{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,5]],"date-time":"2026-03-05T07:41:38Z","timestamp":1772696498259,"version":"3.50.1"},"reference-count":31,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,3,27]],"date-time":"2025-03-27T00:00:00Z","timestamp":1743033600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100012151","name":"Sanming Project of Medicine in Shenzen Municipality","doi-asserted-by":"publisher","award":["SZSM202103008"],"award-info":[{"award-number":["SZSM202103008"]}],"id":[{"id":"10.13039\/501100012151","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100012151","name":"Sanming Project of Medicine in Shenzen Municipality","doi-asserted-by":"publisher","award":["JCYJ20200109142438111"],"award-info":[{"award-number":["JCYJ20200109142438111"]}],"id":[{"id":"10.13039\/501100012151","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100012166","name":"National Key Research and Development Program of China","doi-asserted-by":"publisher","award":["2021YFC2300102"],"award-info":[{"award-number":["2021YFC2300102"]}],"id":[{"id":"10.13039\/501100012166","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100012166","name":"National Key Research and Development Program of China","doi-asserted-by":"publisher","award":["2021YFC2300100"],"award-info":[{"award-number":["2021YFC2300100"]}],"id":[{"id":"10.13039\/501100012166","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100010877","name":"Science, Technology and Innovation Commission of Shenzhen Municipality","doi-asserted-by":"publisher","award":["KQTD20200820145822023"],"award-info":[{"award-number":["KQTD20200820145822023"]}],"id":[{"id":"10.13039\/501100010877","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100010877","name":"Science, Technology and Innovation Commission of Shenzhen Municipality","doi-asserted-by":"publisher","award":["KCXFZ20211020172545006"],"award-info":[{"award-number":["KCXFZ20211020172545006"]}],"id":[{"id":"10.13039\/501100010877","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["clinicalkey.com","clinicalkey.com.au","clinicalkey.es","clinicalkey.fr","clinicalkey.jp","ijidonline.com","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["International Journal of Infectious Diseases"],"published-print":{"date-parts":[[2025,6]]},"DOI":"10.1016\/j.ijid.2025.107896","type":"journal-article","created":{"date-parts":[[2025,3,31]],"date-time":"2025-03-31T16:40:51Z","timestamp":1743439251000},"page":"107896","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":2,"special_numbering":"C","title":["Year-round infectome profiling of acute febrile respiratory illness unveiled complex epidemiological dynamics postlifting of COVID-19 restrictions"],"prefix":"10.1016","volume":"155","author":[{"given":"Shisong","family":"Fang","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Lin","family":"Zhu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shaohui","family":"Bai","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Weijian","family":"Tian","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yuanfei","family":"Pan","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shumiao","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rongjun","family":"Bi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Minqi","family":"Liang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gengyan","family":"Luo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiaojing","family":"Chen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Minwu","family":"Peng","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hanlin","family":"Liu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Lu","family":"Xie","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Runzi","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wudi","family":"Zhou","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shengze","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ting","family":"Xie","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Haolu","family":"Zha","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Chuming","family":"Luo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