{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,31]],"date-time":"2026-10-31T05:37:25Z","timestamp":1793425045656,"version":"4.5.0"},"reference-count":28,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T00:00:00Z","timestamp":1761955200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T00:00:00Z","timestamp":1761955200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,12,20]],"date-time":"2025-12-20T00:00:00Z","timestamp":1766188800000},"content-version":"vor","delay-in-days":49,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Journal of Plant Physiology"],"published-print":{"date-parts":[[2025,11]]},"DOI":"10.1016\/j.jplph.2025.154599","type":"journal-article","created":{"date-parts":[[2025,8,27]],"date-time":"2025-08-27T15:11:29Z","timestamp":1756307489000},"page":"154599","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":3,"special_numbering":"C","title":["Molecular cloning and characterization of caffeic acid O-methyltransferase from Acorus calamus"],"prefix":"10.1016","volume":"314","author":[{"given":"Takao","family":"Koeduka","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Koki","family":"Aono","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kanon","family":"Goto","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Seichi","family":"Suzuki","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shiro","family":"Suzuki","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bolortuya","family":"Ulziibat","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Atsushi","family":"Okazawa","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.jplph.2025.154599_bib1","doi-asserted-by":"crossref","first-page":"2259","DOI":"10.1021\/acs.jafc.6b04696","article-title":"Phenylpropenes: occurrence, distribution, and biosynthesis in fruit","volume":"66","author":"Atkinson","year":"2016","journal-title":"J. Agric. Food Chem."},{"key":"10.1016\/j.jplph.2025.154599_bib2","doi-asserted-by":"crossref","first-page":"577","DOI":"10.3390\/plants9050577","article-title":"Cloning and expression of a Perilla frutescens cytochrome P450 enzyme catalyzing the hydroxylation of phenylpropenes","volume":"9","author":"Baba","year":"2020","journal-title":"Plants"},{"key":"10.1016\/j.jplph.2025.154599_bib3","doi-asserted-by":"crossref","DOI":"10.3389\/fphar.2022.1004529","article-title":"Advances in extraction methods, chemical constituents, pharmacological activities, molecular targets and toxicology of volatile oil from Acorus calamus var. angustatus besser","volume":"13","author":"Bai","year":"2022","journal-title":"Front. Pharmacol."},{"key":"10.1016\/j.jplph.2025.154599_bib4","doi-asserted-by":"crossref","first-page":"887","DOI":"10.1002\/cbdv.200890102","article-title":"Volatiles from leaves and rhizomes of fragrant acorus spp. (acoraceae)","volume":"5","author":"Du","year":"2008","journal-title":"Chem. Biodivers."},{"key":"10.1016\/j.jplph.2025.154599_bib5","doi-asserted-by":"crossref","first-page":"3891","DOI":"10.1021\/acs.jcim.1c00203","article-title":"AutoDock vina 1.2.0: new docking methods, expanded force field, and python bindings","volume":"61","author":"Eberhardt","year":"2021","journal-title":"J. Chem. Inf. Model."},{"key":"10.1016\/j.jplph.2025.154599_bib6","doi-asserted-by":"crossref","first-page":"1536","DOI":"10.1104\/pp.007146","article-title":"Differential production of meta hydroxylated phenylpropanoids in sweet basil peltate glandular trichomes and leaves is controlled by the activities of specific acyltransferases and hydroxylases","volume":"130","author":"Gang","year":"2002","journal-title":"Plant Physiol."},{"key":"10.1016\/j.jplph.2025.154599_bib7","doi-asserted-by":"crossref","first-page":"1888","DOI":"10.1002\/ajb2.1178","article-title":"Monocot plastid phylogenomics, timelin, net rates of species diversification, the power of multi-gene analyses, and a functional model for the origin of monocots","volume":"105","author":"Givnish","year":"2018","journal-title":"Am. J. Bot."