{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,7]],"date-time":"2025-11-07T23:53:51Z","timestamp":1762559631666,"version":"build-2065373602"},"reference-count":25,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2025,8,1]],"date-time":"2025-08-01T00:00:00Z","timestamp":1754006400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,8,1]],"date-time":"2025-08-01T00:00:00Z","timestamp":1754006400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,8,1]],"date-time":"2025-08-01T00:00:00Z","timestamp":1754006400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2025,8,1]],"date-time":"2025-08-01T00:00:00Z","timestamp":1754006400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2025,8,1]],"date-time":"2025-08-01T00:00:00Z","timestamp":1754006400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2025,8,1]],"date-time":"2025-08-01T00:00:00Z","timestamp":1754006400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,8,1]],"date-time":"2025-08-01T00:00:00Z","timestamp":1754006400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"funder":[{"DOI":"10.13039\/100008137","name":"Ministry of Natural Resources","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100008137","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Marine Genomics"],"published-print":{"date-parts":[[2025,8]]},"DOI":"10.1016\/j.margen.2025.101201","type":"journal-article","created":{"date-parts":[[2025,7,15]],"date-time":"2025-07-15T20:01:11Z","timestamp":1752609671000},"page":"101201","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"special_numbering":"C","title":["Complete genome sequence of Vibrio sinus, a potential contributor to collagen degradation"],"prefix":"10.1016","volume":"82","author":[{"given":"Dingyong","family":"Huang","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wanjia","family":"Tong","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jinfeng","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jianjia","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yan","family":"Zhuang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Peng","family":"Tian","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiaolei","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/j.margen.2025.101201_bb0005","article-title":"Cloning, purification and characterization of the collagenase ColA expressed by Bacillus cereus ATCC 14579","volume":"119","author":"Abfalter","year":"2016","journal-title":"PLoS One"},{"key":"10.1016\/j.margen.2025.101201_bb0010","doi-asserted-by":"crossref","first-page":"975","DOI":"10.1016\/j.apjtb.2016.07.017","article-title":"Therapeutic applications of collagenase (metalloproteases): a review","volume":"611","author":"Alipour","year":"2016","journal-title":"Asian Pac. J. Trop. Biomed."},{"issue":"2","key":"10.1016\/j.margen.2025.101201_bib116","doi-asserted-by":"crossref","first-page":"237","DOI":"10.1016\/j.ijcard.2011.06.048","article-title":"Matrix metalloproteinases, tissue inhibitors of metalloproteinases, and heart failure outcomes","volume":"151","author":"Bhalla","year":"2011","journal-title":"Int. J. Cardiol."},{"key":"10.1016\/j.margen.2025.101201_bb0015","doi-asserted-by":"crossref","first-page":"106","DOI":"10.3109\/1040841X.2014.904270","article-title":"Bacterial collagenases - a review","volume":"421","author":"Duarte","year":"2016","journal-title":"Crit. Rev. Microbiol."},{"key":"10.1016\/j.margen.2025.101201_bb0020","article-title":"Crystal structure of Grimontia hollisae collagenase provides insights into its novel substrate specificity toward collagen","volume":"2988","author":"Ikeuchi","year":"2022","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.margen.2025.101201_bb0025","doi-asserted-by":"crossref","first-page":"223","DOI":"10.1016\/B978-0-12-416003-3.00014-7","article-title":"Biological importance and applications of squalene and squalane","volume":"65","author":"Kim","year":"2012","journal-title":"Adv. Food Nutr. Res."},{"key":"10.1016\/j.margen.2025.101201_bb0030","doi-asserted-by":"crossref","first-page":"722","DOI":"10.1101\/gr.215087.116","article-title":"Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation","volume":"275","author":"Koren","year":"2017","journal-title":"Genome Res."},{"key":"10.1016\/j.margen.2025.101201_bb0035","first-page":"2499","article-title":"Mechanisms and applications of enzyme-catalyzed protein cross-linking. Sheng wu gong cheng xue bao =","volume":"387","author":"Long","year":"2022","journal-title":"Chin. J. Biotechnol."},{"issue":"4","key":"10.1016\/j.margen.2025.101201_bib117","article-title":"Closed genome sequence of Fretibacterium fastidiosu, a potential contributor to periodontal disease","volume":"14","author":"Mori","year":"2025","journal-title":"Microbiol. Resour. Ann."},{"issue":"7","key":"10.1016\/j.margen.2025.101201_bb0040","doi-asserted-by":"crossref","first-page":"1043","DOI":"10.1101\/gr.186072.114","article-title":"CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes","volume":"25","author":"Parks","year":"2015","journal-title":"Genome Res."