xin","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ying","family":"Sun","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hui","family":"Liu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Min","family":"Jiang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Weihua","family":"Wu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xuan","family":"Zou","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yaoqing","family":"Chen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jianhui","family":"Yuan","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ying","family":"Jiang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nan","family":"Wu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mang","family":"Shi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yuelong","family":"Shu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Huanle","family":"Luo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"issue":"10377","key":"10.1016\/j.ijid.2025.107896_bib0001","doi-asserted-by":"crossref","first-page":"643","DOI":"10.1016\/S0140-6736(23)00213-1","article-title":"China's COVID-19 reopening measures-warriors and weapons","volume":"401","author":"Huang","year":"2023","journal-title":"The Lancet"},{"issue":"1","key":"10.1016\/j.ijid.2025.107896_bib0002","doi-asserted-by":"crossref","first-page":"5270","DOI":"10.1038\/s41467-023-40940-4","article-title":"Effects of public-health measures for zeroing out different SARS-CoV-2 variants","volume":"14","author":"Ge","year":"2023","journal-title":"Nat Commun"},{"issue":"3","key":"10.1016\/j.ijid.2025.107896_bib0003","doi-asserted-by":"crossref","first-page":"579","DOI":"10.1038\/s41591-023-02212-y","article-title":"Estimating the transmission dynamics of SARS-CoV-2 Omicron BF.7 in Beijing after adjustment of the zero-COVID policy in November\u2013December 2022","volume":"29","author":"Leung","year":"2023","journal-title":"Nat Med"},{"issue":"12","key":"10.1016\/j.ijid.2025.107896_bib0004","doi-asserted-by":"crossref","DOI":"10.1016\/j.heliyon.2024.e32304","article-title":"Alterations of pathogen transmission patterns and attenuated immune stimulation might be the cause of increased adult respiratory infections cases in 2023, results from a multi-center study in mainland China","volume":"10","author":"Ai","year":"2024","journal-title":"Heliyon"},{"issue":"4","key":"10.1016\/j.ijid.2025.107896_bib0005","doi-asserted-by":"crossref","DOI":"10.1002\/jmv.29602","article-title":"Cocirculation and coinfection of multiple respiratory viruses during autumn and winter seasons of 2023 in Beijing, China: a retrospective study","volume":"96","author":"Li","year":"2024","journal-title":"J Med Virol"},{"key":"10.1016\/j.ijid.2025.107896_bib0006","unstructured":"World Health Organization. Upsurge of respiratory illnesses among children-Northern China, https:\/\/www.who.int\/emergencies\/disease-outbreak-news\/item\/2023-DON494; 2023 [accessed 17 April 2025]."},{"issue":"2","key":"10.1016\/j.ijid.2025.107896_bib0007","doi-asserted-by":"crossref","first-page":"e100","DOI":"10.1016\/S2666-5247(23)00344-0","article-title":"Mycoplasma pneumoniae: delayed re-emergence after COVID-19 pandemic restrictions","volume":"5","author":"Meyer Sauteur","year":"2024","journal-title":"Lancet Microbe"},{"issue":"1","key":"10.1016\/j.ijid.2025.107896_bib0008","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1007\/s12519-023-00783-x","article-title":"Current status of Mycoplasma pneumoniae infection in China","volume":"20","author":"Yan","year":"2024","journal-title":"World J Pediatr"},{"issue":"6","key":"10.1016\/j.ijid.2025.107896_bib0009","doi-asserted-by":"crossref","first-page":"1168","DOI":"10.1016\/j.cell.2018.02.043","article-title":"Using metagenomics to characterize an expanding virosphere","volume":"172","author":"Zhang","year":"2018","journal-title":"Cell"},{"issue":"7700","key":"10.1016\/j.ijid.2025.107896_bib0010","doi-asserted-by":"crossref","first-page":"197","DOI":"10.1038\/s41586-018-0012-7","article-title":"The evolutionary history of vertebrate RNA