulates expression of several virulence genes in Pseudomonas syringae pv. tabaci 11528","volume":"417","author":"Cha","year":"2012","journal-title":"Biochem. Biophys. Res. Commun."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0280","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1756-0500-7-606","article-title":"Potential of cell-free supernatants from cultures of selected lactic acid bacteria and yeast obtained from local fermented foods as inhibitors of Listeria monocytogenes, Salmonella spp. and Staphylococcus aureus","volume":"7","author":"Mariam","year":"2014","journal-title":"BMC. Res. Notes"},{"issue":"9","key":"10.1016\/j.ijbiomac.2024.136402_bb0285","doi-asserted-by":"crossref","first-page":"829","DOI":"10.1099\/jmm.0.05259-0","article-title":"Bacteriocin-like inhibitory substance (BLIS) production by the normal flora of the nasopharynx: potential to protect against otitis media?","volume":"52","author":"Walls","year":"2003","journal-title":"J. Med. Microbiol."},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0290","doi-asserted-by":"crossref","unstructured":"R. Habibi, S. Tarighi, J. Behravan, P. Taheri, A.H. Kj\u00f8ller, A. Brejnrod, J.S. Madsen, S.J. S\u00f8rensen, Whole-Genome sequence of Pseudomonas fluorescens EK007-RG4, a promising biocontrol agent against a broad range of bacteria, including the fire blight bacterium Erwinia amylovora, Genome announcements 5(13) (2017) https:\/\/doi.org\/10.1128\/genomea. 00026-17.","DOI":"10.1128\/genomeA.00026-17"},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0295","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1471-2164-9-75","article-title":"The RAST server: rapid annotations using subsystems technology","volume":"9","author":"Aziz","year":"2008","journal-title":"BMC Genomics"},{"issue":"12","key":"10.1016\/j.ijbiomac.2024.136402_bb0300","doi-asserted-by":"crossref","first-page":"7161","DOI":"10.1128\/AEM.69.12.7161-7172.2003","article-title":"Biochemical, genetic, and zoosporicidal properties of cyclic lipopeptide surfactants produced by Pseudomonas fluorescens","volume":"69","author":"de Souza","year":"2003","journal-title":"Appl. Environ. Microbiol."},{"issue":"8","key":"10.1016\/j.ijbiomac.2024.136402_bb0305","doi-asserted-by":"crossref","first-page":"2777","DOI":"10.1128\/JB.01563-07","article-title":"Massetolide A biosynthesis in Pseudomonas fluorescens","volume":"190","author":"De Bruijn","year":"2008","journal-title":"J. Bacteriol."},{"issue":"6","key":"10.1016\/j.ijbiomac.2024.136402_bb0310","doi-asserted-by":"crossref","first-page":"1910","DOI":"10.1128\/JB.01558-08","article-title":"Regulation of cyclic lipopeptide biosynthesis in Pseudomonas fluorescens by the ClpP protease","volume":"191","author":"De Bruijn","year":"2009","journal-title":"J. Bacteriol."},{"issue":"W1","key":"10.1016\/j.ijbiomac.2024.136402_bb0315","doi-asserted-by":"crossref","first-page":"W237","DOI":"10.1093\/nar\/gkv437","article-title":"Wohlleben, antiSMASH 3.0\u2014a comprehensive resource for the genome mining of biosynthetic gene clusters","volume":"43","author":"Weber","year":"2015","journal-title":"Nucleic Acids Res."},{"issue":"D1","key":"10.1016\/j.ijbiomac.2024.136402_bb0320","doi-asserted-by":"crossref","first-page":"D1113","DOI":"10.1093\/nar\/gkv1143","article-title":"Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing","volume":"44","author":"Flissi","year":"2015","journal-title":"Nucleic Acids Res."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0325","doi-asserted-by":"crossref","first-page":"116","DOI":"10.1016\/j.gene.2012.04.074","article-title":"The mechanism of sugar-mediated catabolite repression of the propionate catabolic genes in Escherichia coli","volume":"504","author":"Park","year":"2012","journal-title":"Gene"},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0330","doi-asserted-by":"crossref","first-page":"315","DOI":"10.1016\/j.biortech.2013.01.132","article-title":"Microbial lipid production from xylose by Mortierella isabellina","volume":"133","author":"Gao","year":"2013","journal-title":"Bioresour. Technol."},{"issue":"1","key":"10.1016\/j.ijbiomac.2024.136402_bb0335","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1754-6834-6-134","article-title":"Engineering xylose metabolism in triacylglycerol-producing Rhodococcus opacus for lignocellulosic fuel production","volume":"6","author":"Kurosawa","year":"2013","journal-title":"Biotechnol. Biofuels"},{"issue":"16","key":"10.1016\/j.ijbiomac.2024.136402_bb0340","doi-asserted-by":"crossref","first-page":"5483","DOI":"10.1128\/AEM.08022-11","article-title":"Engineering of a xylose metabolic pathway in Rhodococcus strains","volume":"78","author":"Xiong","year":"2012","journal-title":"Appl. Environ. Microbiol."},{"issue":"4","key":"10.1016\/j.ijbiomac.2024.136402_bb0345","doi-asserted-by":"crossref","first-page":"899","DOI":"10.1111\/j.1462-2920.2009.02134.x","article-title":"Inactivation of the GacA response regulator in Pseudomonas fluorescens Pf-5 has far-reaching transcriptomic consequences","volume":"12","author":"Hassan","year":"2010","journal-title":"Environ. Microbiol."