{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T05:01:50Z","timestamp":1793509310294,"version":"4.5.0"},"reference-count":166,"publisher":"Elsevier BV","issue":"6","license":[{"start":{"date-parts":[[2024,6,1]],"date-time":"2024-06-01T00:00:00Z","timestamp":1717200000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2024,6,1]],"date-time":"2024-06-01T00:00:00Z","timestamp":1717200000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,6,1]],"date-time":"2025-06-01T00:00:00Z","timestamp":1748736000000},"content-version":"vor","delay-in-days":365,"URL":"http:\/\/www.elsevier.com\/open-access\/userlicense\/1.0\/"}],"funder":[{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"publisher","award":["CRC 1182"],"award-info":[{"award-number":["CRC 1182"]}],"id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"publisher","award":["CRC 1461"],"award-info":[{"award-number":["CRC 1461"]}],"id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100006686","name":"University of Miami","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100006686","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100007631","name":"Canadian Institute for Advanced Research","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100007631","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["jidonline.org","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Journal of Investigative Dermatology"],"published-print":{"date-parts":[[2024,6]]},"DOI":"10.1016\/j.jid.2023.11.006","type":"journal-article","created":{"date-parts":[[2023,12,7]],"date-time":"2023-12-07T12:00:29Z","timestamp":1701950429000},"page":"1353-1367.e15","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":31,"title":["Spatial Distribution and Functional Impact of Human Scalp Hair Follicle Microbiota"],"prefix":"10.1016","volume":"144","author":[{"given":"Marta B.","family":"Lousada","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Janin","family":"Edelkamp","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tim","family":"Lachnit","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Markus","family":"Fehrholz","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Irena","family":"Pastar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Francisco","family":"Jimenez","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hanieh","family":"Erdmann","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Thomas C.G.","family":"Bosch","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ralf","family":"Paus","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.jid.2023.11.006_bib1","first-page":"103","article-title":"Rescuing key native traits in cultured dermal papilla cells for human hair regeneration","volume":"30","author":"Abreu","year":"2020","journal-title":"J\u00a0Adv Res"},{"key":"10.1016\/j.jid.2023.11.006_bib2","doi-asserted-by":"crossref","first-page":"63","DOI":"10.1016\/j.jdermsci.2012.03.004","article-title":"Pattern of tissue invasion by Propionibacterium acnes in acne vulgaris","volume":"67","author":"Alexeyev","year":"2012","journal-title":"J\u00a0Dermatol Sci"},{"key":"10.1016\/j.jid.2023.11.006_bib3","doi-asserted-by":"crossref","first-page":"221","DOI":"10.1007\/s00441-022-03730-w","article-title":"The dermal papilla dilemma and potential breakthroughs in bioengineering hair follicles","volume":"391","author":"Andl","year":"2023","journal-title":"Cell Tissue Res"},{"key":"10.1016\/j.jid.2023.11.006_bib4","author":"Andrews"},{"key":"10.1016\/j.jid.2023.11.006_bib5","doi-asserted-by":"crossref","first-page":"7500","DOI":"10.1073\/pnas.0611551104","article-title":"Negative regulation of the RIG-I signaling by the ubiquitin ligase RNF125","volume":"104","author":"Arimoto","year":"2007","journal-title":"Proc Natl Acad Sci USA"},{"key":"10.1016\/j.jid.2023.11.006_bib6","doi-asserted-by":"crossref","first-page":"703","DOI":"10.1111\/exd.14155","article-title":"Hair follicle immune privilege and its collapse in alopecia areata","volume":"29","author":"Bertolini","year":"2020","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib7","doi-asserted-by":"crossref","first-page":"e94260","DOI":"10.1371\/journal.pone.0094260","article-title":"Abnormal interactions between perifollicular mast cells and CD8+ T-cells may contribute to the pathogenesis of alopecia areata","volume":"9","author":"Bertolini","year":"2014","journal-title":"PLoS One"},{"key":"10.1016\/j.jid.2023.11.006_bib8","doi-asserted-by":"crossref","first-page":"1440","DOI":"10.1111\/exd.14364","article-title":"Can antibiotic-induced changes in the composition of the hair follicle microbiome regulate human hair growth?","volume":"30","author":"Bispo Lousada","year":"2021","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib9","doi-asserted-by":"crossref","first-page":"3346","DOI":"10.1096\/fj.07-8628com","article-title":"Human hair follicles are an extrarenal source and a nonhematopoietic target of erythropoietin","volume":"21","author":"Bod\u00f3","year":"2007","journal-title":"FASEB J"},{"key":"10.1016\/j.jid.2023.11.006_bib10","doi-asserted-by":"crossref","first-page":"2114","DOI":"10.1093\/bioinformatics\/btu170","article-title":"Trimmomatic: a flexible trimmer for Illumina sequence data","volume":"30","author":"Bolger","year":"2014","journal-title":"Bioinformaatics"},{"key":"10.1016\/j.jid.2023.11.006_bib11","doi-asserted-by":"crossref","first-page":"E2120","DOI":"10.1073\/pnas.1424409112","article-title":"Molecular cartography of the human skin surface in 3D","volume":"112","author":"Bouslimani","year":"2015","journal-title":"Proc Natl Acad Sci USA"},{"key":"10.1016\/j.jid.2023.11.006_bib12","doi-asserted-by":"crossref","first-page":"143","DOI":"10.1038\/nrmicro.2017.157","article-title":"The human skin microbiome","volume":"16","author":"Byrd","year":"2018","journal-title":"Nat Rev Microbiol"},{"key":"10.1016\/j.jid.2023.11.006_bib13","doi-asserted-by":"crossref","first-page":"109804","DOI":"10.1016\/j.celrep.2021.109804","article-title":"PI3K\u03b4 coordinates transcriptional, chromatin, and metabolic changes to promote effector CD8+ T cells at the expense of central memory","volume":"37","author":"Cannons","year":"2021","journal-title":"Cell Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib14","doi-asserted-by":"crossref","first-page":"2325","DOI":"10.1016\/j.jid.2021.04.006","article-title":"Fanning the flames: IRAK2 signaling in differentiated epithelium potentiates skin inflammation","volume":"141","author":"Castillo","year":"2021","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib15","doi-asserted-by":"crossref","first-page":"3413","DOI":"10.1016\/j.celrep.2019.05.070","article-title":"Stimulation of hair growth by small molecules that activate autophagy","volume":"27","author":"Chai","year":"2019","journal-title":"Cell Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib16","doi-asserted-by":"crossref","first-page":"3624","DOI":"10.1038\/s41467-018-05973-0","article-title":"Olfactory