{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T13:30:49Z","timestamp":1793539849489,"version":"4.5.0"},"reference-count":29,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2025,12,1]],"date-time":"2025-12-01T00:00:00Z","timestamp":1764547200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,12,1]],"date-time":"2025-12-01T00:00:00Z","timestamp":1764547200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,9,9]],"date-time":"2025-09-09T00:00:00Z","timestamp":1757376000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100007917","name":"USDA Agricultural Research Service","doi-asserted-by":"publisher","award":["58-3022-4-048"],"award-info":[{"award-number":["58-3022-4-048"]}],"id":[{"id":"10.13039\/100007917","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100007865","name":"University of Texas Medical Branch","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100007865","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100011615","name":"University of Ruhuna","doi-asserted-by":"publisher","award":["15.02.2018.3.13"],"award-info":[{"award-number":["15.02.2018.3.13"]}],"id":[{"id":"10.13039\/501100011615","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100006511","name":"Duke University Global Health Institute","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100006511","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["IJID Regions"],"published-print":{"date-parts":[[2025,12]]},"DOI":"10.1016\/j.ijregi.2025.100757","type":"journal-article","created":{"date-parts":[[2025,9,11]],"date-time":"2025-09-11T01:32:23Z","timestamp":1757554343000},"page":"100757","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":7,"special_numbering":"C","title":["Diverse respiratory viruses detected among hospitalized patients with pneumonia in Sri Lanka and Vietnam"],"prefix":"10.1016","volume":"17","author":[{"given":"Phuong Thu","family":"Phan","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gaya","family":"Wijayaratne","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Champica K.","family":"Bodinayake","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Judith U.","family":"Oguzie","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Thang","family":"Nguyen-Tien","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lyudmyla V.","family":"Marushchak","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jessica","family":"Rodriguez","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Claudia M.","family":"Trujillo-Vargas","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ismaila","family":"Shittu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nga Thanh","family":"Pham","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sen Thi","family":"Le","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ajith","family":"Nagahawatte","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Phuong Thai","family":"Truong","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ruvini","family":"Kurukulasooriya","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Armstrong","family":"Obale","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Emily R.","family":"Robie","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Emily S.","family":"Bailey","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bradly P.","family":"Nicholson","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Christopher W.","family":"Woods","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gayani L.","family":"Tillekeratne","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4628-5908","authenticated-orcid":false,"given":"Gregory C.","family":"Gray","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.ijregi.2025.100757_bib0001","doi-asserted-by":"crossref","first-page":"637","DOI":"10.3390\/v13040637","article-title":"Mitigating future respiratory virus pandemics: new threats and approaches to consider","volume":"13","author":"Gray","year":"2021","journal-title":"Viruses"},{"key":"10.1016\/j.ijregi.2025.100757_bib0002","doi-asserted-by":"crossref","first-page":"990","DOI":"10.1038\/nature06536","article-title":"Global trends in emerging infectious diseases","volume":"451","author":"Jones","year":"2008","journal-title":"Nature"},{"key":"10.1016\/j.ijregi.2025.100757_bib0003","doi-asserted-by":"crossref","first-page":"1124","DOI":"10.1038\/s41467-017-00923-8","article-title":"Global hotspots and correlates of emerging zoonotic diseases","volume":"8","author":"Allen","year":"2017","journal-title":"Nat Commun"},{"key":"10.1016\/j.ijregi.2025.100757_bib0004","doi-asserted-by":"crossref","first-page":"ofab078","DOI":"10.1093\/ofid\/ofab078","article-title":"While