{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,12]],"date-time":"2026-05-12T19:56:52Z","timestamp":1778615812212,"version":"3.51.4"},"reference-count":36,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2013,3,1]],"date-time":"2013-03-01T00:00:00Z","timestamp":1362096000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"funder":[{"name":"President of the Russian Federation","award":["NSh-2996.2012.4"],"award-info":[{"award-number":["NSh-2996.2012.4"]}]},{"name":"Russian Federal","award":["02.740.11.0767"],"award-info":[{"award-number":["02.740.11.0767"]}]},{"name":"14.B37.21.1112","award":["Research and scientific-educational cadres of innovative Russia"],"award-info":[{"award-number":["Research and scientific-educational cadres of innovative Russia"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Infection, Genetics and Evolution"],"published-print":{"date-parts":[[2013,3]]},"DOI":"10.1016\/j.meegid.2012.12.023","type":"journal-article","created":{"date-parts":[[2013,1,9]],"date-time":"2013-01-09T01:39:35Z","timestamp":1357695575000},"page":"265-274","source":"Crossref","is-referenced-by-count":28,"special_numbering":"C","title":["Evolutionary time-scale of primate bocaviruses"],"prefix":"10.1016","volume":"14","author":[{"given":"Igor V.","family":"Babkin","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alexander I.","family":"Tyumentsev","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Artem Yu.","family":"Tikunov","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alexander M.","family":"Kurilshikov","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Elena I.","family":"Ryabchikova","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Elena V.","family":"Zhirakovskaya","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sergei V.","family":"Netesov","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nina V.","family":"Tikunova","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/j.meegid.2012.12.023_b0005","doi-asserted-by":"crossref","first-page":"12891","DOI":"10.1073\/pnas.0504666102","article-title":"Cloning of a human parvovirus by molecular screening of respiratory tract samples","volume":"102","author":"Allander","year":"2005","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.meegid.2012.12.023_b0010","doi-asserted-by":"crossref","first-page":"e1000391","DOI":"10.1371\/journal.ppat.1000391","article-title":"A novel bocavirus associated with acute gastroenteritis in Australian children","volume":"5","author":"Arthur","year":"2009","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.meegid.2012.12.023_b0015","doi-asserted-by":"crossref","first-page":"105","DOI":"10.1016\/S1386-6532(99)00027-X","article-title":"Diagnostic electron microscopy is still a timely and rewarding method","volume":"13","author":"Biel","year":"1999","journal-title":"J. Clin. Virol."},{"key":"10.1016\/j.meegid.2012.12.023_b0020","doi-asserted-by":"crossref","first-page":"3419","DOI":"10.1128\/JCM.00545-07","article-title":"Electron microscopy observation of human bocavirus (HBoV) in nasopharyngeal samples from HBoV-infected children","volume":"45","author":"Brieu","year":"2007","journal-title":"J. Clin. Microbiol."},{"issue":"9","key":"10.1016\/j.meegid.2012.12.023_b0025","doi-asserted-by":"crossref","first-page":"1767","DOI":"10.1007\/s00705-012-1343-6","article-title":"Detection of human bocaviruses 1, 2 and 3 in Irish children presenting with gastroenteritis","volume":"157","author":"Cashman","year":"2012","journal-title":"Arch. Virol."},{"key":"10.1016\/j.meegid.2012.12.023_b0030","doi-asserted-by":"crossref","first-page":"145","DOI":"10.1016\/j.virol.2010.04.014","article-title":"Characterization of the gene expression profile of human bocavirus","volume":"403","author":"Chen","year":"2010","journal-title":"Virology"},{"key":"10.1016\/j.meegid.2012.12.023_b0035","doi-asserted-by":"crossref","first-page":"50","DOI":"10.1186\/1471-2334-11-50","article-title":"Phylogenetic and recombination analysis of human bocavirus 2","volume":"11","author":"Cheng","year":"2011","journal-title":"BMC Infect. Dis."