{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,30]],"date-time":"2026-10-30T09:18:18Z","timestamp":1793351898358,"version":"4.5.0"},"reference-count":32,"publisher":"Elsevier BV","issue":"6","license":[{"start":{"date-parts":[[2023,11,1]],"date-time":"2023-11-01T00:00:00Z","timestamp":1698796800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2023,11,1]],"date-time":"2023-11-01T00:00:00Z","timestamp":1698796800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T00:00:00Z","timestamp":1761955200000},"content-version":"vor","delay-in-days":731,"URL":"http:\/\/www.elsevier.com\/open-access\/userlicense\/1.0\/"}],"funder":[{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["HL116211"],"award-info":[{"award-number":["HL116211"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100015015","name":"Government of South Australia","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100015015","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000016","name":"U.S. Department of Health and Human Services","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000016","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000897","name":"Cystic Fibrosis Foundation","doi-asserted-by":"publisher","award":["DESCHA16D0"],"award-info":[{"award-number":["DESCHA16D0"]}],"id":[{"id":"10.13039\/100000897","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000897","name":"Cystic Fibrosis Foundation","doi-asserted-by":"publisher","award":["DESCHA18K0"],"award-info":[{"award-number":["DESCHA18K0"]}],"id":[{"id":"10.13039\/100000897","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000897","name":"Cystic Fibrosis Foundation","doi-asserted-by":"publisher","award":["DESCHA15D0"],"award-info":[{"award-number":["DESCHA15D0"]}],"id":[{"id":"10.13039\/100000897","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100000925","name":"National Health and Medical Research Council","doi-asserted-by":"publisher","award":["1043768"],"award-info":[{"award-number":["1043768"]}],"id":[{"id":"10.13039\/501100000925","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["clinicalkey.com","clinicalkey.com.au","clinicalkey.es","clinicalkey.fr","clinicalkey.jp","cysticfibrosisjournal.com","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Journal of Cystic Fibrosis"],"published-print":{"date-parts":[[2023,11]]},"DOI":"10.1016\/j.jcf.2023.08.001","type":"journal-article","created":{"date-parts":[[2023,8,17]],"date-time":"2023-08-17T16:12:46Z","timestamp":1692288766000},"page":"1010-1016","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":8,"title":["The association between gut microbiome and growth in infants with cystic fibrosis"],"prefix":"10.1016","volume":"22","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6497-7927","authenticated-orcid":false,"given":"AR","family":"Deschamp","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Y","family":"Chen","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7401-2421","authenticated-orcid":false,"given":"WF","family":"Wang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"M","family":"Rasic","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4703-6177","authenticated-orcid":false,"given":"J","family":"Hatch","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6265-6249","authenticated-orcid":false,"given":"DB","family":"Sanders","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"SC","family":"Ranganathan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"T","family":"Ferkol","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"D","family":"Perkins","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"P","family":"Finn","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9390-0651","authenticated-orcid":false,"given":"SD","family":"Davis","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.jcf.2023.08.001_bib0001","doi-asserted-by":"crossref","first-page":"427","DOI":"10.3389\/fimmu.2014.00427","article-title":"The intestinal microbiome in early life: health and disease","volume":"5","author":"Arrieta","year":"2014","journal-title":"Front Immunol"},{"issue":"5","key":"10.1016\/j.jcf.2023.08.001_bib0002","doi-asserted-by":"crossref","first-page":"968","DOI":"10.1016\/j.clinthera.2015.03.009","article-title":"the role of microbiota on the gut immunology","volume":"37","author":"Min","year":"2015","journal-title":"Clin Ther"},{"key":"10.1016\/j.jcf.2023.08.001_bib0003","doi-asserted-by":"crossref","first-page":"16","DOI":"10.1016\/j.jpeds.2016.08.044","article-title":"Advances in gut microbiome research and relevance to pediatric diseases","volume":"178","author":"Albenberg","year":"2016","journal-title":"J Pediatr"},{"issue":"3","key":"10.1016\/j.jcf.2023.08.001_bib0004","doi-asserted-by":"crossref","first-page":"530","DOI":"10.1016\/j.jpeds.2012.08.040","article-title":"Better nutritional status in early childhood is associated with improved clinical outcomes and survival in patients with cystic