{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,6]],"date-time":"2026-10-06T09:27:18Z","timestamp":1791278838753,"version":"4.1.0"},"reference-count":84,"publisher":"Elsevier BV","issue":"2","license":[{"start":{"date-parts":[[2011,3,1]],"date-time":"2011-03-01T00:00:00Z","timestamp":1298937600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Infection, Genetics and Evolution"],"published-print":{"date-parts":[[2011,3]]},"DOI":"10.1016\/j.meegid.2010.06.019","type":"journal-article","created":{"date-parts":[[2010,7,7]],"date-time":"2010-07-07T08:52:15Z","timestamp":1278492735000},"page":"276-289","source":"Crossref","is-referenced-by-count":44,"title":["Repeated genomic transfers from echovirus 30 to echovirus 6 lineages indicate co-divergence between co-circulating populations of the two human enterovirus serotypes"],"prefix":"10.1016","volume":"11","author":[{"given":"J.-L.","family":"Bailly","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"A.","family":"Mirand","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"C.","family":"Henquell","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"C.","family":"Archimbaud","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"M.","family":"Chambon","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"C.","family":"Regagnon","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"F.","family":"Charbonn\u00e9","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"H.","family":"Peigue-Lafeuille","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.meegid.2010.06.019_bib0005","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1016\/j.virusres.2007.03.009","article-title":"Isolation of recombinant type 2 vaccine-derived poliovirus (VDPV) from a Nigerian child","volume":"127","author":"Adu","year":"2007","journal-title":"Virus Res."},{"key":"10.1016\/j.meegid.2010.06.019_bib0010","doi-asserted-by":"crossref","first-page":"77","DOI":"10.1006\/smvy.1997.0112","article-title":"Recombination and other rearrangements in picornaviruses","volume":"8","author":"Agol","year":"1997","journal-title":"Semin. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0015","doi-asserted-by":"crossref","first-page":"716","DOI":"10.1109\/TAC.1974.1100705","article-title":"A new look at the statistical model identification","volume":"19","author":"Akaike","year":"1974","journal-title":"IEEE Transact. Automat. Control"},{"key":"10.1016\/j.meegid.2010.06.019_bib0020","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1007\/s10096-007-0306-4","article-title":"Surveillance of enteroviruses in France, 2000\u20132004","volume":"26","author":"Antona","year":"2007","journal-title":"Eur. J. Clin. Microbiol. Infect. Dis."},{"key":"10.1016\/j.meegid.2010.06.019_bib0025","doi-asserted-by":"crossref","first-page":"50","DOI":"10.1038\/nrg964","article-title":"The evolutionary genomics of pathogen recombination","volume":"4","author":"Awadala","year":"2003","journal-title":"Nature Rev. Genet."},{"key":"10.1016\/j.meegid.2010.06.019_bib0030","doi-asserted-by":"crossref","first-page":"699","DOI":"10.1016\/j.meegid.2008.04.009","article-title":"Phylogeography of circulating populations of human echovirus 30 over 50 years: nucleotide polymorphism and signature of purifying selection in the VP1 capsid protein gene","volume":"9","author":"Bailly","year":"2009","journal-title":"Infect. Genet. Evol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0035","doi-asserted-by":"crossref","first-page":"670","DOI":"10.1002\/jmv.21122","article-title":"Molecular typing and epidemiology of non-polio enteroviruses isolated from Yunnan Province, the People's Republic of China","volume":"80","author":"Bingjun","year":"2008","journal-title":"J. Med. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0040","doi-asserted-by":"crossref","first-page":"8944","DOI":"10.1128\/JVI.00180-07","article-title":"Natural recombination event within the capsid genomic region leading to a chimeric strain of human enterovirus B","volume":"81","author":"Bouslama","year":"2007","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0045","doi-asserted-by":"crossref","first-page":"8973","DOI":"10.1128\/JVI.77.16.8973-8984.2003","article-title":"Complete genomic sequencing shows that poliovirus and members of human enteroviruses species C are closely related in the noncapsid region","volume":"77","author":"Brown","year":"2003","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0050","doi-asserted-by":"crossref","first-page":"1018","DOI":"10.1002\/jmv.21197","article-title":"Molecular epidemiological study of HEV-B enteroviruses involved in the increase in meningitis cases occurred in Spain during 2006","volume":"80","author":"Cabrerizo","year":"2008","journal-title":"J. Med. