{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,22]],"date-time":"2025-10-22T23:19:12Z","timestamp":1761175152313,"version":"build-2065373602"},"reference-count":32,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2021,7,1]],"date-time":"2021-07-01T00:00:00Z","timestamp":1625097600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2021,7,1]],"date-time":"2021-07-01T00:00:00Z","timestamp":1625097600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2021,5,13]],"date-time":"2021-05-13T00:00:00Z","timestamp":1620864000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0\/"}],"content-domain":{"domain":["clinicalkey.com","clinicalkey.com.au","clinicalkey.es","clinicalkey.fr","clinicalkey.jp","ijidonline.com","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["International Journal of Infectious Diseases"],"published-print":{"date-parts":[[2021,7]]},"DOI":"10.1016\/j.ijid.2021.05.028","type":"journal-article","created":{"date-parts":[[2021,5,15]],"date-time":"2021-05-15T11:27:44Z","timestamp":1621078064000},"page":"129-136","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":9,"special_numbering":"C","title":["Rapid discrimination between tuberculosis and sarcoidosis using next-generation sequencing"],"prefix":"10.1016","volume":"108","author":[{"given":"Yencheng","family":"Chao","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jieyi","family":"Li","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ziying","family":"Gong","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Chun","family":"Li","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Maosong","family":"Ye","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Qunying","family":"Hong","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiaokai","family":"Zhao","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yonghua","family":"Sun","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zhonghai","family":"Chen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shaojie","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jie","family":"Hu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yong","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Huijun","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiaobo","family":"Xu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xinyu","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dilbar","family":"Anwar","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yingyong","family":"Hou","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Daoyun","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xin","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/j.ijid.2021.05.028_bib0005","doi-asserted-by":"crossref","first-page":"4065","DOI":"10.1007\/s11033-020-05413-7","article-title":"Advances in diagnosis of tuberculosis: an update into molecular diagnosis of Mycobacterium tuberculosis","volume":"47","author":"Acharya","year":"2020","journal-title":"Mol Biol Rep"},{"key":"10.1016\/j.ijid.2021.05.028_bib0010","doi-asserted-by":"crossref","first-page":"21","DOI":"10.1016\/j.tube.2016.01.003","article-title":"Tuberculosis or sarcoidosis: opposite ends of the same disease spectrum?","volume":"98","author":"Agrawal","year":"2016","journal-title":"Tuberculosis (Edinb)"},{"key":"10.1016\/j.ijid.2021.05.028_bib0015","doi-asserted-by":"crossref","first-page":"131","DOI":"10.1016\/j.meegid.2018.08.030","article-title":"Improving diagnosis and case management of patients with tuberculosis: a review of gaps, needs and potential solutions in accessing laboratory diagnostics","volume":"72","author":"Andama","year":"2019","journal-title":"Infect Genet Evol"},{"key":"10.1016\/j.ijid.2021.05.028_bib0020","doi-asserted-by":"crossref","first-page":"2230","DOI":"10.1128\/JCM.00486-15","article-title":"Rapid whole-genome sequencing of Mycobacterium tuberculosis isolates directly from clinical samples","volume":"53","author":"Brown","year":"2015","journal-title":"J Clin Microbiol"},{"key":"10.1016\/j.ijid.2021.05.028_bib0025","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pmed.1002824","article-title":"Treatment of latent infection to achieve tuberculosis elimination in low-incidence countries","volume":"16","author":"Campbell","year":"2019","journal-title":"PLoS Med"},{"key":"10.1016\/j.ijid.2021.05.028_bib0030","doi-asserted-by":"crossref","first-page":"51","DOI":"10.1186\/s13073-015-0164-0","article-title":"Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences","volume":"7","author":"Coll","year":"2015","journal-title":"Genome