fibrosis","volume":"162","author":"Yen","year":"2013","journal-title":"J Pediatr"},{"issue":"9","key":"10.1016\/j.jcf.2023.08.001_bib0005","doi-asserted-by":"crossref","DOI":"10.1101\/cshperspect.a009753","article-title":"The cystic fibrosis intestine","volume":"3","author":"De Lisle","year":"2013","journal-title":"Cold Spring Harb Perspect Med"},{"issue":"S44","key":"10.1016\/j.jcf.2023.08.001_bib0006","doi-asserted-by":"crossref","first-page":"S35","DOI":"10.1002\/ppul.23544","article-title":"The CF gastrointestinal microbiome: structure and clinical impact","volume":"51","author":"Rogers","year":"2016","journal-title":"Pediatr Pulmonol"},{"issue":"1","key":"10.1016\/j.jcf.2023.08.001_bib0007","doi-asserted-by":"crossref","first-page":"138","DOI":"10.1016\/j.jpeds.2015.02.049","article-title":"Associations between gut microbial colonization in early life and respiratory outcomes in cystic fibrosis","volume":"167","author":"Hoen","year":"2015","journal-title":"J Pediatr"},{"key":"10.1016\/j.jcf.2023.08.001_bib0008","doi-asserted-by":"crossref","first-page":"22493","DOI":"10.1038\/srep22493","article-title":"Metagenomic evidence for taxonomic dysbiosis and functional imbalance in the gastrointestinal tracts of children with cystic fibrosis","volume":"6","author":"Manor","year":"2016","journal-title":"Sci Rep"},{"issue":"3","key":"10.1016\/j.jcf.2023.08.001_bib0009","doi-asserted-by":"crossref","first-page":"206","DOI":"10.1016\/j.jcf.2012.10.003","article-title":"Dysbiosis of bifidobacteria and Clostridium cluster XIVa in the cystic fibrosis fecal microbiota","volume":"12","author":"Duytschaever","year":"2013","journal-title":"J Cystic Fibr"},{"issue":"3","key":"10.1016\/j.jcf.2023.08.001_bib0010","doi-asserted-by":"crossref","first-page":"396","DOI":"10.1093\/cid\/cit715","article-title":"Escherichia coli dysbiosis correlates with gastrointestinal dysfunction in children with cystic fibrosis","volume":"58","author":"Hoffman","year":"2014","journal-title":"Clin Infect Dis"},{"issue":"2","key":"10.1016\/j.jcf.2023.08.001_bib0011","doi-asserted-by":"crossref","first-page":"215","DOI":"10.1038\/s41591-019-0714-x","article-title":"Fecal dysbiosis in infants with cystic fibrosis is associated with early linear growth failure","volume":"26","author":"Hayden","year":"2020","journal-title":"Nat Med"},{"issue":"10","key":"10.1016\/j.jcf.2023.08.001_bib0012","doi-asserted-by":"crossref","first-page":"1548","DOI":"10.1513\/AnnalsATS.201702-121OC","article-title":"Association of antibiotics, airway microbiome, and inflammation in infants with cystic fibrosis","volume":"14","author":"Pittman","year":"2017","journal-title":"Ann Am Thorac Soc"},{"key":"10.1016\/j.jcf.2023.08.001_bib0013","doi-asserted-by":"crossref","DOI":"10.1016\/j.jcf.2022.04.014","article-title":"Association between early respiratory viral infections and structural lung disease in infants with cystic fibrosis","author":"Sanders","year":"2022","journal-title":"J Cystic Fibros"},{"key":"10.1016\/j.jcf.2023.08.001_bib0014","doi-asserted-by":"crossref","DOI":"10.1016\/j.jcf.2019.02.004","article-title":"Early respiratory viral infections in infants with cystic fibrosis","author":"Deschamp","year":"2019","journal-title":"J Cystic Fibros"},{"issue":"5","key":"10.1016\/j.jcf.2023.08.001_bib0015","doi-asserted-by":"crossref","first-page":"765","DOI":"10.1016\/j.chom.2021.02.021","article-title":"Developmental trajectory of the healthy human gut microbiota during the first 5 years of life","volume":"29","author":"Roswall","year":"2021","journal-title":"Cell Host Microbe"},{"issue":"2","key":"10.1016\/j.jcf.2023.08.001_bib0016","doi-asserted-by":"crossref","first-page":"377","DOI":"10.1016\/j.jbi.2008.08.010","article-title":"Research electronic data capture (REDCap)\u2013a metadata-driven methodology and workflow process for providing translational research informatics support","volume":"42","author":"Harris","year":"2009","journal-title":"J Biomed Inform"},{"issue":"1","key":"10.1016\/j.jcf.2023.08.001_bib0017","doi-asserted-by":"crossref","first-page":"6","DOI":"10.1186\/2049-2618-2-6","article-title":"An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform","volume":"2","author":"Fadrosh","year":"2014","journal-title":"Microbiome"},{"key":"10.1016\/j.jcf.2023.08.001_bib0018","series-title":"R: a language and environment for statistical computing","year":"2021"},{"key":"10.1016\/j.jcf.2023.08.001_bib0019","unstructured":"WHO. Child growth Standards, Anthro version 3.2.2 2011. [Available from: http:\/\/www.who.int\/childgrowth\/software\/en\/."