},{"key":"10.1016\/j.jplph.2025.154599_bib8","doi-asserted-by":"crossref","first-page":"14","DOI":"10.1002\/pro.3235","article-title":"UCSF ChimeraX: meeting modern challenges in visualization and analysis","volume":"27","author":"Goddard","year":"2018","journal-title":"Protein Sci."},{"key":"10.1016\/j.jplph.2025.154599_bib9","doi-asserted-by":"crossref","first-page":"14229","DOI":"10.1039\/D1RA00350J","article-title":"Sesquiterpenoids of diverse types from the rhizomes of Acorus calamus","volume":"11","author":"Hao","year":"2021","journal-title":"RSC Adv."},{"key":"10.1016\/j.jplph.2025.154599_bib10","doi-asserted-by":"crossref","DOI":"10.1016\/j.phytochem.2023.113626","article-title":"Acorus calamus var. angustatus Besser: insight into current research on ethnopharmacological use, phytochemistry, pharmacology, toxicology, and pharmacokinetics","volume":"210","author":"He","year":"2023","journal-title":"Phytochemistry"},{"key":"10.1016\/j.jplph.2025.154599_bib11","doi-asserted-by":"crossref","DOI":"10.1016\/j.phytochem.2022.113318","article-title":"Identification and characterization of three nearly identical linalool\/nerolidol synthase from Acorus calamus","volume":"202","author":"Ibdah","year":"2022","journal-title":"Phytochemistry"},{"key":"10.1016\/j.jplph.2025.154599_bib12","doi-asserted-by":"crossref","first-page":"772","DOI":"10.1093\/molbev\/mst010","article-title":"MAFFT multiple sequence alignment software version 7: improvements in performance and usability","volume":"30","author":"Katoh","year":"2013","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.jplph.2025.154599_bib13","doi-asserted-by":"crossref","first-page":"125","DOI":"10.1248\/bpb.b20-00759","article-title":"Expression, purification and characterization of CAR\/NCOA-1 tethered protein in E. coli using maltose-binding protein fusion tag and gelatinized corn starch","volume":"44","author":"Kobashigawa","year":"2021","journal-title":"Biol. Pharm. Bull."},{"key":"10.1016\/j.jplph.2025.154599_bib14","doi-asserted-by":"crossref","first-page":"401","DOI":"10.5511\/plantbiotechnology.14.0801a","article-title":"The phenylpropene synthase pathway and its applications in the engineering of volatile phenylpropanoids in plants","volume":"31","author":"Koeduka","year":"2014","journal-title":"Plant Biotechnol."},{"key":"10.1016\/j.jplph.2025.154599_bib15","doi-asserted-by":"crossref","first-page":"725","DOI":"10.1007\/s00425-016-2542-2","article-title":"Benzenoid biosynthesis in the flowers of eriobotrya japonica: molecular cloning and functional characterization of p-methoxybenzoic acid carboxyl methyltransferase","volume":"244","author":"Koeduka","year":"2016","journal-title":"Planta"},{"key":"10.1016\/j.jplph.2025.154599_bib16","doi-asserted-by":"crossref","first-page":"539","DOI":"10.1016\/j.jbiosc.2018.10.011","article-title":"Molecular cloning and functional characterization of an O-methyltransferase catalyzing 4'-O-methylation of resveratrol in Acorus calamus","volume":"127","author":"Koeduka","year":"2019","journal-title":"J. Biosci. Bioeng."},{"key":"10.1016\/j.jplph.2025.154599_bib17","doi-asserted-by":"crossref","first-page":"157","DOI":"10.5511\/plantbiotechnology.13.0219a","article-title":"Characterization of 5-hydroxyconiferaldehyde O-methyltransferase in Oryza sativa","volume":"30","author":"Koshiba","year":"2013","journal-title":"Plant Biotechnol."},{"key":"10.1016\/j.jplph.2025.154599_bib18","doi-asserted-by":"crossref","first-page":"43","DOI":"10.3390\/molecules28010043","article-title":"Functional diversification and structural origins of plant natural product methyltransferases","volume":"28","author":"Lashley","year":"2022","journal-title":"Molecules"},{"key":"10.1016\/j.jplph.2025.154599_bib19","doi-asserted-by":"crossref","first-page":"2778","DOI":"10.1021\/ci200227u","article-title":"LigPlot+: multiple ligand\u2013protein interaction diagrams for drug discovery","volume":"51","author":"Laskowski","year":"2011","journal-title":"J. Chem. Inf. Model."