{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,12]],"date-time":"2026-05-12T21:19:23Z","timestamp":1778620763992,"version":"3.51.4"},"reference-count":64,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2020,6,1]],"date-time":"2020-06-01T00:00:00Z","timestamp":1590969600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2020,6,1]],"date-time":"2020-06-01T00:00:00Z","timestamp":1590969600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"}],"funder":[{"DOI":"10.13039\/501100001599","name":"National Council for Forest Research and Development","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001599","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100006162","name":"Funda\u00e7\u00e3o de Amparo \u00e0 Ci\u00eancia e Tecnologia do Estado de Pernambuco","doi-asserted-by":"publisher","award":["APQ-0078-2.02\/16"],"award-info":[{"award-number":["APQ-0078-2.02\/16"]}],"id":[{"id":"10.13039\/501100006162","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100006162","name":"Funda\u00e7\u00e3o de Amparo \u00e0 Ci\u00eancia e Tecnologia do Estado de Pernambuco","doi-asserted-by":"publisher","award":["APQ-0085-2.13\/16"],"award-info":[{"award-number":["APQ-0085-2.13\/16"]}],"id":[{"id":"10.13039\/501100006162","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100006162","name":"Funda\u00e7\u00e3o de Amparo \u00e0 Ci\u00eancia e Tecnologia do Estado de Pernambuco","doi-asserted-by":"publisher","award":["APQ-1608-2.13\/15"],"award-info":[{"award-number":["APQ-1608-2.13\/15"]}],"id":[{"id":"10.13039\/501100006162","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100003593","name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","doi-asserted-by":"publisher","award":["441100\/2016-3"],"award-info":[{"award-number":["441100\/2016-3"]}],"id":[{"id":"10.13039\/501100003593","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Infection, Genetics and Evolution"],"published-print":{"date-parts":[[2020,6]]},"DOI":"10.1016\/j.meegid.2020.104180","type":"journal-article","created":{"date-parts":[[2020,1,7]],"date-time":"2020-01-07T06:12:19Z","timestamp":1578377539000},"page":"104180","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":4,"special_numbering":"C","title":["Sequencing of ZIKV genomes directly from Ae. aegypti and Cx. quinquefasciatus mosquitoes collected during the 2015\u201316 epidemics in Recife"],"prefix":"10.1016","volume":"80","author":[{"given":"Marcelo Henrique Santos","family":"Paiva","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Duschinka Ribeiro Duarte","family":"Guedes","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Larissa","family":"Krokovsky","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Lais Ceschini","family":"Machado","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Tatiana Maria Teodoro","family":"Rezende","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mariana Carolina de Morais","family":"Sobral","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Const\u00e2ncia Fl\u00e1via Junqueira","family":"Ayres","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gabriel Luz","family":"Wallau","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/j.meegid.2020.104180_bb0005","article-title":"The microcephaly epidemic and Zika virus: building knowledge in epidemiology","volume":"34","author":"Albuquerque","year":"2018","journal-title":"Cadernos de saude publica"},{"key":"10.1016\/j.meegid.2020.104180_bb0010","doi-asserted-by":"crossref","first-page":"539","DOI":"10.1080\/10635150600755453","article-title":"Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative","volume":"55","author":"Anisimova","year":"2006","journal-title":"Syst. Biol."},{"key":"10.1016\/j.meegid.2020.104180_bb0015","doi-asserted-by":"crossref","DOI":"10.1186\/s13071-019-3461-4","article-title":"Zika virus detection, isolation and genome sequencing through Culicidae sampling during the epidemic in Vitoria, Espirito Santo, Brazil","volume":"12","author":"Ayres","year":"2019","journal-title":"Parasit. Vectors"},{"key":"10.1016\/j.meegid.2020.104180_bb0020","doi-asserted-by":"crossref","first-page":"242","DOI":"10.1080\/22221751.2018.1561157","article-title":"Naturally infected Aedes aegypti collected during a Zika virus outbreak have viral titres consistent with transmission","volume":"8","author":"Azar","year":"2019","journal-title":"Emerg. Microb. Infect."},{"key":"10.1016\/j.meegid.2020.104180_bb0025","series-title":"Monitoring Temporal Fluctuations of Culex quinquefasciatus Using Oviposition Traps Containing Attractant And Larvicide In An Urban Environment In Recife","first-page":"451","volume":"106","author":"Barbosa","year":"2011"},{"key":"10.1016\/j.meegid.2020.104180_bb0030","doi-asserted-by":"crossref","first-page":"2114","DOI":"10.1093\/bioinformatics\/btu170","article-title":"Trimmomatic: a flexible trimmer for Illumina sequence data","volume":"30","author":"Bolger","year":"2014","journal-title":"Bioinformatics"},{"key":"10.1016\/j.meegid.2020.104180_bb0035","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pntd.0007433","article-title":"Vector competence of Aedes aegypti for different strains of Zika virus in Argentina","volume":"13","author":"Bonica","year":"2019","journal-title":"PLoS Negl. Trop. Dis."