{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,5]],"date-time":"2026-10-05T15:51:32Z","timestamp":1791215492759,"version":"4.1.0"},"reference-count":34,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,6,19]],"date-time":"2026-06-19T00:00:00Z","timestamp":1781827200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100001602","name":"Taighde \u00c9ireann \u2013 Research Ireland","doi-asserted-by":"publisher","award":["18\/CRT\/6214"],"award-info":[{"award-number":["18\/CRT\/6214"]}],"id":[{"id":"10.13039\/501100001602","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100002081","name":"Irish Research Council","doi-asserted-by":"publisher","award":["GOIPG\/2025\/8880"],"award-info":[{"award-number":["GOIPG\/2025\/8880"]}],"id":[{"id":"10.13039\/501100002081","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100002081","name":"Irish Research Council","doi-asserted-by":"publisher","award":["GOIPG\/2023\/4515"],"award-info":[{"award-number":["GOIPG\/2023\/4515"]}],"id":[{"id":"10.13039\/501100002081","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100018172","name":"Department of the Environment, Climate and Communications","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100018172","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100025294","name":"Research Ireland","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100025294","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001589","name":"Environmental Protection Agency","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001589","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["clinicalkey.com","clinicalkey.com.au","clinicalkey.es","clinicalkey.fr","clinicalkey.jp","ijidonline.com","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["International Journal of Infectious Diseases"],"published-print":{"date-parts":[[2026,9]]},"DOI":"10.1016\/j.ijid.2026.108905","type":"journal-article","created":{"date-parts":[[2026,6,20]],"date-time":"2026-06-20T22:25:44Z","timestamp":1781994344000},"page":"108905","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":2,"special_numbering":"C","title":["Wound-associated carbapenemase-producing Gram-negative bacteria in Ireland, 2020-2025: Genomic surveillance of species, carbapenemase mechanisms, and gene location"],"prefix":"10.1016","volume":"170","author":[{"given":"Anna","family":"Tumeo","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kate","family":"Ryan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Francesca","family":"McDonagh","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Aneta","family":"Kov\u00e1\u0159ov\u00e1","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Christina","family":"Clarke","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0944-2206","authenticated-orcid":false,"given":"Georgios","family":"Miliotis","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"issue":"6","key":"10.1016\/j.ijid.2026.108905_bib0001","doi-asserted-by":"crossref","first-page":"731","DOI":"10.1016\/S1473-3099(19)30755-8","article-title":"Molecular and clinical epidemiology of carbapenem-resistant enterobacterales in the USA (CRACKLE-2): a prospective cohort study","volume":"20","author":"van Duin","year":"2020","journal-title":"Lancet Infect Dis"},{"issue":"7","key":"10.1016\/j.ijid.2026.108905_bib0002","doi-asserted-by":"crossref","first-page":"1170","DOI":"10.3201\/eid2007.121004","article-title":"Deaths attributable to carbapenem-resistant Enterobacteriaceae infections","volume":"20","author":"Falagas","year":"2014","journal-title":"Emerg Infect Dis"},{"issue":"7","key":"10.1016\/j.ijid.2026.108905_bib0003","doi-asserted-by":"crossref","first-page":"1700","DOI":"10.1128\/JCM.03264-15","article-title":"Carbapenem-resistant non-glucose-fermenting gram-negative Bacilli: the missing piece to the puzzle","volume":"54","author":"Gniadek","year":"2016","journal-title":"J Clin Microbiol"},{"issue":"1","key":"10.1016\/j.ijid.2026.108905_bib0004","doi-asserted-by":"crossref","first-page":"88","DOI":"10.1186\/s13756-025-01602-w","article-title":"The