{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,6]],"date-time":"2026-10-06T07:06:43Z","timestamp":1791270403503,"version":"4.1.0"},"reference-count":56,"publisher":"Elsevier BV","issue":"2","license":[{"start":{"date-parts":[[2013,8,1]],"date-time":"2013-08-01T00:00:00Z","timestamp":1375315200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Journal of Biotechnology"],"published-print":{"date-parts":[[2013,8]]},"DOI":"10.1016\/j.jbiotec.2012.11.003","type":"journal-article","created":{"date-parts":[[2012,11,29]],"date-time":"2012-11-29T06:15:56Z","timestamp":1354169756000},"page":"135-141","source":"Crossref","is-referenced-by-count":38,"title":["Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production"],"prefix":"10.1016","volume":"167","author":[{"given":"Siomar C.","family":"Soares","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Eva","family":"Trost","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rommel T.J.","family":"Ramos","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Adriana R.","family":"Carneiro","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Anderson R.","family":"Santos","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Anne C.","family":"Pinto","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Eudes","family":"Barbosa","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fl\u00e1via","family":"Aburjaile","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Amjad","family":"Ali","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Carlos A.A.","family":"Diniz","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Syed S.","family":"Hassan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Karina","family":"Fiaux","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Luis C.","family":"Guimar\u00e3es","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Syeda M.","family":"Bakhtiar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ulisses","family":"Pereira","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sintia S.","family":"Almeida","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vin\u00edcius A.C.","family":"Abreu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fl\u00e1via S.","family":"Rocha","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fernanda A.","family":"Dorella","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Anderson","family":"Miyoshi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Artur","family":"Silva","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vasco","family":"Azevedo","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andreas","family":"Tauch","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.jbiotec.2012.11.003_bib0005","doi-asserted-by":"crossref","first-page":"804","DOI":"10.2460\/javma.1996.209.04.804","article-title":"Corynebacterium pseudotuberculosis infection in horses: 538 cases (1982\u20131993)","volume":"209","author":"Aleman","year":"1996","journal-title":"Journal of the American Veterinary Medical Association"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0010","doi-asserted-by":"crossref","first-page":"402","DOI":"10.1186\/1471-2164-12-402","article-title":"BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons","volume":"12","author":"Alikhan","year":"2011","journal-title":"BMC Genomics"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0015","doi-asserted-by":"crossref","first-page":"2638","DOI":"10.1128\/JB.01784-08","article-title":"HtaA is an iron-regulated hemin binding protein involved in the utilization of heme iron in Corynebacterium diphtheriae","volume":"191","author":"Allen","year":"2009","journal-title":"Journal of Bacteriology"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0020","doi-asserted-by":"crossref","first-page":"4977","DOI":"10.1128\/IAI.00613-10","article-title":"Overcoming the heme paradox: heme toxicity and tolerance in bacterial pathogens","volume":"78","author":"Anzaldi","year":"2010","journal-title":"Infection and Immunity"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0025","doi-asserted-by":"crossref","first-page":"67","DOI":"10.1016\/S0167-5877(03)00060-6","article-title":"Prevalence of and carcass condemnation from maedi-visna, paratuberculosis and caseous lymphadenitis in culled sheep from Quebec, Canada","volume":"59","author":"Arsenault","year":"2003","journal-title":"Preventive Veterinary Medicine"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0030","doi-asserted-by":"crossref","first-page":"713","DOI":"10.2460\/ajvr.1986.47.04.713","article-title":"Survival