Med"},{"key":"10.1016\/j.ijid.2021.05.028_bib0035","doi-asserted-by":"crossref","first-page":"2058","DOI":"10.1128\/JCM.00535-16","article-title":"Rapid drug susceptibility testing of drug-resistant Mycobacterium tuberculosis isolates directly from clinical samples by use of amplicon sequencing: a proof-of-concept study","volume":"54","author":"Colman","year":"2016","journal-title":"J Clin Microbiol"},{"key":"10.1016\/j.ijid.2021.05.028_bib0040","doi-asserted-by":"crossref","first-page":"l5553","DOI":"10.1136\/bmj.l5553","article-title":"New advances in the management of pulmonary sarcoidosis","volume":"367","author":"Culver","year":"2019","journal-title":"BMJ"},{"key":"10.1016\/j.ijid.2021.05.028_bib0045","doi-asserted-by":"crossref","DOI":"10.1128\/JCM.00009-18","article-title":"Next-generation sequencing for characterizing drug resistance-conferring Mycobacterium tuberculosis genes from clinical isolates in the Ukraine","volume":"56","author":"Daum","year":"2018","journal-title":"J Clin Microbiol"},{"key":"10.1016\/j.ijid.2021.05.028_bib0050","doi-asserted-by":"crossref","first-page":"1642","DOI":"10.1016\/S0140-6736(19)30308-3","article-title":"Tuberculosis","volume":"393","author":"Furin","year":"2019","journal-title":"Lancet"},{"key":"10.1016\/j.ijid.2021.05.028_bib0055","first-page":"1","article-title":"Genetic diversity in Mycobacterium tuberculosis","volume":"374","author":"Gagneux","year":"2013","journal-title":"Curr Top Microbiol Immunol"},{"key":"10.1016\/j.ijid.2021.05.028_bib0060","doi-asserted-by":"crossref","first-page":"2847","DOI":"10.1093\/bioinformatics\/btw313","article-title":"Complex heatmaps reveal patterns and correlations in multidimensional genomic data","volume":"32","author":"Gu","year":"2016","journal-title":"Bioinformatics"},{"key":"10.1016\/j.ijid.2021.05.028_bib0065","doi-asserted-by":"crossref","first-page":"508","DOI":"10.1183\/09031936.00002607","article-title":"Molecular evidence for the role of mycobacteria in sarcoidosis: a meta-analysis","volume":"30","author":"Gupta","year":"2007","journal-title":"Eur Respir J"},{"key":"10.1016\/j.ijid.2021.05.028_bib0070","doi-asserted-by":"crossref","first-page":"506","DOI":"10.1097\/MCP.0b013e3283560809","article-title":"Sarcoidosis and tuberculosis: the same disease with different manifestations or similar manifestations of different disorders","volume":"18","author":"Gupta","year":"2012","journal-title":"Curr Opin Pulm Med"},{"key":"10.1016\/j.ijid.2021.05.028_bib0075","doi-asserted-by":"crossref","first-page":"473","DOI":"10.1038\/nrg.2017.44","article-title":"Reference standards for next-generation sequencing","volume":"18","author":"Hardwick","year":"2017","journal-title":"Nat Rev Genet"},{"key":"10.1016\/j.ijid.2021.05.028_bib0080","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pmed.1002152","article-title":"The global burden of latent tuberculosis infection: a re-estimation using mathematical modelling","volume":"13","author":"Houben","year":"2016","journal-title":"PLoS Med"},{"key":"10.1016\/j.ijid.2021.05.028_bib0085","article-title":"Mycobacterium tuberculosis next-generation whole genome sequencing: opportunities and challenges","volume":"2018","author":"Iketleng","year":"2018","journal-title":"Tuberc Res Treat"},{"key":"10.1016\/j.ijid.2021.05.028_bib0090","doi-asserted-by":"crossref","first-page":"166","DOI":"10.1097\/QCO.0000000000000629","article-title":"Advances in the diagnosis and treatment of latent tuberculosis infection","volume":"33","author":"Jung","year":"2020","journal-title":"Curr Opin Infect Dis"},{"key":"10.1016\/j.ijid.2021.05.028_bib0095","doi-asserted-by":"crossref","first-page":"111","DOI":"10.1093\/cid\/ciw778","article-title":"Official American Thoracic Society\/Infectious Diseases Society of America\/Centers for Disease Control and Prevention Clinical Practice Guidelines: diagnosis of tuberculosis in adults and children","volume":"64","author":"Lewinsohn","year":"2017","journal-title":"Clin Infect Dis"},{"key":"10.1016\/j.ijid.2021.05.028_bib0100","doi-asserted-by":"crossref","first-page":"L519","DOI":"10.1152\/ajplung.00172.2018","article-title":"Simultaneous amplification and testing method for Mycobacterium tuberculosis rRNA to differentiate sputum-negative tuberculosis from sarcoidosis","volume":"316","author":"Li","year":"2019","journal-title":"Am J Physiol Lung Cell Mol Physiol"},{"key":"10.1016\/j.ijid.2021.05.028_bib0105","doi-asserted-by":"crossref","first-page":"7853","DOI":"10.1073\/pnas.1121072109","article-title":"Common