{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,6]],"date-time":"2026-10-06T01:21:18Z","timestamp":1791249678980,"version":"4.1.0"},"reference-count":59,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,3,1]],"date-time":"2025-03-01T00:00:00Z","timestamp":1740787200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Journal of Molecular Graphics and Modelling"],"published-print":{"date-parts":[[2025,3]]},"DOI":"10.1016\/j.jmgm.2024.108927","type":"journal-article","created":{"date-parts":[[2024,12,28]],"date-time":"2024-12-28T16:19:15Z","timestamp":1735402755000},"page":"108927","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":4,"special_numbering":"C","title":["Structural characterization of codon 129 polymorphism in prion peptide segments (PrP127-132) using the Markov State Models"],"prefix":"10.1016","volume":"135","author":[{"ORCID":"https:\/\/orcid.org\/0009-0001-9235-3385","authenticated-orcid":false,"given":"Wycliffe","family":"Omwansu","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Robinson","family":"Musembi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Solomon","family":"Derese","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"issue":"7","key":"10.1016\/j.jmgm.2024.108927_b1","doi-asserted-by":"crossref","first-page":"405","DOI":"10.1038\/s41576-018-0011-4","article-title":"Prions, prionoids and protein misfolding disorders","volume":"19","author":"Scheckel","year":"2018","journal-title":"Nature Rev. Genet."},{"issue":"2","key":"10.1016\/j.jmgm.2024.108927_b2","doi-asserted-by":"crossref","first-page":"286","DOI":"10.1212\/01.wnl.0000196440.00297.67","article-title":"First symptom in sporadic Creutzfeldt\u2013Jakob disease","volume":"66","author":"Rabinovici","year":"2006","journal-title":"Neurology"},{"issue":"2","key":"10.1016\/j.jmgm.2024.108927_b3","doi-asserted-by":"crossref","first-page":"174","DOI":"10.1111\/neup.12355","article-title":"Creutzfeldt-jakob disease","volume":"37","author":"Iwasaki","year":"2017","journal-title":"Neuropathology"},{"issue":"1","key":"10.1016\/j.jmgm.2024.108927_b4","doi-asserted-by":"crossref","first-page":"113","DOI":"10.1007\/s00441-022-03665-2","article-title":"Prion strains: shining new light on old concepts","volume":"392","author":"Block","year":"2023","journal-title":"Cell Tissue Res."},{"issue":"20","key":"10.1016\/j.jmgm.2024.108927_b5","doi-asserted-by":"crossref","first-page":"1516","DOI":"10.1056\/NEJM200105173442006","article-title":"Neurodegenerative diseases and prions","volume":"344","author":"Prusiner","year":"2001","journal-title":"N. Engl. J. Med."},{"issue":"11","key":"10.1016\/j.jmgm.2024.108927_b6","doi-asserted-by":"crossref","first-page":"1567","DOI":"10.1007\/s00415-002-0896-9","article-title":"Mutations of the prion protein gene","volume":"249","author":"Kov\u00e1cs","year":"2002","journal-title":"J. Neurol."},{"issue":"1","key":"10.1016\/j.jmgm.2024.108927_b7","doi-asserted-by":"crossref","first-page":"311","DOI":"10.1146\/annurev.ne.17.030194.001523","article-title":"Prion diseases and neurodegeneration","volume":"17","author":"Prusiner","year":"1994","journal-title":"Annual Rev. Neurosci."},{"issue":"12","key":"10.1016\/j.jmgm.2024.108927_b8","doi-asserted-by":"crossref","first-page":"2055","DOI":"10.1002\/pro.3735","article-title":"Transition of the prion protein from a structured cellular form (PrPC) to the infectious scrapie agent (PrPSc)","volume":"28","author":"Baral","year":"2019","journal-title":"Prot. Sci."