of Corynebacterium pseudotuberculosis in axenic purulent exudate on common barnyard fomites","volume":"47","author":"Augustine","year":"1986","journal-title":"American Journal of Veterinary Research"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0035","doi-asserted-by":"crossref","first-page":"151","DOI":"10.20506\/rst.3.1.147","article-title":"Two serotypes of Corynebacterium pseudotuberculosis isolated from different animal species","volume":"3","author":"Barakat","year":"1984","journal-title":"Revue Scientifique et Technique de l\u2019OIE"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0040","doi-asserted-by":"crossref","first-page":"73","DOI":"10.1111\/j.1747-0285.2011.01118.x","article-title":"A novel comparative genomics analysis for common drug and vaccine targets in Corynebacterium pseudotuberculosis and other CMN group of human pathogens","volume":"78","author":"Barh","year":"2011","journal-title":"Chemical Biology & Drug Design"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0045","doi-asserted-by":"crossref","first-page":"61","DOI":"10.1002\/pmic.200800195","article-title":"Prediction of surface exposed proteins in Streptococcus pyogenes, with a potential application to other Gram-positive bacteria","volume":"9","author":"Barinov","year":"2009","journal-title":"Proteomics"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0050","doi-asserted-by":"crossref","first-page":"691","DOI":"10.1136\/vr.89.26.691","article-title":"Two biotypes of Corynebacterium pseudotuberculosis","volume":"89","author":"Biberstein","year":"1971","journal-title":"Veterinary Record"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0055","doi-asserted-by":"crossref","first-page":"146","DOI":"10.1186\/1471-2334-7-146","article-title":"The role of resuscitation promoting factors in pathogenesis and reactivation of Mycobacterium tuberculosis during intra-peritoneal infection in mice","volume":"7","author":"Biketov","year":"2007","journal-title":"BMC Infectious Diseases"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0060","doi-asserted-by":"crossref","first-page":"200","DOI":"10.2460\/ajvr.1990.51.02.200","article-title":"Effect of muramyl dipeptide on immunogenicity of Corynebacterium pseudotuberculosis whole-cell vaccines in mice and lambs","volume":"51","author":"Brogden","year":"1990","journal-title":"American Journal of Veterinary Research"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0065","doi-asserted-by":"crossref","first-page":"3422","DOI":"10.1093\/bioinformatics\/bti553","article-title":"ACT: the Artemis comparison tool","volume":"16","author":"Carver","year":"2005","journal-title":"Bioinformatics"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0070","doi-asserted-by":"crossref","first-page":"218","DOI":"10.1016\/j.mimet.2011.05.008","article-title":"Rapid hybrid de novo assembly of a microbial genome using only short reads: Corynebacterium pseudotuberculosis I19 as a case study","volume":"86","author":"Cerdeira","year":"2011","journal-title":"Journal of Microbiological Methods"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0075","doi-asserted-by":"crossref","first-page":"7025","DOI":"10.1128\/JB.06293-11","article-title":"Complete genome sequence of Corynebacterium pseudotuberculosis strain CIP 52.97, isolated from a horse in Kenya","volume":"193","author":"Cerdeira","year":"2011","journal-title":"Journal of Bacteriology"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0080","doi-asserted-by":"crossref","first-page":"287","DOI":"10.1038\/74048","article-title":"The structure of the ferric siderophore binding protein FhuD complexed with gallichrome","volume":"7","author":"Clarke","year":"2000","journal-title":"Natural Structural Biology"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0085","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1111\/j.1574-6968.1996.tb08017.x","article-title":"Nitrate reduction to ammonia by enteric bacteria: redundancy, or a strategy for survival during oxygen starvation?","volume":"136","author":"Cole","year":"1996","journal-title":"FEMS Microbiology Letters"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0090","doi-asserted-by":"crossref","first-page":"4560","DOI":"10.1021\/ic070107o","article-title":"Conserved mechanism of copper binding and transfer. A comparison of the copper-resistance proteins PcoC from Escherichia coli and CopC from Pseudomonas syringae","volume":"46","author":"Djoko","year":"2007","journal-title":"Inorganic