we endure this pandemic, what new respiratory virus threats are we missing?","volume":"8","author":"Gray","year":"2021","journal-title":"Open Forum Infect Dis"},{"key":"10.1016\/j.ijregi.2025.100757_bib0005","doi-asserted-by":"crossref","first-page":"622","DOI":"10.1093\/cid\/ciz865","article-title":"High risk of influenza virus infection among swine workers: examining a dynamic cohort in china","volume":"71","author":"Borkenhagen","year":"2020","journal-title":"Clin Infect Dis"},{"key":"10.1016\/j.ijregi.2025.100757_bib0006","doi-asserted-by":"crossref","first-page":"ofae355","DOI":"10.1093\/ofid\/ofae355","article-title":"High prevalence of highly pathogenic avian influenza: A virus in Vietnam's live bird markets","volume":"11","author":"Dao","year":"2024","journal-title":"Open Forum Infect Dis"},{"key":"10.1016\/j.ijregi.2025.100757_bib0007","doi-asserted-by":"crossref","first-page":"331","DOI":"10.1093\/cid\/ciae576","article-title":"A one health investigation into H5N1 avian influenza virus epizootics on two dairy farms","volume":"80","author":"Shittu","year":"2025","journal-title":"Clin Infect Dis"},{"key":"10.1016\/j.ijregi.2025.100757_bib0008","article-title":"High prevalence of viral infections among hospitalized pneumonia patients in equatorial Sarawak","volume":"6","author":"Toh","year":"2019","journal-title":"Malaysia. Open Forum Infect Dis"},{"key":"10.1016\/j.ijregi.2025.100757_bib0009","doi-asserted-by":"crossref","first-page":"13","DOI":"10.1186\/s40794-020-00114-2","article-title":"Panspecies molecular assays detect viral pathogens missed by real-time PCR\/reverse-transcriptase PCR among pneumonia patients, Sarawak, Malaysia","volume":"6","author":"Fieldhouse","year":"2020","journal-title":"Trop Dis Travel Med Vaccines"},{"key":"10.1016\/j.ijregi.2025.100757_bib0010","series-title":"Manual for the laboratory diagnosis and virological surveillance of influenza. xii","year":"2011"},{"key":"10.1016\/j.ijregi.2025.100757_bib0011","doi-asserted-by":"crossref","first-page":"71","DOI":"10.1111\/irv.12613","article-title":"A newly developed tetraplex real-time RT-PCR for simultaneous screening of influenza virus types A, B, C and D","volume":"13","author":"Henritzi","year":"2019","journal-title":"Influ Other Respir Viruses"},{"key":"10.1016\/j.ijregi.2025.100757_bib0012","series-title":"WHO information for the molecular detection of influenza viruses","year":"2024"},{"key":"10.1016\/j.ijregi.2025.100757_bib0013","article-title":"An algorithm for the characterization of influenza A viruses from various host species and environments","volume":"18","author":"Pulscher","year":"2024","journal-title":"Influ Other Respir Viruses"},{"key":"10.1016\/j.ijregi.2025.100757_bib0014","doi-asserted-by":"crossref","DOI":"10.1016\/j.jcv.2020.104391","article-title":"A RT-PCR assay for the detection of coronaviruses from four genera","volume":"128","author":"Xiu","year":"2020","journal-title":"J Clin Virol"},{"key":"10.1016\/j.ijregi.2025.100757_bib0015","doi-asserted-by":"crossref","first-page":"446","DOI":"10.1093\/cid\/ciab456","article-title":"Novel canine coronavirus isolated from a hospitalized patient with pneumonia in East Malaysia","volume":"74","author":"Vlasova","year":"2022","journal-title":"Clin Infect Dis"},{"key":"10.1016\/j.ijregi.2025.100757_bib0016","doi-asserted-by":"crossref","first-page":"433","DOI":"10.3390\/v17030433","article-title":"Novel rodent coronavirus-like virus detected among beef cattle with respiratory disease in Mexico","volume":"17","author":"Shittu","year":"2025","journal-title":"Viruses"},{"key":"10.1016\/j.ijregi.2025.100757_bib0017","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0034961","article-title":"A family-wide RT-PCR assay for detection of paramyxoviruses and application to a large-scale surveillance study","volume":"7","author":"van Boheemen","year":"2012","journal-title":"PLoS One"},{"key":"10.1016\/j.ijregi.2025.100757_bib0018","doi-asserted-by":"crossref","first-page":"2652","DOI":"10.1128\/JCM.00192-08","article-title":"Sensitive and broadly reactive reverse transcription-PCR assays to detect novel paramyxoviruses","volume":"46","author":"Tong","year":"2008","journal-title":"J Clin Microbiol"},{"key":"10.1016\/j.ijregi.2025.100757_bib0019","series-title":"World Health Organization. Regional Office for Europe. Enterovirus Surveillance Guidelines: guidelines for enterovirus surveillance in support of the Polio Eradication