receptor OR2AT4 regulates human hair growth","volume":"9","author":"Ch\u00e9ret","year":"2018","journal-title":"Nat Commun"},{"key":"10.1016\/j.jid.2023.11.006_bib17","doi-asserted-by":"crossref","first-page":"960488","DOI":"10.3389\/fimmu.2022.960488","article-title":"Innate immunity and microbial dysbiosis in hidradenitis suppurativa \u2013 vicious cycle of chronic inflammation","volume":"13","author":"Chopra","year":"2022","journal-title":"Front Immunol"},{"key":"10.1016\/j.jid.2023.11.006_bib18","doi-asserted-by":"crossref","first-page":"862","DOI":"10.1046\/j.1365-2133.2000.03464.x","article-title":"The human hair follicle immune system: cellular composition and immune privilege","volume":"142","author":"Christoph","year":"2000","journal-title":"Br J Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib19","doi-asserted-by":"crossref","first-page":"eaay5445","DOI":"10.1126\/scitranslmed.aay5445","article-title":"A\u00a0Cutibacterium acnes antibiotic modulates human skin microbiota composition in hair follicles","volume":"12","author":"Claesen","year":"2020","journal-title":"Sci Transl Med"},{"key":"10.1016\/j.jid.2023.11.006_bib20","doi-asserted-by":"crossref","first-page":"46","DOI":"10.1186\/s40168-019-0658-x","article-title":"Sunbeam: an extensible pipeline for analyzing metagenomic sequencing experiments","volume":"7","author":"Clarke","year":"2019","journal-title":"Microbiome"},{"key":"10.1016\/j.jid.2023.11.006_bib21","doi-asserted-by":"crossref","first-page":"236","DOI":"10.3390\/biomedicines9030236","article-title":"The potential relevance of the microbiome to hair physiology and regeneration: the emerging role of metagenomics","volume":"9","author":"Constantinou","year":"2021","journal-title":"Biomedicines"},{"key":"10.1016\/j.jid.2023.11.006_bib22","doi-asserted-by":"crossref","first-page":"266","DOI":"10.3390\/biomedicines9030266","article-title":"Dysbiosis and enhanced beta-defensin production in hair follicles of patients with lichen planopilaris and frontal fibrosing alopecia","volume":"9","author":"Constantinou","year":"2021","journal-title":"Biomedicines"},{"key":"10.1016\/j.jid.2023.11.006_bib23","doi-asserted-by":"crossref","first-page":"171","DOI":"10.1016\/j.chom.2021.12.007","article-title":"Anatomy promotes neutral coexistence of strains in the human skin microbiome","volume":"30","author":"Conwill","year":"2022","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.jid.2023.11.006_bib24","doi-asserted-by":"crossref","first-page":"15","DOI":"10.1093\/bioinformatics\/bts635","article-title":"STAR: ultrafast universal RNA-seq aligner","volume":"29","author":"Dobin","year":"2013","journal-title":"Bioinformatics"},{"key":"10.1016\/j.jid.2023.11.006_bib25","doi-asserted-by":"crossref","first-page":"305","DOI":"10.1016\/j.actbio.2021.10.026","article-title":"Bone marrow mesenchymal stem cells offer an immune-privileged niche to Cutibacterium acnes in case of implant-associated osteomyelitis","volume":"137","author":"Dubus","year":"2022","journal-title":"Acta Biomater"},{"key":"10.1016\/j.jid.2023.11.006_bib26","doi-asserted-by":"crossref","first-page":"105","DOI":"10.1007\/978-1-0716-0648-3_9","article-title":"Methods to study human hair follicle growth ex\u00a0vivo: human microdissected hair follicle and human full thickness skin organ culture","volume":"2154","author":"Edelkamp","year":"2020","journal-title":"Methods Mol Biol"},{"issue":"2","key":"10.1016\/j.jid.2023.11.006_bib27","doi-asserted-by":"crossref","first-page":"99","DOI":"10.1016\/j.jdermsci.2023.09.006","article-title":"Management of the human hair follicle microbiome by a synthetic odorant","volume":"112","author":"Edelkamp","year":"2023","journal-title":"J Dermatol Sci"},{"key":"10.1016\/j.jid.2023.11.006_bib28","doi-asserted-by":"crossref","first-page":"fnab014","DOI":"10.1093\/femsle\/fnab014","article-title":"Interaction of implant infection-related commensal bacteria with mesenchymal stem cells: a comparison between Cutibacterium acnes and Staphylococcus aureus","volume":"368","author":"El-Mahdy","year":"2021","journal-title":"FEMS Microbiol Lett"},{"key":"10.1016\/j.jid.2023.11.006_bib29","doi-asserted-by":"crossref","first-page":"1023","DOI":"10.1111\/j.1365-2133.2011.10765.x","article-title":"Immunohistological pointers to a possible role for excessive cathelicidin (LL-37) expression by apocrine sweat glands in the pathogenesis of hidradenitis suppurativa\/acne inversa","volume":"166","author":"Emelianov","year":"2012","journal-title":"Br J Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib30","doi-asserted-by":"crossref","first-page":"55","DOI":"10.1038\/s41579-020-0433-9","article-title":"Gut microbiota in human metabolic health and disease","volume":"19","author":"Fan","year":"2021","journal-title":"Nat Rev Microbiol"},{"key":"10.1016\/j.jid.2023.11.006_bib31","doi-asserted-by":"crossref","first-page":"20761","DOI":"10.1038\/s41598-021-99652-8","article-title":"Human hair follicles operate an internal Cori cycle and modulate their growth via glycogen phosphorylase","volume":"11","author":"Figlak","year":"2021","journal-title":"Sci Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib32","doi-asserted-by":"crossref","first-page":"190","DOI":"10.1016\/j.chom.2020.06.017","article-title":"The skin microbiota: balancing risk and reward","volume":"28","author":"Flowers","year":"2020","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.jid.2023.11.006_bib33","doi-asserted-by":"crossref","first-page":"E1752","DOI":"10.3390\/microorganisms8111752","article-title":"Staphylococcus epidermidis and Cutibacterium acnes: two Major Sentinels of Skin microbiota and the Influence of Cosmetics","volume":"8","author":"Fourni\u00e8re","year":"2020","journal-title":"Microorganisms"},{"key":"10.1016\/j.jid.2023.11.006_bib34","doi-asserted-by":"crossref","first-page":"126ra34","DOI":"10.1126\/scitranslmed.3003122","article-title":"Prostaglandin D2 inhibits hair growth and is elevated in bald scalp of men with androgenetic alopecia","volume":"4","author":"Garza","year":"2012","journal-title":"Sci Transl Med"},{"key":"10.1016\/j.jid.2023.11.006_bib35","doi-asserted-by":"crossref","first-page":"1179","DOI":"10.1111\/brv.12151","article-title":"Resting no more: re-defining telogen, the maintenance stage of the hair growth cycle","volume":"90","author":"Geyfman","year":"2015","journal-title":"Biol Rev Camb Philos Soc"},{"key":"10.1016\/j.jid.2023.11.006_bib36","doi-asserted-by":"crossref","first-page":"244","DOI":"10.1038\/nrmicro2537","article-title":"The skin microbiome [published correction appears in Nat Rev Microbiol 2011;9:626]","volume":"9","author":"Grice","year":"2011","journal-title":"Nat Rev Microbiol"},{"key":"10.1016\/j.jid.2023.11.006_bib37","doi-asserted-by":"crossref","first-page":"747","DOI":"10.1016\/j.jid.2019.01.024","article-title":"Research