{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,1]],"date-time":"2026-02-01T05:37:46Z","timestamp":1769924266931,"version":"3.49.0"},"reference-count":84,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2016,10,1]],"date-time":"2016-10-01T00:00:00Z","timestamp":1475280000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2016,10,1]],"date-time":"2016-10-01T00:00:00Z","timestamp":1475280000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"}],"funder":[{"DOI":"10.13039\/100010269","name":"Wellcome Trust","doi-asserted-by":"publisher","award":["086789\/ZA\/08\/Z"],"award-info":[{"award-number":["086789\/ZA\/08\/Z"]}],"id":[{"id":"10.13039\/100010269","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000061","name":"Fogarty International Center","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000061","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000180","name":"U.S. Department of Homeland Security","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000180","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100008287","name":"Science and Technology Directorate","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100008287","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Infection, Genetics and Evolution"],"published-print":{"date-parts":[[2016,10]]},"DOI":"10.1016\/j.meegid.2016.07.033","type":"journal-article","created":{"date-parts":[[2016,7,28]],"date-time":"2016-07-28T04:39:31Z","timestamp":1469680771000},"page":"382-394","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":44,"special_numbering":"C","title":["Phylogenetic and geographic patterns of bartonella host shifts among bat species"],"prefix":"10.1016","volume":"44","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-6149-0598","authenticated-orcid":false,"given":"Clifton D.","family":"McKee","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"David T.S.","family":"Hayman","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michael Y.","family":"Kosoy","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Colleen T.","family":"Webb","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/j.meegid.2016.07.033_bb0005","doi-asserted-by":"crossref","DOI":"10.1371\/currents.RRN1212","article-title":"A time-calibrated species-level phylogeny of bats (Chiroptera, Mammalia)","volume":"3","author":"Agnarsson","year":"2011","journal-title":"PLoS Curr"},{"key":"10.1016\/j.meegid.2016.07.033_bb0010","doi-asserted-by":"crossref","first-page":"73","DOI":"10.3161\/15081109ACC2016.18.1.003","article-title":"The evolutionary history of the African fruit bats (Chiroptera: Pteropodidae)","volume":"18","author":"Almeida","year":"2016","journal-title":"Acta Chiropterol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0015","doi-asserted-by":"crossref","first-page":"1266","DOI":"10.3201\/eid2107.141760","article-title":"Diversity of Bartonella spp. in bats, southern Vietnam","volume":"21","author":"Anh","year":"2015","journal-title":"Emerg. Infect. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0020","doi-asserted-by":"crossref","first-page":"314","DOI":"10.1016\/j.vetmic.2010.05.017","article-title":"Enrichment culture and molecular identification of diverse Bartonella species in stray dogs","volume":"146","author":"Bai","year":"2010","journal-title":"Vet. Microbiol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0025","doi-asserted-by":"crossref","first-page":"1269","DOI":"10.3201\/eid1707.101867","article-title":"Bartonella spp. in bats, Guatemala","volume":"17","author":"Bai","year":"2011","journal-title":"Emerg. Infect. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0030","doi-asserted-by":"crossref","first-page":"518","DOI":"10.4269\/ajtmh.2012.12-0097","article-title":"Prevalence and diversity of Bartonella spp. in bats in Peru","volume":"87","author":"Bai","year":"2012","journal-title":"Am.J.Trop. Med. Hyg"},{"key":"10.1016\/j.meegid.2016.07.033_bb0035","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pntd.0003478","article-title":"Classification of Bartonella strains associated with straw-colored fruit bats (Eidolon helvum) across Africa using a multi-locus sequence typing platform","volume":"9","author":"Bai","year":"2015","journal-title":"PLoS Negl. Trop. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0040","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0061048","article-title":"PACo: a novel procrustes application to cophylogenetic analysis","volume":"8","author":"Balbuena","year":"2013","journal-title":"PLoS One"},{"key":"10.1016\/j.meegid.2016.07.033_bb0045","doi-asserted-by":"crossref","first-page":"2241","DOI":"10.1111\/j.1365-294X.2010.04646.x","article-title":"Rapid diversification by recombination in Bartonella grahamii from wild rodents in Asia contrasts with low levels of genomic divergence in Northern Europe and America","volume":"19","author":"Berglund","year":"2010","journal-title":"Mol. Ecol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0050","doi-asserted-by":"crossref","first-page":"538","DOI":"10.1126\/science.1121360","article-title":"A virus reveals population structure and recent demographic history of its carnivore host","volume":"311","author":"Biek","year":"2006","journal-title":"Science"},{"key":"10.1016\/j.meegid.2016.07.033_bb0055","doi-asserted-by":"crossref","first-page":"324","DOI":"10.1017\/S0031182011002113","article-title":"Bartonella species in bat flies (Diptera: Nycteribiidae) from western Africa","volume":"139","author":"Billeter","year":"2012","journal-title":"Parasitology"},{"key":"10.1016\/j.meegid.2016.07.033_bb0060","author":"Bivand"},{"key":"10.1016\/j.meegid.2016.07.033_bb0065","series-title":"Applied Spatial Data Analysis with R","author":"Bivand","year":"2013"},{"key":"10.1016\/j.meegid.2016.07.033_bb0070","doi-asserted-by":"crossref","first-page":"1889","DOI":"10.1111\/j.1600-0706.2011.19314.x","article-title":"Microparasite species richness in rodents is higher at lower latitudes and is associated with reduced litter size","volume":"120","author":"Bordes","year":"2011","journal-title":"Oikos"},{"key":"10.1016\/j.meegid.2016.07.033_bb0075","doi-asserted-by":"crossref","first-page":"960","DOI":"10.1644\/1545-1542(2001)082<0960:ATOTGS>2.0.CO;2","article-title":"A test of the genetic species concept: cytochrome-b sequences and mammals","volume":"82","author":"Bradley","year":"2001","journal-title":"J. Mammal"},{"key":"10.1016\/j.meegid.2016.07.033_bb0080","doi-asserted-by":"crossref","first-page":"8","DOI":"10.1111\/j.1476-4431.2009.00496.x","article-title":"Bartonellosis: an emerging infectious disease of zoonotic importance to animals and human beings","volume":"20","author":"Breitschwerdt","year":"2010","journal-title":"J. Vet. Emerg. Crit. Care"},{"key":"10.1016\/j.meegid.2016.07.033_bb0085","doi-asserted-by":"crossref","first-page":"E53","DOI":"10.1086\/684391","article-title":"Quantifying global drivers of zoonotic bat viruses: a process-based perspective","volume":"187","author":"Brierley","year":"2016","journal-title":"Am. Nat"},{"key":"10.1016\/j.meegid.2016.07.033_bb0090","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pntd.0003532","article-title":"Bartonella spp. in fruit bats and blood-feeding ectoparasites in Madagascar","volume":"9","author":"Brook","year":"2015","journal-title":"PLoS Negl. Trop. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0095","doi-asserted-by":"crossref","first-page":"227","DOI":"10.1016\/j.ympev.2009.02.005","article-title":"Molecular cophylogenetic relationships between European bats and their ectoparasitic mites (Acari, Spinturnicidae)","volume":"51","author":"Bruyndonckx","year":"2009","journal-title":"Mol. Phylogenet. Evol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0100","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0068956","article-title":"Deciphering Bartonella diversity, recombination, and host specificity in a rodent community","volume":"8","author":"Buffet","year":"2013","journal-title":"PLoS One"},{"key":"10.1016\/j.meegid.2016.07.033_bb0105","doi-asserted-by":"crossref","first-page":"743","DOI":"10.1111\/j.1365-2672.2010.04679.x","article-title":"Bartonellosis, an increasingly recognized zoonosis","volume":"109","author":"Chomel","year":"2010","journal-title":"J. Appl. Microbiol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0110","doi-asserted-by":"crossref","first-page":"29","DOI":"10.1051\/vetres\/2009011","article-title":"Ecological fitness and strategies of adaptation of Bartonella species to their hosts and vectors","volume":"40","author":"Chomel","year":"2009","journal-title":"Vet. Res"},{"key":"10.1016\/j.meegid.2016.07.033_bb0115","doi-asserted-by":"crossref","first-page":"489","DOI":"10.1017\/S0031182005008097","article-title":"Molecular characterization of haemoparasites infecting bats (Microchiroptera) in Cornwall, UK","volume":"131","author":"Concannon","year":"2005","journal-title":"Parasitology"},{"key":"10.1016\/j.meegid.2016.07.033_bb0120","article-title":"R: a language and environment for statistical computing. R found","author":"Core Team","year":"2015","journal-title":"Stat. Comput"},{"key":"10.1016\/j.meegid.2016.07.033_bb0125","doi-asserted-by":"crossref","first-page":"772","DOI":"10.1038\/nmeth.2109","article-title":"jModelTest 2: more models, new heuristics and parallel computing","volume":"9","author":"Darriba","year":"2012","journal-title":"Nat. Methods"},{"key":"10.1016\/j.meegid.2016.07.033_bb0130","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1111\/nph.12150","article-title":"Cospeciation vs host-shift speciation: methods for testing, evidence from natural associations and relation to coevolution","volume":"198","author":"de Vienne","year":"2013","journal-title":"New Phytol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0135","doi-asserted-by":"crossref","first-page":"214","DOI":"10.1186\/1471-2148-7-214","article-title":"BEAST: Bayesian evolutionary analysis by sampling trees","volume":"7","author":"Drummond","year":"2007","journal-title":"BMC Evol. Biol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0140","doi-asserted-by":"crossref","first-page":"1969","DOI":"10.1093\/molbev\/mss075","article-title":"Bayesian phylogenetics with BEAUti and the BEAST 1.7","volume":"29","author":"Drummond","year":"2012","journal-title":"Mol. Biol. Evol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0145","doi-asserted-by":"crossref","first-page":"526","DOI":"10.1111\/j.2006.0030-1299.15186.x","article-title":"Host traits and parasite species richness in even and odd-toed hoofed mammals, Artiodactyla and Perissodactyla","volume":"115","author":"Ezenwa","year":"2006","journal-title":"Oikos"},{"key":"10.1016\/j.meegid.2016.07.033_bb0150","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/0006-3207(92)91201-3","article-title":"Conservation evaluation and phylogenetic diversity","volume":"61","author":"Faith","year":"1992","journal-title":"Biol. Conserv"},{"key":"10.1016\/j.meegid.2016.07.033_bb0155","first-page":"20120196","article-title":"Simultaneously reconstructing viral cross-species transmission history and identifying the underlying constraints","volume":"368","author":"Faria","year":"2013","journal-title":"Philos. Trans. R. Soc. Lond. Ser. B Biol. Sci"},{"key":"10.1016\/j.meegid.2016.07.033_bb0160","doi-asserted-by":"crossref","first-page":"161","DOI":"10.1016\/j.ijppaw.2014.06.003","article-title":"Parasite and viral species richness of Southeast Asian bats: fragmentation of area distribution matters","volume":"3","author":"Gay","year":"2014","journal-title":"Int. J. Parasitol. Parasites Wildl"},{"key":"10.1016\/j.meegid.2016.07.033_bb0165","first-page":"77","article-title":"Molecular phylogenies and host-parasite cospeciation: gophers and lice as a model system","volume":"349","author":"Hafner","year":"1995","journal-title":"Philos. Trans. R. Soc. Lond. Ser. B Biol. Sci"},{"key":"10.1016\/j.meegid.2016.07.033_bb0170","doi-asserted-by":"crossref","first-page":"42","DOI":"10.1128\/CMR.05009-11","article-title":"Intruders below the radar: molecular pathogenesis of Bartonella spp","volume":"25","author":"Harms","year":"2012","journal-title":"Clin. Microbiol. Rev."