},{"key":"10.1016\/j.meegid.2012.12.023_b0040","doi-asserted-by":"crossref","first-page":"e13583","DOI":"10.1371\/journal.pone.0013583","article-title":"Identification and nearly full-length genome characterization of novel porcine bocaviruses","volume":"5","author":"Cheng","year":"2010","journal-title":"PloS One"},{"key":"10.1016\/j.meegid.2012.12.023_b0045","doi-asserted-by":"crossref","first-page":"91","DOI":"10.1016\/j.micron.2005.10.001","article-title":"Application of transmission electron microscopy to the clinical study of viral and bacterial infections: present and future","volume":"37","author":"Curry","year":"2006","journal-title":"Micron"},{"key":"10.1016\/j.meegid.2012.12.023_b0050","doi-asserted-by":"crossref","first-page":"7739","DOI":"10.1128\/JVI.00614-09","article-title":"Human bocavirus can be cultured in differentiated human airway epithelial cells","volume":"83","author":"Dijkman","year":"2009","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2012.12.023_b0055","doi-asserted-by":"crossref","first-page":"214","DOI":"10.1186\/1471-2148-7-214","article-title":"BEAST: Bayesian evolutionary analysis by sampling trees","volume":"7","author":"Drummond","year":"2007","journal-title":"BMC Evol. Biol."},{"issue":"4","key":"10.1016\/j.meegid.2012.12.023_b0060","doi-asserted-by":"crossref","first-page":"267","DOI":"10.1038\/nrg2323","article-title":"Rates of evolutionary change in viruses: patterns and determinants","volume":"9","author":"Duffy","year":"2008","journal-title":"Nat. Rev. Genet."},{"key":"10.1016\/j.meegid.2012.12.023_b0065","doi-asserted-by":"crossref","first-page":"182","DOI":"10.1186\/1743-422X-8-182","article-title":"Recombination analysis based on the complete genome of bocavirus","volume":"8","author":"Fu","year":"2011","journal-title":"Virol. J."},{"key":"10.1016\/j.meegid.2012.12.023_b0070","doi-asserted-by":"crossref","first-page":"5880","DOI":"10.1128\/JVI.02719-09","article-title":"Human bocavirus capsid structure: insights into the structural repertoire of the Parvoviridae","volume":"84","author":"Gurda","year":"2010","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2012.12.023_b0075","first-page":"95","article-title":"BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95\/98\/NT","volume":"41","author":"Hall","year":"1999","journal-title":"Nucleic Acids Symp. Ser."},{"key":"10.1016\/j.meegid.2012.12.023_b0080","doi-asserted-by":"crossref","first-page":"174","DOI":"10.1017\/S0094837300016778","article-title":"Maximum likelihood estimation of phylogeny using stratigraphic data","volume":"23","author":"Huelsenbeck","year":"1997","journal-title":"Paleobiology"},{"key":"10.1016\/j.meegid.2012.12.023_b0085","doi-asserted-by":"crossref","first-page":"46","DOI":"10.1002\/rmv.720","article-title":"Human bocavirus-the first 5 years","volume":"22","author":"Jartti","year":"2012","journal-title":"Rev. Med. Virol."},{"key":"10.1016\/j.meegid.2012.12.023_b0090","doi-asserted-by":"crossref","first-page":"e21362","DOI":"10.1371\/journal.pone.0021362","article-title":"Bocavirus episome in infected human tissue contains non-identical termini","volume":"6","author":"Kapoor","year":"2011","journal-title":"PLoS One"},{"issue":"7","key":"10.1016\/j.meegid.2012.12.023_b0095","doi-asserted-by":"crossref","first-page":"e11948","DOI":"10.1371\/journal.pone.0011948","article-title":"Identification and characterization of a new bocavirus species in gorillas","volume":"5","author":"Kapoor","year":"2010","journal-title":"PLoS One"},{"key":"10.1016\/j.meegid.2012.12.023_b0100","doi-asserted-by":"crossref","first-page":"1633","DOI":"10.1086\/652416","article-title":"Human bocaviruses are highly diverse, dispersed, recombination prone, and prevalent in enteric infections","volume":"201","author":"Kapoor","year":"2010","journal-title":"J. Infect. Dis."},{"key":"10.1016\/j.meegid.2012.12.023_b0105","doi-asserted-by":"crossref","first-page":"196","DOI":"10.1086\/595831","article-title":"A newly identified bocavirus species in human stool","volume":"199","author":"Kapoor","year":"2009","journal-title":"J. Infect. Dis."},{"key":"10.1016\/j.meegid.2012.12.023_b0110","doi-asserted-by":"crossref","first-page":"1208","DOI":"10.1093\/molbev\/msi105","article-title":"Not so different after all: a comparison of methods for detecting amino acid sites under selection","volume":"22","author":"Kosakovsky Pond","year":"2005","journal-title":"Mol. Biol. Evol."},{"issue":"7","key":"10.1016\/j.meegid.2012.12.023_b0115","doi-asserted-by":"crossref","first-page":"986","DOI":"10.1086\/521310","article-title":"Clinical and molecular epidemiology of human bocavirus in respiratory and fecal samples from children in Hong Kong","volume":"196","author":"Lau","year":"2007","journal-title":"J. Infect. Dis."