techniques made simple: profiling the skin microbiota","volume":"139","author":"Grogan","year":"2019","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib38","doi-asserted-by":"crossref","first-page":"2033","DOI":"10.1016\/j.jid.2018.02.038","article-title":"Isolation and identification of the follicular microbiome: implications for acne research","volume":"138","author":"Hall","year":"2018","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib39","doi-asserted-by":"crossref","first-page":"2543","DOI":"10.1016\/j.jid.2019.04.026","article-title":"Human perifollicular macrophages undergo apoptosis, express Wnt ligands, and switch their polarization during catagen","volume":"139","author":"Hardman","year":"2019","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib40","doi-asserted-by":"crossref","first-page":"1053","DOI":"10.1038\/jid.2014.442","article-title":"The peripheral clock regulates human pigmentation","volume":"135","author":"Hardman","year":"2015","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib41","doi-asserted-by":"crossref","first-page":"940","DOI":"10.1126\/science.abo0693","article-title":"Microbiota and maintenance of skin barrier function","volume":"376","author":"Harris-Tryon","year":"2022","journal-title":"Science"},{"key":"10.1016\/j.jid.2023.11.006_bib42","first-page":"334","article-title":"The small chain fatty acid butyrate antagonizes the TCR-stimulation-induced metabolic shift in murine epidermal gamma Delta T cells","volume":"19","author":"H\u00e4selbarth","year":"2020","journal-title":"EXCLI J"},{"key":"10.1016\/j.jid.2023.11.006_bib43","doi-asserted-by":"crossref","first-page":"e0216330","DOI":"10.1371\/journal.pone.0216330","article-title":"Microbiome in the hair follicle of androgenetic alopecia patients","volume":"14","author":"Ho","year":"2019","journal-title":"PloS One"},{"key":"10.1016\/j.jid.2023.11.006_bib44","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1007\/s00403-008-0899-1","article-title":"Roxithromycin antagonizes catagen induction in murine and human hair follicles: implication of topical Roxithromycin as hair restoration reagent","volume":"301","author":"Ito","year":"2009","journal-title":"Arch Dermatol Res"},{"key":"10.1016\/j.jid.2023.11.006_bib45","doi-asserted-by":"crossref","first-page":"687","DOI":"10.1111\/exd.12482","article-title":"Three dimensional distribution of Propionibacterium acnes biofilms in human skin","volume":"23","author":"Jahns","year":"2014","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib46","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1111\/apm.12103","article-title":"Microbiology of folliculitis: a histological study of 39 cases","volume":"122","author":"Jahns","year":"2014","journal-title":"APMIS"},{"key":"10.1016\/j.jid.2023.11.006_bib47","doi-asserted-by":"crossref","first-page":"1025","DOI":"10.1111\/jdv.12448","article-title":"Microbiology of folliculitis decalvans: a histological study of 37 patients","volume":"29","author":"Jahns","year":"2015","journal-title":"J\u00a0Eur Acad Dermatol Venereol"},{"key":"10.1016\/j.jid.2023.11.006_bib48","doi-asserted-by":"crossref","first-page":"169","DOI":"10.1111\/ics.12022","article-title":"Metabolic analysis of the cutaneous fungi Malassezia globosa and M.\u00a0restricta for insights on scalp condition and dandruff","volume":"35","author":"James","year":"2013","journal-title":"Int J Cosmet Sci"},{"key":"10.1016\/j.jid.2023.11.006_bib49","doi-asserted-by":"crossref","first-page":"917","DOI":"10.1046\/j.1523-1747.2000.00945.x","article-title":"Serpins in the human hair follicle","volume":"114","author":"Jensen","year":"2000","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib50","doi-asserted-by":"crossref","first-page":"182","DOI":"10.1186\/1471-2105-15-182","article-title":"Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads","volume":"15","author":"Jiang","year":"2014","journal-title":"BMC Bioinformatics"},{"key":"10.1016\/j.jid.2023.11.006_bib51","doi-asserted-by":"crossref","first-page":"5136","DOI":"10.3390\/molecules27165136","article-title":"Staphylococcus epidermidis Cicaria, a novel strain derived from the human microbiome, and its efficacy as a treatment for hair loss","volume":"27","author":"Jo","year":"2022","journal-title":"Molecules"},{"key":"10.1016\/j.jid.2023.11.006_bib52","doi-asserted-by":"crossref","first-page":"877","DOI":"10.1111\/j.0022-202X.2005.23693.x","article-title":"Comprehensive analysis of FGF and FGFR expression in skin: FGF18 is highly expressed in hair follicles and capable of inducing anagen from telogen stage hair follicles","volume":"124","author":"Kawano","year":"2005","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib53","doi-asserted-by":"crossref","first-page":"1161","DOI":"10.1038\/s41423-020-00625-0","article-title":"Control of lymphocyte functions by gut microbiota-derived short-chain fatty acids","volume":"18","author":"Kim","year":"2021","journal-title":"Cell Mol Immunol"},{"key":"10.1016\/j.jid.2023.11.006_bib54","doi-asserted-by":"crossref","first-page":"2351","DOI":"10.1038\/s41598-022-06189-5","article-title":"Aged related human skin microbiome and mycobiome in Korean women","volume":"12","author":"Kim","year":"2022","journal-title":"Sci Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib55","doi-asserted-by":"crossref","first-page":"305","DOI":"10.1111\/j.1600-0625.2009.00939.x","article-title":"Methods in hair research: how to objectively distinguish between anagen and catagen in human hair follicle organ culture","volume":"19","author":"Kloepper","year":"2010","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib56","doi-asserted-by":"crossref","first-page":"e2100207","DOI":"10.1002\/bies.202100207","article-title":"Skin aging: dermal adipocytes metabolically reprogram dermal fibroblasts","volume":"44","author":"Kruglikov","year":"2022","journal-title":"Bioessays"},{"key":"10.1016\/j.jid.2023.11.006_bib57","doi-asserted-by":"crossref","first-page":"20327","DOI":"10.1038\/s41598-022-24577-9","article-title":"Macrophage polarity and wound age determination","volume":"12","author":"Kuninaka","year":"2022","journal-title":"Sci Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib58","doi-asserted-by":"crossref","first-page":"903","DOI":"10.1111\/exd.12836","article-title":"Human hair follicle organ culture: theory, application and perspectives","volume":"24","author":"Langan","year":"2015","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib59","doi-asserted-by":"crossref","first-page":"38","DOI":"10.1080\/15548627.2019.1635384","article-title":"New insights into the interplay between autophagy, gut microbiota and inflammatory responses in IBD","volume":"16","author":"Larabi","year":"2020","journal-title":"Autophagy"},{"key":"10.1016\/j.jid.2023.11.006_bib60","doi-asserted-by":"crossref","first-page":"1434","DOI":"10.1016\/j.jid.2017.02.983","article-title":"Compartmentation