},{"issue":"1","key":"10.1016\/j.jmgm.2024.108927_b9","doi-asserted-by":"crossref","first-page":"50","DOI":"10.26452\/ijrps.v13i1.19","article-title":"The review on:Creutzfeldt-jakob disease","volume":"13","author":"Jadhav","year":"2022","journal-title":"Int. J. Res. Pharmaceut. Sci."},{"issue":"1","key":"10.1016\/j.jmgm.2024.108927_b10","doi-asserted-by":"crossref","first-page":"89","DOI":"10.1080\/09687860500449994","article-title":"The prion protein and lipid rafts","volume":"23","author":"Taylor","year":"2006","journal-title":"Molecular Membrane Biol."},{"issue":"1","key":"10.1016\/j.jmgm.2024.108927_b11","doi-asserted-by":"crossref","first-page":"21","DOI":"10.1093\/bmb\/66.1.21","article-title":"Biochemistry and structure of PrPC and PrPSc","volume":"66","author":"Riesner","year":"2003","journal-title":"Br. Med. Bull."},{"issue":"2","key":"10.1016\/j.jmgm.2024.108927_b12","doi-asserted-by":"crossref","first-page":"673","DOI":"10.1152\/physrev.00007.2007","article-title":"Physiology of the prion protein","volume":"88","author":"Linden","year":"2008","journal-title":"Physiol. Rev."},{"issue":"4","key":"10.1016\/j.jmgm.2024.108927_b13","doi-asserted-by":"crossref","first-page":"1284","DOI":"10.1529\/biophysj.107.108613","article-title":"Structural and hydration properties of the partially unfolded states of the prion protein","volume":"93","author":"De Simone","year":"2007","journal-title":"Biophys. J."},{"issue":"4","key":"10.1016\/j.jmgm.2024.108927_b14","doi-asserted-by":"crossref","first-page":"187","DOI":"10.1097\/GIM.0b013e3181cd7374","article-title":"The genetics of prion diseases","volume":"12","author":"Mastrianni","year":"2010","journal-title":"Genet. Med."},{"issue":"7","key":"10.1016\/j.jmgm.2024.108927_b15","doi-asserted-by":"crossref","first-page":"779","DOI":"10.1136\/jnnp-2021-328720","article-title":"Methionine homozygosity for PRNP polymorphism and susceptibility to human prion diseases","volume":"93","author":"Kosami","year":"2022","journal-title":"J. Neurol. Neurosurgery Psychiatry"},{"key":"10.1016\/j.jmgm.2024.108927_b16","doi-asserted-by":"crossref","first-page":"159","DOI":"10.1007\/s00401-015-1447-7","article-title":"The influence of PRNP polymorphisms on human prion disease susceptibility: an update","volume":"130","author":"Kobayashi","year":"2015","journal-title":"Acta Neuropathol."},{"issue":"6602","key":"10.1016\/j.jmgm.2024.108927_b17","doi-asserted-by":"crossref","first-page":"685","DOI":"10.1038\/383685a0","article-title":"Molecular analysis of prion strain variation and the aetiology of\u2018new variant\u2019CJD","volume":"383","author":"Collinge","year":"1996","journal-title":"Nature"},{"issue":"1","key":"10.1016\/j.jmgm.2024.108927_b18","doi-asserted-by":"crossref","first-page":"fcaa030","DOI":"10.1093\/braincomms\/fcaa030","article-title":"Prion protein codon 129 polymorphism in mild cognitive impairment and dementia: the rotterdam study","volume":"2","author":"Karamuji\u0107-C\u01d2mi\u0107","year":"2020","journal-title":"Brain Commun."},{"issue":"7","key":"10.1016\/j.jmgm.2024.108927_b19","doi-asserted-by":"crossref","first-page":"693","DOI":"10.1002\/mc.20642","article-title":"Prion protein expression and the M129V polymorphism of the PRNP gene in patients with colorectal cancer","volume":"49","author":"Antonacopoulou","year":"2010","journal-title":"Molecular Carcinogenes."