Initiative","year":"2015"},{"key":"10.1016\/j.ijregi.2025.100757_bib0020","doi-asserted-by":"crossref","first-page":"13366","DOI":"10.1128\/JVI.78.23.13366-13369.2004","article-title":"Detection and analysis of six lizard adenoviruses by consensus primer PCR provides further evidence of a reptilian origin for the atadenoviruses","volume":"78","author":"Wellehan","year":"2004","journal-title":"J Virol"},{"key":"10.1016\/j.ijregi.2025.100757_bib0021","doi-asserted-by":"crossref","first-page":"772","DOI":"10.1093\/molbev\/mst010","article-title":"MAFFT multiple sequence alignment software version 7: improvements in performance and usability","volume":"30","author":"Katoh","year":"2013","journal-title":"Mol Biol Evol"},{"key":"10.1016\/j.ijregi.2025.100757_bib0022","doi-asserted-by":"crossref","first-page":"1530","DOI":"10.1093\/molbev\/msaa015","article-title":"IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era","volume":"37","author":"Minh","year":"2020","journal-title":"Mol Biol Evol"},{"key":"10.1016\/j.ijregi.2025.100757_bib0023","doi-asserted-by":"crossref","first-page":"558","DOI":"10.1128\/JVI.00837-12","article-title":"Characterizing the picornavirus landscape among synanthropic nonhuman primates in Bangladesh, 2007 to 2008","volume":"87","author":"Oberste","year":"2013","journal-title":"J Virol"},{"key":"10.1016\/j.ijregi.2025.100757_bib0024","doi-asserted-by":"crossref","first-page":"2175","DOI":"10.1128\/JCM.02270-10","article-title":"Application of TaqMan low-density arrays for simultaneous detection of multiple respiratory pathogens","volume":"49","author":"Kodani","year":"2011","journal-title":"J Clin Microbiol"},{"key":"10.1016\/j.ijregi.2025.100757_bib0025","doi-asserted-by":"crossref","first-page":"e1184","DOI":"10.1093\/cid\/ciab924","article-title":"Isolation of a novel recombinant canine coronavirus from a visitor to Haiti: further evidence of transmission of coronaviruses of zoonotic origin to humans","volume":"75","author":"Lednicky","year":"2022","journal-title":"Clin Infect Dis"},{"key":"10.1016\/j.ijregi.2025.100757_bib0026","doi-asserted-by":"crossref","first-page":"672","DOI":"10.4269\/ajtmh.18-0699","article-title":"Respiratory viral infection: an underappreciated cause of acute febrile illness admissions in Southern Sri Lanka","volume":"100","author":"Tillekeratne","year":"2019","journal-title":"Am J Trop Med Hyg"},{"key":"10.1016\/j.ijregi.2025.100757_bib0027","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0272415","article-title":"Clinical and epidemiological characteristics of influenza virus infection in hospitalized children with acute respiratory infections in Sri Lanka","volume":"17","author":"Rafeek","year":"2022","journal-title":"PLoS One"},{"key":"10.1016\/j.ijregi.2025.100757_bib0028","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0233117","article-title":"Virus detections among patients with severe acute respiratory illness, Northern Vietnam","volume":"15","author":"Le","year":"2020","journal-title":"PLoS One"},{"key":"10.1016\/j.ijregi.2025.100757_bib0029","doi-asserted-by":"crossref","first-page":"53","DOI":"10.1016\/j.diagmicrobio.2016.06.018","article-title":"Partial comparison of the NxTAG Respiratory Pathogen Panel Assay with the Luminex xTAG Respiratory Panel Fast Assay V2 and singleplex real-time polymerase chain reaction for detection of respiratory pathogens","volume":"86","author":"Esposito","year":"2016","journal-title":"Diagn Microbiol Infect Dis"}],"container-title":["IJID Regions"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2772707625001924?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2772707625001924?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,3,10]],"date-time":"2026-03-10T18:13:23Z","timestamp":1773166403000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S2772707625001924"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,12]]},"references-count":29,"alternative-id":["S2772707625001924"],"URL":"https:\/\/doi.org\/10.1016\/j.ijregi.2025.100757","relation":{},"ISSN":["2772-7076"],"issn-type":[{"value":"2772-7076","type":"print"}],"subject":[],"published":{"date-parts":[[2025,12]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Diverse respiratory viruses detected among hospitalized patients with pneumonia in Sri Lanka and Vietnam","name":"articletitle","label":"Article Title"},{"value":"IJID Regions","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.ijregi.2025.100757","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 The Author(s). Published by Elsevier Ltd on behalf of International Society for Infectious Diseases.","name":"copyright","label":"Copyright"}],"article-number":"100757"}}