{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,24]],"date-time":"2026-09-24T17:26:45Z","timestamp":1790270805930,"version":"4.1.0"},"reference-count":74,"publisher":"Elsevier BV","issue":"5","license":[{"start":{"date-parts":[[2019,7,1]],"date-time":"2019-07-01T00:00:00Z","timestamp":1561939200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2019,7,1]],"date-time":"2019-07-01T00:00:00Z","timestamp":1561939200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"}],"funder":[{"DOI":"10.13039\/501100018935","name":"Universit\u00e4tsklinikum Erlangen","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100018935","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001652","name":"Friedrich-Alexander-Universit\u00e4t Erlangen-N\u00fcrnberg","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001652","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"publisher","award":["Go983\/4-1"],"award-info":[{"award-number":["Go983\/4-1"]}],"id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["clinicalkey.com","clinicalkey.com.au","clinicalkey.es","clinicalkey.fr","clinicalkey.jp","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["International Journal of Medical Microbiology"],"published-print":{"date-parts":[[2019,7]]},"DOI":"10.1016\/j.ijmm.2019.05.007","type":"journal-article","created":{"date-parts":[[2019,6,1]],"date-time":"2019-06-01T10:35:09Z","timestamp":1559385309000},"page":"307-318","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":26,"title":["Type I interferon induced by TLR2-TLR4-MyD88-TRIF-IRF3 controls Mycobacterium abscessus subsp. abscessus persistence in murine macrophages via nitric oxide"],"prefix":"10.1016","volume":"309","author":[{"given":"Nanthapon","family":"Ruangkiattikul","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Doris","family":"Rys","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ketema","family":"Abdissa","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Manfred","family":"Rohde","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2225-7267","authenticated-orcid":false,"given":"Torsten","family":"Semmler","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Pia-K.","family":"Tegtmeyer","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ulrich","family":"Kalinke","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3474-2857","authenticated-orcid":false,"given":"Carsten","family":"Schwarz","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9051-9935","authenticated-orcid":false,"given":"Astrid","family":"Lewin","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ralph","family":"Goethe","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.ijmm.2019.05.007_bib0005","doi-asserted-by":"crossref","first-page":"49","DOI":"10.1016\/j.chom.2016.06.003","article-title":"Group B Streptococcus Degrades Cyclic-di-AMP to modulate STING-Dependent type I interferon production","volume":"20","author":"Andrade","year":"2016","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0010","doi-asserted-by":"crossref","first-page":"890","DOI":"10.3389\/fimmu.2017.00890","article-title":"Type I interferon supports inducible nitric oxide synthase in murine hepatoma cells and hepatocytes and during experimental acetaminophen-induced liver damage","volume":"8","author":"Bachmann","year":"2017","journal-title":"Front. Immunol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0015","doi-asserted-by":"crossref","first-page":"455","DOI":"10.1089\/cmb.2012.0021","article-title":"SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing","volume":"19","author":"Bankevich","year":"2012","journal-title":"J. Comput. Biol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0020","doi-asserted-by":"crossref","first-page":"E943","DOI":"10.1073\/pnas.1321390111","article-title":"Mycobacterium abscessus cording prevents phagocytosis and promotes abscess formation","volume":"111","author":"Bernut","year":"2014","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0025","doi-asserted-by":"crossref","first-page":"161","DOI":"10.1016\/j.it.2015.01.003","article-title":"Nitric oxide synthase in innate and adaptive immunity: an update","volume":"36","author":"Bogdan","year":"2015","journal-title":"Trends Immunol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0030","doi-asserted-by":"crossref","first-page":"237","DOI":"10.1186\/1471-2180-10-237","article-title":"The non-pathogenic mycobacteria M. smegmatis and M. fortuitum induce rapid host cell apoptosis via a caspase-3 and TNF dependent pathway","volume":"10","author":"Bohsali","year":"2010","journal-title":"BMC Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0035","doi-asserted-by":"crossref","first-page":"975","DOI":"10.1038\/nrd2422","article-title":"Interferons at age 50: past, current and future impact on biomedicine","volume":"6","author":"Borden","year":"2007","journal-title":"Nat. Rev. Drug Discov."