{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,16]],"date-time":"2026-09-16T22:02:52Z","timestamp":1789596172672,"version":"build-2803163510"},"reference-count":73,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,9,3]],"date-time":"2026-09-03T00:00:00Z","timestamp":1788393600000},"content-version":"vor","delay-in-days":2,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100011798","name":"Ministry of Agriculture and Rural Affairs of the People's Republic of China","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100011798","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100012226","name":"Fundamental Research Funds for the Central Universities","doi-asserted-by":"publisher","award":["226-2025-00004"],"award-info":[{"award-number":["226-2025-00004"]}],"id":[{"id":"10.13039\/501100012226","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100013804","name":"Fundamental Research Funds for the Central Universities","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100013804","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Journal of Advanced Research"],"published-print":{"date-parts":[[2026,9]]},"DOI":"10.1016\/j.jare.2026.09.002","type":"journal-article","created":{"date-parts":[[2026,9,3]],"date-time":"2026-09-03T23:45:18Z","timestamp":1788479118000},"update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"title":["Mulberry-derived endophytic Bacillus velezensis suppresses gray mold and promotes mulberry growth via reshaping the root metabolism and microbiome"],"prefix":"10.1016","author":[{"given":"Lixue","family":"Wang","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yixuan","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wanting","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xinyi","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cheng","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yinxin","family":"Liu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zhenzhu","family":"Su","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yue","family":"Wang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chongde","family":"Sun","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lingxia","family":"Huang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.jare.2026.09.002_b0005","doi-asserted-by":"crossref","first-page":"100272","DOI":"10.1016\/j.foohum.2024.100272","article-title":"Mulberry: From nutraceuticals to bioactive phytochemicals","volume":"2","author":"Kumar","year":"2024","journal-title":"Food and Humanity"},{"key":"10.1016\/j.jare.2026.09.002_b0010","doi-asserted-by":"crossref","DOI":"10.1016\/j.foodcont.2022.108906","article-title":"Effect of cold atmospheric plasma on the gray mold rot of postharvest mulberry fruit","volume":"137","author":"Yinxin","year":"2022","journal-title":"Food Control"},{"issue":"4","key":"10.1016\/j.jare.2026.09.002_b0015","doi-asserted-by":"crossref","first-page":"414","DOI":"10.1111\/j.1364-3703.2011.00783.x","article-title":"The Top 10 fungal pathogens in molecular plant pathology","volume":"13","author":"Dean","year":"2012","journal-title":"Mol Plant Pathol"},{"key":"10.1016\/j.jare.2026.09.002_b0020","doi-asserted-by":"crossref","DOI":"10.1016\/j.plantsci.2025.112492","article-title":"The cell death-inducing protein BcPlp1 from Botrytis cinerea contributes to pathogenicity and modulates plant resistance","volume":"356","author":"Nie","year":"2025","journal-title":"Plant Sci"},{"issue":"1","key":"10.1016\/j.jare.2026.09.002_b0025","doi-asserted-by":"crossref","first-page":"100410","DOI":"10.1016\/j.emcon.2024.100410","article-title":"A comprehensive review on environmental and human health impacts of chemical pesticide usage","volume":"11","author":"Zhou","year":"2025","journal-title":"Emerging