},{"key":"10.1016\/j.jplph.2025.154599_bib20","doi-asserted-by":"crossref","first-page":"3661","DOI":"10.1038\/s41467-023-38829-3","article-title":"Diploid and tetraploid genomes of acorus and the evolution of monocots","volume":"14","author":"Ma","year":"2023","journal-title":"Nat. Commun."},{"key":"10.1016\/j.jplph.2025.154599_bib21","doi-asserted-by":"crossref","first-page":"679","DOI":"10.1038\/s41592-022-01488-1","article-title":"ColabFold: making protein folding accessible to all","volume":"19","author":"Mirdita","year":"2022","journal-title":"Nat. Methods"},{"key":"10.1016\/j.jplph.2025.154599_bib22","doi-asserted-by":"crossref","first-page":"37","DOI":"10.1016\/S0079-9920(03)80017-5","article-title":"Structural, functional and evolutionary basis for methylation of plant small molecules","volume":"37","author":"Noel","year":"2003","journal-title":"Recent Adv. Phytochem."},{"key":"10.1016\/j.jplph.2025.154599_bib23","doi-asserted-by":"crossref","first-page":"8955","DOI":"10.1073\/pnas.96.16.8955","article-title":"Coniferyl aldehyde 5-hydroxylation and methylation direct syringyl lignin biosynthesis in angiosperms","volume":"96","author":"Osakabe","year":"1999","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.jplph.2025.154599_bib24","doi-asserted-by":"crossref","first-page":"808","DOI":"10.1126\/science.1118510","article-title":"Biosynthesis of plant volatiles: nature's diversity and ingenuity","volume":"311","author":"Pichersky","year":"2006","journal-title":"Science"},{"key":"10.1016\/j.jplph.2025.154599_bib25","doi-asserted-by":"crossref","first-page":"317","DOI":"10.1016\/j.ijbiomac.2021.11.135","article-title":"Structure basis of the caffeic acid O-methyltransferase from ligusiticum chuanxiong to understand its selective mechanism","volume":"194","author":"Song","year":"2022","journal-title":"Int. J. Biol. Macromol."},{"key":"10.1016\/j.jplph.2025.154599_bib26","doi-asserted-by":"crossref","first-page":"3022","DOI":"10.1093\/molbev\/msab120","article-title":"MEGA11: molecular evolutionary genetics analysis version 11","volume":"38","author":"Tamura","year":"2021","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.jplph.2025.154599_bib27","doi-asserted-by":"crossref","first-page":"755","DOI":"10.1046\/j.1365-313X.2002.01396.x","article-title":"Isolation, cloning and expression of a multifunctional O-methyltransferase capable of forming 2,5-dimethyl-4-methoxy-3(2H)-furanone, one of the key aroma compounds in strawberry fruits","volume":"31","author":"Wein","year":"2002","journal-title":"Plant J."},{"key":"10.1016\/j.jplph.2025.154599_bib28","doi-asserted-by":"crossref","DOI":"10.1042\/BSR20210006","article-title":"Exploring the biosynthetic pathway of lignin in Acorus tatarinowii Schott using de novo leaf and rhizome transcriptome analysis","volume":"41","author":"Zhang","year":"2021","journal-title":"Biosci. Rep."}],"container-title":["Journal of Plant Physiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0176161725001816?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0176161725001816?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,12,20]],"date-time":"2025-12-20T05:20:13Z","timestamp":1766208013000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0176161725001816"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,11]]},"references-count":28,"alternative-id":["S0176161725001816"],"URL":"https:\/\/doi.org\/10.1016\/j.jplph.2025.154599","relation":{},"ISSN":["0176-1617"],"issn-type":[{"value":"0176-1617","type":"print"}],"subject":[],"published":{"date-parts":[[2025,11]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Molecular cloning and characterization of caffeic acid O-methyltransferase from Acorus calamus","name":"articletitle","label":"Article Title"},{"value":"Journal of Plant Physiology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.jplph.2025.154599","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 The Authors. Published by Elsevier GmbH.","name":"copyright","label":"Copyright"}],"article-number":"154599"}}