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0040","doi-asserted-by":"crossref","first-page":"760","DOI":"10.1016\/j.chom.2016.05.016","article-title":"The roles of type I interferon in bacterial infection","volume":"19","author":"Boxx","year":"2016","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0045","doi-asserted-by":"crossref","first-page":"1562","DOI":"10.3389\/fmicb.2016.01562","article-title":"Mycobacteria clumping increase their capacity to damage macrophages","volume":"7","author":"Brambilla","year":"2016","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0050","doi-asserted-by":"crossref","first-page":"751","DOI":"10.1126\/science.aaf8156","article-title":"Emergence and spread of a human-transmissible multidrug-resistant nontuberculous mycobacterium","volume":"354","author":"Bryant","year":"2016","journal-title":"Science"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0055","doi-asserted-by":"crossref","first-page":"4700","DOI":"10.1128\/IAI.67.9.4700-4707.1999","article-title":"Preliminary characterization of a Mycobacterium abscessus mutant in human and murine models of infection","volume":"67","author":"Byrd","year":"1999","journal-title":"Infect. Immun."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0060","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0067277","article-title":"Mycobacterium tuberculosis strains are differentially recognized by TLRs with an impact on the immune response","volume":"8","author":"Carmona","year":"2013","journal-title":"PLoS One"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0065","doi-asserted-by":"crossref","first-page":"74","DOI":"10.1016\/j.jcf.2012.06.009","article-title":"Mycobacterium avium and Mycobacterium abscessus complex target distinct cystic fibrosis patient subpopulations","volume":"12","author":"Catherinot","year":"2013","journal-title":"J. Cyst. Fibros."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0070","doi-asserted-by":"crossref","first-page":"606","DOI":"10.1165\/ajrcmb.25.5.4487","article-title":"What is the role of nitric oxide in murine and human host defense against tuberculosis?Current knowledge","volume":"25","author":"Chan","year":"2001","journal-title":"Am. J. Respir. Cell Mol. Biol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0075","doi-asserted-by":"crossref","DOI":"10.1084\/jem.20180508","article-title":"Mycobacterium tuberculosis-induced IFN-beta production requires cytosolic DNA and RNA sensing pathways","author":"Cheng","year":"2018","journal-title":"J. Exp. Med."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0080","doi-asserted-by":"crossref","first-page":"1107","DOI":"10.1128\/JCM.02318-10","article-title":"Efficient differentiation of Mycobacterium abscessus complex isolates to the species level by a novel PCR-based variable-number tandem-repeat assay","volume":"49","author":"Choi","year":"2011","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0085","doi-asserted-by":"crossref","first-page":"820","DOI":"10.1016\/j.chom.2015.05.005","article-title":"Cyclic GMP-AMP synthase is an innate immune DNA sensor for Mycobacterium tuberculosis","volume":"17","author":"Collins","year":"2015","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0090","doi-asserted-by":"crossref","first-page":"969","DOI":"10.3201\/eid1906.121012","article-title":"Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee","volume":"19","author":"Coscolla","year":"2013","journal-title":"Emerg. Infect. Dis."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0095","doi-asserted-by":"crossref","first-page":"3193","DOI":"10.4049\/jimmunol.177.5.3193","article-title":"Type I IFNs stimulate nitric oxide production and resistance to Trypanosoma cruzi infection","volume":"177","author":"Costa","year":"2006","journal-title":"J. Immunol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0100","doi-asserted-by":"crossref","first-page":"1857","DOI":"10.1128\/iai.59.5.1857-1859.1991","article-title":"Recombinant murine beta interferon enhances resistance of mice to systemic Mycobacterium avium infection","volume":"59","author":"Denis","year":"1991","journal-title":"Infect. Immun."