{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,25]],"date-time":"2026-03-25T05:52:13Z","timestamp":1774417933714,"version":"3.50.1"},"reference-count":21,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2026,4,1]],"date-time":"2026-04-01T00:00:00Z","timestamp":1775001600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,4,1]],"date-time":"2026-04-01T00:00:00Z","timestamp":1775001600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,2,10]],"date-time":"2026-02-10T00:00:00Z","timestamp":1770681600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100000836","name":"University of Liverpool","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100000836","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["clinicalkey.com","clinicalkey.com.au","clinicalkey.es","clinicalkey.fr","clinicalkey.jp","ijidonline.com","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["International Journal of Infectious Diseases"],"published-print":{"date-parts":[[2026,4]]},"DOI":"10.1016\/j.ijid.2026.108479","type":"journal-article","created":{"date-parts":[[2026,2,19]],"date-time":"2026-02-19T00:20:16Z","timestamp":1771460416000},"page":"108479","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"special_numbering":"C","title":["Genotypic-phenotypic discordance for cefiderocol against Enterobacter hormaechei"],"prefix":"10.1016","volume":"165","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-3793-1469","authenticated-orcid":false,"given":"Vineet","family":"Dubey","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6743-4271","authenticated-orcid":false,"given":"Alessandro","family":"Gerada","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0009-0004-0035-6514","authenticated-orcid":false,"given":"Charlotte M.","family":"Jones","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6569-3264","authenticated-orcid":false,"given":"James","family":"Cruise","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6187-878X","authenticated-orcid":false,"given":"William","family":"Hope","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4195-6821","authenticated-orcid":false,"given":"Alex","family":"Howard","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/j.ijid.2026.108479_bib0001","article-title":"Antimicrobial use and resistance","volume":"12","author":"Reza","year":"2025","journal-title":"BMJ"},{"issue":"3","key":"10.1016\/j.ijid.2026.108479_bib0002","doi-asserted-by":"crossref","DOI":"10.1128\/cmr.00279-24","article-title":"Drug-resistant Acinetobacter baumannii: mortality, emerging treatments, and future pharmacological targets for a WHO priority pathogen","volume":"38","author":"Dubey","year":"2025","journal-title":"Clin Microbiol Rev"},{"issue":"7","key":"10.1016\/j.ijid.2026.108479_bib0003","doi-asserted-by":"crossref","first-page":"703","DOI":"10.3390\/antibiotics14070703","article-title":"Mechanisms of cefiderocol resistance in carbapenemase-producing Enterobacterales: insights from comparative genomics","volume":"14","author":"Tristancho-Bar\u00f3","year":"2025","journal-title":"Antibiotics"},{"issue":"1","key":"10.1016\/j.ijid.2026.108479_bib0004","doi-asserted-by":"crossref","first-page":"408","DOI":"10.1186\/s12864-025-11590-1","article-title":"Pan-genome analysis of the Enterobacter hormaechei complex highlights its genomic flexibility and pertinence as a multidrug resistant pathogen","volume":"26","author":"De Maayer","year":"2025","journal-title":"BMC Genomics"},{"key":"10.1016\/j.ijid.2026.108479_bib0005","unstructured":"European Committee on Antimicrobial Susceptibility Testing. Breakpoint tables for interpretation of MICs and zone diameters, version 15.0, 2024. https:\/\/www.eucast.org\/fileadmin\/eucast\/pdf\/breakpoints\/v_15.0_Breakpoint_Tables.pdf [accessed 1 January 2025]."},{"key":"10.1016\/j.ijid.2026.108479_bib0006","article-title":"Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM","volume":"V2","author":"Li","year":"2013","journal-title":"ArXiv"},{"issue":"16","key":"10.1016\/j.ijid.2026.108479_bib0007","doi-asserted-by":"crossref","first-page":"2078","DOI":"10.1093\/bioinformatics\/btp352","article-title":"The sequence alignment\/map format and SAMtools","volume":"25","author":"Li","year":"2009","journal-title":"Bioinformatics"},{"issue":"9","key":"10.1016\/j.ijid.2026.108479_bib0008","doi-asserted-by":"crossref","first-page":"1297","DOI":"10.1101\/gr.107524.110","article-title":"The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data","volume":"20","author":"McKenna","year":"2010","journal-title":"Genome Res"},{"issue":"5","key":"10.1016\/j.ijid.2026.108479_bib0009","doi-asserted-by":"crossref","first-page":"491","DOI":"10.1038\/ng.806","article-title":"A framework for variation discovery and genotyping using next-generation DNA sequencing data","volume":"43","author":"DePristo","year":"2011","journal-title":"Nat Genet"},{"issue":"2","key":"10.1016\/j.ijid.2026.108479_bib0010","doi-asserted-by":"crossref","first-page":"80","DOI":"10.4161\/fly.19695","article-title":"A program for annotating and predicting the effects of single nucleotide polymorphisms","volume":"6","author":"Cingolani","year":"2012","journal-title":"SnpEff