viruses","volume":"556","author":"Shi","year":"2018","journal-title":"Nature"},{"issue":"9","key":"10.1016\/j.ijid.2025.107896_bib0011","doi-asserted-by":"crossref","first-page":"2040.e1","DOI":"10.1016\/j.cell.2023.04.002","article-title":"Zoonotic risk assessment among farmed mammals","volume":"186","author":"Lu","year":"2023","journal-title":"Cell"},{"issue":"2","key":"10.1016\/j.ijid.2025.107896_bib0012","doi-asserted-by":"crossref","DOI":"10.2807\/1560-7917.ES.2024.29.2.2300740","article-title":"Humoral immune escape by current SARS-CoV-2 variants BA.2.86 and JN.1, December 2023","volume":"29","author":"Jeworowski","year":"2024","journal-title":"Euro Surveill"},{"issue":"1","key":"10.1016\/j.ijid.2025.107896_bib0013","doi-asserted-by":"crossref","first-page":"2","DOI":"10.1128\/CMR.00019-11","article-title":"Stenotrophomonas maltophilia: an emerging global opportunistic pathogen","volume":"25","author":"Brooke","year":"2012","journal-title":"Clin Microbiol Rev"},{"issue":"4","key":"10.1016\/j.ijid.2025.107896_bib0014","doi-asserted-by":"crossref","first-page":"e28","DOI":"10.1016\/j.jcf.2019.11.004","article-title":"Streptococcus pseudopneumoniae, an opportunistic pathogen in patients with cystic fibrosis","volume":"19","author":"Dupont","year":"2020","journal-title":"J Cyst Fibros"},{"issue":"5","key":"10.1016\/j.ijid.2025.107896_bib0015","doi-asserted-by":"crossref","first-page":"719","DOI":"10.1016\/j.chom.2019.04.001","article-title":"Redondoviridae, a family of small, circular DNA viruses of the human oro-respiratory tract associated with periodontitis and critical illness","volume":"25","author":"Abbas","year":"2019","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.ijid.2025.107896_bib0016","doi-asserted-by":"crossref","first-page":"28","DOI":"10.1016\/j.ijid.2019.05.016","article-title":"Incidence, aetiology, and serotype spectrum analysis of adult hand, foot, and mouth disease patients: a retrospective observational cohort study in northern Zhejiang, China","volume":"85","author":"Yu","year":"2019","journal-title":"Int J Infect Dis"},{"issue":"3","key":"10.1016\/j.ijid.2025.107896_bib0017","doi-asserted-by":"crossref","first-page":"434","DOI":"10.3390\/v13030434","article-title":"World-wide prevalence and genotype distribution of enteroviruses","volume":"13","author":"Brouwer","year":"2021","journal-title":"Viruses"},{"key":"10.1016\/j.ijid.2025.107896_bib0018","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2023.1174410","article-title":"Investigating the mechanism of Echovirus 30 cell invasion","volume":"14","author":"Liang","year":"2023","journal-title":"Front Microbiol"},{"issue":"5","key":"10.1016\/j.ijid.2025.107896_bib0019","doi-asserted-by":"crossref","first-page":"821","DOI":"10.3201\/eid1805.111376","article-title":"Coxsackievirus A21, enterovirus 68, and acute respiratory tract infection, China","volume":"18","author":"Xiang","year":"2012","journal-title":"Emerging Infect Dis"},{"issue":"2","key":"10.1016\/j.ijid.2025.107896_bib0020","doi-asserted-by":"crossref","DOI":"10.2807\/1560-7917.ES.2024.29.2.2300704","article-title":"Increase of respiratory illnesses among children in Beijing, China, during the autumn and winter of 2023","volume":"29","author":"Gong","year":"2024","journal-title":"Eurosurveillance"},{"issue":"4","key":"10.1016\/j.ijid.2025.107896_bib0021","doi-asserted-by":"crossref","first-page":"1124","DOI":"10.1093\/ije\/dyab081","article-title":"Interactions between SARS-CoV-2 and influenza, and the impact of coinfection on disease severity: a test-negative design","volume":"50","author":"Stowe","year":"2021","journal-title":"Int J Epidemiol"},{"issue":"52","key":"10.1016\/j.ijid.2025.107896_bib0022","doi-asserted-by":"crossref","first-page":"27142","DOI":"10.1073\/pnas.1911083116","article-title":"Virus\u2013virus interactions impact the population dynamics of influenza and the common cold","volume":"116","author":"Nickbakhsh","year":"2019","journal-title":"Proc Natl Acad Sci USA"},{"issue":"7","key":"10.1016\/j.ijid.2025.107896_bib0023","doi-asserted-by":"crossref","first-page":"1102","DOI":"10.1093\/infdis\/jix031","article-title":"Interference between respiratory