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0055","doi-asserted-by":"crossref","first-page":"340","DOI":"10.1002\/jmv.2039","article-title":"Circulation of enteroviruses and persistence of meningitis cases in the winter of 1999\u20132000","volume":"65","author":"Chambon","year":"2001","journal-title":"J. Med. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0060","doi-asserted-by":"crossref","first-page":"191","DOI":"10.1007\/s10096-003-0896-4","article-title":"Three echovirus serotypes responsible for outbreak of aseptic meningitis in Rhone-Alpes region France","volume":"22","author":"Chomel","year":"2003","journal-title":"Eur. J. Clin. Microbiol. Infect. Dis."},{"key":"10.1016\/j.meegid.2010.06.019_bib0065","doi-asserted-by":"crossref","first-page":"1468","DOI":"10.3201\/eid1008.040059","article-title":"Recombinant human enterovirus 71 in hand, foot and mouth disease patients","volume":"10","author":"Chan","year":"2004","journal-title":"Emerg. Infect. Dis."},{"key":"10.1016\/j.meegid.2010.06.019_bib0070","doi-asserted-by":"crossref","first-page":"1807","DOI":"10.1007\/s00705-007-1018-x","article-title":"Mosaic genome structure of echovirus 30 that circulated in Taiwan in 2001","volume":"152","author":"Chen","year":"2007","journal-title":"Arch. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0075","doi-asserted-by":"crossref","first-page":"56","DOI":"10.1016\/j.virol.2004.04.026","article-title":"Molecular comparison of echovirus 11 strains circulating in Europe during an epidemic of multisystem hemorrhagic disease of infants indicates that evolution generally occurs by recombination","volume":"325","author":"Chevaliez","year":"2004","journal-title":"Virology"},{"key":"10.1016\/j.meegid.2010.06.019_bib0080","doi-asserted-by":"crossref","first-page":"1185","DOI":"10.1093\/molbev\/msi103","article-title":"Bayesian coalescent inference of past population dynamics from molecular sequences","volume":"22","author":"Drummond","year":"2005","journal-title":"Mol. Biol. Evol."},{"issue":"5","key":"10.1016\/j.meegid.2010.06.019_bib0085","doi-asserted-by":"crossref","first-page":"e88","DOI":"10.1371\/journal.pbio.0040088","article-title":"Relaxed phylogenetics and dating with confidence","volume":"4","author":"Drummond","year":"2006","journal-title":"PLoS Biol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0090","doi-asserted-by":"crossref","first-page":"214","DOI":"10.1186\/1471-2148-7-214","article-title":"BEAST: Bayesian evolutionary analysis by sampling trees","volume":"7","author":"Drummond","year":"2007","journal-title":"BMC Evol. Biol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0095","doi-asserted-by":"crossref","first-page":"573","DOI":"10.1093\/bioinformatics\/16.7.573","article-title":"Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences","volume":"16","author":"Gibbs","year":"2000","journal-title":"Bioinformatics"},{"key":"10.1016\/j.meegid.2010.06.019_bib0100","first-page":"95","article-title":"BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95\/98\/NT","volume":"41","author":"Hall","year":"1999","journal-title":"Nucl. Acids Symp. Ser."},{"key":"10.1016\/j.meegid.2010.06.019_bib0105","doi-asserted-by":"crossref","first-page":"11827","DOI":"10.1128\/JVI.01100-06","article-title":"Recombination patterns in aphthoviruses mirror those found in other picornaviruses","volume":"80","author":"Heath","year":"2006","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0110","first-page":"829","article-title":"Bayesian inference of population size history from multiple loci","volume":"23","author":"Heled","year":"2008","journal-title":"BMC Evol. Biol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0115","doi-asserted-by":"crossref","first-page":"570","DOI":"10.1093\/molbev\/msp274","article-title":"Bayesian inference of species trees from multilocus data","volume":"27","author":"Heled","year":"2010","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0120","series-title":"The Phylogenetic Handbook","first-page":"68","article-title":"Multiple sequence alignment","author":"Higgins","year":"2009"},{"key":"10.1016\/j.meegid.2010.06.019_bib0125","doi-asserted-by":"crossref","first-page":"e1000412","DOI":"10.1371\/journal.ppat.1000412","article-title":"Recombination between polioviruses and co-circulating coxsackie A viruses: role in the emergence of pathogenic vaccine-derived polioviruses","volume":"5","author":"Jegouic","year":"2009","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.meegid.2010.06.019_bib0130","doi-asserted-by":"crossref","first-page":"163","DOI":"10.1007\/s11262-009-0440-4","article-title":"Detection of non-polio enteroviruses in Hungary 2000\u20132008 and molecular epidemiology of enterovirus 71, coxsackievirus A16, and echovirus 30","volume":"40","author":"Kapusinszky","year":"2010","journal-title":"Virus Genes"},{"key":"10.1016\/j.meegid.2010.06.019_bib0135","doi-asserted-by":"crossref","first-page":"773","DOI":"10.1080\/01621459.1995.10476572","article-title":"Bayes factors and model uncertainty","volume":"90","author":"Kass","year":"1995","journal-title":"J. Am. Stat. Assoc."