},{"issue":"2","key":"10.1016\/j.ijbiomac.2024.136402_bb0350","doi-asserted-by":"crossref","first-page":"241","DOI":"10.1111\/j.1365-2958.2007.06042.x","article-title":"Gac\/Rsm signal transduction pathway of \u03b3-proteobacteria: from RNA recognition to regulation of social behaviour","volume":"67","author":"Lapouge","year":"2008","journal-title":"Mol. Microbiol."},{"issue":"9","key":"10.1016\/j.ijbiomac.2024.136402_bb0355","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0137553","article-title":"Regulation of GacA in Pseudomonas chlororaphis strains shows a niche specificity","volume":"10","author":"Li","year":"2015","journal-title":"PLoS One"},{"issue":"8","key":"10.1016\/j.ijbiomac.2024.136402_bb0360","doi-asserted-by":"crossref","first-page":"2005","DOI":"10.1099\/mic.0.26154-0","article-title":"rhlA is required for the production of a novel biosurfactant promoting swarming motility in Pseudomonas aeruginosa: 3-(3-hydroxyalkanoyloxy) alkanoic acids (HAAs), the precursors of rhamnolipids","volume":"149","author":"Deziel","year":"2003","journal-title":"Microbiology"},{"issue":"7","key":"10.1016\/j.ijbiomac.2024.136402_bb0365","doi-asserted-by":"crossref","first-page":"388","DOI":"10.1016\/j.micres.2012.01.003","article-title":"Isolation and characterization of Pseudomonas brassicacearum J12 as an antagonist against Ralstonia solanacearum and identification of its antimicrobial components","volume":"167","author":"Zhou","year":"2012","journal-title":"Microbiol. Res."},{"issue":"2","key":"10.1016\/j.ijbiomac.2024.136402_bb0370","doi-asserted-by":"crossref","first-page":"167","DOI":"10.1111\/j.1365-2672.1985.tb01444.x","article-title":"Regulation of syringomycin synthesis in Pseudomonas syringae pv. syringae and defined conditions for its production","volume":"58","author":"Gross","year":"1985","journal-title":"J. Appl. Bacteriol."},{"key":"10.1016\/j.ijbiomac.2024.136402_bb0375","doi-asserted-by":"crossref","first-page":"149","DOI":"10.1094\/Phyto-86-149","article-title":"Iron availability affects induction of systemic resistance to Fusarium wilt of radish by Pseudomonas fluorescens","volume":"86","author":"Leeman","year":"1996","journal-title":"Phytopathology"},{"issue":"6","key":"10.1016\/j.ijbiomac.2024.136402_bb0380","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0039139","article-title":"The effect of iron limitation on the transcriptome and proteome of Pseudomonas fluorescens Pf-5","volume":"7","author":"Lim","year":"2012","journal-title":"PLoS One"},{"issue":"2","key":"10.1016\/j.ijbiomac.2024.136402_bb0385","doi-asserted-by":"crossref","first-page":"169","DOI":"10.1111\/j.1574-6968.2006.00406.x","article-title":"Influence of environmental conditions on putisolvins I and II production in Pseudomonas putida strain PCL1445","volume":"263","author":"Dubern","year":"2006","journal-title":"FEMS Microbiol. Lett."},{"issue":"9","key":"10.1016\/j.ijbiomac.2024.136402_bb0390","doi-asserted-by":"crossref","first-page":"3261","DOI":"10.1128\/aem.61.9.3261-3267.1995","article-title":"Development of a microbial community of bacterial and yeast antagonists to control wound-invading postharvest pathogens of fruits","volume":"61","author":"Janisiewicz","year":"1995","journal-title":"Appl. Environ. Microbiol."},{"issue":"2","key":"10.1016\/j.ijbiomac.2024.136402_bb0395","doi-asserted-by":"crossref","first-page":"487","DOI":"10.1128\/AEM.66.2.487-492.2000","article-title":"Quinolobactin, a new siderophore of Pseudomonas fluorescens ATCC 17400, the production of which is repressed by the cognate pyoverdine","volume":"66","author":"Mossialos","year":"2000","journal-title":"Appl. Environ. Microbiol."},{"issue":"2","key":"10.1016\/j.ijbiomac.2024.136402_bb0400","doi-asserted-by":"crossref","first-page":"244","DOI":"10.1094\/PHYTO-97-2-0244","article-title":"Using Pseudomonas spp. for integrated biological control","volume":"97","author":"Stockwell","year":"2007","journal-title":"Phytopathology"}],"container-title":["International Journal of Biological Macromolecules"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0141813024072118?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0141813024072118?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,7,1]],"date-time":"2026-07-01T01:39:28Z","timestamp":1782869968000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0141813024072118"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,11]]},"references-count":80,"alternative-id":["S0141813024072118"],"URL":"https:\/\/doi.org\/10.1016\/j.ijbiomac.2024.136402","relation":{},"ISSN":["0141-8130"],"issn-type":[{"value":"0141-8130","type":"print"}],"subject":[],"published":{"date-parts":[[2024,11]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"L-asparaginase-driven antibiosis in Pseudomonas fluorescens EK007: A promising biocontrol strategy against fire blight","name":"articletitle","label":"Article Title"},{"value":"International Journal of Biological Macromolecules","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.ijbiomac.2024.136402","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2024 Elsevier B.V. All rights are reserved, including those for text and data mining, AI training, and similar technologies.","name":"copyright","label":"Copyright"}],"article-number":"136402"}}