},{"key":"10.1016\/j.meegid.2012.12.023_b0120","doi-asserted-by":"crossref","first-page":"1877","DOI":"10.1093\/molbev\/msq067","article-title":"Phylogeography takes a relaxed random walk in continuous space and time","volume":"27","author":"Lemey","year":"2010","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.meegid.2012.12.023_b0125","doi-asserted-by":"crossref","first-page":"1107","DOI":"10.2217\/fvl.11.78","article-title":"Human bocavirus: still more questions than answers","volume":"9","author":"Malecki","year":"2011","journal-title":"Future Virol."},{"issue":"2","key":"10.1016\/j.meegid.2012.12.023_b0130","doi-asserted-by":"crossref","first-page":"127","DOI":"10.1016\/j.jcv.2010.03.014","article-title":"Human bocavirus species 2 and 3 in Brazil","volume":"48","author":"Santos","year":"2010","journal-title":"J. Clin. Virol."},{"issue":"20","key":"10.1016\/j.meegid.2012.12.023_b0135","doi-asserted-by":"crossref","first-page":"2493","DOI":"10.1093\/bioinformatics\/btl427","article-title":"Robust inference of positive selection from recombining coding sequences","volume":"22","author":"Scheffler","year":"2006","journal-title":"Bioinformatics"},{"issue":"1","key":"10.1016\/j.meegid.2012.12.023_b0140","doi-asserted-by":"crossref","first-page":"31","DOI":"10.2217\/fvl.11.136","article-title":"Genomic features of the human bocaviruses","volume":"7","author":"Schildgen","year":"2012","journal-title":"Future Virol."},{"key":"10.1016\/j.meegid.2012.12.023_b0145","doi-asserted-by":"crossref","first-page":"7","DOI":"10.1093\/molbev\/msj021","article-title":"Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences","volume":"23","author":"Shapiro","year":"2006","journal-title":"Mol. Biol. Evol."},{"issue":"19","key":"10.1016\/j.meegid.2012.12.023_b0150","doi-asserted-by":"crossref","first-page":"10289","DOI":"10.1128\/JVI.01304-10","article-title":"Widespread infection with homologues of human parvoviruses B19, PARV4, and human bocavirus of chimpanzees and gorillas in the wild","volume":"84","author":"Sharp","year":"2010","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2012.12.023_b0155","doi-asserted-by":"crossref","first-page":"324","DOI":"10.3201\/eid1602.090553","article-title":"Novel human bocavirus in children with acute respiratory tract infection","volume":"16","author":"Song","year":"2010","journal-title":"Emerg. Infect. Dis."},{"key":"10.1016\/j.meegid.2012.12.023_b0160","doi-asserted-by":"crossref","first-page":"3956","DOI":"10.1128\/JVI.02569-08","article-title":"Molecular characterization of infectious clones of the minute virus of canines reveals unique features of bocaviruses","volume":"83","author":"Sun","year":"2009","journal-title":"J. Virol."},{"key":"10.1016\/j.meegid.2012.12.023_b0165","doi-asserted-by":"crossref","first-page":"2731","DOI":"10.1093\/molbev\/msr121","article-title":"MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods","volume":"28","author":"Tamura","year":"2011","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.meegid.2012.12.023_b0170","doi-asserted-by":"crossref","first-page":"4876","DOI":"10.1093\/nar\/25.24.4876","article-title":"The CLUSTAL_X windows interface. flexible strategies for multiple sequence alignment aided by quality analysis tools","volume":"25","author":"Thompson","year":"1997","journal-title":"Nucleic Acids Res."},{"issue":"2","key":"10.1016\/j.meegid.2012.12.023_b0175","doi-asserted-by":"crossref","first-page":"215","DOI":"10.1016\/j.meegid.2009.11.011","article-title":"Rapid molecular evolution of human bocavirus revealed by Bayesian coalescent inference","volume":"10","author":"Zehender","year":"2010","journal-title":"Infect. Genet. Evol."},{"key":"10.1016\/j.meegid.2012.12.023_b0180","doi-asserted-by":"crossref","first-page":"784","DOI":"10.1099\/vir.0.028340-0","article-title":"Complete coding sequences and phylogenetic analysis of porcine bocavirus (PBoV)","volume":"92","author":"Zeng","year":"2011","journal-title":"J. Gen. Virol."}],"container-title":["Infection, Genetics and Evolution"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1567134813000087?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1567134813000087?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2018,10,19]],"date-time":"2018-10-19T16:34:29Z","timestamp":1539966869000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1567134813000087"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013,3]]},"references-count":36,"alternative-id":["S1567134813000087"],"URL":"https:\/\/doi.org\/10.1016\/j.meegid.2012.12.023","relation":{},"ISSN":["1567-1348"],"issn-type":[{"value":"1567-1348","type":"print"}],"subject":[],"published":{"date-parts":[[2013,3]]}}}