Contam"},{"key":"10.1016\/j.jare.2026.09.002_b0030","doi-asserted-by":"crossref","first-page":"106355","DOI":"10.1016\/j.fitote.2024.106355","article-title":"Endophytes as bioenhancers of plant growth: An overview","volume":"181","author":"Aishwarya","year":"2025","journal-title":"Fitoterapia"},{"key":"10.1016\/j.jare.2026.09.002_b0035","doi-asserted-by":"crossref","first-page":"36","DOI":"10.1016\/j.micres.2019.02.001","article-title":"Plant beneficial endophytic bacteria: Mechanisms, diversity, host range and genetic determinants","volume":"221","author":"Afzal","year":"2019","journal-title":"Microbiol Res"},{"key":"10.1016\/j.jare.2026.09.002_b0040","doi-asserted-by":"crossref","first-page":"128054","DOI":"10.1016\/j.micres.2025.128054","article-title":"Microbial diversity and interactions: Synergistic effects and potential applications of Pseudomonas and Bacillus consortia","volume":"293","author":"Wang","year":"2025","journal-title":"Microbiol Res"},{"key":"10.1016\/j.jare.2026.09.002_b0045","doi-asserted-by":"crossref","DOI":"10.1016\/j.rhisph.2023.100752","article-title":"Co-inoculation of Bacillus velezensis and Stenotrophomonas maltophilia strains improves growth and salinity tolerance in maize (Zea mays L.)","volume":"27","author":"Ercole","year":"2023","journal-title":"Rhizosphere"},{"key":"10.1016\/j.jare.2026.09.002_b0050","doi-asserted-by":"crossref","DOI":"10.1016\/j.biocontrol.2024.105507","article-title":"The rice endophytic bacterium Bacillus velezensis LS123N provides protection against multiple pathogens and enhances rice resistance to wind with increase in yield","volume":"192","author":"Tu","year":"2024","journal-title":"Biol Control"},{"key":"10.1016\/j.jare.2026.09.002_b0055","doi-asserted-by":"crossref","DOI":"10.1016\/j.cpb.2025.100440","article-title":"Antimicrobial metabolites of Bacillus velezensis FZB42 reshape rice rhizosphere microbial community composition and induce host resistance against Rhizoctonia solani","volume":"41","author":"Ali","year":"2025","journal-title":"Curr Plant Biol"},{"key":"10.1016\/j.jare.2026.09.002_b0060","first-page":"170","article-title":"The complete genome sequences of Bacillus velezensis B26: a promising biocontrol agent and biofertilizer. F1000","volume":"14","author":"Kamath","year":"2025","journal-title":"Research"},{"issue":"2","key":"10.1016\/j.jare.2026.09.002_b0065","doi-asserted-by":"crossref","DOI":"10.1111\/1758-2229.13250","article-title":"Bacillus velezensis SQR9 promotes plant growth through colonization and rhizosphere-phyllosphere bacteria interaction","volume":"16","author":"Yu","year":"2024","journal-title":"Environ Microbiol Rep"},{"key":"10.1016\/j.jare.2026.09.002_b0070","article-title":"metabolic architects of beneficial microbiome assembly","volume":"199(1):kiaf349","author":"Uribe-Acosta","year":"2025","journal-title":"Plant Physiol"},{"key":"10.1016\/j.jare.2026.09.002_b0075","doi-asserted-by":"crossref","first-page":"710741","DOI":"10.3389\/fmicb.2021.710741","article-title":"Characterization of a potent new-generation antimicrobial peptide of Bacillus","volume":"12","author":"Choyam","year":"2021","journal-title":"Front Microbiol"},{"issue":"7","key":"10.1016\/j.jare.2026.09.002_b0080","doi-asserted-by":"crossref","first-page":"1870","DOI":"10.1093\/molbev\/msw054","article-title":"MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets","volume":"33","author":"Kumar","year":"2016","journal-title":"Mol Biol Evol"},{"key":"10.1016\/j.jare.2026.09.002_b0085","doi-asserted-by":"crossref","first-page":"127745","DOI":"10.1016\/j.micres.2024.127745","article-title":"Identification and genomic insights into a strain of Bacillus velezensis with phytopathogen-inhibiting and plant growth-promoting