},{"issue":"2","key":"10.1016\/j.jmgm.2024.108927_b20","doi-asserted-by":"crossref","first-page":"224","DOI":"10.1002\/1531-8249(199908)46:2<224::AID-ANA12>3.0.CO;2-W","article-title":"Classification of sporadic Creutzfeldt-Jakob disease based on molecular and phenotypic analysis of 300 subjects","volume":"46","author":"Parchi","year":"1999","journal-title":"Ann. Neurol."},{"issue":"1","key":"10.1016\/j.jmgm.2024.108927_b21","doi-asserted-by":"crossref","first-page":"402","DOI":"10.1038\/s42003-020-01126-6","article-title":"Structural effects of the highly protective V127 polymorphism on human prion protein","volume":"3","author":"Hosszu","year":"2020","journal-title":"Commun. Biol."},{"key":"10.1016\/j.jmgm.2024.108927_b22","doi-asserted-by":"crossref","unstructured":"M. Sanz-Hern\u00e1ndez, J.D. Barritt, J. Sobek, S. Hornemann, A. Aguzzi, A. De Simone, Mechanism of misfolding of the human prion protein revealed by a pathological mutation, Proc. Natl. Acad. Sci. 118 (12).","DOI":"10.1073\/pnas.2019631118"},{"issue":"30","key":"10.1016\/j.jmgm.2024.108927_b23","doi-asserted-by":"crossref","first-page":"31390","DOI":"10.1074\/jbc.M401754200","article-title":"Methionine 129 variant of human prion protein oligomerizes more rapidly than the valine 129 variant: implications for disease susceptibility to creutzfeldt-jakob disease","volume":"279","author":"Tahiri-Alaoui","year":"2004","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.jmgm.2024.108927_b24","first-page":"1","article-title":"A structural basis for prion strain diversity","author":"Manka","year":"2023","journal-title":"Nat. Chem. Biol."},{"issue":"36","key":"10.1016\/j.jmgm.2024.108927_b25","doi-asserted-by":"crossref","first-page":"9617","DOI":"10.1073\/pnas.1712155114","article-title":"Prion protein \u03b2 2\u2013\u03b1 2 loop conformational landscape","volume":"114","author":"Caldarulo","year":"2017","journal-title":"Proc. Natl. Acad. Sci."},{"issue":"39","key":"10.1016\/j.jmgm.2024.108927_b26","doi-asserted-by":"crossref","first-page":"29671","DOI":"10.1074\/jbc.C110.158303","article-title":"Crystallographic studies of prion protein (PrP) segments suggest how structural changes encoded by polymorphism at residue 129 modulate susceptibility to human prion disease","volume":"285","author":"Apostol","year":"2010","journal-title":"J. Biol. Chem."},{"issue":"16","key":"10.1016\/j.jmgm.2024.108927_b27","doi-asserted-by":"crossref","first-page":"1701","DOI":"10.1002\/jcc.20291","article-title":"GROMACS: fast, flexible, and free","volume":"26","author":"Van Der Spoel","year":"2005","journal-title":"J. Comput. Chem."},{"issue":"1","key":"10.1016\/j.jmgm.2024.108927_b28","doi-asserted-by":"crossref","first-page":"71","DOI":"10.1038\/nmeth.4067","article-title":"CHARMM36 m: an improved force field for folded and intrinsically disordered proteins","volume":"14","author":"Huang","year":"2017","journal-title":"Nat. Methods"},{"issue":"21","key":"10.1016\/j.jmgm.2024.108927_b29","doi-asserted-by":"crossref","first-page":"E4758","DOI":"10.1073\/pnas.1800690115","article-title":"Developing a molecular dynamics force field for both folded and disordered protein states","volume":"115","author":"Robustelli","year":"2018","journal-title":"Proc. Natl. Acad. Sci."},{"issue":"11","key":"10.1016\/j.jmgm.2024.108927_b30","doi-asserted-by":"crossref","first-page":"6063","DOI":"10.1021\/acs.jctc.8b00579","article-title":"On the applicability of force fields to study the aggregation of amyloidogenic peptides using molecular dynamics simulations","volume":"14","author":"Carballo-Pacheco","year":"2018","journal-title":"J. Chem. Theory Comput."