of mitochondrial and oxidative metabolism in growing hair follicles: a ring of fire","volume":"137","author":"Lemasters","year":"2017","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib61","doi-asserted-by":"crossref","first-page":"e45977","DOI":"10.7554\/eLife.45977","article-title":"Skin vasculature and hair follicle cross-talking associated with stem cell activation and tissue homeostasis","volume":"8","author":"Li","year":"2019","journal-title":"Elife"},{"key":"10.1016\/j.jid.2023.11.006_bib62","doi-asserted-by":"crossref","first-page":"14","DOI":"10.1038\/s41419-021-04469-y","article-title":"BNIP3L\/NIX-mediated mitophagy: molecular mechanisms and implications for human disease","volume":"13","author":"Li","year":"2021","journal-title":"Cell Death Dis"},{"key":"10.1016\/j.jid.2023.11.006_bib63","doi-asserted-by":"crossref","first-page":"6799","DOI":"10.1038\/s41467-022-34409-z","article-title":"De novo identification of microbial contaminants in low microbial biomass microbiomes with Squeegee","volume":"13","author":"Liu","year":"2022","journal-title":"Nat Commun"},{"key":"10.1016\/j.jid.2023.11.006_bib64","doi-asserted-by":"crossref","first-page":"29","DOI":"10.1186\/s13104-023-06302-5","article-title":"Laser capture microdissection as a method for investigating the human hair follicle microbiome reveals region-specific differences in the bacteriome profile","volume":"16","author":"Lousada","year":"2023","journal-title":"BMC Res Notes"},{"key":"10.1016\/j.jid.2023.11.006_bib65","doi-asserted-by":"crossref","first-page":"802","DOI":"10.1111\/bjd.19461","article-title":"Exploring the human hair follicle microbiome","volume":"184","author":"Lousada","year":"2021","journal-title":"Br J Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib66","doi-asserted-by":"crossref","first-page":"550","DOI":"10.1186\/s13059-014-0550-8","article-title":"Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2","volume":"15","author":"Love","year":"2014","journal-title":"Genome Biol"},{"key":"10.1016\/j.jid.2023.11.006_bib67","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pcbi.1006277","article-title":"Removing contaminants from databases of draft genomes","volume":"14","author":"Lu","year":"2018","journal-title":"PLoS Comput Biol"},{"key":"10.1016\/j.jid.2023.11.006_bib68","doi-asserted-by":"crossref","first-page":"e00517","DOI":"10.1128\/AEM.00517-18","article-title":"Development of a new application for comprehensive viability analysis based on microbiome analysis by next-generation sequencing: insights into staphylococcal carriage in human nasal cavities","volume":"84","author":"Lu","year":"2018","journal-title":"Appl Environ Microbiol"},{"key":"10.1016\/j.jid.2023.11.006_bib69","doi-asserted-by":"crossref","first-page":"427","DOI":"10.1111\/j.1600-0625.2008.00704.x","article-title":"Non-pathogenic commensal Escherichia coli bacteria can inhibit degranulation of mast cells","volume":"17","author":"Magerl","year":"2008","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib70","doi-asserted-by":"crossref","first-page":"1990827","DOI":"10.1080\/19490976.2021.1990827","article-title":"Gut microbiota: sculptors of the intestinal stem cell niche in health and inflammatory bowel disease","volume":"13","author":"Markandey","year":"2021","journal-title":"Gut Microbes"},{"key":"10.1016\/j.jid.2023.11.006_bib71","doi-asserted-by":"crossref","first-page":"10","DOI":"10.14806\/ej.17.1.200","article-title":"Cutadapt removes adapter sequences from high-throughput sequencing reads","volume":"17","author":"Martin","year":"2011","journal-title":"EMBnet.journal"},{"key":"10.1016\/j.jid.2023.11.006_bib72","first-page":"94","article-title":"Assessment of Sep1virus interaction with stationary cultures by transcriptional and flow cytometry studies","author":"Melo","year":"2018","journal-title":"FEMS Microbiol Ecol"},{"key":"10.1016\/j.jid.2023.11.006_bib73","doi-asserted-by":"crossref","first-page":"1076","DOI":"10.3390\/v12101076","article-title":"The protective effect of Staphylococcus epidermidis biofilm matrix against phage predation","volume":"12","author":"Melo","year":"2020","journal-title":"Viruses"},{"key":"10.1016\/j.jid.2023.11.006_bib74","doi-asserted-by":"crossref","first-page":"506","DOI":"10.1099\/vir.0.060590-0","article-title":"Isolation and characterization of a new Staphylococcus epidermidis broad-spectrum bacteriophage","volume":"95","author":"Melo","year":"2014","journal-title":"J\u00a0Gen Virol"},{"key":"10.1016\/j.jid.2023.11.006_bib75","doi-asserted-by":"crossref","first-page":"4042","DOI":"10.1038\/s41467-019-11880-9","article-title":"SOX11 and SOX4 drive the reactivation of an embryonic gene program during murine wound repair","volume":"10","author":"Miao","year":"2019","journal-title":"Nat Commun"},{"key":"10.1016\/j.jid.2023.11.006_bib76","doi-asserted-by":"crossref","first-page":"111100","DOI":"10.1016\/j.celrep.2022.111100","article-title":"Sox2 in the dermal papilla regulates hair follicle pigmentation","volume":"40","author":"Ng","year":"2022","journal-title":"Cell Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib77","doi-asserted-by":"crossref","first-page":"1633","DOI":"10.1016\/j.jid.2020.12.019","article-title":"Dermal adipose tissue secretes HGF to promote human hair growth and pigmentation","volume":"141","author":"Nicu","year":"2021","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib78","doi-asserted-by":"crossref","first-page":"177","DOI":"10.1186\/s40168-018-0558-5","article-title":"Host-microbiome interactions and recent progress into understanding the biology of acne vulgaris","volume":"6","author":"O\u2019Neill","year":"2018","journal-title":"Microbiome"},{"key":"10.1016\/j.jid.2023.11.006_bib79","doi-asserted-by":"crossref","first-page":"107","DOI":"10.1111\/brv.12648","article-title":"The biology of human hair greying","volume":"96","author":"O\u2019Sullivan","year":"2021","journal-title":"Biol Rev Camb Philos Soc"},{"key":"10.1016\/j.jid.2023.11.006_bib80","doi-asserted-by":"crossref","first-page":"12086","DOI":"10.1038\/s41598-018-30588-2","article-title":"Understanding the mechanism of action of the anti-dandruff agent zinc Pyrithione against Malassezia restricta","volume":"8","author":"Park","year":"2018","journal-title":"Sci Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib81","doi-asserted-by":"crossref","first-page":"e2002864","DOI":"10.1371\/journal.pbio.2002864","article-title":"Autophagy is essential for maintaining the growth of a human (mini-)organ: evidence from scalp hair follicle organ culture","volume":"16","author":"Parodi","year":"2018","journal-title":"PLoS Biol"},{"key":"10.1016\/j.jid.2023.11.006_bib82","doi-asserted-by":"crossref","first-page":"491","DOI":"10.1056\/NEJM199908123410706","article-title":"The biology of hair