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0105","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0010250","article-title":"Murine toll-like receptor 2 activation induces type I interferon responses from endolysosomal compartments","volume":"5","author":"Dietrich","year":"2010","journal-title":"PLoS One"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0110","doi-asserted-by":"crossref","first-page":"3089","DOI":"10.1099\/00221287-148-10-3089","article-title":"The impact of the absence of glycopeptidolipids on the ultrastructure, cell surface and cell wall properties, and phagocytosis of Mycobacterium smegmatis","volume":"148","author":"Etienne","year":"2002","journal-title":"Microbiology"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0115","doi-asserted-by":"crossref","first-page":"249","DOI":"10.1016\/j.jns.2015.01.004","article-title":"Role of interferon-beta in Mycobacterium avium subspecies paratuberculosis antibody response in Sardinian MS patients","volume":"349","author":"Frau","year":"2015","journal-title":"J. Neurol. Sci."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0120","doi-asserted-by":"crossref","first-page":"1654","DOI":"10.15252\/embj.201488029","article-title":"Listeria monocytogenes induces IFNbeta expression through an IFI16-, cGAS- and STING-dependent pathway","volume":"33","author":"Hansen","year":"2014","journal-title":"EMBO J."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0125","doi-asserted-by":"crossref","first-page":"1581","DOI":"10.1099\/mic.0.28625-0","article-title":"Spontaneous reversion of Mycobacterium abscessus from a smooth to a rough morphotype is associated with reduced expression of glycopeptidolipid and reacquisition of an invasive phenotype","volume":"152","author":"Howard","year":"2006","journal-title":"Microbiology"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0130","doi-asserted-by":"crossref","first-page":"1873","DOI":"10.1084\/jem.20090213","article-title":"Type I interferon drives tumor necrosis factor-induced lethal shock","volume":"206","author":"Huys","year":"2009","journal-title":"J. Exp. Med."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0135","doi-asserted-by":"crossref","first-page":"47950","DOI":"10.1074\/jbc.M106639200","article-title":"Lipopolysaccharide-induced expression of interferon-beta mediates the timing of inducible nitric-oxide synthase induction in RAW 264.7 macrophages","volume":"276","author":"Jacobs","year":"2001","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0140","doi-asserted-by":"crossref","first-page":"104","DOI":"10.1016\/j.cyto.2017.10.006","article-title":"Mycobacterium tuberculosis ESAT6 induces IFN-beta gene expression in Macrophages via TLRs-mediated signaling","volume":"104","author":"Jang","year":"2018","journal-title":"Cytokine"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0145","doi-asserted-by":"crossref","first-page":"424","DOI":"10.1165\/rcmb.2008-0408OC","article-title":"TLR-4-mediated innate immunity is reduced in cystic fibrosis airway cells","volume":"42","author":"John","year":"2010","journal-title":"Am. J. Respir. Cell Mol. Biol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0150","doi-asserted-by":"crossref","first-page":"1497","DOI":"10.1128\/JCM.02592-06","article-title":"Molecular epidemiology of Mycobacterium abscessus, with focus on cystic fibrosis","volume":"45","author":"Jonsson","year":"2007","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0155","doi-asserted-by":"crossref","first-page":"1556","DOI":"10.1128\/IAI.02853-14","article-title":"Essential engagement of Toll-like receptor 2 in initiation of early protective Th1 response against rough variants of Mycobacterium abscessus","volume":"83","author":"Kim","year":"2015","journal-title":"Infect. Immun."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0160","doi-asserted-by":"crossref","first-page":"464","DOI":"10.1007\/s12088-015-0543-7","article-title":"The incidence of non-tuberculous Mycobacterium lung disease in patients with suspected pulmonary tuberculosis","volume":"55","author":"Kim","year":"2015","journal-title":"Indian J. Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0165","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0183526","article-title":"Transcriptomic profile of cystic fibrosis patients identifies type I interferon response and ribosomal stalk proteins as potential modifiers of disease severity","volume":"12","author":"Kormann","year":"2017","journal-title":"PLoS One"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0170","doi-asserted-by":"crossref","first-page":"39","DOI":"10.1111\/j.1365-2567.2006.02337.x","article-title":"Interferon-alphabeta mediates partial control of early pulmonary Mycobacterium bovis bacillus Calmette-Guerin infection","volume":"118","author":"Kuchtey","year":"2006","journal-title":"Immunology"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0175","doi-asserted-by":"crossref","first-page":"551","DOI":"10.1046\/j.1462-5822.2001.00139.x","article-title":"Characterization of the intracellular survival of Mycobacterium avium ssp. paratuberculosis: phagosomal pH and fusogenicity in J774 macrophages compared with other mycobacteria","volume":"3","author":"Kuehnel","year":"2001","journal-title":"Cell. Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0180","doi-asserted-by":"crossref","first-page":"1477","DOI":"10.3389\/fimmu.2017.01477","article-title":"Nucleotide-binding oligomerization domain 2 contributes to limiting growth of Mycobacterium abscessus in the lung of mice by regulating cytokines and nitric oxide production","volume":"8","author":"Lee","year":"2017","journal-title":"Front. Immunol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0185","doi-asserted-by":"crossref","first-page":"1638","DOI":"10.3201\/2109.141634","article-title":"Mycobacterium abscessus complex infections in humans","volume":"21","author":"Lee","year":"2015","journal-title":"Emerg Infect. Dis."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0190","doi-asserted-by":"crossref","first-page":"512","DOI":"10.5483\/BMBRep.2014.47.9.001","article-title":"Mycobacterium abscessus MAB2560 induces maturation of dendritic cells via Toll-like receptor 4 and drives Th1 immune response","volume":"47","author":"Lee","year":"2014","journal-title":"BMB Rep."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0195","doi-asserted-by":"crossref","first-page":"3229","DOI":"10.4049\/jimmunol.0804277","article-title":"Novel reporter mouse reveals constitutive and inflammatory expression of IFN-beta in vivo","volume":"183","author":"Lienenklaus","year":"2009","journal-title":"J. Immunol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0200","doi-asserted-by":"crossref","first-page":"5243","DOI":"10.1073\/pnas.94.10.5243","article-title":"Identification of nitric oxide synthase as a protective locus against tuberculosis","volume":"94","author":"MacMicking","year":"1997","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0205","doi-asserted-by":"crossref","first-page":"259","DOI":"10.3389\/fimmu.2017.00259","article-title":"Type I interferons as regulators of lung inflammation","volume":"8","author":"Makris","year":"2017","journal-title":"Front. Immunol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0210","doi-asserted-by":"crossref","first-page":"469","DOI":"10.1016\/j.chom.2012.03.007","article-title":"Mycobacterium tuberculosis activates the DNA-dependent cytosolic surveillance pathway within macrophages","volume":"11","author":"Manzanillo","year":"2012","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0215","doi-asserted-by":"crossref","first-page":"514","DOI":"10.1136\/thx.2005.054643","article-title":"Inducible NO synthase expression is low in airway epithelium from young children with cystic fibrosis","volume":"61","author":"Moeller","year":"2006","journal-title":"Thorax"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0220","doi-asserted-by":"crossref","first-page":"1273","DOI":"10.1084\/jem.20180325","article-title":"Type I interferons in tuberculosis: foe and occasionally friend","volume":"215","author":"Moreira-Teixeira","year":"2018","journal-title":"J. Exp. Med."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0225","doi-asserted-by":"crossref","first-page":"4714","DOI":"10.4049\/jimmunol.1600584","article-title":"Type I IFN inhibits alternative macrophage activation during Mycobacterium tuberculosis infection and leads to enhanced protection in the absence of IFN-gamma signaling","volume":"197","author":"Moreira-Teixeira","year":"2016","journal-title":"J. Immunol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0230","doi-asserted-by":"crossref","first-page":"1874","DOI":"10.1126\/science.312.5782.1874b","article-title":"Role of iNOS in human host defense","volume":"312","author":"Nathan","year":"2006","journal-title":"Science"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0235","doi-asserted-by":"crossref","first-page":"1187","DOI":"10.1099\/mic.0.046557-0","article-title":"Deletion of the mmpL4b gene in the Mycobacterium abscessus glycopeptidolipid biosynthetic pathway results in loss of surface colonization capability, but enhanced ability to replicate in human macrophages and stimulate their innate immune response","volume":"157","author":"Nessar","year":"2011","journal-title":"Microbiology"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0240","first-page":"76","article-title":"Host-pathogen redox dynamics modulate Mycobacterium tuberculosis pathogenesis","author":"Pacl","year":"2018","journal-title":"Pathog. Dis."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0245","doi-asserted-by":"crossref","first-page":"3691","DOI":"10.1093\/bioinformatics\/btv421","article-title":"Roary: rapid large-scale prokaryote pan genome analysis","volume":"31","author":"Page","year":"2015","journal-title":"Bioinformatics"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0250","doi-asserted-by":"crossref","first-page":"39492","DOI":"10.1038\/srep39492","article-title":"Infergen stimulated macrophages restrict Mycobacterium tuberculosis growth by autophagy and release of nitric oxide","volume":"6","author":"Pahari","year":"2016","journal-title":"Sci. Rep."