Chemistry"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0095","doi-asserted-by":"crossref","first-page":"205","DOI":"10.1586\/14760584.8.2.205","article-title":"Antigens of Corynebacterium pseudotuberculosis and prospects for vaccine development","volume":"8","author":"Dorella","year":"2009","journal-title":"Expert Review of Vaccines"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0100","doi-asserted-by":"crossref","first-page":"201","DOI":"10.1051\/vetres:2005056","article-title":"Corynebacterium pseudotuberculosis: microbiology, biochemical properties, pathogenesis and molecular studies of virulence","volume":"37","author":"Dorella","year":"2006","journal-title":"Veterinary Research"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0105","doi-asserted-by":"crossref","first-page":"e1000680","DOI":"10.1371\/journal.ppat.1000680","article-title":"Investigation of the genes involved in antigenic switching at the vlsE locus in Borrelia burgdorferi: an essential role for the RuvAB branch migrase","volume":"5","author":"Dresser","year":"2009","journal-title":"PLoS Pathogens"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0110","doi-asserted-by":"crossref","first-page":"317","DOI":"10.1111\/j.1751-0813.1991.tb03085.x","article-title":"Immunisation against ovine caseous lymphadenitis: comparison of Corynebacterium pseudotuberculosis vaccines with and without bacterial cells","volume":"68","author":"Eggleton","year":"1991","journal-title":"Australian Veterinary Journal"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0115","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1016\/0165-2427(91)90121-R","article-title":"Antigen specificity of antibody responses to Corynebacterium pseudotuberculosis in naturally infected sheep with caseous lymphadenitis","volume":"28","author":"Ellis","year":"1991","journal-title":"Veterinary Immunology and Immunopathology"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0120","doi-asserted-by":"crossref","first-page":"148","DOI":"10.1128\/AAC.18.1.148","article-title":"Penicillin-binding proteins in bacteria","volume":"18","author":"Georgopapadakou","year":"1980","journal-title":"Antimicrobial Agents and Chemotherapy"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0125","doi-asserted-by":"crossref","first-page":"309","DOI":"10.1016\/j.tim.2008.04.006","article-title":"Physiological functions of d-alanine carboxypeptidases in Escherichia coli","volume":"16","author":"Ghosh","year":"2008","journal-title":"Trends in Microbiology"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0130","doi-asserted-by":"crossref","first-page":"297505","DOI":"10.1155\/2010\/297505","article-title":"Vaxign: the first web-based vaccine design program for reverse vaccinology and applications for vaccine development","volume":"2010","author":"He","year":"2010","journal-title":"Journal of Biomedicine and Biotechnology"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0135","doi-asserted-by":"crossref","first-page":"802","DOI":"10.1101\/gr.072033.107","article-title":"De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer","volume":"18","author":"Hernandez","year":"2008","journal-title":"Genome Research"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0140","doi-asserted-by":"crossref","first-page":"802","DOI":"10.1016\/S0264-410X(98)00264-3","article-title":"Efficacy of an ovine caseous lymphadenitis vaccine formulated using a genetically inactive form of the Corynebacterium pseudotuberculosis phospholipase D","volume":"17","author":"Hodgson","year":"1999","journal-title":"Vaccine"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0145","doi-asserted-by":"crossref","first-page":"285","DOI":"10.1186\/BF03548033","article-title":"Corynebacterium pseudotuberculosis infection in goats. IX. The effect of vaccination against natural infection","volume":"30","author":"Holstad","year":"1989","journal-title":"Acta Veterinaria Scandinavica"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0150","series-title":"Irregular, Nonsporing Gram-positive Rods, Section 15. Pages 1261\u20131579 in Bergey's Manual of Systematic Bacteriology","author":"Jones","year":"1986"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0155","doi-asserted-by":"crossref","first-page":"3100","DOI":"10.1093\/nar\/gkm160","article-title":"RNAmmer: consistent and rapid annotation of ribosomal RNA genes","volume":"35","author":"Lagesen","year":"2007","journal-title":"Nucleic Acids