},{"key":"10.1016\/j.margen.2025.101201_bb0045","doi-asserted-by":"crossref","first-page":"915","DOI":"10.1038\/176915a0","article-title":"The structure of collagen","volume":"1764489","author":"Rich","year":"1955","journal-title":"Nature"},{"key":"10.1016\/j.margen.2025.101201_bb0050","doi-asserted-by":"crossref","DOI":"10.1016\/j.enzmictec.2021.109779","article-title":"Studies on Vibrio mimicus derived collagenase variants providing insights into critical role(s) played by the FAXWXXT motifs in its collagen-binding domain","volume":"147","author":"Santra","year":"2021","journal-title":"Enzym. Microb. Technol."},{"key":"10.1016\/j.margen.2025.101201_bb0055","article-title":"A conserved strategy to attack collagen: the activator domain in bacterial collagenases unwinds triple- helical collagen","volume":"12116","author":"Serwanja","year":"2024","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.margen.2025.101201_bb0060","doi-asserted-by":"crossref","first-page":"929","DOI":"10.1146\/annurev.biochem.77.032207.120833","article-title":"Collagen structure and stability","volume":"78","author":"Shoulders","year":"2009","journal-title":"Annu. Rev. Biochem."},{"key":"10.1016\/j.margen.2025.101201_bb0065","doi-asserted-by":"crossref","first-page":"50","DOI":"10.1016\/j.actbio.2023.01.025","article-title":"Mechanochemistry of collagen","volume":"163","author":"Siadat","year":"2023","journal-title":"Acta Biomater."},{"key":"10.1016\/j.margen.2025.101201_bb0070","doi-asserted-by":"crossref","DOI":"10.1016\/j.mbplus.2021.100067","article-title":"In-depth correlation analysis demonstrates that 4-hydroxyproline at the Yaa position of Gly-Xaa-Yaa repeats dominantly stabilizes collagen triple helix","volume":"10","author":"Taga","year":"2021","journal-title":"Matrix Biology Plus"},{"key":"10.1016\/j.margen.2025.101201_bb0075","first-page":"20","article-title":"Matrix metalloproteinases: fold and function of their catalytic domains","volume":"18031","author":"Tallant","year":"2010","journal-title":"BBA-Mol. Cell. Res."},{"key":"10.1016\/j.margen.2025.101201_bb0080","doi-asserted-by":"crossref","first-page":"917","DOI":"10.1016\/j.jmb.2009.03.062","article-title":"Crystal structures of MMP-9 complexes with five inhibitors: contribution of the flexible Arg424 side chain to selectivity (vol 371, pg 989, 2007)","volume":"3884","author":"Tochowicz","year":"2009","journal-title":"J. Mol. Biol."},{"key":"10.1016\/j.margen.2025.101201_bb0085","article-title":"Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement","volume":"911","author":"Walker","year":"2014","journal-title":"PLoS One"},{"key":"10.1016\/j.margen.2025.101201_bb0090","article-title":"Structure of Vibrio collagenase VhaC provides insight into the mechanism of bacterial collagenolysis","volume":"131","author":"Wang","year":"2022","journal-title":"Nat. Commun."},{"key":"10.1016\/j.margen.2025.101201_bb0095","article-title":"Vibrio sinus sp. nov., a marine bacterium isolated from coastal seawater","volume":"731","author":"Wang","year":"2023","journal-title":"Int. J. Syst. Evol. Microbiol."},{"key":"10.1016\/j.margen.2025.101201_bb0100","doi-asserted-by":"crossref","first-page":"292","DOI":"10.1016\/j.ijbiomac.2017.01.127","article-title":"Improved thermal-stability and mechanical properties of type I collagen by crosslinking with casein, keratin and soy protein isolate using transglutaminase","volume":"98","author":"Wu","year":"2017","journal-title":"Int. J. Biol. Macromol."},{"key":"10.1016\/j.margen.2025.101201_bb0105","article-title":"Collagenases and their inhibitors: a review","volume":"51","author":"Wu","year":"2023","journal-title":"Collag. Leather"},{"key":"10.1016\/j.margen.2025.101201_bb0110","doi-asserted-by":"crossref","first-page":"1385","DOI":"10.4014\/jmb.2404.04051","article-title":"Thermostable bacterial Collagenolytic proteases: a review","volume":"347","author":"Zhang","year":"2024","journal-title":"J. Microbiol. Biotechnol."},{"key":"10.1016\/j.margen.2025.101201_bb0115","doi-asserted-by":"crossref","first-page":"6098","DOI":"10.1128\/AEM.00883-15","article-title":"Diversity, structures, and collagen-degrading mechanisms of bacterial Collagenolytic proteases","volume":"8118","author":"Zhang","year":"2015","journal-title":"Appl. Environ. Microbiol."}],"container-title":["Marine Genomics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1874778725000376?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1874778725000376?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,11,7]],"date-time":"2025-11-07T23:50:18Z","timestamp":1762559418000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1874778725000376"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,8]]},"references-count":25,"alternative-id":["S1874778725000376"],"URL":"https:\/\/doi.org\/10.1016\/j.margen.2025.101201","relation":{},"ISSN":["1874-7787"],"issn-type":[{"type":"print","value":"1874-7787"}],"subject":[],"published":{"date-parts":[[2025,8]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Complete genome sequence of Vibrio sinus, a potential contributor to collagen degradation","name":"articletitle","label":"Article Title"},{"value":"Marine Genomics","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.margen.2025.101201","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 Published by Elsevier B.V.","name":"copyright","label":"Copyright"}],"article-number":"101201"}}