},{"key":"10.1016\/j.meegid.2010.06.019_bib0140","doi-asserted-by":"crossref","first-page":"356","DOI":"10.1126\/science.1068284","article-title":"Outbreak of poliomyelitis in Hispaniola associated with circulating type 1 vaccine-derived poliovirus","volume":"296","author":"Kew","year":"2002","journal-title":"Science"},{"key":"10.1016\/j.meegid.2010.06.019_bib0145","doi-asserted-by":"crossref","first-page":"889","DOI":"10.1097\/01.inf.0000237798.07462.32","article-title":"Neonatal enterovirus infections reported to the national enterovirus surveillance system in the United States, 1983\u20132003","volume":"25","author":"Khetsuriani","year":"2006","journal-title":"Pediatr. Infect. Dis. J."},{"key":"10.1016\/j.meegid.2010.06.019_bib0150","doi-asserted-by":"crossref","first-page":"107","DOI":"10.1016\/0042-6822(63)90145-4","article-title":"Genetic recombination with poliovirus type 1Studies of crosses between a normal horse serum-resistant mutant and several guanidine-resistant mutants of the same strain","volume":"20","author":"Ledinko","year":"1963","journal-title":"Virology"},{"key":"10.1016\/j.meegid.2010.06.019_bib0155","doi-asserted-by":"crossref","first-page":"1059","DOI":"10.1534\/genetics.104.026666","article-title":"The molecular population genetics of HIV-1 group O","volume":"167","author":"Lemey","year":"2004","journal-title":"Genetics"},{"key":"10.1016\/j.meegid.2010.06.019_bib0160","series-title":"The Phylogenetic Handbook","first-page":"493","article-title":"Introduction to recombination","author":"Lemey","year":"2009"},{"key":"10.1016\/j.meegid.2010.06.019_bib0165","doi-asserted-by":"crossref","first-page":"1223","DOI":"10.1099\/vir.0.18971-0","article-title":"Evolution of the genome of Human enterovirus B: incongruence between phylogenies of the VP1 and 3CD regions indicates frequent recombination within the species","volume":"84","author":"Lindberg","year":"2003","journal-title":"J. Gen. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0170","doi-asserted-by":"crossref","first-page":"152","DOI":"10.1128\/JVI.73.1.152-160.1999","article-title":"Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination","volume":"73","author":"Lole","year":"1999","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0175","doi-asserted-by":"crossref","first-page":"10423","DOI":"10.1128\/JVI.77.19.10423-10431.2003","article-title":"Recombination in circulating enteroviruses","volume":"77","author":"Lukashev","year":"2003","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0180","doi-asserted-by":"crossref","first-page":"463","DOI":"10.1099\/vir.0.19469-0","article-title":"Recombination in uveitis-causing enterovirus strains","volume":"85","author":"Lukashev","year":"2004","journal-title":"J. Gen. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0185","doi-asserted-by":"crossref","first-page":"3281","DOI":"10.1099\/vir.0.81264-0","article-title":"Recombination in circulating human enterovirus B: independent evolution of structural and non structural genome regions","volume":"86","author":"Lukashev","year":"2005","journal-title":"J. Gen. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0190","doi-asserted-by":"crossref","first-page":"441","DOI":"10.1002\/jmv.21707","article-title":"An aseptic meningitis outbreak caused by echovirus 6 in Anhui Province China","volume":"82","author":"Mao","year":"2010","journal-title":"J. Med. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0195","doi-asserted-by":"crossref","first-page":"562","DOI":"10.1093\/bioinformatics\/16.6.562","article-title":"RDP: detection of recombination amongst aligned sequences","volume":"16","author":"Martin","year":"2000","journal-title":"Bioinformatics"},{"key":"10.1016\/j.meegid.2010.06.019_bib0200","doi-asserted-by":"crossref","first-page":"98","DOI":"10.1089\/aid.2005.21.98","article-title":"A modified BOOTSCAN algorithm for automated identification of recombinant sequences and recombination breakpoints","volume":"21","author":"Martin","year":"2005","journal-title":"AIDS Res. Hum. Retroviruses"},{"key":"10.1016\/j.meegid.2010.06.019_bib0205","first-page":"126","article-title":"Analyzing the mosaic structure of genes","volume":"34","author":"Maynard Smith","year":"1992","journal-title":"J. Mol. Evol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0210","doi-asserted-by":"crossref","first-page":"2109","DOI":"10.1128\/JVI.02109-08","article-title":"Transmission networks and population turnover of echovirus 30","volume":"83","author":"McWilliam Leitch","year":"2009","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0215","doi-asserted-by":"crossref","first-page":"1624","DOI":"10.1002\/jmv.20747","article-title":"Prospective identification of HEV-B enteroviruses during the 2005 outbreak","volume":"78","author":"Mirand","year":"2006","journal-title":"J. Med. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0220","doi-asserted-by":"crossref","first-page":"166","DOI":"10.1099\/vir.0.82146-0","article-title":"Emergence of recent echovirus 30 lineages is marked by serial genetic recombination events","volume":"88","author":"Mirand","year":"2007","journal-title":"J. Gen. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0225","doi-asserted-by":"crossref","first-page":"87","DOI":"10.1128\/JCM.01020-07","article-title":"Prospective identification of enteroviruses involved in meningitis in 2006 through direct genotyping in cerebrospinal fluid","volume":"46","author":"Mirand","year":"2008","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0230","doi-asserted-by":"crossref","DOI":"10.1099\/vir.0.021741-0","article-title":"Phylogenetic evidence for a recent dissemination of two populations of human enterovirus 71 in European countries","author":"Mirand","year":"2010","journal-title":"J. Gen. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0235","doi-asserted-by":"crossref","first-page":"3928","DOI":"10.1128\/JCM.37.12.3928-3933.1999","article-title":"Molecular epidemiology and genetic diversity of echovirus type 30 (E30): genotypes correlate with temporal dynamics of E30 isolation","volume":"37","author":"Oberste","year":"1999","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0240","doi-asserted-by":"crossref","first-page":"1941","DOI":"10.1128\/JVI.73.3.1941-1948.1999","article-title":"Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification","volume":"73","author":"Oberste","year":"1999","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0245","doi-asserted-by":"crossref","first-page":"855","DOI":"10.1128\/JVI.78.2.855-867.2004","article-title":"Evidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes","volume":"78","author":"Oberste","year":"2004","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0250","doi-asserted-by":"crossref","first-page":"2948","DOI":"10.1128\/JVI.78.6.2948-2955.2004","article-title":"RNA recombination plays a major role in genomic change during circulation of coxsackie B viruses","volume":"78","author":"Oberste","year":"2004","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0255","doi-asserted-by":"crossref","first-page":"2193","DOI":"10.1099\/0022-1317-83-9-2193","article-title":"Natural genetic recombination between co-circulating heterotypic enteroviruses","volume":"83","author":"Oprisan","year":"2002","journal-title":"J. Gen. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0260","doi-asserted-by":"crossref","first-page":"317","DOI":"10.1002\/jmv.21374","article-title":"Epidemiology of enterovirus types causing neurological disease in Austria 1999\u20132007: detection of clusters of echovirus 30 and enterovirus 71 and analysis of prevalent genotypes","volume":"81","author":"Ortner","year":"2009","journal-title":"J. Med. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0265","doi-asserted-by":"crossref","first-page":"218","DOI":"10.1006\/viro.1999.0056","article-title":"Possible emergence of new geminiviruses by frequent recombination","volume":"265","author":"Padidam","year":"1999","journal-title":"Virology"},{"key":"10.1016\/j.meegid.2010.06.019_bib0270","doi-asserted-by":"crossref","first-page":"4940","DOI":"10.1128\/JVI.76.10.4940-4949.2002","article-title":"Molecular epidemiology of echovirus 30: temporal circulation and prevalence of single lineages","volume":"76","author":"Palacios","year":"2002","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0275","series-title":"Fields Virology","first-page":"839","article-title":"Enteroviruses: polioviruses, coxsackieviruses, echoviruses and newer enteroviruses","author":"Pallansch","year":"2007"},{"key":"10.1016\/j.meegid.2010.06.019_bib0280","doi-asserted-by":"crossref","first-page":"682","DOI":"10.1007\/s10096-008-0685-1","article-title":"Molecular epidemiology of echovirus 6 in Greece","volume":"28","author":"Papa","year":"2009","journal-title":"Eur. J. Clin. Microbiol. Infect. Dis."