follicles","volume":"341","author":"Paus","year":"1999","journal-title":"N\u00a0Engl J Med"},{"key":"10.1016\/j.jid.2023.11.006_bib83","doi-asserted-by":"crossref","first-page":"489","DOI":"10.1111\/j.1432-0436.2004.07209004.x","article-title":"In search of the \u201chair cycle clock\u201d: a guided tour","volume":"72","author":"Paus","year":"2004","journal-title":"Differentiation"},{"key":"10.1016\/j.jid.2023.11.006_bib84","doi-asserted-by":"crossref","first-page":"60","DOI":"10.1111\/imm.12810","article-title":"Lower levels of interleukin-1\u03b2 gene expression are associated with impaired Langerhans\u2019 cell migration in aged human skin","volume":"153","author":"Pilkington","year":"2018","journal-title":"Immunology"},{"key":"10.1016\/j.jid.2023.11.006_bib85","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0215206","article-title":"Scalp bacterial shift in alopecia areata","volume":"14","author":"Pinto","year":"2019","journal-title":"PLoS One"},{"key":"10.1016\/j.jid.2023.11.006_bib86","doi-asserted-by":"crossref","first-page":"1163","DOI":"10.1111\/bjd.16436","article-title":"Eccrine sweat glands associate with the human hair follicle within a defined compartment of dermal white adipose tissue","volume":"178","author":"Poblet","year":"2018","journal-title":"Br J Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib87","doi-asserted-by":"crossref","first-page":"22","DOI":"10.1684\/ejd.2020.3948","article-title":"Identification of anti-microbial peptides and traces of microbial DNA in infrainfundibular compartments of human scalp terminal hair follicles","volume":"31","author":"Polak-Witka","year":"2021","journal-title":"Eur J Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib88","doi-asserted-by":"crossref","first-page":"286","DOI":"10.1111\/exd.13935","article-title":"The role of the microbiome in scalp hair follicle biology and disease","volume":"29","author":"Polak-Witka","year":"2020","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib89","doi-asserted-by":"crossref","first-page":"9104","DOI":"10.1038\/s41598-022-13056-w","article-title":"LGR5 is a conserved marker of hair follicle stem cells in multiple species and is present early and throughout follicle morphogenesis","volume":"12","author":"Polkoff","year":"2022","journal-title":"Sci Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib90","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0065388","article-title":"Archaea on Human Skin","volume":"8","author":"Probst","year":"2013","journal-title":"PLoS One"},{"key":"10.1016\/j.jid.2023.11.006_bib91","doi-asserted-by":"crossref","first-page":"645","DOI":"10.1111\/exd.14300","article-title":"Compartmentalised metabolic programmes in human anagen hair follicles: new targets to modulate epithelial stem cell behaviour, keratinocyte proliferation and hair follicle immune status?","volume":"30","author":"Purba","year":"2021","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib92","first-page":"1","article-title":"Immunomodulatory potential of gut microbiome-derived short-chain fatty acids (SCFAs)","volume":"66","author":"Ratajczak","year":"2019","journal-title":"Acta Biochim Pol"},{"key":"10.1016\/j.jid.2023.11.006_bib93","doi-asserted-by":"crossref","first-page":"78","DOI":"10.1111\/j.1365-2133.2009.09154.x","article-title":"Human hair follicle epithelium has an antimicrobial defence system that includes the inducible antimicrobial peptide psoriasin (S100A7) and RNase 7","volume":"161","author":"Reithmayer","year":"2009","journal-title":"Br J Dermatol"},{"issue":"19","key":"10.1016\/j.jid.2023.11.006_bib138","doi-asserted-by":"crossref","first-page":"11956","DOI":"10.3390\/ijms231911956","article-title":"The First Evidence of Bacterial Foci in the Hair Part and Dermal Papilla of Scalp Hair Follicles: A Pilot Comparative Study in Alopecia Areata","volume":"23","author":"Rinaldi","year":"2022","journal-title":"Int J Mol Sci"},{"key":"10.1016\/j.jid.2023.11.006_bib94","doi-asserted-by":"crossref","first-page":"1775","DOI":"10.1111\/jdv.15597","article-title":"The microbiome of tunnels in hidradenitis suppurativa patients","volume":"33","author":"Ring","year":"2019","journal-title":"J\u00a0Eur Acad Dermatol Venereol"},{"key":"10.1016\/j.jid.2023.11.006_bib95","doi-asserted-by":"crossref","first-page":"738","DOI":"10.1111\/j.1474-9726.2009.00526.x","article-title":"Hedgehog signaling maintains hair follicle stem cell phenotype in young and aged human skin","volume":"8","author":"Ritti\u00e9","year":"2009","journal-title":"Aging Cell"},{"key":"10.1016\/j.jid.2023.11.006_bib96","doi-asserted-by":"crossref","first-page":"87","DOI":"10.1186\/s12915-014-0087-z","article-title":"Reagent and laboratory contamination can critically impact sequence-based microbiome analyses","volume":"12","author":"Salter","year":"2014","journal-title":"BMC Biol"},{"key":"10.1016\/j.jid.2023.11.006_bib97","doi-asserted-by":"crossref","first-page":"R132","DOI":"10.1016\/j.cub.2008.12.005","article-title":"The hair follicle as a dynamic miniorgan","volume":"19","author":"Schneider","year":"2009","journal-title":"Curr Biol"},{"key":"10.1016\/j.jid.2023.11.006_bib98","doi-asserted-by":"crossref","first-page":"855","DOI":"10.1016\/j.jid.2016.11.014","article-title":"The short-chain fatty acid sodium butyrate functions as a regulator of the skin immune system","volume":"137","author":"Schwarz","year":"2017","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib99","doi-asserted-by":"crossref","first-page":"684","DOI":"10.1111\/exd.14740","article-title":"Concentration-dependent stimulation of melanin production as well as melanocyte and keratinocyte proliferation by melatonin in human eyelid epidermis","volume":"32","author":"Sevilla","year":"2023","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib100","doi-asserted-by":"crossref","first-page":"W216","DOI":"10.1093\/nar\/gkac194","article-title":"DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)","volume":"50","author":"Sherman","year":"2022","journal-title":"Nucleic Acids Res"},{"key":"10.1016\/j.jid.2023.11.006_bib101","doi-asserted-by":"crossref","first-page":"345","DOI":"10.1007\/s40257-017-0336-3","article-title":"Dermatologic reactions to immune checkpoint inhibitors : skin toxicities and immunotherapy","volume":"19","author":"Sibaud","year":"2018","journal-title":"Am J Clin Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib102","doi-asserted-by":"crossref","first-page":"354","DOI":"10.1093\/bioinformatics\/btv584","article-title":"SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data","volume":"32","author":"Silva","year":"2016","journal-title":"Bioinformaatics"},{"key":"10.1016\/j.jid.2023.11.006_bib103","doi-asserted-by":"crossref","first-page":"489","DOI":"10.3389\/fnmol.2018.00489","article-title":"Improvement of mesenchymal stem cell immunomodulatory properties by heat-killed Propionibacterium acnes via