properties","volume":"285","author":"Liang","year":"2024","journal-title":"Microbiol Res"},{"issue":"11","key":"10.1016\/j.jare.2026.09.002_b0090","doi-asserted-by":"crossref","first-page":"e112963","DOI":"10.1371\/journal.pone.0112963","article-title":"Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement","volume":"9","author":"Walker","year":"2014","journal-title":"PLoS One"},{"issue":"5","key":"10.1016\/j.jare.2026.09.002_b0095","doi-asserted-by":"crossref","first-page":"955","DOI":"10.1093\/nar\/25.5.955","article-title":"tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence","volume":"25","author":"Lowe","year":"1997","journal-title":"Nucleic Acids Res"},{"issue":"6","key":"10.1016\/j.jare.2026.09.002_b0100","doi-asserted-by":"crossref","first-page":"673","DOI":"10.1093\/bioinformatics\/btm009","article-title":"Identifying bacterial genes and endosymbiont DNA with Glimmer","volume":"23","author":"Delcher","year":"2007","journal-title":"Bioinformatics"},{"issue":"1","key":"10.1016\/j.jare.2026.09.002_b0105","doi-asserted-by":"crossref","first-page":"17009","DOI":"10.1038\/s41598-018-35300-y","article-title":"Comparative genomic and functional analyses of four sequenced Bacillus cereus genomes reveal conservation of genes relevant to plant-growth-promoting traits","volume":"8","author":"Zeng","year":"2018","journal-title":"Sci Rep"},{"key":"10.1016\/j.jare.2026.09.002_b0110","doi-asserted-by":"crossref","first-page":"9","DOI":"10.1016\/j.biocontrol.2017.06.010","article-title":"Pantoea agglomerans SWg2 colonizes mulberry tissues, promotes disease protection and seedling growth","volume":"113","author":"Xie","year":"2017","journal-title":"Biol Control"},{"issue":"6","key":"10.1016\/j.jare.2026.09.002_b0115","doi-asserted-by":"crossref","first-page":"601","DOI":"10.1111\/1751-7915.12145","article-title":"Colonization by endophytic Ochrobactrum anthropi\u2005Mn1 promotes growth of Jerusalem artichoke","volume":"7","author":"Meng","year":"2014","journal-title":"Microb Biotechnol"},{"issue":"1","key":"10.1016\/j.jare.2026.09.002_b0120","doi-asserted-by":"crossref","first-page":"242","DOI":"10.1111\/jam.14459","article-title":"Antimicrobial Bacillus velezensis HC6: production of three kinds of lipopeptides and biocontrol potential in maize","volume":"128","author":"Liu","year":"2020","journal-title":"J Appl Microbiol"},{"key":"10.1016\/j.jare.2026.09.002_b0125","doi-asserted-by":"crossref","first-page":"1012","DOI":"10.1111\/jph.12522","article-title":"Isolation and identification of Bacillus amyloliquefaciens IBFCBF\u20101 with potential for biological control of phytophthora blight and growth promotion of pepper","volume":"164","author":"Zhang","year":"2016","journal-title":"J Phytopathol"},{"issue":"1","key":"10.1016\/j.jare.2026.09.002_b0130","doi-asserted-by":"crossref","first-page":"152","DOI":"10.1186\/s12864-022-08392-0","article-title":"Biocontrol properties from phyllospheric bacteria isolated from Solanum lycopersicum and Lactuca sativa and genome mining of antimicrobial gene clusters","volume":"23","author":"Mu\u00f1oz","year":"2022","journal-title":"BMC Genomics"},{"key":"10.1016\/j.jare.2026.09.002_b0135","doi-asserted-by":"crossref","first-page":"67","DOI":"10.1016\/j.biocontrol.2014.07.012","article-title":"Inhibitory efficacy of endophytic Bacillus subtilis EDR4 against Sclerotinia sclerotiorum on rapeseed","volume":"78","author":"Chen","year":"2014","journal-title":"Biol Control"},{"issue":"16","key":"10.1016\/j.jare.2026.09.002_b0140","first-page":"e4740","article-title":"Quantification of Botrytis cinerea growth in Arabidopsis thaliana","volume":"13","author":"Scholz","year":"2023","journal-title":"Bio Protoc"},{"key":"10.1016\/j.jare.2026.09.002_b0145","series-title":"Mulberry: From botany to phytochemistry","first-page":"101","article-title":"Propagation