patterns and disease-related signatures in tuberculosis and sarcoidosis","volume":"109","author":"Maertzdorf","year":"2012","journal-title":"Proc Natl Acad Sci U S A"},{"key":"10.1016\/j.ijid.2021.05.028_bib0110","doi-asserted-by":"crossref","DOI":"10.1136\/bcr-2014-206016","article-title":"Coexistence of pulmonary tuberculosis and sarcoidosis: a diagnostic dilemma","volume":"2014","author":"Mandal","year":"2014","journal-title":"BMJ Case Rep"},{"key":"10.1016\/j.ijid.2021.05.028_bib0115","doi-asserted-by":"crossref","first-page":"130","DOI":"10.1016\/j.ijid.2016.11.422","article-title":"Removing the bottleneck in whole genome sequencing of Mycobacterium tuberculosis for rapid drug resistance analysis: a call to action","volume":"56","author":"McNerney","year":"2017","journal-title":"Int J Infect Dis"},{"key":"10.1016\/j.ijid.2021.05.028_bib0120","doi-asserted-by":"crossref","first-page":"533","DOI":"10.1038\/s41579-019-0214-5","article-title":"Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues","volume":"17","author":"Meehan","year":"2019","journal-title":"Nat Rev Microbiol"},{"key":"10.1016\/j.ijid.2021.05.028_bib0125","doi-asserted-by":"crossref","first-page":"340","DOI":"10.7326\/0003-4819-146-5-200703060-00006","article-title":"Meta-analysis: new tests for the diagnosis of latent tuberculosis infection: areas of uncertainty and recommendations for research","volume":"146","author":"Menzies","year":"2007","journal-title":"Ann Intern Med"},{"key":"10.1016\/j.ijid.2021.05.028_bib0130","doi-asserted-by":"crossref","first-page":"103","DOI":"10.1513\/pats.200511-119JH","article-title":"Advances in the diagnosis and treatment of tuberculosis","volume":"3","author":"Nahid","year":"2006","journal-title":"Proc Am Thorac Soc"},{"year":"2020","series-title":"Global tuberculosis report","author":"World Health Organization","key":"10.1016\/j.ijid.2021.05.028_bib0135"},{"key":"10.1016\/j.ijid.2021.05.028_bib0140","doi-asserted-by":"crossref","first-page":"967","DOI":"10.1016\/S0140-6736(19)32045-8","article-title":"Challenges and controversies in childhood tuberculosis","volume":"394","author":"Reuter","year":"2019","journal-title":"Lancet"},{"key":"10.1016\/j.ijid.2021.05.028_bib0145","first-page":"1482","article-title":"End the tuberculosis emergency: a promise is not enough","volume":"394","author":"The Lancet","year":"2019","journal-title":"Lancet"},{"key":"10.1016\/j.ijid.2021.05.028_bib0150","doi-asserted-by":"crossref","first-page":"3578","DOI":"10.1128\/JCM.37.11.3578-3582.1999","article-title":"Use of BACTEC MGIT 960 for recovery of mycobacteria from clinical specimens: multicenter study","volume":"37","author":"Tortoli","year":"1999","journal-title":"J Clin Microbiol"},{"key":"10.1016\/j.ijid.2021.05.028_bib0155","doi-asserted-by":"crossref","first-page":"1155","DOI":"10.1016\/S0140-6736(13)60680-7","article-title":"Sarcoidosis","volume":"383","author":"Valeyre","year":"2014","journal-title":"Lancet"},{"key":"10.1016\/j.ijid.2021.05.028_bib0160","doi-asserted-by":"crossref","first-page":"467","DOI":"10.1111\/resp.13482","article-title":"Bidirectional association between tuberculosis and sarcoidosis","volume":"24","author":"Wang","year":"2019","journal-title":"Respirology"}],"container-title":["International Journal of Infectious Diseases"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1201971221004306?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1201971221004306?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,10,22]],"date-time":"2025-10-22T07:57:59Z","timestamp":1761119879000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1201971221004306"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021,7]]},"references-count":32,"alternative-id":["S1201971221004306"],"URL":"https:\/\/doi.org\/10.1016\/j.ijid.2021.05.028","relation":{},"ISSN":["1201-9712"],"issn-type":[{"type":"print","value":"1201-9712"}],"subject":[],"published":{"date-parts":[[2021,7]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Rapid discrimination between tuberculosis and sarcoidosis using next-generation sequencing","name":"articletitle","label":"Article Title"},{"value":"International Journal of Infectious Diseases","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.ijid.2021.05.028","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2021 The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases.","name":"copyright","label":"Copyright"}]}}