evolving epidemiology of carbapenemase-producing Enterobacterales in Canadian acute care facilities, 2010\u20132023","volume":"14","author":"Mitchell","year":"2025","journal-title":"Antimicrob Resist Infect Control"},{"issue":"2","key":"10.1016\/j.ijid.2026.108905_bib0005","doi-asserted-by":"crossref","first-page":"137","DOI":"10.1017\/ice.2023.205","article-title":"Active surveillance of carbapenemase-producing Enterobacterales using genomic sequencing for hospital-based infection control interventions","volume":"45","author":"Lee","year":"2024","journal-title":"Infect Control Hosp Epidemiol"},{"issue":"3","key":"10.1016\/j.ijid.2026.108905_bib0006","article-title":"Dissemination of carbapenemase-producing Enterobacterales in Ireland from 2012 to 2017: a retrospective genomic surveillance study","volume":"9","author":"Hadjirin","year":"2023","journal-title":"Microb Genom"},{"issue":"3","key":"10.1016\/j.ijid.2026.108905_bib0007","article-title":"Genomic and phylogenetic analysis of hypervirulent Klebsiella pneumoniae ST23 in Ireland","volume":"11","author":"Maguire","year":"2025","journal-title":"Microb Genom"},{"key":"10.1016\/j.ijid.2026.108905_bib0008","doi-asserted-by":"crossref","DOI":"10.3389\/fcdhc.2024.1393309","article-title":"A systematic review of diabetic foot infections: pathogenesis, diagnosis, and management strategies","volume":"5","author":"Maity","year":"2024","journal-title":"Front Clin Diabetes Healthc"},{"issue":"14","key":"10.1016\/j.ijid.2026.108905_bib0009","doi-asserted-by":"crossref","DOI":"10.3201\/eid3014.240152","article-title":"Molecular surveillance of multidrug-resistant bacteria among refugees from Afghanistan in 2 US military hospitals during Operation Allies Refuge, 2021","volume":"30","author":"Anderson","year":"2024","journal-title":"Emerg Infect Dis"},{"issue":"2","key":"10.1016\/j.ijid.2026.108905_bib0010","doi-asserted-by":"crossref","first-page":"401","DOI":"10.1016\/j.bjm.2017.09.003","article-title":"Epidemiology of diabetic foot infections in a reference tertiary hospital in India","volume":"49","author":"Saseedharan","year":"2018","journal-title":"Braz J Microbiol"},{"issue":"1","key":"10.1016\/j.ijid.2026.108905_bib0011","doi-asserted-by":"crossref","first-page":"157","DOI":"10.1186\/s13756-024-01513-2","article-title":"Screening sites for detection of carbapenemase-producers: a retrospective cohort study","volume":"13","author":"Vock","year":"2024","journal-title":"Antimicrob Resist Infect Control"},{"issue":"8","key":"10.1016\/j.ijid.2026.108905_bib36","doi-asserted-by":"crossref","first-page":"507","DOI":"10.1038\/s41579-024-01035-z","article-title":"The wound microbiota: microbial mechanisms of impaired wound healing and infection","volume":"22","author":"Uberoi","year":"2024","journal-title":"Nat Rev Microbiol"},{"issue":"1","key":"10.1016\/j.ijid.2026.108905_bib0013","doi-asserted-by":"crossref","first-page":"9522","DOI":"10.1038\/s41467-025-64515-7","article-title":"Plasmid dynamics driving carbapenemase gene dissemination in healthcare environments: a nationwide analysis of closed enterobacterales genomes","volume":"16","author":"Koh","year":"2025","journal-title":"Nat Commun"},{"issue":"1","key":"10.1016\/j.ijid.2026.108905_bib0014","doi-asserted-by":"crossref","first-page":"e159","DOI":"10.1093\/infdis\/jiae019","article-title":"Integrated analysis of patient networks and plasmid genomes to investigate a regional, multispecies outbreak of carbapenemase-producing Enterobacterales carrying both bla IMP and mcr-9 genes","volume":"230","author":"Wan","year":"2024","journal-title":"J Infect Dis"},{"issue":"5","key":"10.1016\/j.ijid.2026.108905_bib0015","doi-asserted-by":"crossref","DOI":"10.1128\/JCM.01240-18","article-title":"Identification of the OXA-48 carbapenemase Family by use of tryptic peptides and liquid chromatography-tandem mass spectrometry","volume":"57","author":"Strich","year":"2019","journal-title":"J