},{"issue":"7","key":"10.1016\/j.jcf.2023.08.001_bib0020","doi-asserted-by":"crossref","first-page":"581","DOI":"10.1038\/nmeth.3869","article-title":"DADA2: high-resolution sample inference from Illumina amplicon data","volume":"13","author":"Callahan","year":"2016","journal-title":"Nat Methods"},{"issue":"6","key":"10.1016\/j.jcf.2023.08.001_bib0021","doi-asserted-by":"crossref","first-page":"685","DOI":"10.1038\/s41587-020-0548-6","article-title":"PICRUSt2 for prediction of metagenome functions","volume":"38","author":"Douglas","year":"2020","journal-title":"Nat Biotechnol"},{"issue":"Database issue","key":"10.1016\/j.jcf.2023.08.001_bib0022","doi-asserted-by":"crossref","first-page":"D459","DOI":"10.1093\/nar\/gkt1103","article-title":"The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway\/Genome Databases","volume":"42","author":"Caspi","year":"2014","journal-title":"Nucleic Acids Res"},{"issue":"6","key":"10.1016\/j.jcf.2023.08.001_bib0023","doi-asserted-by":"crossref","first-page":"624","DOI":"10.1067\/mpd.2003.152","article-title":"Growth and nutritional indexes in early life predict pulmonary function in cystic fibrosis","volume":"142","author":"Konstan","year":"2003","journal-title":"J Pediatr"},{"issue":"9","key":"10.1016\/j.jcf.2023.08.001_bib0024","doi-asserted-by":"crossref","first-page":"560","DOI":"10.6026\/97320630014560","article-title":"Enterotype variations of the healthy human gut microbiome in different geographical regions","volume":"14","author":"Mobeen","year":"2018","journal-title":"Bioinformation"},{"issue":"4","key":"10.1016\/j.jcf.2023.08.001_bib0025","doi-asserted-by":"crossref","DOI":"10.1128\/mBio.00251-12","article-title":"Serial analysis of the gut and respiratory microbiome in cystic fibrosis in infancy: interaction between intestinal and respiratory tracts and impact of nutritional exposures","volume":"3","author":"Madan","year":"2012","journal-title":"MBio"},{"issue":"2","key":"10.1016\/j.jcf.2023.08.001_bib0026","doi-asserted-by":"crossref","first-page":"e348","DOI":"10.1542\/peds.2011-0567","article-title":"Comparison of the US and Australian cystic fibrosis registries: the impact of newborn screening","volume":"129","author":"Martin","year":"2012","journal-title":"Pediatrics"},{"issue":"Suppl 7","key":"10.1016\/j.jcf.2023.08.001_bib0027","doi-asserted-by":"crossref","first-page":"S738","DOI":"10.1093\/cid\/civ850","article-title":"Assessing the intestinal microbiota in the SHINE Trial","volume":"61","author":"Gough","year":"2015","journal-title":"Clin Infect Dis"},{"issue":"11","key":"10.1016\/j.jcf.2023.08.001_bib0028","doi-asserted-by":"crossref","first-page":"3523","DOI":"10.1093\/jn\/133.11.3523","article-title":"Acetylated, propionylated or butyrylated starches raise large bowel short-chain fatty acids preferentially when fed to rats","volume":"133","author":"Annison","year":"2003","journal-title":"J Nutr"},{"issue":"1","key":"10.1016\/j.jcf.2023.08.001_bib0029","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1007\/s00281-014-0455-3","article-title":"Commensal microbiota regulates T cell fate decision in the gut","volume":"37","author":"Furusawa","year":"2015","journal-title":"Semin Immunopathol"},{"issue":"10","key":"10.1016\/j.jcf.2023.08.001_bib0030","doi-asserted-by":"crossref","first-page":"1116","DOI":"10.1038\/ejcn.2010.123","article-title":"Short-chain fatty acids and commensal microbiota in the faeces of severely malnourished children with cholera rehydrated with three different carbohydrates","volume":"64","author":"Monira","year":"2010","journal-title":"Eur J Clin Nutr"},{"issue":"1","key":"10.1016\/j.jcf.2023.08.001_bib0031","doi-asserted-by":"crossref","first-page":"95","DOI":"10.1111\/1462-2920.13463","article-title":"Pediatric obesity is associated with an altered gut microbiota and discordant shifts in Firmicutes populations","volume":"19","author":"Riva","year":"2017","journal-title":"Environ Microbiol"},{"key":"10.1016\/j.jcf.2023.08.001_bib0032","doi-asserted-by":"crossref","DOI":"10.1136\/thoraxjnl-2016-209279","article-title":"The lower airway microbiota in early cystic fibrosis lung disease: a longitudinal analysis","author":"Frayman","year":"2017","journal-title":"Thorax"}],"container-title":["Journal of Cystic Fibrosis"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1569199323008688?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1569199323008688?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,5,15]],"date-time":"2026-05-15T05:12:58Z","timestamp":1778821978000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1569199323008688"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,11]]},"references-count":32,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2023,11]]}},"alternative-id":["S1569199323008688"],"URL":"https:\/\/doi.org\/10.1016\/j.jcf.2023.08.001","relation":{},"ISSN":["1569-1993"],"issn-type":[{"value":"1569-1993","type":"print"}],"subject":[],"published":{"date-parts":[[2023,11]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"The association between gut microbiome and growth in infants with cystic fibrosis","name":"articletitle","label":"Article Title"},{"value":"Journal of Cystic Fibrosis","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.jcf.2023.08.001","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2023 European Cystic Fibrosis Society. Published by Elsevier B.V.","name":"copyright","label":"Copyright"}]}}