},{"issue":"2","key":"10.1016\/j.jmgm.2024.108927_b31","doi-asserted-by":"crossref","first-page":"497","DOI":"10.1039\/C0MB00210K","article-title":"Clarifying the influence of core amino acid hydrophobicity, secondary structure propensity, and molecular volume on amyloid-\u03b2 16\u201322 self-assembly","volume":"7","author":"Senguen","year":"2011","journal-title":"Mol. Biosyst."},{"issue":"43","key":"10.1016\/j.jmgm.2024.108927_b32","doi-asserted-by":"crossref","first-page":"9954","DOI":"10.1021\/jp003020w","article-title":"Structure and dynamics of the TIP3p, SPC, and SPC\/E water models at 298 K","volume":"105","author":"Mark","year":"2001","journal-title":"J. Phys. Chem. A"},{"issue":"12","key":"10.1016\/j.jmgm.2024.108927_b33","doi-asserted-by":"crossref","first-page":"1463","DOI":"10.1002\/(SICI)1096-987X(199709)18:12<1463::AID-JCC4>3.0.CO;2-H","article-title":"LINCS: A linear constraint solver for molecular simulations","volume":"18","author":"Hess","year":"1997","journal-title":"J. Comput. Chem."},{"issue":"5","key":"10.1016\/j.jmgm.2024.108927_b34","doi-asserted-by":"crossref","first-page":"2348","DOI":"10.1063\/1.1385159","article-title":"Efficient multiple time step method for use with ewald and particle mesh ewald for large biomolecular systems","volume":"115","author":"Zhou","year":"2001","journal-title":"J. Chem. Phys."},{"issue":"3","key":"10.1016\/j.jmgm.2024.108927_b35","doi-asserted-by":"crossref","first-page":"177","DOI":"10.1080\/08927029408021981","article-title":"On the berendsen thermostat","volume":"13","author":"Lemak","year":"1994","journal-title":"Mol. Simul."},{"issue":"12","key":"10.1016\/j.jmgm.2024.108927_b36","doi-asserted-by":"crossref","first-page":"7182","DOI":"10.1063\/1.328693","article-title":"Polymorphic transitions in single crystals: A new molecular dynamics method","volume":"52","author":"Parrinello","year":"1981","journal-title":"J. Appl. Phys."},{"issue":"4","key":"10.1016\/j.jmgm.2024.108927_b37","doi-asserted-by":"crossref","first-page":"566","DOI":"10.1002\/prot.340230412","article-title":"Knowledge-based protein secondary structure assignment","volume":"23","author":"Frishman","year":"1995","journal-title":"Proteins: Struct. Function Bioinformat."},{"issue":"1","key":"10.1016\/j.jmgm.2024.108927_b38","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1016\/0263-7855(96)00018-5","article-title":"VMD: visual molecular dynamics","volume":"14","author":"Humphrey","year":"1996","journal-title":"J. Molecular Graphics"},{"issue":"7","key":"10.1016\/j.jmgm.2024.108927_b39","doi-asserted-by":"crossref","first-page":"2386","DOI":"10.1021\/jacs.7b12191","article-title":"Markov state models: From an art to a science","volume":"140","author":"Husic","year":"2018","journal-title":"J. Am. Chem. Soc."},{"key":"10.1016\/j.jmgm.2024.108927_b40","doi-asserted-by":"crossref","first-page":"135","DOI":"10.1016\/j.sbi.2014.04.002","article-title":"Markov state models of biomolecular conformational dynamics","volume":"25","author":"Chodera","year":"2014","journal-title":"Curr. Opin. Struct. Biol."},{"issue":"17","key":"10.1016\/j.jmgm.2024.108927_b41","doi-asserted-by":"crossref","DOI":"10.1063\/1.3565032","article-title":"Markov models of molecular kinetics: Generation and validation","volume":"134","author":"Prinz","year":"2011","journal-title":"J. Chem. Phys."},{"issue":"23","key":"10.1016\/j.jmgm.2024.108927_b42","doi-asserted-by":"crossref","first-page":"3634","DOI":"10.1103\/PhysRevLett.72.3634","article-title":"Separation of a mixture of independent signals using time delayed correlations","volume":"72","author":"Molgedey","year":"1994","journal-title":"Phys. Rev. Lett."