Research"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0160","doi-asserted-by":"crossref","first-page":"869","DOI":"10.2460\/ajvr.1987.48.05.869","article-title":"Efficacy of Corynebacterium pseudotuberculosis bacterin for the immunologic protection of sheep against development of caseous lymphadenitis","volume":"48","author":"LeaMaster","year":"1987","journal-title":"American Journal of Veterinary Research"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0165","doi-asserted-by":"crossref","first-page":"955","DOI":"10.1093\/nar\/25.5.0955","article-title":"tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence","volume":"25","author":"Lowe","year":"1997","journal-title":"Nucleic Acids Research"},{"issue":"1","key":"10.1016\/j.jbiotec.2012.11.003_bib0170","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1590\/S0036-46651993000100003","article-title":"Host cell adhesion to Schistosoma mansoni larvae in the peritoneal cavity of naive mice. Histological and scanning electron microscopic studies","volume":"35","author":"Melo","year":"1993","journal-title":"Revista do Instituto de Medicina Tropical de S\u00e3o Paulo"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0175","doi-asserted-by":"crossref","first-page":"91","DOI":"10.1111\/j.1751-0813.2003.tb11443.x","article-title":"Prevalence of caseous lymphadenitis and usage of caseous lymphadenitis vaccines in sheep flocks","volume":"81","author":"Paton","year":"2003","journal-title":"Australian Veterinary Journal"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0180","doi-asserted-by":"crossref","first-page":"441","DOI":"10.2460\/javma.2005.227.441","article-title":"Evaluation of clinical characteristics, diagnostic test results, and outcome in horses with internal infection caused by Corynebacterium pseudotuberculosis: 30 cases (1995\u20132003)","volume":"227","author":"Pratt","year":"2005","journal-title":"Journal of the American Veterinary Medical Association"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0185","doi-asserted-by":"crossref","first-page":"1292","DOI":"10.1016\/S0969-2126(02)00863-8","article-title":"The ABCDs of periplasmic copper trafficking","volume":"10","author":"Puig","year":"2002","journal-title":"Structure"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0190","doi-asserted-by":"crossref","first-page":"130","DOI":"10.1186\/1756-0500-4-130","article-title":"Analysis of quality raw data of second generation sequencers with Quality Assessment software","volume":"4","author":"Ramos","year":"2011","journal-title":"BMC Research Notes"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0195","doi-asserted-by":"crossref","first-page":"2688","DOI":"10.1016\/S0264-410X(00)00554-5","article-title":"Reverse vaccinology, a genome-based approach to vaccine development","volume":"19","author":"Rappuoli","year":"2001","journal-title":"Vaccine"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0200","doi-asserted-by":"crossref","first-page":"86","DOI":"10.1016\/j.micinf.2011.08.011","article-title":"Potential of Mycobacterium tuberculosis resuscitation-promoting factors as antigens in novel tuberculosis sub-unit vaccines","volume":"14","author":"Romano","year":"2012","journal-title":"Microbes and Infection"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0205","doi-asserted-by":"crossref","first-page":"e18551","DOI":"10.1371\/journal.pone.0018551","article-title":"Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains","volume":"6","author":"Ruiz","year":"2011","journal-title":"PLoS ONE"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0210","doi-asserted-by":"crossref","first-page":"944","DOI":"10.1093\/bioinformatics\/16.10.944","article-title":"Artemis: sequence visualization and annotation","volume":"16","author":"Rutherford","year":"2000","journal-title":"Bioinformatics"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0215","doi-asserted-by":"crossref","first-page":"6064","DOI":"10.1021\/cr200296t","article-title":"Phospholipase D: enzymology, functionality, and chemical modulation","volume":"111","author":"Selvy","year":"2011","journal-title":"Chemical Reviews"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0220","doi-asserted-by":"crossref","first-page":"2610","DOI":"10.1128\/JB.01539-06","article-title":"MalE of group A Streptococcus participates in the rapid transport of maltotriose and longer maltodextrins","volume":"189","author":"Shelburne","year":"2007","journal-title":"Journal of Bacteriology"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0225","doi-asserted-by":"crossref","first-page":"e30848","DOI":"10.1371\/journal.pone.0030848","article-title":"PIPS: pathogenicity island prediction software","volume":"7","author":"Soares","year":"2012","journal-title":"PLoS ONE"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0230","doi-asserted-by":"crossref","first-page":"604","DOI":"10.1136\/vr.145.21.604","article-title":"Ulcerative lymphangitis and coronet lesions in an Israeli dairy herd infected with Corynebacterium pseudotuberculosis","volume":"145","author":"Steinman","year":"1999","journal-title":"Veterinary Record"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0235","doi-asserted-by":"crossref","first-page":"383","DOI":"10.1186\/1471-2164-12-383","article-title":"Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors","volume":"12","author":"Trost","year":"2011","journal-title":"BMC Genomics"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0240","doi-asserted-by":"crossref","first-page":"728","DOI":"10.1186\/1471-2164-11-728","article-title":"The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence","volume":"11","author":"Trost","year":"2010","journal-title":"BMC Genomics"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0245","doi-asserted-by":"crossref","first-page":"R41","DOI":"10.1186\/gb-2010-11-4-r41","article-title":"Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps","volume":"11","author":"Tsai","year":"2010","journal-title":"Genome Biology"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0250","doi-asserted-by":"crossref","first-page":"2985","DOI":"10.1128\/IAI.74.5.2985-2995.2006","article-title":"Deletion of the Mycobacterium tuberculosis resuscitation-promoting factor Rv1009 gene results in delayed reactivation from chronic tuberculosis","volume":"74","author":"Tufariello","year":"2006","journal-title":"Infection and Immunity"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0255","doi-asserted-by":"crossref","first-page":"359","DOI":"10.1016\/S0749-0720(15)30033-5","article-title":"Caseous lymphadenitis in small ruminants","volume":"17","author":"Williamson","year":"2001","journal-title":"Veterinary Clinics of North America: Food Animal Practice"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0260","doi-asserted-by":"crossref","first-page":"193","DOI":"10.1016\/j.cvfa.2010.10.019","article-title":"Control of caseous lymphadenitis","volume":"27","author":"Windsor","year":"2011","journal-title":"Veterinary Clinics of North America: Food Animal Practice"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0265","doi-asserted-by":"crossref","first-page":"947","DOI":"10.1017\/S095026880300894X","article-title":"Corynebacterium pseudotuberculosis infection in Israeli dairy cattle","volume":"131","author":"Yeruham","year":"2003","journal-title":"Epidemiology and Infection"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0270","doi-asserted-by":"crossref","first-page":"315","DOI":"10.1111\/j.1365-3164.2004.00388.x","article-title":"A herd level analysis of a Corynebacterium pseudotuberculosis outbreak in a dairy cattle herd","volume":"15","author":"Yeruham","year":"2004","journal-title":"Veterinary Dermatology"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0275","doi-asserted-by":"crossref","first-page":"847","DOI":"10.1093\/bioinformatics\/17.9.847","article-title":"InterProScan \u2013 an integration platform for the signature-recognition methods in InterPro","volume":"17","author":"Zdobnov","year":"2001","journal-title":"Bioinformatics"},{"key":"10.1016\/j.jbiotec.2012.11.003_bib0280","doi-asserted-by":"crossref","first-page":"821","DOI":"10.1101\/gr.074492.107","article-title":"Velvet: algorithms for de novo short read assembly using de Bruijn graphs","volume":"18","author":"Zerbino","year":"2008","journal-title":"Genome Research"}],"container-title":["Journal of Biotechnology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0168165612007080?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0168165612007080?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,4,22]],"date-time":"2025-04-22T22:42:07Z","timestamp":1745361727000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0168165612007080"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013,8]]},"references-count":56,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2013,8]]}},"alternative-id":["S0168165612007080"],"URL":"https:\/\/doi.org\/10.1016\/j.jbiotec.2012.11.003","relation":{},"ISSN":["0168-1656"],"issn-type":[{"value":"0168-1656","type":"print"}],"subject":[],"published":{"date-parts":[[2013,8]]}}}