{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,14]],"date-time":"2026-05-14T06:30:35Z","timestamp":1778740235444,"version":"3.51.4"},"reference-count":26,"publisher":"Elsevier BV","issue":"3","license":[{"start":{"date-parts":[[2026,3,1]],"date-time":"2026-03-01T00:00:00Z","timestamp":1772323200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,3,1]],"date-time":"2026-03-01T00:00:00Z","timestamp":1772323200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,12,22]],"date-time":"2025-12-22T00:00:00Z","timestamp":1766361600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0\/"}],"content-domain":{"domain":["clinicalkey.com","clinicalkey.com.au","clinicalkey.es","clinicalkey.fr","clinicalkey.jp","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Journal of Infection and Public Health"],"published-print":{"date-parts":[[2026,3]]},"DOI":"10.1016\/j.jiph.2025.103117","type":"journal-article","created":{"date-parts":[[2025,12,30]],"date-time":"2025-12-30T15:54:35Z","timestamp":1767110075000},"page":"103117","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":1,"title":["Integrated computational analysis for Escherichia coli prevalence, genetic evolution, and antimicrobial resistance evolution: Implications for public health and environmental sustainability in Asia"],"prefix":"10.1016","volume":"19","author":[{"given":"Ashwini","family":"Mallappa","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Kuralayanapalya Puttahonnappa","family":"Suresh","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3291-7513","authenticated-orcid":false,"given":"Sharanagouda S.","family":"Patil","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shivasharanappa","family":"Nayakvadi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Baldev Raj","family":"Gulati","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9689-1124","authenticated-orcid":false,"given":"Raghavendra G.","family":"Amachawadi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sudarshan Peramachanahalli","family":"Venkatesh","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yamini Sri","family":"Sekar","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Archana Veeranagouda","family":"Patil","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"issue":"2","key":"10.1016\/j.jiph.2025.103117_bib1","doi-asserted-by":"crossref","first-page":"123","DOI":"10.1038\/nrmicro818","article-title":"Pathogenic Escherichia coli","volume":"2","author":"Kaper","year":"2004","journal-title":"Nat Rev Microbiol"},{"key":"10.1016\/j.jiph.2025.103117_bib2","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/1476-0711-6-4","article-title":"Etiology and antibiotic resistance patterns of community-acquired urinary tract infections in JNMC Hospital Aligarh, India","volume":"6","author":"Akram","year":"2007","journal-title":"Ann Clin Microbiol Antimicrob"},{"issue":"1","key":"10.1016\/j.jiph.2025.103117_bib3","doi-asserted-by":"crossref","first-page":"830","DOI":"10.53350\/pjmhs22161830","article-title":"Multi-drug resistance of Escherichia coli isolated from clinical isolates in District Peshawar, KP Pakistan","volume":"16","author":"Haq","year":"2022","journal-title":"Pak J Med Health Sci"},{"issue":"12","key":"10.1016\/j.jiph.2025.103117_bib4","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1371\/journal.pmed.1001923","article-title":"World Health Organization global estimates and regional comparisons of the burden of foodborne disease in 2010","volume":"12","author":"Havelaar","year":"2015","journal-title":"PLoS Med"},{"issue":"7","key":"10.1016\/j.jiph.2025.103117_bib5","doi-asserted-by":"crossref","first-page":"1211","DOI":"10.1093\/cid\/ciaa210","article-title":"Epidemiology of Escherichia coli bacteremia: a systematic literature review","volume":"72","author":"Bonten","year":"2021","journal-title":"Clin Infect Dis"},{"issue":"9","key":"10.1016\/j.jiph.2025.103117_bib6","doi-asserted-by":"crossref","first-page":"942","DOI":"10.1016\/j.jiph.2022.07.010","article-title":"Prevalence