},{"issue":"4","key":"10.1016\/j.jmgm.2024.108927_b43","doi-asserted-by":"crossref","first-page":"1739","DOI":"10.1021\/ct4009156","article-title":"Variational approach to molecular kinetics","volume":"10","author":"Nuske","year":"2014","journal-title":"J. Chem. Theory Comput."},{"key":"10.1016\/j.jmgm.2024.108927_b44","doi-asserted-by":"crossref","unstructured":"G. P\u00e9rez-Hern\u00e1ndez, F. Paul, T. Giorgino, G. De Fabritiis, F. No\u00e9, Identification of slow molecular order parameters for Markov model construction, J. Chem. Phys. 139 (1).","DOI":"10.1063\/1.4811489"},{"issue":"2","key":"10.1016\/j.jmgm.2024.108927_b45","doi-asserted-by":"crossref","DOI":"10.1063\/1.2404953","article-title":"A coarse graining method for the identification of transition rates between molecular conformations","volume":"126","author":"Kube","year":"2007","journal-title":"J. Chem. Phys."},{"issue":"11","key":"10.1016\/j.jmgm.2024.108927_b46","doi-asserted-by":"crossref","first-page":"5525","DOI":"10.1021\/acs.jctc.5b00743","article-title":"PyEMMA 2: A software package for estimation, validation, and analysis of Markov models","volume":"11","author":"Scherer","year":"2015","journal-title":"J. Chem. Theory Comput."},{"issue":"6","key":"10.1016\/j.jmgm.2024.108927_b47","doi-asserted-by":"crossref","first-page":"1537","DOI":"10.1002\/anie.201710642","article-title":"Charge-induced secondary structure transformation of amyloid-derived dipeptide assemblies from \u03b2-sheet to \u03b1-helix","volume":"57","author":"Xing","year":"2018","journal-title":"Ang. Chem. Int. Ed."},{"key":"10.1016\/j.jmgm.2024.108927_b48","doi-asserted-by":"crossref","unstructured":"T. Pauly, N. Bolakhrif, J. Kaiser, L. Nagel-Steger, L. Gremer, H. Gohlke, D. Willbold, Met\/Val129 polymorphism of the full-length human prion protein dictates distinct pathways of amyloid formation, J. Biol. Chem. 298 (10).","DOI":"10.1016\/j.jbc.2022.102430"},{"key":"10.1016\/j.jmgm.2024.108927_b49","doi-asserted-by":"crossref","unstructured":"M.K. Scherer, B.E. Husic, M. Hoffmann, F. Paul, H. Wu, F. No\u00e9, Variational selection of features for molecular kinetics, J. Chem. Phys. 150 (19).","DOI":"10.1063\/1.5083040"},{"issue":"6","key":"10.1016\/j.jmgm.2024.108927_b50","doi-asserted-by":"crossref","first-page":"6719","DOI":"10.1021\/acs.chemrev.1c00774","article-title":"Conformational dynamics of intrinsically disordered proteins regulate biomolecular condensate chemistry","volume":"122","author":"Abyzov","year":"2022","journal-title":"Chem. Rev."},{"issue":"10\u201311","key":"10.1016\/j.jmgm.2024.108927_b51","doi-asserted-by":"crossref","first-page":"786","DOI":"10.1080\/08927022.2020.1828583","article-title":"A review of advancements in coarse-grained molecular dynamics simulations","volume":"47","author":"Joshi","year":"2021","journal-title":"Mol. Simul."},{"issue":"6","key":"10.1016\/j.jmgm.2024.108927_b52","doi-asserted-by":"crossref","first-page":"2536","DOI":"10.1046\/j.1471-4159.2000.0752536.x","article-title":"The role of prion peptide structure and aggregation in toxicity and membrane binding","volume":"75","author":"Rymer","year":"2000","journal-title":"J. Neurochem."},{"issue":"18","key":"10.1016\/j.jmgm.2024.108927_b53","doi-asserted-by":"crossref","first-page":"5492","DOI":"10.1002\/chem.200903290","article-title":"Molecular structure of amyloid fibrils formed by residues 127 to 147 of the human prion protein","volume":"16","author":"Lin","year":"2010","journal-title":"Chem. Eur. J."