Clin Microbiol"},{"issue":"6","key":"10.1016\/j.ijid.2026.108905_bib0016","doi-asserted-by":"crossref","first-page":"1925","DOI":"10.1093\/bioinformatics\/btz848","article-title":"GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database","volume":"36","author":"Chaumeil","year":"2020","journal-title":"Bioinformatics"},{"issue":"21","key":"10.1016\/j.ijid.2026.108905_bib0017","doi-asserted-by":"crossref","first-page":"3340","DOI":"10.1093\/bioinformatics\/btx433","article-title":"ISEScan: automated identification of insertion sequence elements in prokaryotic genomes","volume":"33","author":"Xie","year":"2017","journal-title":"Bioinformatics"},{"issue":"3","key":"10.1016\/j.ijid.2026.108905_bib0018","doi-asserted-by":"crossref","DOI":"10.1128\/aac.00785-24","article-title":"\u03b2-lactamase diversity in Pseudomonas aeruginosa","volume":"69","author":"Mack","year":"2025","journal-title":"Antimicrob Agents Chemother"},{"key":"10.1016\/j.ijid.2026.108905_bib0019","unstructured":"Health Protection Surveillance Centre. Summary report on Carbapenemase producing Enterobacterales (CPE) in Ireland: April 2025. Dublin, Ireland; 2025 https:\/\/www.hpsc.ie\/a-z\/microbiologyantimicrobialresistance\/carbapenemresistantenterobacteriaceaecre\/surveillanceofcpeinireland\/cpemonthlysurveillancereports\/Mth%2004%20AMRIC%20April%202025%20CPE%20monthly%20report.pdf. Accessed 12 March 2026."},{"key":"10.1016\/j.ijid.2026.108905_bib0020","unstructured":"Health Protection Surveillance Centre. Summary report on carbapenemase producing Enterobacterales (CPE) in Ireland: August 2025. Dublin, Ireland; 2025. https:\/\/www.hpsc.ie\/a-z\/microbiologyantimicrobialresistance\/carbapenemresistantenterobacteriaceaecre\/surveillanceofcpeinireland\/cpemonthlysurveillancereports\/Mth%2008%20AMRIC%20August%202025%20CPE%20monthly%20report.pdf. Accessed 12 March, 2026."},{"key":"10.1016\/j.ijid.2026.108905_bib0021","doi-asserted-by":"crossref","first-page":"107","DOI":"10.1016\/j.jhin.2021.01.001","article-title":"Initial impact of a national programme to contain the spread of carbapenemase-producing Enterobacterales in Ireland","volume":"109","author":"Vellinga","year":"2021","journal-title":"J Hosp Infect"},{"key":"10.1016\/j.ijid.2026.108905_bib0022","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/j.scitotenv.2019.06.480","article-title":"Detection of OXA-48-like-producing Enterobacterales in Irish recreational water","volume":"690","author":"Mahon","year":"2019","journal-title":"Sci Total Environ"},{"key":"10.1016\/j.ijid.2026.108905_bib0023","unstructured":"Health Protection Surveillance Centre. Enhanced surveillance of carbapenemase-producing Enterobacterales (CPE) 2024. Dublin, Ireland; 2025. https:\/\/www.hpsc.ie\/a-z\/microbiologyantimicrobialresistance\/carbapenemresistantenterobacteriaceaecre\/surveillanceofcpeinireland\/cpeannualreports\/FINAL_CPE_2024_report_10012025.pdf. Accessed 12 March, 2026."},{"key":"10.1016\/j.ijid.2026.108905_bib0024","doi-asserted-by":"crossref","first-page":"62","DOI":"10.1016\/j.jgar.2024.11.018","article-title":"Draft genome sequence of a co-harbouring blaNDM-5 and mcr-1.1 Escherichia coli phylogroup A isolate associated with patient colonisation in Ireland","volume":"40","author":"Tumeo","year":"2025","journal-title":"J Glob Antimicrob Resist"},{"issue":"12","key":"10.1016\/j.ijid.2026.108905_bib0025","doi-asserted-by":"crossref","first-page":"3125","DOI":"10.1093\/jac\/dkab306","article-title":"Increasing frequency of OXA-48-producing Enterobacterales worldwide and activity of ceftazidime\/avibactam, meropenem\/vaborbactam and comparators against these isolates","volume":"76","author":"Castanheira","year":"2021","journal-title":"J Antimicrob Chemother"},{"issue":"8","key":"10.1016\/j.ijid.2026.108905_bib0027","doi-asserted-by":"crossref","DOI":"10.1128\/aac.00216-22","article-title":"OXA-48-like \u03b2-lactamases: global epidemiology, treatment options, and development