},{"key":"10.1016\/j.meegid.2016.07.033_bb0175","doi-asserted-by":"crossref","first-page":"3195","DOI":"10.1002\/ece3.702","article-title":"Evolutionary history of rat-borne Bartonella: the importance of commensal rats in the dissemination of bacterial infections globally","volume":"3","author":"Hayman","year":"2013","journal-title":"Ecol. Evol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0180","series-title":"Applied Statistics for the Behavioral Sciences","author":"Hinkle","year":"2003"},{"key":"10.1016\/j.meegid.2016.07.033_bb0185","author":"IUCN"},{"key":"10.1016\/j.meegid.2016.07.033_bb0190","doi-asserted-by":"crossref","first-page":"1245","DOI":"10.1093\/molbev\/msn073","article-title":"Local adaptation and vector-mediated population structure in Plasmodium vivax malaria","volume":"25","author":"Joy","year":"2008","journal-title":"Mol. Biol. Evol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0195","doi-asserted-by":"crossref","first-page":"609","DOI":"10.1111\/zph.12188","article-title":"Bartonellae are prevalent and diverse in Costa Rican bats and bat flies","volume":"62","author":"Judson","year":"2015","journal-title":"Zoonoses Public Health"},{"key":"10.1016\/j.meegid.2016.07.033_bb0200","doi-asserted-by":"crossref","first-page":"596","DOI":"10.1006\/mpev.1999.0669","article-title":"Phylogeography of African fruitbats (Megachiroptera)","volume":"13","author":"Juste","year":"1999","journal-title":"Mol. Phylogenet. Evol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0205","doi-asserted-by":"crossref","first-page":"625","DOI":"10.1089\/vbz.2013.1541","article-title":"Bartonella species in bats (Chiroptera) and bat flies (Nycteribiidae) from Nigeria, West Africa","volume":"14","author":"Kamani","year":"2014","journal-title":"Vector-Borne Zoonotic Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0210","doi-asserted-by":"crossref","first-page":"11448","DOI":"10.1038\/ncomms11448","article-title":"Genomics reveals historic and contemporary transmission dynamics of a bacterial disease among wildlife and livestock","volume":"7","author":"Kamath","year":"2016","journal-title":"Nat. Commun"},{"key":"10.1016\/j.meegid.2016.07.033_bb0215","doi-asserted-by":"crossref","first-page":"772","DOI":"10.1093\/molbev\/mst010","article-title":"MAFFT multiple sequence alignment software version 7: improvements in performance and usability","volume":"30","author":"Katoh","year":"2013","journal-title":"Mol. Biol. Evol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0220","doi-asserted-by":"crossref","first-page":"6196","DOI":"10.1073\/pnas.86.16.6196","article-title":"Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers","volume":"86","author":"Kocher","year":"1989","journal-title":"Proc. Natl. Acad. Sci"},{"key":"10.1016\/j.meegid.2016.07.033_bb0225","doi-asserted-by":"crossref","first-page":"716","DOI":"10.1134\/S1062359010070071","article-title":"Ecological associations between bacteria of the genus Bartonella and mammals","volume":"37","author":"Kosoy","year":"2010","journal-title":"Biol. Bull"},{"key":"10.1016\/j.meegid.2016.07.033_bb0230","doi-asserted-by":"crossref","first-page":"1875","DOI":"10.3201\/eid1612.100601","article-title":"Bartonella spp. in bats, Kenya","volume":"16","author":"Kosoy","year":"2010","journal-title":"Emerg. Infect. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0235","doi-asserted-by":"crossref","first-page":"318","DOI":"10.1016\/S0966-842X(03)00143-4","article-title":"Gene-sequence-based criteria for species definition in bacteriology: the Bartonella paradigm","volume":"11","author":"La Scola","year":"2003","journal-title":"Trends Microbiol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0240","doi-asserted-by":"crossref","first-page":"217","DOI":"10.1080\/10635150252899734","article-title":"A statistical test for host-parasite coevolution","volume":"51","author":"Legendre","year":"2002","journal-title":"Syst. Biol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0245","doi-asserted-by":"crossref","first-page":"1239","DOI":"10.1111\/2041-210X.12425","article-title":"Should the Mantel test be used in spatial analysis?","volume":"6","author":"Legendre","year":"2015","journal-title":"Methods Ecol. Evol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0250","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pntd.0002738","article-title":"Contrasting patterns in mammal-bacteria coevolution: Bartonella and Leptospira in bats and rodents","volume":"8","author":"Lei","year":"2014","journal-title":"PLoS Negl. Trop. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0255","doi-asserted-by":"crossref","first-page":"500","DOI":"10.3201\/eid1603.081673","article-title":"Candidatus Bartonella mayotimonensis and endocarditis","volume":"16","author":"Lin","year":"2010","journal-title":"Emerg. Infect. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0260","doi-asserted-by":"crossref","first-page":"119","DOI":"10.1016\/j.vetmic.2011.09.031","article-title":"Identification of novel Bartonella spp. in bats and evidence of Asian gray shrew as a new potential reservoir of Bartonella","volume":"156","author":"Lin","year":"2012","journal-title":"Vet. Microbiol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0265","doi-asserted-by":"crossref","first-page":"496","DOI":"10.1111\/j.1466-8238.2006.00301.x","article-title":"Parasite species richness in carnivores: effects of host body mass, latitude, geographical range and population density","volume":"16","author":"Lindenfors","year":"2007","journal-title":"Glob. Ecol. Biogeogr"},{"key":"10.1016\/j.meegid.2016.07.033_bb0270","article-title":"Determining the phylogenetic and phylogeographic origin of highly pathogenic avian influenza (H7N3) in Mexico","volume":"9","author":"Lu","year":"2014","journal-title":"PLoS One"},{"key":"10.1016\/j.meegid.2016.07.033_bb0275","first-page":"e20122753","article-title":"A comparison of bats and rodents as reservoirs of zoonotic viruses: are bats special?","volume":"280","author":"Luis","year":"2013","journal-title":"Proc. R. Soc. Lond. Ser. B Biol. Sci"},{"key":"10.1016\/j.meegid.2016.07.033_bb0280","doi-asserted-by":"crossref","first-page":"1153","DOI":"10.1111\/ele.12491","article-title":"Network analysis of host-virus communities in bats and rodents reveals determinants of cross-species transmission","volume":"18","author":"Luis","year":"2015","journal-title":"Ecol. Lett"},{"key":"10.1016\/j.meegid.2016.07.033_bb0285","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0100172","article-title":"Bat distribution size or shape as determinant of viral richness in African bats","volume":"9","author":"Maganga","year":"2014","journal-title":"PLoS One"},{"key":"10.1016\/j.meegid.2016.07.033_bb0290","doi-asserted-by":"crossref","first-page":"922","DOI":"10.3201\/eid2205.151908","article-title":"Exposure to bat-associated Bartonella spp. among humans and other animals, Ghana","volume":"22","author":"Mannerings","year":"2016","journal-title":"Emerg. Infect. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0295","first-page":"209","article-title":"The detection of disease clustering and a generalized regression approach","volume":"27","author":"Mantel","year":"1967","journal-title":"Cancer Res"},{"key":"10.1016\/j.meegid.2016.07.033_bb0300","doi-asserted-by":"crossref","first-page":"1717","DOI":"10.1016\/j.meegid.2012.06.009","article-title":"Global distribution and genetic diversity of Bartonella in bat flies (Hippoboscoidea, Streblidae, Nycteribiidae)","volume":"12","author":"Morse","year":"2012","journal-title":"Infect. Genet. Evol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0305","series-title":"Molecular Evolution and Phylogenetics","author":"Nei","year":"2000"},{"key":"10.1016\/j.meegid.2016.07.033_bb0310","doi-asserted-by":"crossref","first-page":"1797","DOI":"10.1128\/jcm.33.7.1797-1803.1995","article-title":"Differentiation of Bartonella-like isolates at the species level by PCR-restriction fragment length polymorphism in the citrate synthase gene","volume":"33","author":"Norman","year":"1995","journal-title":"J. Clin. Microbiol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0315","doi-asserted-by":"crossref","first-page":"351","DOI":"10.1098\/rsbl.2006.0485","article-title":"Ranging patterns and parasitism in primates","volume":"2","author":"Nunn","year":"2006","journal-title":"Biol. Lett"},{"key":"10.1016\/j.meegid.2016.07.033_bb0320","doi-asserted-by":"crossref","first-page":"662","DOI":"10.1126\/science.1229237","article-title":"The placental mammal ancestor and the post-K-Pg radiation of placentals","volume":"339","author":"O'Leary","year":"2013","journal-title":"Science"},{"key":"10.1016\/j.meegid.2016.07.033_bb0325","series-title":"Vegan: Community Ecology Package","author":"Oksanen","year":"2015"},{"key":"10.1016\/j.meegid.2016.07.033_bb0330","first-page":"51","article-title":"Bartonella spp. in a Puerto Rican bat community","author":"Olival","year":"2015","journal-title":"J. Wildl. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0335","doi-asserted-by":"crossref","first-page":"659","DOI":"10.1016\/S1286-4579(03)00097-2","article-title":"Adaptation of Borrelia burgdorferi in the vector and vertebrate host","volume":"5","author":"Pal","year":"2003","journal-title":"Microbes Infect"},{"key":"10.1016\/j.meegid.2016.07.033_bb0340","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1093\/bioinformatics\/btg412","article-title":"APE: analyses of phylogenetics and evolution in R language","volume":"20","author":"Paradis","year":"2004","journal-title":"Bioinformatics"},{"key":"10.1016\/j.meegid.2016.07.033_bb0345","doi-asserted-by":"crossref","first-page":"134","DOI":"10.1007\/s00248-010-9735-1","article-title":"Recombination within and between species of the alpha proteobacterium Bartonella infecting rodents","volume":"61","author":"Paziewska","year":"2011","journal-title":"Microb. Ecol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0350","doi-asserted-by":"crossref","first-page":"525","DOI":"10.1007\/s00248-012-0033-y","article-title":"Recombination, diversity and allele sharing of infectivity proteins between Bartonella species from rodents","volume":"64","author":"Paziewska","year":"2012","journal-title":"Microb. Ecol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0355","article-title":"Classes and methods for spatial data in R","volume":"5","author":"Pebesma","year":"2005","journal-title":"R News"},{"key":"10.1016\/j.meegid.2016.07.033_bb0360","series-title":"Bayesian Statistics","first-page":"1","article-title":"Estimating the integrated likelihood via posterior simulation using the harmonic mean identity","author":"Raftery","year":"2007"},{"key":"10.1016\/j.meegid.2016.07.033_bb0365","first-page":"339","article-title":"Molecular evidence for novel bartonella species in Trichobius major (Diptera: Streblidae) and Cimex adjunctus (Hemiptera: Cimicidae) from two southeastern bat caves, U.S.A","volume":"30","author":"Reeves","year":"2005","journal-title":"J. Vector Ecol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0370","doi-asserted-by":"crossref","first-page":"118","DOI":"10.3376\/1081-1710(2007)32[118:AOBWTF]2.0.CO;2","article-title":"Association of Bartonella with the fleas (Siphonaptera) of rodents and bats using molecular techniques","volume":"32","author":"Reeves","year":"2007","journal-title":"J. Vector Ecol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0375","first-page":"e12418","article-title":"The