TLR2","volume":"11","author":"Silveira","year":"2019","journal-title":"Front Mol Neurosci"},{"key":"10.1016\/j.jid.2023.11.006_bib104","doi-asserted-by":"crossref","first-page":"979","DOI":"10.1152\/physrev.2000.80.3.979","article-title":"Corticotropin releasing hormone and proopiomelanocortin involvement in the cutaneous response to stress","volume":"80","author":"Slominski","year":"2000","journal-title":"Physiol Rev"},{"key":"10.1016\/j.jid.2023.11.006_bib105","doi-asserted-by":"crossref","DOI":"10.15252\/embr.202256574","article-title":"mTORC1 activity negatively regulates human hair follicle growth and pigmentation","volume":"24","author":"Suzuki","year":"2023","journal-title":"EMBO Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib106","doi-asserted-by":"crossref","DOI":"10.7717\/peerj.1821","article-title":"Mitochondrial aerobic respiration is activated during hair follicle stem cell differentiation, and its dysfunction retards hair regeneration","volume":"4","author":"Tang","year":"2016","journal-title":"PeerJ"},{"key":"10.1016\/j.jid.2023.11.006_bib107","doi-asserted-by":"crossref","first-page":"2957","DOI":"10.1016\/j.jid.2021.04.028","article-title":"UDP-GlcNAc-1-Phosphotransferase is a clinically important regulator of human and mouse hair pigmentation","volume":"141","author":"Tiede","year":"2021","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib108","doi-asserted-by":"crossref","first-page":"311","DOI":"10.3390\/toxins11060311","article-title":"A\u00a0derivative of butyric acid, the fermentation metabolite of Staphylococcus epidermidis, inhibits the growth of a Staphylococcus aureus Strain isolated from atopic dermatitis patients","volume":"11","author":"Traisaeng","year":"2019","journal-title":"Toxins"},{"key":"10.1016\/j.jid.2023.11.006_bib109","doi-asserted-by":"crossref","first-page":"908","DOI":"10.1038\/s41385-022-00524-9","article-title":"Gut-derived short-chain fatty acids modulate skin barrier integrity by promoting keratinocyte metabolism and differentiation","volume":"15","author":"Trompette","year":"2022","journal-title":"Mucosal Immunol"},{"key":"10.1016\/j.jid.2023.11.006_bib110","doi-asserted-by":"crossref","first-page":"e0056221","DOI":"10.1128\/Spectrum.00562-21","article-title":"Nonpathogenic Cutibacterium acnes confers host resistance against Staphylococcus aureus","volume":"9","author":"Tsuru","year":"2021","journal-title":"Microbiol Spectr"},{"key":"10.1016\/j.jid.2023.11.006_bib111","doi-asserted-by":"crossref","DOI":"10.1128\/msystems.00642-21","article-title":"Archaea are rare and uncommon members of the mammalian skin microbiome","volume":"6","author":"Umbach","year":"2021","journal-title":"mSystems"},{"key":"10.1016\/j.jid.2023.11.006_bib112","doi-asserted-by":"crossref","first-page":"2003","DOI":"10.1016\/j.jid.2016.05.118","article-title":"Thyroid hormones enhance mitochondrial function in human epidermis","volume":"136","author":"Vidali","year":"2016","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib113","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1038\/jid.2013.286","article-title":"Hypothalamic\u2013pituitary\u2013thyroid axis hormones stimulate mitochondrial function and biogenesis in human hair follicles","volume":"134","author":"Vidali","year":"2014","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib114","doi-asserted-by":"crossref","first-page":"2773","DOI":"10.1016\/j.jid.2022.03.017","article-title":"Skin microbiome variation with cancer progression in human cutaneous squamous cell carcinoma","volume":"142","author":"Voigt","year":"2022","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib115","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1186\/s40168-020-00961-3","article-title":"Whole microbial community viability is not quantitatively reflected by propidium monoazide sequencing approach","volume":"9","author":"Wang","year":"2021","journal-title":"Microbiome"},{"key":"10.1016\/j.jid.2023.11.006_bib116","doi-asserted-by":"crossref","first-page":"588","DOI":"10.1111\/exd.14109","article-title":"Getting under the skin of hair aging: the impact of the hair follicle environment","volume":"29","author":"Williams","year":"2020","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib117","doi-asserted-by":"crossref","first-page":"257","DOI":"10.1186\/s13059-019-1891-0","article-title":"Improved metagenomic analysis with Kraken 2","volume":"20","author":"Wood","year":"2019","journal-title":"Genome Biol"},{"key":"10.1016\/j.jid.2023.11.006_bib118","doi-asserted-by":"crossref","DOI":"10.1128\/mSphere.00558-19","article-title":"Age-related variation of bacterial and fungal communities in different body habitats across the young, elderly, and centenarians in Sardinia","volume":"5","author":"Wu","year":"2020","journal-title":"mSphere"},{"key":"10.1016\/j.jid.2023.11.006_bib119","doi-asserted-by":"crossref","first-page":"1446","DOI":"10.1038\/jid.2008.370","article-title":"Highly complex peptide aggregates of the S100 fused-type protein hornerin are present in human skin","volume":"129","author":"Wu","year":"2009","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib120","doi-asserted-by":"crossref","first-page":"236","DOI":"10.1111\/bjd.20750","article-title":"Antimicrobial peptides in hidradenitis suppurativa: a systematic review","volume":"186","author":"Yao","year":"2022","journal-title":"Br J Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib121","doi-asserted-by":"crossref","first-page":"2167","DOI":"10.3390\/cimb44050146","article-title":"Sostdc1 secreted from cutaneous lymphatic vessels acts as a paracrine factor for hair follicle growth","volume":"44","author":"Yoon","year":"2022","journal-title":"Curr Issues Mol Biol"},{"key":"10.1016\/j.jid.2023.11.006_bib122","doi-asserted-by":"crossref","first-page":"64","DOI":"10.4103\/0019-5154.41647","article-title":"Evaluation of the relationship between androgenetic alopecia and demodex infestation","volume":"53","author":"Zari","year":"2008","journal-title":"Indian J Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib123","doi-asserted-by":"crossref","DOI":"10.3389\/fgene.2020.00694","article-title":"LncRNA H19 Overexpression Activates Wnt Signaling to Maintain the Hair Follicle Regeneration Potential of Dermal Papilla Cells","volume":"11","author":"Zhu","year":"2020","journal-title":"Front Genet"},{"key":"10.1016\/j.jid.2023.11.006_bib124","doi-asserted-by":"crossref","first-page":"1440","DOI":"10.1111\/exd.14364","article-title":"Can antibiotic-induced changes in the composition of the hair follicle microbiome regulate human hair growth?","volume":"30","author":"Bispo Lousada","year":"2021","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib139","doi-asserted-by":"crossref","first-page":"1654","DOI":"10.1128\/jcm.30.7.1654-1660.1992","article-title":"Detection of Staphylococcus aureus by polymerase chain reaction amplification of the nuc