pipeline","volume":"66","author":"Boyd","year":"2022","journal-title":"Antimicrob Agents Chemother"},{"issue":"7","key":"10.1016\/j.ijid.2026.108905_bib0028","doi-asserted-by":"crossref","first-page":"1856","DOI":"10.1093\/jac\/dkz136","article-title":"An MLST approach to support tracking of plasmids carrying OXA-48-like carbapenemase","volume":"74","author":"Brehony","year":"2019","journal-title":"J Antimicrob Chemother"},{"key":"10.1016\/j.ijid.2026.108905_bib0029","doi-asserted-by":"crossref","DOI":"10.1016\/j.meegid.2026.105899","article-title":"Emergence of dual \u03b2-lactam and colistin resistance via blaFRI-8 and mcr-10.2 co-carriage on an IncFII-family plasmid in Enterobacter vonholyi. Infection","volume":"139","author":"Kovarova","year":"2026","journal-title":"Genet Evol"},{"key":"10.1016\/j.ijid.2026.108905_bib0030","doi-asserted-by":"crossref","first-page":"226","DOI":"10.1016\/j.jgar.2025.07.003","article-title":"Characterisation of Citrobacter freundii and Enterobacter cloacae complex isolates co-carrying blaNDM-1 and mcr-9 from three hospitals","volume":"44","author":"Kovarova","year":"2025","journal-title":"J Glob Antimicrob Resist"},{"issue":"4","key":"10.1016\/j.ijid.2026.108905_bib0031","doi-asserted-by":"crossref","first-page":"1257","DOI":"10.1128\/AAC.01451-07","article-title":"Genetic structures at the origin of acquisition of the \u03b2-lactamase bla KPC gene","volume":"52","author":"Naas","year":"2008","journal-title":"Antimicrob Agents Chemother"},{"issue":"8","key":"10.1016\/j.ijid.2026.108905_bib0032","doi-asserted-by":"crossref","DOI":"10.1128\/spectrum.00126-25","volume":"13","author":"Halder","year":"2025","journal-title":"Microbiol Spectr"},{"issue":"9","key":"10.1016\/j.ijid.2026.108905_bib0033","doi-asserted-by":"crossref","first-page":"4753","DOI":"10.1128\/AAC.00334-12","article-title":"Role of IS Kpn7 and deletions in bla KPC gene expression","volume":"56","author":"Naas","year":"2012","journal-title":"Antimicrob Agents Chemother"},{"issue":"2","key":"10.1016\/j.ijid.2026.108905_bib0034","doi-asserted-by":"crossref","DOI":"10.1093\/jacamr\/dlae028","article-title":"Comparison of carbapenem MIC for NDM-producing Enterobacterales by different AST methods","volume":"6","author":"Lee","year":"2024","journal-title":"JAC Antimicrob Resist"},{"issue":"1","key":"10.1016\/j.ijid.2026.108905_bib0035","doi-asserted-by":"crossref","first-page":"682","DOI":"10.1128\/AAC.01436-13","article-title":"Identification of VIM-2-producing Pseudomonas aeruginosa from Tanzania is associated with sequence types 244 and 640 and the location of bla VIM-2 in a TniC integron","volume":"59","author":"Moyo","year":"2015","journal-title":"Antimicrob Agents Chemother"}],"container-title":["International Journal of Infectious Diseases"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1201971226005400?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1201971226005400?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,10,5]],"date-time":"2026-10-05T15:00:09Z","timestamp":1791212409000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1201971226005400"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,9]]},"references-count":34,"alternative-id":["S1201971226005400"],"URL":"https:\/\/doi.org\/10.1016\/j.ijid.2026.108905","relation":{},"ISSN":["1201-9712"],"issn-type":[{"value":"1201-9712","type":"print"}],"subject":[],"published":{"date-parts":[[2026,9]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Wound-associated carbapenemase-producing Gram-negative bacteria in Ireland, 2020-2025: Genomic surveillance of species, carbapenemase mechanisms, and gene location","name":"articletitle","label":"Article Title"},{"value":"International Journal of Infectious Diseases","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.ijid.2026.108905","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 The Authors. Published by Elsevier Ltd on behalf of International Society for Infectious Diseases.","name":"copyright","label":"Copyright"}],"article-number":"108905"}}