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0255","doi-asserted-by":"crossref","first-page":"6","DOI":"10.1165\/rcmb.2011-0080OC","article-title":"Induction of type I interferon signaling by Pseudomonas aeruginosa is diminished in cystic fibrosis epithelial cells","volume":"46","author":"Parker","year":"2012","journal-title":"Am. J. Respir. Cell Mol. Biol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0260","doi-asserted-by":"crossref","first-page":"612","DOI":"10.1111\/mmi.12387","article-title":"Identification and characterization of the genetic changes responsible for the characteristic smooth-to-rough morphotype alterations of clinically persistent Mycobacterium abscessus","volume":"90","author":"Pawlik","year":"2013","journal-title":"Mol. Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0265","doi-asserted-by":"crossref","first-page":"46","DOI":"10.1016\/j.jcf.2014.08.002","article-title":"Epidemiology of nontuberculous mycobacteria among patients with cystic fibrosis in Scandinavia","volume":"14","author":"Qvist","year":"2015","journal-title":"J. Cyst. Fibros."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0270","doi-asserted-by":"crossref","first-page":"1997","DOI":"10.4049\/jimmunol.0802181","article-title":"Mycobacterium abscessus Glycopeptidolipids mask underlying cell wall phosphatidyl-myo-inositol mannosides blocking induction of human macrophage TNF-alpha by preventing interaction with TLR2","volume":"183","author":"Rhoades","year":"2009","journal-title":"J. Immunol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0275","doi-asserted-by":"crossref","first-page":"2941","DOI":"10.1093\/bioinformatics\/btx330","article-title":"Flexbar 3.0 - SIMD and multicore parallelization","volume":"33","author":"Roehr","year":"2017","journal-title":"Bioinformatics"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0280","doi-asserted-by":"crossref","first-page":"692","DOI":"10.1111\/j.1462-5822.2010.01565.x","article-title":"Overexpression of proinflammatory TLR-2-signalling lipoproteins in hypervirulent mycobacterial variants","volume":"13","author":"Roux","year":"2011","journal-title":"Cell. Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0285","doi-asserted-by":"crossref","DOI":"10.1098\/rsob.160185","article-title":"The distinct fate of smooth and rough Mycobacterium abscessus variants inside macrophages","volume":"6","author":"Roux","year":"2016","journal-title":"Open Biol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0290","doi-asserted-by":"crossref","first-page":"1303","DOI":"10.1080\/21505594.2017.1321191","article-title":"cGAS-STING-TBK1-IRF3\/7 induced interferon-beta contributes to the clearing of non tuberculous mycobacterial infection in mice","volume":"8","author":"Ruangkiattikul","year":"2017","journal-title":"Virulence"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0295","doi-asserted-by":"crossref","first-page":"244","DOI":"10.1128\/JCM.01249-13","article-title":"Characterization of rough and smooth morphotypes of Mycobacterium abscessus isolates from clinical specimens","volume":"52","author":"Ruger","year":"2014","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0300","doi-asserted-by":"crossref","first-page":"2642","DOI":"10.3389\/fmicb.2018.02642","article-title":"Mycobacterium abscessus: shapeshifter of the mycobacterial world","volume":"9","author":"Ryan","year":"2018","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0305","doi-asserted-by":"crossref","DOI":"10.1183\/13993003.02127-2017","article-title":"Inhaled granulocyte-macrophage colony-stimulating factor for Mycobacterium abscessus in cystic fibrosis","volume":"51","author":"Scott","year":"2018","journal-title":"Eur. Respir. J."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0310","doi-asserted-by":"crossref","first-page":"4057","DOI":"10.1128\/JCM.00904-10","article-title":"Efficient differentiation of Mycobacterium avium complex species and subspecies by use of five-target multiplex PCR","volume":"48","author":"Shin","year":"2010","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0315","doi-asserted-by":"crossref","first-page":"1312","DOI":"10.1093\/bioinformatics\/btu033","article-title":"RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies","volume":"30","author":"Stamatakis","year":"2014","journal-title":"Bioinformatics"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0320","doi-asserted-by":"crossref","first-page":"479","DOI":"10.3389\/fimmu.2014.00479","article-title":"Of mice and men\": arginine metabolism in macrophages","volume":"5","author":"Thomas","year":"2014","journal-title":"Front. Immunol."