of mulberry and production","author":"Ozturk","year":"2024"},{"key":"10.1016\/j.jare.2026.09.002_b0150","doi-asserted-by":"crossref","DOI":"10.3389\/fnut.2024.1484646","article-title":"Effect of probiotic supplementation combined with bismuth-containing quadruple therapy on gut microbiota during Helicobacter pylori eradication: a randomized, double-blind, placebo-controlled trial","volume":"11","author":"Han","year":"2024","journal-title":"Front Nutr"},{"issue":"17","key":"10.1016\/j.jare.2026.09.002_b0155","doi-asserted-by":"crossref","first-page":"884","DOI":"10.1093\/bioinformatics\/bty560","article-title":"Fastp: an ultra-fast all-in-one FASTQ preprocessor","volume":"34","author":"Chen","year":"2018","journal-title":"Bioinformatics"},{"issue":"21","key":"10.1016\/j.jare.2026.09.002_b0160","doi-asserted-by":"crossref","first-page":"2957","DOI":"10.1093\/bioinformatics\/btr507","article-title":"FLASH: fast length adjustment of short reads to improve genome assemblies","volume":"27","author":"Mago\u010d","year":"2011","journal-title":"Bioinformatics"},{"issue":"6","key":"10.1016\/j.jare.2026.09.002_b0165","doi-asserted-by":"crossref","first-page":"685","DOI":"10.1038\/s41587-020-0548-6","article-title":"PICRUSt2 for prediction of metagenome functions","volume":"38","author":"Douglas","year":"2020","journal-title":"Nat Biotechnol"},{"issue":"23","key":"10.1016\/j.jare.2026.09.002_b0170","doi-asserted-by":"crossref","first-page":"7537","DOI":"10.1128\/AEM.01541-09","article-title":"Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities","volume":"75","author":"Schloss","year":"2009","journal-title":"Appl Environ Microbiol"},{"issue":"6","key":"10.1016\/j.jare.2026.09.002_b0175","doi-asserted-by":"crossref","first-page":"60","DOI":"10.1186\/gb-2011-12-6-r60","article-title":"Metagenomic biomarker discovery and explanation","volume":"12","author":"Segata","year":"2011","journal-title":"Genome Biol"},{"key":"10.1016\/j.jare.2026.09.002_b0180","doi-asserted-by":"crossref","first-page":"29","DOI":"10.1016\/j.jare.2019.03.004","article-title":"A review on the plant microbiome: Ecology, functions, and emerging trends in microbial application","volume":"19","author":"Compant","year":"2019","journal-title":"J Adv Res"},{"issue":"1","key":"10.1016\/j.jare.2026.09.002_b0185","doi-asserted-by":"crossref","first-page":"104","DOI":"10.1186\/s40168-022-01295-y","article-title":"Phylogenies of the 16S rRNA gene and its hypervariable regions lack concordance with core genome phylogenies","volume":"10","author":"Hassler","year":"2022","journal-title":"Microbiome"},{"issue":"8","key":"10.1016\/j.jare.2026.09.002_b0190","doi-asserted-by":"crossref","first-page":"1846","DOI":"10.1099\/ijs.0.64685-0","article-title":"Comparison of gyrB gene sequences, 16S rRNA gene sequences and DNA-DNA hybridization in the Bacillus subtilis group","volume":"57","author":"Wang","year":"2007","journal-title":"Int J Syst Evol Microbiol"},{"key":"10.1016\/j.jare.2026.09.002_b0195","article-title":"Phylogenomic analysis substantiates the gyrB gene as a powerful molecular marker to efficiently differentiate the most closely related genera Myxococcus, Corallococcus, and Pyxidicoccus","volume":"12","author":"Liu","year":"2021","journal-title":"Front Microbiol"},{"issue":"1","key":"10.1016\/j.jare.2026.09.002_b0200","doi-asserted-by":"crossref","first-page":"82","DOI":"10.1186\/s40168-020-00857-2","article-title":"Earth microbial co-occurrence network reveals interconnection pattern across microbiomes","volume":"8","author":"Ma","year":"2020","journal-title":"Microbiome"},{"key":"10.1016\/j.jare.2026.09.002_b0205","doi-asserted-by":"crossref","DOI":"10.1016\/j.apsoil.2022.104395","article-title":"Network analysis reveals