of Japanese encephalitis virus in mosquitoes and animals of the Asian continent: a systematic review and meta-analysis","volume":"15","author":"Suresh","year":"2022","journal-title":"J Infect Public Health"},{"issue":"8","key":"10.1016\/j.jiph.2025.103117_bib7","first-page":"1177","article-title":"Preferred reporting items for systematic review and meta-analysis protocols (PRISMA-P) 2015 statement","volume":"47","author":"Kamioka","year":"2019","journal-title":"Jpn Pharm Ther"},{"key":"10.1016\/j.jiph.2025.103117_bib8","first-page":"248","article-title":"Likelihood modelling: meta-analysis\u2014formulating, evaluating, combining, and reporting","volume":"2","author":"Normand","year":"2005","journal-title":"Tutor Biostat"},{"key":"10.1016\/j.jiph.2025.103117_bib9","doi-asserted-by":"crossref","DOI":"10.3389\/fvets.2022.923657","article-title":"Prevalence of brucellosis in livestock of African and Asian continents: a systematic review and meta-analysis","volume":"9","author":"Suresh","year":"2022","journal-title":"Front Vet Sci"},{"issue":"5","key":"10.1016\/j.jiph.2025.103117_bib10","doi-asserted-by":"crossref","first-page":"1263","DOI":"10.14202\/vetworld.2021.1263-1271","article-title":"An estimate of global anthrax prevalence in livestock: a meta-analysis","volume":"14","author":"Sushma","year":"2021","journal-title":"Vet World"},{"issue":"8","key":"10.1016\/j.jiph.2025.103117_bib11","doi-asserted-by":"crossref","first-page":"1557","DOI":"10.1017\/S0950268817000474","article-title":"Nationwide investigation of Shiga toxin\u2013producing Escherichia coli among cattle in Japan revealed risk factors and potentially virulent subgroups","volume":"145","author":"Lee","year":"2017","journal-title":"Epidemiol Infect"},{"key":"10.1016\/j.jiph.2025.103117_bib12","doi-asserted-by":"crossref","DOI":"10.1007\/s11262-025-02154-2","article-title":"Global population dynamics and evolutionary selection in classical swine fever virus complete genomes: insights from Bayesian coalescent analysis","author":"Mahadevaswamy","year":"2025","journal-title":"Virus Genes"},{"key":"10.1016\/j.jiph.2025.103117_bib13","doi-asserted-by":"crossref","first-page":"7","DOI":"10.1016\/j.smallrumres.2018.02.008","article-title":"Detection and molecular characterization of sorbitol-fermenting non-O157 Escherichia coli from goats","volume":"161","author":"Nayakvadi","year":"2018","journal-title":"Small Rumin Res"},{"issue":"1","key":"10.1016\/j.jiph.2025.103117_bib14","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/s12866-020-01899-0","article-title":"Occurrence, virulence genes, and antimicrobial profiles of Escherichia coli O157 isolated from ruminants slaughtered in Al Ain, UAE","volume":"20","author":"Al-Ajmi","year":"2020","journal-title":"BMC Microbiol"},{"issue":"1","key":"10.1016\/j.jiph.2025.103117_bib15","first-page":"88","article-title":"Prevalence of enteropathogenic and Shiga toxin\u2013producing Escherichia coli among children with and without diarrhoea in Iran","volume":"25","author":"Alikhani","year":"2007","journal-title":"J Health Popul Nutr"},{"key":"10.1016\/j.jiph.2025.103117_bib16","doi-asserted-by":"crossref","DOI":"10.1155\/2022\/7234586","article-title":"Isolation, identification, characterisation, and plasmid profile of urinary tract infectious Escherichia coli from clinical samples","volume":"2022","author":"Thangavelu","year":"2022","journal-title":"Evid Based Complement Altern Med"},{"issue":"2","key":"10.1016\/j.jiph.2025.103117_bib17","doi-asserted-by":"crossref","first-page":"e136","DOI":"10.1016\/j.ijid.2010.10.002","article-title":"Characterisation of enteroaggregative Escherichia coli clinical isolates and their antibiotic resistance pattern","volume":"15","author":"Aslani","year":"2011","journal-title":"Int J Infect Dis"},{"issue":"4","key":"10.1016\/j.jiph.2025.103117_bib18","doi-asserted-by":"crossref","first-page":"332","DOI":"10.1099\/0022-1317-51-4-332","article-title":"Isolation