gene","volume":"30","author":"Brakstad","year":"1992","journal-title":"J Clin Microbiol"},{"key":"10.1016\/j.jid.2023.11.006_bib140","doi-asserted-by":"crossref","first-page":"363","DOI":"10.1111\/ics.12783","article-title":"An extract of Leontopodium alpinum inhibits catagen development ex vivo and increases hair density in vivo","volume":"44","author":"Campiche","year":"2022","journal-title":"Int J Cosmet Sci"},{"key":"10.1016\/j.jid.2023.11.006_bib141","doi-asserted-by":"crossref","first-page":"20","DOI":"10.1186\/s12951-020-00757-5","article-title":"Neural progenitor cell-derived nanovesicles promote hair follicle growth via miR-100","volume":"19","author":"Cao","year":"2021","journal-title":"J. Nanobiotechnology"},{"key":"10.1016\/j.jid.2023.11.006_bib125","doi-asserted-by":"crossref","first-page":"3624","DOI":"10.1038\/s41467-018-05973-0","article-title":"Olfactory receptor OR2AT4 regulates human hair growth","volume":"9","author":"Ch\u00e9ret","year":"2018","journal-title":"Nat Commun"},{"key":"10.1016\/j.jid.2023.11.006_bib142","first-page":"288","article-title":"Is endogenous glycerol a determinant of stratum corneum hydration in humans?","volume":"20","author":"Choi","year":"2005","journal-title":"J Gen Intern Med"},{"key":"10.1016\/j.jid.2023.11.006_bib126","doi-asserted-by":"crossref","first-page":"960488","DOI":"10.3389\/fimmu.2022.960488","article-title":"Innate immunity and microbial dysbiosis in hidradenitis suppurativa \u2013 vicious cycle of chronic inflammation","volume":"13","author":"Chopra","year":"2022","journal-title":"Front Immunol"},{"key":"10.1016\/j.jid.2023.11.006_bib143","doi-asserted-by":"crossref","first-page":"152","DOI":"10.1186\/s12864-016-2489-5","article-title":"Antagonism between Staphylococcus epidermidis and Propionibacterium acnes and its genomic basis","volume":"17","author":"Christensen","year":"2016","journal-title":"BMC Genomics"},{"key":"10.1016\/j.jid.2023.11.006_bib144","doi-asserted-by":"crossref","first-page":"287","DOI":"10.1159\/000499858","article-title":"Staphylococcus epidermidis: a potential new player in the physiopathology of acne?","volume":"235","author":"Claudel","year":"2019","journal-title":"Dermatology"},{"key":"10.1016\/j.jid.2023.11.006_bib127","doi-asserted-by":"crossref","first-page":"20761","DOI":"10.1038\/s41598-021-99652-8","article-title":"Human hair follicles operate an internal Cori cycle and modulate their growth via glycogen phosphorylase","volume":"11","author":"Figlak","year":"2021","journal-title":"Sci Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib145","doi-asserted-by":"crossref","first-page":"855","DOI":"10.1111\/j.1365-2362.2012.02659.x","article-title":"Assessment of the human fecal microbiota: II. Reproducibility and associations of 16S rRNA pyrosequences","volume":"42","author":"Flores","year":"2012","journal-title":"Eur J Clin Invest"},{"key":"10.1016\/j.jid.2023.11.006_bib146","doi-asserted-by":"crossref","first-page":"728","DOI":"10.1046\/j.1523-1747.2003.12134.x","article-title":"Glycerol regulates stratum corneum hydration in sebaceous gland deficient (asebia) mice","volume":"120","author":"Fluhr","year":"2003","journal-title":"J Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib128","doi-asserted-by":"crossref","DOI":"10.3390\/microorganisms8111752","article-title":"Staphylococcus epidermidis and Cutibacterium acnes: two Major Sentinels of Skin microbiota and the Influence of Cosmetics","volume":"8","author":"Fourni\u00e8re","year":"2020","journal-title":"Microorganisms"},{"key":"10.1016\/j.jid.2023.11.006_bib129","doi-asserted-by":"crossref","first-page":"1053","DOI":"10.1038\/jid.2014.442","article-title":"The peripheral clock regulates human pigmentation","volume":"135","author":"Hardman","year":"2015","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib130","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0216330","article-title":"Microbiome in the hair follicle of androgenetic alopecia patients","volume":"14","author":"Ho","year":"2019","journal-title":"PloS One"},{"key":"10.1016\/j.jid.2023.11.006_bib147","series-title":"Androgenetic Alopecia. StatPearls. Treasure Island (FL)","author":"Ho","year":"2022"},{"key":"10.1016\/j.jid.2023.11.006_bib148","doi-asserted-by":"crossref","first-page":"1542","DOI":"10.3390\/ijms21041542","article-title":"Acetate and butyrate improve \u03b2-cell metabolism and mitochondrial respiration under oxidative stress","volume":"21","author":"Hu","year":"2020","journal-title":"Int J Mol Sci"},{"key":"10.1016\/j.jid.2023.11.006_bib149","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0218924","article-title":"Applicability of propidium monoazide (PMA) for discrimination between living and dead phytoplankton cells","volume":"14","author":"Joo","year":"2019","journal-title":"PLoS One"},{"key":"10.1016\/j.jid.2023.11.006_bib150","doi-asserted-by":"crossref","first-page":"639","DOI":"10.1038\/s41586-022-05546-8","article-title":"Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies","volume":"613","author":"Kennedy","year":"2023","journal-title":"Nature"},{"key":"10.1016\/j.jid.2023.11.006_bib131","doi-asserted-by":"crossref","first-page":"2351","DOI":"10.1038\/s41598-022-06189-5","article-title":"Aged related human skin microbiome and mycobiome in Korean women","volume":"12","author":"Kim","year":"2022","journal-title":"Sci Rep"},{"key":"10.1016\/j.jid.2023.11.006_bib151","doi-asserted-by":"crossref","DOI":"10.1080\/19490976.2022.2149019","article-title":"Predicting butyrate- and propionate-forming bacteria of gut microbiota from sequencing data","volume":"14","author":"Kircher","year":"2022","journal-title":"Gut Microbes"},{"key":"10.1016\/j.jid.2023.11.006_bib132","doi-asserted-by":"crossref","first-page":"305","DOI":"10.1111\/j.1600-0625.2009.00939.x","article-title":"Methods in hair research: how to objectively distinguish between anagen and catagen in human hair follicle organ culture","volume":"19","author":"Kloepper","year":"2010","journal-title":"Exp Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib152","doi-asserted-by":"crossref","first-page":"219","DOI":"10.1111\/bjd.19477","article-title":"Reviewing the global burden of acne: how could we improve care to reduce the burden?","volume":"184","author":"Layton","year":"2021","journal-title":"Br J Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib153","doi-asserted-by":"crossref","DOI":"10.3389\/fcimb.2022.794323","article-title":"A novel propidium monoazide-based pcr assay can measure viable uropathogenic E. coli in vitro and in vivo","volume":"12","author":"Lee","year":"2022","journal-title":"Front Cell Infect. Microbiol"},{"issue":"Suppl 1","key":"10.1016\/j.jid.2023.11.006_bib154","doi-asserted-by":"crossref","first-page":"12","DOI":"10.1007\/s40257-020-00549-5","article-title":"Skin microbiome as years go by","volume":"21","author":"Luna","year":"2020","journal-title":"Am J