bacterial and fungal keystone taxa involved in straw and soil organic matter mineralization","volume":"173","author":"Xiao","year":"2022","journal-title":"Appl Soil Ecol"},{"key":"10.1016\/j.jare.2026.09.002_b0210","doi-asserted-by":"crossref","unstructured":"Shin GY, Smith A, Coutinho TA, Dutta B, Kvitko BH. Validation of species-specific PCR assays for the detection of Pantoea ananatis, P. agglomerans, P. allii, and P. stewartii. Plant Dis 2022;106(10):2563-70.","DOI":"10.1094\/PDIS-08-21-1810-SC"},{"key":"10.1016\/j.jare.2026.09.002_b0215","article-title":"Effect of blister blight disease caused by Exobasidium on tea quality","volume":"21","author":"Han","year":"2024","journal-title":"Food Chem: X"},{"issue":"3","key":"10.1016\/j.jare.2026.09.002_b0220","doi-asserted-by":"crossref","first-page":"321","DOI":"10.1007\/s13313-025-01049-y","article-title":"Phylogenetic reassessment and epitypification of Exobasidium vexans causing blister blight of tea","volume":"54","author":"Sinniah","year":"2025","journal-title":"Australas Plant Pathol"},{"issue":"1","key":"10.1016\/j.jare.2026.09.002_b0225","doi-asserted-by":"crossref","first-page":"7398","DOI":"10.1038\/s41467-023-43177-3","article-title":"Streptomyces alleviate abiotic stress in plant by producing pteridic acids","volume":"14","author":"Yang","year":"2023","journal-title":"Nat Commun"},{"issue":"1","key":"10.1016\/j.jare.2026.09.002_b0230","first-page":"1254","article-title":"Two rice cultivars recruit different rhizospheric bacteria to promote aboveground regrowth after mechanical defoliation","volume":"13","author":"Jiang","year":"2024","journal-title":"Microbiol Spectr"},{"issue":"3","key":"10.1016\/j.jare.2026.09.002_b0235","doi-asserted-by":"crossref","first-page":"251","DOI":"10.5423\/PPJ.RW.01.2024.0019","article-title":"The plant-associated Flavobacterium: A hidden helper for improving plant health","volume":"40","author":"Seo","year":"2024","journal-title":"Plant Pathol J"},{"key":"10.1016\/j.jare.2026.09.002_b0240","article-title":"Rhizobia as a source of plant growth-promoting molecules: Potential applications and possible operational mechanisms","volume":"4","author":"Jaiswal","year":"2021","journal-title":"Front Sustainable Food Syst"},{"issue":"11","key":"10.1016\/j.jare.2026.09.002_b0245","doi-asserted-by":"crossref","first-page":"1557","DOI":"10.1007\/s00299-018-2328-z","article-title":"Salt stress alleviation in citrus plants by plant growth-promoting rhizobacteria Pseudomonas putida and Novosphingobium sp","volume":"37","author":"Vives-Peris","year":"2018","journal-title":"Plant Cell Rep"},{"issue":"3","key":"10.1016\/j.jare.2026.09.002_b0250","doi-asserted-by":"crossref","first-page":"1652","DOI":"10.3390\/ijms25031652","article-title":"The genus Cladosporium: A prospective producer of natural products","volume":"25","author":"Li","year":"2024","journal-title":"Int J Mol Sci"},{"key":"10.1016\/j.jare.2026.09.002_b0255","article-title":"Nematode-trapping fungus Arthrobotrys oligospora recruited rhizosphere microorganisms to cooperate in controlling root-knot nematodes in tomato","volume":"135(9):lxae218-30","author":"Shen","year":"2024","journal-title":"J Appl Microbiol"},{"key":"10.1016\/j.jare.2026.09.002_b0260","doi-asserted-by":"crossref","DOI":"10.1016\/j.rhisph.2022.100538","article-title":"Maize-associated Meyerozyma from the Brazilian semiarid region are effective plant growth-promoting yeasts","volume":"22","author":"de Lima Targino","year":"2022","journal-title":"Rhizosphere"},{"key":"10.1016\/j.jare.2026.09.002_b0265","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2024.1485197","article-title":"Harnessing Pseudomonas spp. for sustainable plant crop protection","volume":"15","author":"Alattas","year":"2024","journal-title":"Front