community ecology of pathogens: coinfection, coexistence and community composition","author":"Seabloom","year":"2015","journal-title":"Ecol. Lett"},{"key":"10.1016\/j.meegid.2016.07.033_bb0380","doi-asserted-by":"crossref","first-page":"676","DOI":"10.1126\/science.1188836","article-title":"Host phylogeny constrains cross-species emergence and establishment of rabies virus in bats","volume":"329","author":"Streicker","year":"2010","journal-title":"Science"},{"key":"10.1016\/j.meegid.2016.07.033_bb0385","doi-asserted-by":"crossref","first-page":"2725","DOI":"10.1093\/molbev\/mst197","article-title":"MEGA6: molecular evolutionary genetics analysis version 6.0","volume":"30","author":"Tamura","year":"2013","journal-title":"Mol. Biol. Evol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0390","doi-asserted-by":"crossref","first-page":"1431","DOI":"10.1073\/pnas.022477199","article-title":"Microbat paraphyly and the convergent evolution of a key innovation in Old World rhinolophoid microbats","volume":"99","author":"Teeling","year":"2002","journal-title":"Proc. Natl. Acad. Sci"},{"key":"10.1016\/j.meegid.2016.07.033_bb0395","doi-asserted-by":"crossref","first-page":"299","DOI":"10.1016\/j.cimid.2011.04.005","article-title":"Bartonella species and their ectoparasites: selective host adaptation or strain selection between the vector and the mammalian host?","volume":"34","author":"Tsai","year":"2011","journal-title":"Comp. Immunol. Microbiol. Infect. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0400","doi-asserted-by":"crossref","first-page":"960","DOI":"10.3201\/eid2006.130956","article-title":"Bats as reservoir hosts of human bacterial pathogen, Bartonella mayotimonensis","volume":"20","author":"Veikkolainen","year":"2014","journal-title":"Emerg. Infect. Dis"},{"key":"10.1016\/j.meegid.2016.07.033_bb0405","doi-asserted-by":"crossref","first-page":"183","DOI":"10.1086\/652373","article-title":"Conceptual synthesis in community ecology","volume":"85","author":"Vellend","year":"2010","journal-title":"Q. Rev. Biol"},{"key":"10.1016\/j.meegid.2016.07.033_bb0410","doi-asserted-by":"crossref","first-page":"199","DOI":"10.1038\/ismej.2008.93","article-title":"A comparison of homologous recombination rates in bacteria and archaea","volume":"3","author":"Vos","year":"2008","journal-title":"ISME J"},{"key":"10.1016\/j.meegid.2016.07.033_bb0415","series-title":"Mammal Species of the World: A Taxonomic and Geographic Reference","author":"Wilson","year":"2005"},{"key":"10.1016\/j.meegid.2016.07.033_bb0420","doi-asserted-by":"crossref","DOI":"10.1093\/gbe\/evu169","article-title":"Horizontal transfers and gene losses in the phospholipid pathway of Bartonella reveal clues about early ecological niches","author":"Zhu","year":"2014","journal-title":"Genome Biol. Evol"}],"container-title":["Infection, Genetics and Evolution"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1567134816303239?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1567134816303239?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,10,27]],"date-time":"2025-10-27T14:32:07Z","timestamp":1761575527000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1567134816303239"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016,10]]},"references-count":84,"alternative-id":["S1567134816303239"],"URL":"https:\/\/doi.org\/10.1016\/j.meegid.2016.07.033","relation":{},"ISSN":["1567-1348"],"issn-type":[{"value":"1567-1348","type":"print"}],"subject":[],"published":{"date-parts":[[2016,10]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Phylogenetic and geographic patterns of bartonella host shifts among bat species","name":"articletitle","label":"Article Title"},{"value":"Infection, Genetics and Evolution","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.meegid.2016.07.033","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"Published by Elsevier B.V.","name":"copyright","label":"Copyright"}]}}