and characterisation of Shiga toxigenic Escherichia coli strains from northern Palestine","volume":"51","author":"Adwan","year":"2002","journal-title":"J Med Microbiol"},{"issue":"11","key":"10.1016\/j.jiph.2025.103117_bib19","doi-asserted-by":"crossref","first-page":"2115","DOI":"10.1007\/s11274-013-1376-3","article-title":"Prevalence of Escherichia coli in surface waters of Southeast Asian cities","volume":"29","author":"Widmer","year":"2013","journal-title":"World J Microbiol Biotechnol"},{"key":"10.1016\/j.jiph.2025.103117_bib20","doi-asserted-by":"crossref","first-page":"94","DOI":"10.1016\/j.jgar.2019.12.016","article-title":"Prevalence and antimicrobial-resistance phenotypes and genotypes of Escherichia coli isolated from raw milk mastitis cases in China","volume":"22","author":"Yu","year":"2020","journal-title":"J Glob Antimicrob Resist"},{"key":"10.1016\/j.jiph.2025.103117_bib21","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1155\/2015\/274607","article-title":"Reduced serum butyrylcholinesterase activity indicates severe systemic inflammation in critically ill patients","volume":"2015","author":"Zivkovic","year":"2015","journal-title":"Mediat Inflamm"},{"issue":"3","key":"10.1016\/j.jiph.2025.103117_bib22","doi-asserted-by":"crossref","first-page":"483","DOI":"10.1016\/j.tvjl.2011.06.038","article-title":"Serotypes and virulence genes of extraintestinal pathogenic Escherichia coli isolates from diseased pigs in China","volume":"192","author":"Tan","year":"2012","journal-title":"Vet J"},{"issue":"5","key":"10.1016\/j.jiph.2025.103117_bib23","doi-asserted-by":"crossref","first-page":"375","DOI":"10.1016\/S2222-1808(12)60082-6","article-title":"Retrospective study of antibiotic resistance among uropathogens from a rural teaching hospital, Tamil Nadu, India","volume":"2","author":"Murugan","year":"2012","journal-title":"Asian Pac J Trop Dis"},{"issue":"5","key":"10.1016\/j.jiph.2025.103117_bib24","doi-asserted-by":"crossref","first-page":"391","DOI":"10.3904\/kjm.2019.94.5.391","article-title":"Strengths and limitations of meta-analysis","volume":"94","author":"Lee","year":"2019","journal-title":"Korean J Med"},{"key":"10.1016\/j.jiph.2025.103117_bib25","unstructured":"iTOL: Interactive Tree of Life. Available at: \u3008https:\/\/itol.embl.de\/\u3009. Accessed 10 December 2025."},{"issue":"3","key":"10.1016\/j.jiph.2025.103117_bib26","first-page":"512","article-title":"Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA","volume":"10","author":"Tamura","year":"1993","journal-title":"Mol Biol Evol"}],"container-title":["Journal of Infection and Public Health"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1876034125004666?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1876034125004666?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,2,10]],"date-time":"2026-02-10T08:29:51Z","timestamp":1770712191000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1876034125004666"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,3]]},"references-count":26,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2026,3]]}},"alternative-id":["S1876034125004666"],"URL":"https:\/\/doi.org\/10.1016\/j.jiph.2025.103117","relation":{},"ISSN":["1876-0341"],"issn-type":[{"value":"1876-0341","type":"print"}],"subject":[],"published":{"date-parts":[[2026,3]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Integrated computational analysis for Escherichia coli prevalence, genetic evolution, and antimicrobial resistance evolution: Implications for public health and environmental sustainability in Asia","name":"articletitle","label":"Article Title"},{"value":"Journal of Infection and Public Health","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.jiph.2025.103117","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 The Author(s). Published by Elsevier Ltd on behalf of King Saud Bin Abdulaziz University for Health Sciences.","name":"copyright","label":"Copyright"}],"article-number":"103117"}}