Microbiol"},{"issue":"3","key":"10.1016\/j.jare.2026.09.002_b0270","doi-asserted-by":"crossref","DOI":"10.1016\/j.syapm.2021.126202","article-title":"Comparative genomic analysis of the genus Novosphingobium and the description of two novel species Novosphingobium aerophilum sp. nov. and Novosphingobium jiangmenense sp. nov","volume":"44","author":"Liu","year":"2021","journal-title":"Syst Appl Microbiol"},{"key":"10.1016\/j.jare.2026.09.002_b0275","doi-asserted-by":"crossref","first-page":"1433716","DOI":"10.3389\/fmicb.2024.1433716","article-title":"Biocontrol of plant parasitic nematodes by bacteria and fungi: a multi-omics approach for the exploration of novel nematicides in sustainable agriculture","volume":"15","author":"Ayaz","year":"2024","journal-title":"Front Microbiol"},{"issue":"11","key":"10.1016\/j.jare.2026.09.002_b0280","doi-asserted-by":"crossref","DOI":"10.3390\/microorganisms10112143","article-title":"Biocontrol ability and action mechanism of Meyerozyma guilliermondii 37 on soft rot control of postharvest Kiwifruit","volume":"10","author":"Pan","year":"2022","journal-title":"Microorganisms"},{"key":"10.1016\/j.jare.2026.09.002_b0285","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2023.1287582","article-title":"A novel endophytic fungus strain of Cladosporium: its identification, genomic analysis, and effects on plant growth","volume":"14","author":"Yang","year":"2023","journal-title":"Front Microbiol"},{"issue":"6","key":"10.1016\/j.jare.2026.09.002_b0290","first-page":"436","article-title":"Heterologous production of bioactive xenoacremone analogs in Aspergillus nidulans","volume":"21","author":"Liu","year":"2023","journal-title":"Chin J Nat Med"},{"key":"10.1016\/j.jare.2026.09.002_b0295","doi-asserted-by":"crossref","first-page":"101212","DOI":"10.1016\/j.rhisph.2025.101212","article-title":"Root exudates as molecular architects shaping the rhizobacterial community: A review","volume":"36","author":"Shafi","year":"2025","journal-title":"Rhizosphere"},{"issue":"3","key":"10.1016\/j.jare.2026.09.002_b0300","doi-asserted-by":"crossref","first-page":"2457","DOI":"10.1093\/plphys\/kiad197","article-title":"The trans-zeatin-type side-chain modification of cytokinins controls rice growth","volume":"192","author":"Kiba","year":"2023","journal-title":"Plant Physiol"},{"key":"10.1016\/j.jare.2026.09.002_b0305","doi-asserted-by":"crossref","first-page":"1180576","DOI":"10.3389\/fpls.2023.1180576","article-title":"How does the pattern of root metabolites regulating beneficial microorganisms change with different grazing pressures?","volume":"14","author":"Yuan","year":"2023","journal-title":"Front Plant Sci"},{"key":"10.1016\/j.jare.2026.09.002_b0310","doi-asserted-by":"crossref","first-page":"1424825","DOI":"10.3389\/fmicb.2024.1424825","article-title":"Microbes as carbendazim degraders: opportunity and challenge","volume":"15","author":"Zhou","year":"2024","journal-title":"Front Microbiol"},{"key":"10.1016\/j.jare.2026.09.002_b0315","doi-asserted-by":"crossref","first-page":"124561","DOI":"10.1016\/j.envpol.2024.124561","article-title":"Soil microbial communities and degradation of pesticides in greenhouse effluent through a woodchip bioreactor","volume":"359","author":"Ewere","year":"2024","journal-title":"Environ Pollut"},{"key":"10.1016\/j.jare.2026.09.002_b0320","volume":"364","author":"Huang","year":"2019"},{"issue":"4","key":"10.1016\/j.jare.2026.09.002_b0325","doi-asserted-by":"crossref","first-page":"470","DOI":"10.1038\/s41564-018-0129-3","article-title":"Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly","volume":"3","author":"Zhalnina","year":"2018","journal-title":"Nat Microbiol"},{"issue":"7","key":"10.1016\/j.jare.2026.09.002_b0330","doi-asserted-by":"crossref","first-page":"2080","DOI":"10.1016\/j.funbio.2024.08.006","article-title":"Fungal