syncytial virus and human rhinovirus infection in infancy","volume":"215","author":"Achten","year":"2017","journal-title":"J Infect Dis"},{"issue":"3","key":"10.1016\/j.ijid.2025.107896_bib0024","doi-asserted-by":"crossref","first-page":"58","DOI":"10.3390\/v9030058","article-title":"Virus-bacteria interactions: an emerging topic in human infection","volume":"9","author":"Almand","year":"2017","journal-title":"Viruses"},{"issue":"1","key":"10.1016\/j.ijid.2025.107896_bib0025","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1146\/annurev-virology-012420-022445","article-title":"Seasonality of respiratory viral infections","volume":"7","author":"Moriyama","year":"2020","journal-title":"Annu Rev Virol"},{"issue":"32","key":"10.1016\/j.ijid.2025.107896_bib0026","doi-asserted-by":"crossref","first-page":"11750","DOI":"10.1021\/acs.est.3c01616","article-title":"Indoor airborne microbiome and endotoxin: meteorological events and occupant characteristics are important determinants","volume":"57","author":"Amin","year":"2023","journal-title":"Environ Sci Technol"},{"issue":"1","key":"10.1016\/j.ijid.2025.107896_bib0027","doi-asserted-by":"crossref","first-page":"3249","DOI":"10.1038\/s41467-021-23440-1","article-title":"Impact of COVID-19 outbreaks and interventions on influenza in China and the United States","volume":"12","author":"Feng","year":"2021","journal-title":"Nat Commun"},{"issue":"11","key":"10.1016\/j.ijid.2025.107896_bib0028","doi-asserted-by":"crossref","first-page":"e1612","DOI":"10.1016\/S2214-109X(22)00358-8","article-title":"Prediction of upcoming global infection burden of influenza seasons after relaxation of public health and social measures during the COVID-19 pandemic: a modelling study","volume":"10","author":"Ali","year":"2022","journal-title":"Lancet Global Health"},{"issue":"4","key":"10.1016\/j.ijid.2025.107896_bib0029","doi-asserted-by":"crossref","first-page":"113","DOI":"10.46234\/ccdcw2025.018","article-title":"Respiratory pathogen profiles of patients\u2014Beijing Municipality, China","volume":"7","author":"Du","year":"2025","journal-title":"China CDC Weekly"},{"issue":"10","key":"10.1016\/j.ijid.2025.107896_bib0030","doi-asserted-by":"crossref","DOI":"10.1128\/spectrum.01116-24","article-title":"Respiratory virus disease and outcomes at a large academic medical center in the United States: a retrospective observational study of the early 2023\/2024 respiratory viral season","volume":"12","author":"Mostafa","year":"2024","journal-title":"Microbiol Spectr"},{"issue":"1","key":"10.1016\/j.ijid.2025.107896_bib0031","doi-asserted-by":"crossref","first-page":"2080","DOI":"10.1080\/22221751.2022.2109516","article-title":"Total RNA sequencing of Phlebotomus chinensis sandflies in China revealed viral, bacterial, and eukaryotic microbes potentially pathogenic to humans","volume":"11","author":"Wang","year":"2022","journal-title":"Emerg Microbes Infect"}],"container-title":["International Journal of Infectious Diseases"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1201971225001195?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1201971225001195?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,2,4]],"date-time":"2026-02-04T11:41:33Z","timestamp":1770205293000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1201971225001195"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,6]]},"references-count":31,"alternative-id":["S1201971225001195"],"URL":"https:\/\/doi.org\/10.1016\/j.ijid.2025.107896","relation":{},"ISSN":["1201-9712"],"issn-type":[{"value":"1201-9712","type":"print"}],"subject":[],"published":{"date-parts":[[2025,6]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Year-round infectome profiling of acute febrile respiratory illness unveiled complex epidemiological dynamics postlifting of COVID-19 restrictions","name":"articletitle","label":"Article Title"},{"value":"International Journal of Infectious Diseases","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.ijid.2025.107896","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases.","name":"copyright","label":"Copyright"}],"article-number":"107896"}}