},{"issue":"2","key":"10.1016\/j.jmgm.2024.108927_b54","doi-asserted-by":"crossref","first-page":"532","DOI":"10.1021\/ja905595k","article-title":"Oligomers of the prion protein fragment 106-126 are likely assembled from \u03b2-hairpins in solution, and methionine oxidation inhibits assembly without altering the peptide\u2019s monomeric conformation","volume":"132","author":"Grabenauer","year":"2010","journal-title":"J. Am. Chem. Soc."},{"issue":"42","key":"10.1016\/j.jmgm.2024.108927_b55","doi-asserted-by":"crossref","first-page":"11835","DOI":"10.1073\/pnas.1612362113","article-title":"Exploring the aggregation free energy landscape of the amyloid-\u03b2 protein (1\u201340)","volume":"113","author":"Zheng","year":"2016","journal-title":"Proc. Natl. Acad. Sci."},{"issue":"14","key":"10.1016\/j.jmgm.2024.108927_b56","doi-asserted-by":"crossref","first-page":"6422","DOI":"10.1039\/c3cp54336f","article-title":"Equilibrium thermodynamics and folding kinetics of a short, fast-folding, beta-hairpin","volume":"16","author":"Jimenez-Cruz","year":"2014","journal-title":"Phys. Chem. Chem. Phys."},{"issue":"8","key":"10.1016\/j.jmgm.2024.108927_b57","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pcbi.1000452","article-title":"A kinetic model of trp-cage folding from multiple biased molecular dynamics simulations","volume":"5","author":"Marinelli","year":"2009","journal-title":"PLoS Comput. Biol."},{"issue":"43","key":"10.1016\/j.jmgm.2024.108927_b58","doi-asserted-by":"crossref","first-page":"16092","DOI":"10.1021\/ja403147m","article-title":"Dynamics of an intrinsically disordered protein reveal metastable conformations that potentially seed aggregation","volume":"135","author":"Qiao","year":"2013","journal-title":"J. Am. Chem. Soc."},{"issue":"27","key":"10.1016\/j.jmgm.2024.108927_b59","doi-asserted-by":"crossref","first-page":"28515","DOI":"10.1074\/jbc.M313762200","article-title":"The residue 129 polymorphism in human prion protein does not confer susceptibility to creutzfeldt-jakob disease by altering the structure or global stability of PrPC","volume":"279","author":"Hosszu","year":"2004","journal-title":"J. Biol. Chem."}],"container-title":["Journal of Molecular Graphics and Modelling"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1093326324002274?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1093326324002274?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,2,12]],"date-time":"2025-02-12T08:57:46Z","timestamp":1739350666000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1093326324002274"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,3]]},"references-count":59,"alternative-id":["S1093326324002274"],"URL":"https:\/\/doi.org\/10.1016\/j.jmgm.2024.108927","relation":{},"ISSN":["1093-3263"],"issn-type":[{"value":"1093-3263","type":"print"}],"subject":[],"published":{"date-parts":[[2025,3]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Structural characterization of codon 129 polymorphism in prion peptide segments (PrP127-132) using the Markov State Models","name":"articletitle","label":"Article Title"},{"value":"Journal of Molecular Graphics and Modelling","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.jmgm.2024.108927","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2024 Elsevier Inc. All rights are reserved, including those for text and data mining, AI training, and similar technologies.","name":"copyright","label":"Copyright"}],"article-number":"108927"}}