membrane determinants affecting sensitivity to antifungal cyclic lipopeptides from Bacillus spp","volume":"128","author":"Bakker","year":"2024","journal-title":"Fungal Biol"},{"key":"10.1016\/j.jare.2026.09.002_b0335","doi-asserted-by":"crossref","DOI":"10.1016\/j.stress.2023.100334","article-title":"Microbes mediated induced systemic response in plants: A review","volume":"11","author":"Kour","year":"2024","journal-title":"Plant Stress"},{"issue":"5","key":"10.1016\/j.jare.2026.09.002_b0340","doi-asserted-by":"crossref","first-page":"361","DOI":"10.3390\/antiox9050361","article-title":"Oxidative stress-generating antimicrobials, a novel strategy to overcome antibacterial resistance","volume":"9","author":"Mourenza","year":"2020","journal-title":"Antioxidants (Basel)"},{"issue":"1","key":"10.1016\/j.jare.2026.09.002_b0345","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1093\/aob\/mcl236","article-title":"Ascorbate as a biosynthetic precursor in plants","volume":"99","author":"Debolt","year":"2007","journal-title":"Ann Bot"},{"issue":"5","key":"10.1016\/j.jare.2026.09.002_b0350","doi-asserted-by":"crossref","DOI":"10.3390\/metabo10050210","article-title":"Metabolic profiling of PGPR-treated tomato plants reveal priming-related adaptations of secondary metabolites and aromatic amino acids","volume":"10","author":"Mhlongo","year":"2020","journal-title":"Metabolites"},{"key":"10.1016\/j.jare.2026.09.002_b0355","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2024.1419547","article-title":"Evaluating the efficacy of microbial antagonists in inducing resistance, promoting growth, and providing biological control against powdery mildew in wheat","volume":"15","author":"Choudaker","year":"2024","journal-title":"Front Microbiol"},{"issue":"9","key":"10.1016\/j.jare.2026.09.002_b0360","doi-asserted-by":"crossref","first-page":"1007","DOI":"10.1038\/nbt1325","article-title":"Comparative analysis of the complete genome sequence of the plant growth\u2013promoting bacterium Bacillus amyloliquefaciens FZB42","volume":"25","author":"Chen","year":"2007","journal-title":"Nat Biotechnol"},{"key":"10.1016\/j.jare.2026.09.002_b0365","doi-asserted-by":"crossref","unstructured":"Borriss R. Use of plant-associated Bacillus strains as biofertilizers and biocontrol agents in agriculture. In: Maheshwari DK, editor. Bacteria in agrobiology: plant growth responses. Berlin, Heidelberg: Springer Berlin Heidelberg; 2011. p. 41-76.","DOI":"10.1007\/978-3-642-20332-9_3"}],"container-title":["Journal of Advanced Research"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2090123226007010?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2090123226007010?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,9,16]],"date-time":"2026-09-16T21:10:53Z","timestamp":1789593053000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S2090123226007010"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,9]]},"references-count":73,"alternative-id":["S2090123226007010"],"URL":"https:\/\/doi.org\/10.1016\/j.jare.2026.09.002","relation":{},"ISSN":["2090-1232"],"issn-type":[{"value":"2090-1232","type":"print"}],"subject":[],"published":{"date-parts":[[2026,9]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Mulberry-derived endophytic Bacillus velezensis suppresses gray mold and promotes mulberry growth via reshaping the root metabolism and microbiome","name":"articletitle","label":"Article Title"},{"value":"Journal of Advanced Research","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.jare.2026.09.002","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 The Authors. Published by Elsevier B.V. on behalf of Cairo University.","name":"copyright","label":"Copyright"}]}}