},{"key":"10.1016\/j.meegid.2010.06.019_bib0285","doi-asserted-by":"crossref","first-page":"817","DOI":"10.1093\/bioinformatics\/14.9.817","article-title":"MODELTEST: testing the model of DNA substitution","volume":"14","author":"Posada","year":"1998","journal-title":"Bioinformatics"},{"key":"10.1016\/j.meegid.2010.06.019_bib0290","doi-asserted-by":"crossref","first-page":"13757","DOI":"10.1073\/pnas.241370698","article-title":"Evaluation of methods for detecting recombination from DNA sequences: computer simulations","volume":"98","author":"Posada","year":"2001","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.meegid.2010.06.019_bib0295","doi-asserted-by":"crossref","first-page":"75","DOI":"10.1146\/annurev.genet.36.040202.111115","article-title":"Recombination in evolutionary genomics","volume":"36","author":"Posada","year":"2002","journal-title":"Annu. Rev. Genet."},{"key":"10.1016\/j.meegid.2010.06.019_bib0300","doi-asserted-by":"crossref","first-page":"793","DOI":"10.1080\/10635150490522304","article-title":"Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests","volume":"53","author":"Posada","year":"2004","journal-title":"Syst. Biol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0305","series-title":"Fields Virology","first-page":"795","article-title":"Picornaviridae: the viruses and their replication","author":"Racaniello","year":"2007"},{"issue":"12","key":"10.1016\/j.meegid.2010.06.019_bib0310","doi-asserted-by":"crossref","first-page":"e191","DOI":"10.1371\/journal.ppat.0030191","article-title":"Co-circulation and evolution of polioviruses and species C enteroviruses in a district of Madagascar","volume":"3","author":"Rakoto-Andrianarivelo","year":"2007","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.meegid.2010.06.019_bib0315","first-page":"1035","article-title":"Molecular typing of enteroviruses associated with meningitis in Cyprus, 2000\u20132002","volume":"55","author":"Richter","year":"2006","journal-title":"J. Gen. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0320","doi-asserted-by":"crossref","first-page":"485","DOI":"10.1016\/S0022-5193(05)80104-3","article-title":"The general stochastic model of nucleotide substitution","volume":"142","author":"Rodr\u00edguez","year":"1990","journal-title":"J. Theor. Biol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0325","doi-asserted-by":"crossref","first-page":"956","DOI":"10.1002\/jmv.20917","article-title":"Epidemiologic aspects and laboratory features of enteroviruses infections in Western Germany 2000\u20132005","volume":"79","author":"Roth","year":"2007","journal-title":"J. Med. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0330","doi-asserted-by":"crossref","first-page":"340","DOI":"10.1126\/science.1154137","article-title":"The global circulation of seasonal influenza A (H3N2) viruses","volume":"320","author":"Russell","year":"2008","journal-title":"Science"},{"key":"10.1016\/j.meegid.2010.06.019_bib0335","doi-asserted-by":"crossref","first-page":"1423","DOI":"10.1089\/aid.1995.11.1423","article-title":"Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning","volume":"11","author":"Salminen","year":"1995","journal-title":"AIDS Res. Hum. Retroviruses"},{"key":"10.1016\/j.meegid.2010.06.019_bib0340","series-title":"The Phylogenetic Handbook","first-page":"519","article-title":"Detecting and characterizing individual recombination events","author":"Salminen","year":"2009"},{"key":"10.1016\/j.meegid.2010.06.019_bib0345","doi-asserted-by":"crossref","first-page":"8741","DOI":"10.1128\/JVI.73.10.8741-8749.1999","article-title":"Evidence of recombination among enteroviruses","volume":"73","author":"Santti","year":"1999","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0350","doi-asserted-by":"crossref","first-page":"521","DOI":"10.1007\/s007050170160","article-title":"Molecular epidemiology of echovirus 30 in Europe: succession of dominant sublineages within a single major genotype","volume":"146","author":"Savolainen","year":"2001","journal-title":"Arch. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0355","doi-asserted-by":"crossref","first-page":"879","DOI":"10.1093\/genetics\/156.2.879","article-title":"Consequences of recombination on traditional phylogenetic analysis","volume":"156","author":"Schierup","year":"2000","journal-title":"Genetics"},{"key":"10.1016\/j.meegid.2010.06.019_bib0360","doi-asserted-by":"crossref","first-page":"13512","DOI":"10.1128\/JVI.78.24.13512-13521.2004","article-title":"Circulation of type 1 vaccine-derived poliovirus in the Philippines in 2001","volume":"78","author":"Shimizu","year":"2004","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0365","doi-asserted-by":"crossref","first-page":"11124","DOI":"10.1128\/JVI.01076-06","article-title":"Recombination and selection in the evolution of picornaviruses and other mammalian positive-stranded RNA viruses","volume":"80","author":"Simmonds","year":"2006","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0370","series-title":"Virus Taxonomy. Eighth Report of the International Committee on Taxonomy of Viruses","first-page":"757","article-title":"Family Picornaviridae","author":"Stanway","year":"2005"},{"key":"10.1016\/j.meegid.2010.06.019_bib0375","doi-asserted-by":"crossref","first-page":"1001","DOI":"10.1093\/oxfordjournals.molbev.a003872","article-title":"Bayesian selection of continuous-time Markov chain evolutionary models","volume":"18","author":"Suchard","year":"2001","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0380","series-title":"PAUP*: Phylogenetic Analysis Using Parsimony (*and Pother methods), Version 4.0 [computer program]","author":"Swofford","year":"2003"},{"key":"10.1016\/j.meegid.2010.06.019_bib0385","doi-asserted-by":"crossref","first-page":"420","DOI":"10.1002\/jmv.10412","article-title":"Molecular typing and epidemiology of enteroviruses identified from an outbreak of aseptic meningitis in Belgium during the summer of 2000","volume":"70","author":"Thoelen","year":"2003","journal-title":"J. Med. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0390","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1007\/BF00163848","article-title":"Inching toward reality: an improved likelihood model of sequence evolution","volume":"34","author":"Thorne","year":"1992","journal-title":"J. Mol. Evol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0395","doi-asserted-by":"crossref","first-page":"7352","DOI":"10.1073\/pnas.96.13.7352","article-title":"Widespread intra-serotype recombination in natural populations of dengue virus","volume":"96","author":"Worobey","year":"1999","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.meegid.2010.06.019_bib0400","doi-asserted-by":"crossref","first-page":"2535","DOI":"10.1099\/0022-1317-80-10-2535","article-title":"Evolutionary aspects of recombination in RNA viruses","volume":"80","author":"Worobey","year":"1999","journal-title":"J. Gen. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0405","doi-asserted-by":"crossref","first-page":"1425","DOI":"10.1093\/oxfordjournals.molbev.a003928","article-title":"A novel approach to detecting and measuring recombination: new insights into evolution in viruses, bacteria, and mitochondria","volume":"18","author":"Worobey","year":"2001","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0410","doi-asserted-by":"crossref","first-page":"8366","DOI":"10.1128\/JVI.77.15.8366-8377.2003","article-title":"Circulation of endemic type 2 vaccine-derived poliovirus in Egypt from 1983 to 1993","volume":"77","author":"Yang","year":"2003","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0415","doi-asserted-by":"crossref","first-page":"197","DOI":"10.1007\/s00705-009-0564-9","article-title":"A Sabin 2-related poliovirus recombinant contains a homologous sequence of human enterovirus species C in the viral polymerase coding region","volume":"155","author":"Zhang","year":"2010","journal-title":"Arch. Virol."},{"key":"10.1016\/j.meegid.2010.06.019_bib0420","doi-asserted-by":"crossref","first-page":"11273","DOI":"10.1128\/JVI.76.22.11273-11282.2002","article-title":"Human immunodeficiency virus type 1 recombination: rate, fidelity, and putative hot spots","volume":"76","author":"Zhuang","year":"2002","journal-title":"J. Virol."}],"container-title":["Infection, Genetics and Evolution"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1567134810001875?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1567134810001875?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2021,10,31]],"date-time":"2021-10-31T00:50:44Z","timestamp":1635641444000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1567134810001875"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2011,3]]},"references-count":84,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2011,3]]}},"alternative-id":["S1567134810001875"],"URL":"https:\/\/doi.org\/10.1016\/j.meegid.2010.06.019","relation":{},"ISSN":["1567-1348"],"issn-type":[{"value":"1567-1348","type":"print"}],"subject":[],"published":{"date-parts":[[2011,3]]}}}