Clin Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib155","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2021.749373","article-title":"Free DNA and Metagenomics Analyses: Evaluation of Free DNA Inactivation Protocols for Shotgun Metagenomics Analysis of Human Biological Matrices","volume":"12","author":"Mancabelli","year":"2021","journal-title":"Front Microbiol"},{"key":"10.1016\/j.jid.2023.11.006_bib156","doi-asserted-by":"crossref","first-page":"326","DOI":"10.1128\/JCM.43.1.326-334.2005","article-title":"Propionibacterium acnes types I and II represent phylogenetically distinct groups","volume":"43","author":"McDowell","year":"2005","journal-title":"J Clin Microbiol"},{"key":"10.1016\/j.jid.2023.11.006_bib157","doi-asserted-by":"crossref","first-page":"1414","DOI":"10.3390\/ijms22031414","article-title":"Probiotic Activity of Staphylococcus epidermidis Induces Collagen Type I Production through FFaR2\/p-ERK Signaling","volume":"22","author":"Negari","year":"2021","journal-title":"Int J Mol Sci"},{"key":"10.1016\/j.jid.2023.11.006_bib158","doi-asserted-by":"crossref","first-page":"212","DOI":"10.1016\/j.jid.2021.04.034","article-title":"Shifts in the Skin Bacterial and Fungal Communities of Healthy Children Transitioning through Puberty","volume":"142","author":"Park","year":"2022","journal-title":"J Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib133","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pbio.2002864","article-title":"Autophagy is essential for maintaining the growth of a human (mini-)organ: evidence from scalp hair follicle organ culture","volume":"16","author":"Parodi","year":"2018","journal-title":"PLoS Biol"},{"key":"10.1016\/j.jid.2023.11.006_bib159","doi-asserted-by":"crossref","first-page":"1105","DOI":"10.3390\/ijms23031105","article-title":"Gut Microbiota and Short Chain Fatty Acids: Implications in Glucose Homeostasis","volume":"23","author":"Portincasa","year":"2022","journal-title":"Int J Mol Sci"},{"key":"10.1016\/j.jid.2023.11.006_bib160","doi-asserted-by":"crossref","first-page":"1767","DOI":"10.4049\/jimmunol.1800893","article-title":"Short-chain fatty acids from Cutibacterium acnes activate both a canonical and epigenetic inflammatory response in human sebocytes","volume":"202","author":"Sanford","year":"2019","journal-title":"J Immunol"},{"key":"10.1016\/j.jid.2023.11.006_bib161","doi-asserted-by":"crossref","first-page":"676","DOI":"10.1038\/nmeth.2019","article-title":"Fiji: an open-source platform for biological-image analysis","volume":"9","author":"Schindelin","year":"2012","journal-title":"Nat Methods. Nature Publishing Group"},{"key":"10.1016\/j.jid.2023.11.006_bib162","doi-asserted-by":"crossref","DOI":"10.3390\/ijms231911280","article-title":"Microbiome in hidradenitis suppurativa\u2014what we know and where we are heading","volume":"23","author":"\u015awierczewska","year":"2022","journal-title":"Int J Mol Sci"},{"key":"10.1016\/j.jid.2023.11.006_bib163","doi-asserted-by":"crossref","first-page":"e01665","DOI":"10.1128\/AEM.01665-20","article-title":"Fatty acid and alcohol metabolism in pseudomonas putida: functional analysis using random barcode transposon sequencing","volume":"86","author":"Thompson","year":"2020","journal-title":"Appl Environ Microbiol"},{"key":"10.1016\/j.jid.2023.11.006_bib134","doi-asserted-by":"crossref","first-page":"311","DOI":"10.3390\/toxins11060311","article-title":"A\u00a0derivative of butyric acid, the fermentation metabolite of Staphylococcus epidermidis, inhibits the growth of a Staphylococcus aureus Strain isolated from atopic dermatitis patients","volume":"11","author":"Traisaeng","year":"2019","journal-title":"Toxins (Basel)"},{"key":"10.1016\/j.jid.2023.11.006_bib135","doi-asserted-by":"crossref","first-page":"908","DOI":"10.1038\/s41385-022-00524-9","article-title":"Gut-derived short-chain fatty acids modulate skin barrier integrity by promoting keratinocyte metabolism and differentiation","volume":"15","author":"Trompette","year":"2022","journal-title":"Mucosal Immunol"},{"key":"10.1016\/j.jid.2023.11.006_bib136","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1038\/jid.2013.286","article-title":"Hypothalamic\u2013pituitary\u2013thyroid axis hormones stimulate mitochondrial function and biogenesis in human hair follicles","volume":"134","author":"Vidali","year":"2014","journal-title":"J\u00a0Invest Dermatol"},{"key":"10.1016\/j.jid.2023.11.006_bib137","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1186\/s40168-020-00961-3","article-title":"Whole microbial community viability is not quantitatively reflected by propidium monoazide sequencing approach","volume":"9","author":"Wang","year":"2021","journal-title":"Microbiome"},{"key":"10.1016\/j.jid.2023.11.006_bib164","doi-asserted-by":"crossref","first-page":"39","DOI":"10.1007\/s13555-020-00465-w","article-title":"The microbiome in hidradenitis suppurativa: a review","volume":"11","author":"Wark","year":"2021","journal-title":"Dermatol Ther. Springer"},{"key":"10.1016\/j.jid.2023.11.006_bib165","doi-asserted-by":"crossref","first-page":"159","DOI":"10.1016\/j.tem.2020.12.003","article-title":"Butyrate in energy metabolism: there is still more to learn","volume":"32","author":"Zhang","year":"2021","journal-title":"Trends Endocrinol Metab. TEM"},{"key":"10.1016\/j.jid.2023.11.006_bib166","doi-asserted-by":"crossref","DOI":"10.1016\/j.brainres.2021.147749","article-title":"Sodium butyrate attenuates rotenone-induced toxicity by activation of autophagy through epigenetically regulating PGC-1\u03b1 expression in PC12 cells","volume":"1776","author":"Zhang","year":"2022","journal-title":"Brain Res"}],"container-title":["Journal of Investigative Dermatology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0022202X23031196?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0022202X23031196?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,11,3]],"date-time":"2025-11-03T21:53:46Z","timestamp":1762206826000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0022202X23031196"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,6]]},"references-count":166,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2024,6]]}},"alternative-id":["S0022202X23031196"],"URL":"https:\/\/doi.org\/10.1016\/j.jid.2023.11.006","relation":{},"ISSN":["0022-202X"],"issn-type":[{"value":"0022-202X","type":"print"}],"subject":[],"published":{"date-parts":[[2024,6]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Spatial Distribution and Functional Impact of Human Scalp Hair Follicle Microbiota","name":"articletitle","label":"Article Title"},{"value":"Journal of Investigative Dermatology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.jid.2023.11.006","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2023 The Authors. Published by Elsevier, Inc. on behalf of the Society for Investigative Dermatology.","name":"copyright","label":"Copyright"}]}}