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0325","doi-asserted-by":"crossref","first-page":"2053","DOI":"10.1084\/jem.20101664","article-title":"Type I interferon: friend or foe?","volume":"207","author":"Trinchieri","year":"2010","journal-title":"J. Exp. Med."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0330","doi-asserted-by":"crossref","first-page":"6161","DOI":"10.1128\/AAC.01132-15","article-title":"Subinhibitory doses of aminoglycoside antibiotics induce changes in the phenotype of Mycobacterium abscessus","volume":"59","author":"Tsai","year":"2015","journal-title":"Antimicrob. Agents Chemother."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0335","doi-asserted-by":"crossref","first-page":"705","DOI":"10.1084\/jem.20030205","article-title":"Inhibition of respiration by nitric oxide induces a Mycobacterium tuberculosis dormancy program","volume":"198","author":"Voskuil","year":"2003","journal-title":"J. Exp. Med."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0340","doi-asserted-by":"crossref","first-page":"799","DOI":"10.1016\/j.chom.2015.05.003","article-title":"Mycobacterium tuberculosis differentially activates cGAS- and inflammasome-dependent intracellular immune responses through ESX-1","volume":"17","author":"Wassermann","year":"2015","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0345","doi-asserted-by":"crossref","first-page":"386","DOI":"10.1159\/000445906","article-title":"Pulmonary disease caused by non-tuberculous mycobacteria","volume":"91","author":"Wassilew","year":"2016","journal-title":"Respiration"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0350","doi-asserted-by":"crossref","first-page":"811","DOI":"10.1016\/j.chom.2015.05.004","article-title":"The cytosolic sensor cGAS detects Mycobacterium tuberculosis DNA to induce type I interferons and activate autophagy","volume":"17","author":"Watson","year":"2015","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.ijmm.2019.05.007_bib0355","doi-asserted-by":"crossref","first-page":"336","DOI":"10.1097\/INF.0000000000001780","article-title":"Compassionate nitric oxide adjuvant treatment of persistent Mycobacterium infection in cystic fibrosis patients","volume":"37","author":"Yaacoby-Bianu","year":"2018","journal-title":"Pediatr. Infect. Dis. J."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0360","doi-asserted-by":"crossref","first-page":"27326","DOI":"10.1038\/srep27326","article-title":"Macrophage-mediated inflammatory response decreases mycobacterial survival in mouse MSCs by augmenting NO production","volume":"6","author":"Yang","year":"2016","journal-title":"Sci. Rep."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0365","doi-asserted-by":"crossref","first-page":"173","DOI":"10.1179\/1973947812Y.0000000005","article-title":"The effect of combination IFN-alpha-2a with usual antituberculosis chemotherapy in non-responding tuberculosis and diabetes mellitus: a case report and review of the literature","volume":"24","author":"Zarogoulidis","year":"2012","journal-title":"J. Chemother."},{"key":"10.1016\/j.ijmm.2019.05.007_bib0370","doi-asserted-by":"crossref","first-page":"1649","DOI":"10.1128\/IAI.01251-07","article-title":"Stimulation of inducible nitric oxide synthase expression by beta interferon increases necrotic death of macrophages upon Listeria monocytogenes infection","volume":"76","author":"Zwaferink","year":"2008","journal-title":"Infect. Immun."}],"container-title":["International Journal of Medical Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1438422118306155?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1438422118306155?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,10,25]],"date-time":"2025-10-25T16:59:53Z","timestamp":1761411593000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1438422118306155"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,7]]},"references-count":74,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2019,7]]}},"alternative-id":["S1438422118306155"],"URL":"https:\/\/doi.org\/10.1016\/j.ijmm.2019.05.007","relation":{},"ISSN":["1438-4221"],"issn-type":[{"value":"1438-4221","type":"print"}],"subject":[],"published":{"date-parts":[[2019,7]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Type I interferon induced by TLR2-TLR4-MyD88-TRIF-IRF3 controls Mycobacterium abscessus subsp. abscessus persistence in murine macrophages via nitric oxide","name":"articletitle","label":"Article Title"},{"value":"International Journal of Medical Microbiology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.ijmm.2019.05.007","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2019 Elsevier GmbH. All rights reserved.","name":"copyright","label":"Copyright"}]}}