Fly (Austin)"},{"issue":"5","key":"10.1016\/j.ijid.2026.108479_bib0011","doi-asserted-by":"crossref","first-page":"455","DOI":"10.1089\/cmb.2012.0021","article-title":"SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing","volume":"19","author":"Bankevich","year":"2012","journal-title":"J Comput Biol"},{"issue":"11","key":"10.1016\/j.ijid.2026.108479_bib0012","article-title":"Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification","volume":"7","author":"Schwengers","year":"2021","journal-title":"Microb Genom"},{"issue":"D1","key":"10.1016\/j.ijid.2026.108479_bib0013","doi-asserted-by":"crossref","first-page":"D690","DOI":"10.1093\/nar\/gkac920","article-title":"CARD 2023: expanded curation, support for machine learning, and resistome prediction at the comprehensive antibiotic resistance database","volume":"51","author":"Alcock","year":"2023","journal-title":"Nucleic Acids Res"},{"issue":"1-2","key":"10.1016\/j.ijid.2026.108479_bib0015","doi-asserted-by":"crossref","first-page":"89","DOI":"10.1016\/j.vetmic.2011.05.023","article-title":"The ins and outs of siderophore mediated iron uptake by extra-intestinal pathogenic Escherichia coli","volume":"153","author":"Gar\u00e9naux","year":"2011","journal-title":"Vet Microbiol"},{"issue":"3","key":"10.1016\/j.ijid.2026.108479_bib0016","doi-asserted-by":"crossref","first-page":"962","DOI":"10.1128\/AAC.50.3.962-967.2006","article-title":"Biochemical and molecular characterization of three new variants of AmpC \u03b2-lactamases from Morganella morganii","volume":"50","author":"Power","year":"2006","journal-title":"Antimicrob Agents Chemother"},{"issue":"7","key":"10.1016\/j.ijid.2026.108479_bib0017","doi-asserted-by":"crossref","first-page":"e00198","DOI":"10.1128\/AAC.00198-20","article-title":"Structural basis of reduced susceptibility to ceftazidime-avibactam and cefiderocol in Enterobacter cloacae due to AmpC R2 loop deletion","volume":"64","author":"Kawai","year":"2020","journal-title":"Antimicrob Agents Chemother"},{"issue":"2","key":"10.1016\/j.ijid.2026.108479_bib0018","doi-asserted-by":"crossref","DOI":"10.1128\/mbio.03165-23","article-title":"Molecular pharmacodynamics of meropenem for nosocomial pneumonia caused by Pseudomonas aeruginosa","volume":"15","author":"Farrington","year":"2024","journal-title":"mBio"},{"issue":"2","key":"10.1016\/j.ijid.2026.108479_bib0019","doi-asserted-by":"crossref","first-page":"490","DOI":"10.1128\/JB.186.2.490-502.2004","article-title":"Genetic analysis of the cell division protein FtsI (PBP3): amino acid substitutions that impair septal localization of FtsI and recruitment of FtsN","volume":"186","author":"Wissel","year":"2004","journal-title":"J Bacteriol"},{"issue":"12","key":"10.1016\/j.ijid.2026.108479_bib0020","doi-asserted-by":"crossref","first-page":"6256","DOI":"10.1128\/AAC.01085-12","article-title":"Effect of transcriptional activators SoxS, RobA, and RamA on expression of multidrug efflux pump AcrAB-TolC in Enterobacter cloacae","volume":"56","author":"P\u00e9rez","year":"2012","journal-title":"Antimicrob Agents Chemother"},{"issue":"3","key":"10.1016\/j.ijid.2026.108479_bib0021","doi-asserted-by":"crossref","DOI":"10.1128\/spectrum.02670-21","article-title":"Occurrence of high levels of cefiderocol resistance in carbapenem-resistant Escherichia coli before its approval in China: a report from China CRE-network","volume":"10","author":"Wang","year":"2022","journal-title":"Microbiol Spectr"},{"key":"10.1016\/j.ijid.2026.108479_bib0022","unstructured":"Mathers A.J., Lewis J.S. II, Bryson A.L., Alby K., Bobenchik A.M., Campeau S., Dingle T., Esparza G., Fisher M.A., Lutgring J., Mitchell S.L., Narayanan N., Palavecino E., Pierce V.M., Schuetz A.N., Simner P.J., Tamma P.D., II MPWAMBSCSKCTDMFGRMHTJKJr, BLAJMVMPMSANSSSPJS. Clinical and Laboratory Standards Institute (CLSI). Performance standards for antimicrobial susceptibility testing. 33rd ed USA: Clinical and Laboratory Standards Institute; 2023. CLSI supplement M100."}],"container-title":["International Journal of Infectious Diseases"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1201971226001141?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1201971226001141?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,3,25]],"date-time":"2026-03-25T04:55:36Z","timestamp":1774414536000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1201971226001141"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,4]]},"references-count":21,"alternative-id":["S1201971226001141"],"URL":"https:\/\/doi.org\/10.1016\/j.ijid.2026.108479","relation":{},"ISSN":["1201-9712"],"issn-type":[{"value":"1201-9712","type":"print"}],"subject":[],"published":{"date-parts":[[2026,4]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Genotypic-phenotypic discordance for cefiderocol against Enterobacter hormaechei","name":"articletitle","label":"Article Title"},{"value":"International Journal of Infectious Diseases","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.ijid.2026.108479","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases.","name":"copyright","label":"Copyright"}],"article-number":"108479"}}