{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,5,25]],"date-time":"2024-05-25T18:31:16Z","timestamp":1716661876112},"reference-count":16,"publisher":"Elsevier BV","issue":"1","license":[{"start":{"date-parts":[[2013,4,1]],"date-time":"2013-04-01T00:00:00Z","timestamp":1364774400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Journal of Virological Methods"],"published-print":{"date-parts":[[2013,4]]},"DOI":"10.1016\/j.jviromet.2013.01.001","type":"journal-article","created":{"date-parts":[[2013,1,23]],"date-time":"2013-01-23T21:02:38Z","timestamp":1358974958000},"page":"87-92","source":"Crossref","is-referenced-by-count":5,"title":["Evaluations of an in-house drug resistance method for HIV-1 drug resistance using ViroSeq\u2122 2.0 genotyping system as a gold standard"],"prefix":"10.1016","volume":"189","author":[{"given":"Devidas N.","family":"Chaturbhuj","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Pravin S.","family":"Deshmukh","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nitin K.","family":"Hingankar","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"K.","family":"Siddhaarth","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sohan N.","family":"Deshpande","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sourav","family":"Sen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sandhya","family":"Kabra","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ramesh S.","family":"Paranjape","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Srikanth P.","family":"Tripathy","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"issue":"Suppl. 2","key":"10.1016\/j.jviromet.2013.01.001_bib0005","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1177\/135965350801302S03","article-title":"The World Health Organization's global strategy for prevention and assessment of HIV drug resistance","volume":"13","author":"Bennett","year":"2008","journal-title":"Antivir. Ther."},{"key":"10.1016\/j.jviromet.2013.01.001_bib0010","doi-asserted-by":"crossref","first-page":"125","DOI":"10.1016\/j.jcv.2007.03.008","article-title":"Evaluation of an in-house genotyping resistance test for HIV-1 drug resistance interpretation and genotyping","volume":"39","author":"Chen","year":"2007","journal-title":"J. Clin. Virol."},{"key":"10.1016\/j.jviromet.2013.01.001_bib0015","series-title":"Guidelines for the Use of Antiretroviral Agents in HIV-1-infected Adults and Adolescents","article-title":"Panel on antiretroviral guidelines for adults and adolescents","author":"DHHS","year":"2011"},{"key":"10.1016\/j.jviromet.2013.01.001_bib0020","doi-asserted-by":"crossref","first-page":"2711","DOI":"10.1128\/JCM.42.6.2711-2717.2004","article-title":"Performance of the Celera Diagnostics ViroSeq HIV-1 Genotyping System for sequence-based analysis of diverse human immunodeficiency virus type 1 strains","volume":"42","author":"Eshleman","year":"2004","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.jviromet.2013.01.001_bib0025","doi-asserted-by":"crossref","first-page":"696","DOI":"10.1080\/10635150390235520","article-title":"A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood","volume":"52","author":"Guindon","year":"2003","journal-title":"Syst. Biol."},{"key":"10.1016\/j.jviromet.2013.01.001_bib0030","first-page":"95","article-title":"BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95\/98\/NT","volume":"41","author":"Hall","year":"1999","journal-title":"Nucleic Acids Symp. Ser."},{"key":"10.1016\/j.jviromet.2013.01.001_bib0035","series-title":"Computational Analysis of HIV Molecular Sequences","first-page":"55","article-title":"HIV signature and sequence variation analysis","author":"Korber","year":"2000"},{"key":"10.1016\/j.jviromet.2013.01.001_bib0040","unstructured":"National AIDS Control Organization, 2009. Department of AIDS Control Ministry of Health and Family Welfare Government of India. Available at: http:\/\/www.nacoonline.org (accessed 14.07.11)."},{"key":"10.1016\/j.jviromet.2013.01.001_bib0045","unstructured":"National AIDS Control Organization, 2011. National Guidelines on Second-line ART for adults and adolescents. Available at: http:\/\/www.nacoonline.org (accessed 14.07.11)."},{"key":"10.1016\/j.jviromet.2013.01.001_bib0050","doi-asserted-by":"crossref","first-page":"57","DOI":"10.1016\/S1386-6532(01)00252-9","article-title":"Performance of an in-house genotypic antiretroviral resistance assay in patients pretreated with multiple human immunodeficiency virus type 1 protease and reverse transcriptase inhibitors","volume":"25","author":"Peduzzi","year":"2002","journal-title":"J. Clin. Virol."},{"key":"10.1016\/j.jviromet.2013.01.001_bib0055","doi-asserted-by":"crossref","first-page":"298","DOI":"10.1093\/nar\/gkg100","article-title":"Human immunodeficiency virus reverse transcriptase and protease sequence database","volume":"31","author":"Rhee","year":"2003","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.jviromet.2013.01.001_bib0060","doi-asserted-by":"crossref","first-page":"211","DOI":"10.1016\/j.jviromet.2009.03.021","article-title":"Evaluation of two human immunodeficiency virus-1 genotyping systems: ViroSeq 2.0 and an in-house method","volume":"159","author":"Saravanan","year":"2009","journal-title":"J. Virol. Methods"},{"key":"10.1016\/j.jviromet.2013.01.001_bib0065","doi-asserted-by":"crossref","first-page":"1303","DOI":"10.1089\/aid.2007.0090","article-title":"High prevalence of human immunodeficiency virus type 1 drug resistance mutations in antiretroviral treatment-experienced patients from Pune, India","volume":"23","author":"Sen","year":"2007","journal-title":"AIDS Res. Hum. Retroviruses"},{"key":"10.1016\/j.jviromet.2013.01.001_bib0070","doi-asserted-by":"crossref","first-page":"137","DOI":"10.1016\/j.jviromet.2005.11.004","article-title":"A sensitive in-house RT-PCR genotyping system for combined detection of plasma HIV-1 and assessment of drug resistance","volume":"133","author":"Steegen","year":"2006","journal-title":"J. Virol. Methods"},{"key":"10.1016\/j.jviromet.2013.01.001_bib0075","doi-asserted-by":"crossref","first-page":"321","DOI":"10.1001\/jama.2010.1004","article-title":"Antiretroviral treatment of adult HIV infection: 2010 recommendations of the International AIDS Society-USA panel","volume":"21","author":"Thompson","year":"2010","journal-title":"JAMA"},{"key":"10.1016\/j.jviromet.2013.01.001_bib0080","doi-asserted-by":"crossref","first-page":"505","DOI":"10.1016\/j.jviromet.2009.11.011","article-title":"Affordable in-house antiretroviral drug resistance assay with good performance in non-subtype B HIV-1","volume":"163","author":"Wallis","year":"2010","journal-title":"J. Virol. Methods"}],"container-title":["Journal of Virological Methods"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0166093413000062?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0166093413000062?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2023,6,28]],"date-time":"2023-06-28T22:40:38Z","timestamp":1687992038000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0166093413000062"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013,4]]},"references-count":16,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2013,4]]}},"alternative-id":["S0166093413000062"],"URL":"https:\/\/doi.org\/10.1016\/j.jviromet.2013.01.001","relation":{},"ISSN":["0166-0934"],"issn-type":[{"value":"0166-0934","type":"print"}],"subject":[],"published":{"date-parts":[[2013,4]]}}}