},{"key":"10.1016\/j.meegid.2020.104180_bb0040","series-title":"Procedimentos preliminares a serem adotados para a vigil\u00e2ncia dos casos de microcefalia no Brasil, in: ESPIN, N.I.n.-C.m.E.d.S.P.d.I.N.-. (Ed.)","author":"Brasil","year":"2015"},{"key":"10.1016\/j.meegid.2020.104180_bb0045","doi-asserted-by":"crossref","first-page":"679","DOI":"10.20344\/amp.7341","article-title":"Zika virus: a new chapter in the history of medicine","volume":"28","author":"Brito","year":"2015","journal-title":"Acta Medica Port."},{"key":"10.1016\/j.meegid.2020.104180_bb0050","doi-asserted-by":"crossref","first-page":"2665","DOI":"10.1534\/genetics.105.048975","article-title":"A simple and robust statistical test for detecting the presence of recombination","volume":"172","author":"Bruen","year":"2006","journal-title":"Genetics"},{"key":"10.1016\/j.meegid.2020.104180_bb0055","doi-asserted-by":"crossref","first-page":"1885","DOI":"10.3201\/eid2110.150847","article-title":"Zika Virus Outbreak, Bahia, Brazil","volume":"21","author":"Campos","year":"2015","journal-title":"Emerg. Infect. Dis."},{"key":"10.1016\/j.meegid.2020.104180_bb0060","doi-asserted-by":"crossref","DOI":"10.1155\/2018\/6941735","article-title":"Revisiting key entry routes of human epidemic Arboviruses into the mainland Americas through large-scale Phylogenomics","volume":"2018","author":"Campos","year":"2018","journal-title":"Int. J. Genomics"},{"key":"10.1016\/j.meegid.2020.104180_bb0065","doi-asserted-by":"crossref","first-page":"1085","DOI":"10.3201\/eid2006.140138","article-title":"Zika virus, French polynesia, south pacific, 2013","volume":"20","author":"Cao-Lormeau","year":"2014","journal-title":"Emerg. Infect. Dis."},{"key":"10.1016\/j.meegid.2020.104180_bb0070","doi-asserted-by":"crossref","first-page":"323","DOI":"10.1007\/s00705-014-2217-x","article-title":"Development of a multiplex real-time RT-PCR assay for simultaneous detection of dengue and chikungunya viruses","volume":"160","author":"Cecilia","year":"2015","journal-title":"Arch. Virol."},{"key":"10.1016\/j.meegid.2020.104180_bb0075","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pntd.0004543","article-title":"Differential susceptibilities of Aedes aegypti and Aedes albopictus from the Americas to Zika virus","volume":"10","author":"Chouin-Carneiro","year":"2016","journal-title":"PLoS Negl. Trop. Dis."},{"key":"10.1016\/j.meegid.2020.104180_bb0080","doi-asserted-by":"crossref","first-page":"71","DOI":"10.1186\/1471-2148-13-71","article-title":"The evolution of virulence of West Nile virus in a mosquito vector: implications for arbovirus adaptation and evolution","volume":"13","author":"Ciota","year":"2013","journal-title":"BMC Evol. Biol."},{"key":"10.1016\/j.meegid.2020.104180_bb0085","doi-asserted-by":"crossref","first-page":"880","DOI":"10.3201\/eid2305.162041","article-title":"Vertical transmission of Zika virus by Aedes aegypti and Ae. albopictus mosquitoes","volume":"23","author":"Ciota","year":"2017","journal-title":"Emerg. Infect. Dis."},{"key":"10.1016\/j.meegid.2020.104180_bb0090","first-page":"85","article-title":"Overviews of pathogen emergence: which pathogens emerge, when and why?","volume":"315","author":"Cleaveland","year":"2007","journal-title":"Curr. Top. Microbiol. Immunol."},{"key":"10.1016\/j.meegid.2020.104180_bb0095","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pntd.0006594","article-title":"Evidence of vertical transmission of Zika virus in field-collected eggs of Aedes aegypti in the Brazilian Amazon","volume":"12","author":"da Costa","year":"2018","journal-title":"PLoS Negl. Trop. Dis."},{"key":"10.1016\/j.meegid.2020.104180_bb0100","first-page":"328","article-title":"Association between microcephaly, Zika virus infection, and other risk factors in Brazil: final report of a case-control study. The lancet","volume":"18","author":"de Araujo","year":"2018","journal-title":"Infect. Dis. Ther."},{"key":"10.1016\/j.meegid.2020.104180_bb0105","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0109442","article-title":"Zika virus emergence in mosquitoes in southeastern Senegal, 2011","volume":"9","author":"Diallo","year":"2014","journal-title":"PLoS One"},{"key":"10.1016\/j.meegid.2020.104180_bb0110","doi-asserted-by":"crossref","first-page":"509","DOI":"10.1016\/0035-9203(52)90042-4","article-title":"Zika virus. I. Isolations and serological specificity","volume":"46","author":"Dick","year":"1952","journal-title":"Trans. R. Soc. Trop. Med. Hyg."},{"key":"10.1016\/j.meegid.2020.104180_bb0115","doi-asserted-by":"crossref","first-page":"2536","DOI":"10.1056\/NEJMoa0805715","article-title":"Zika virus outbreak on Yap Island, Federated States of Micronesia","volume":"360","author":"Duffy","year":"2009","journal-title":"New Engl. J. Med."},{"key":"10.1016\/j.meegid.2020.104180_bb0120","article-title":"Zika virus in salivary glands of five different species of wild-caught mosquitoes from Mexico","volume":"8","author":"Elizondo-Quiroga","year":"2018","journal-title":"Sci. Rep."},{"key":"10.1016\/j.meegid.2020.104180_bb0125","doi-asserted-by":"crossref","first-page":"345","DOI":"10.1126\/science.aaf5036","article-title":"Zika virus in the Americas: early epidemiological and genetic findings","volume":"352","author":"Faria","year":"2016","journal-title":"Science"},{"key":"10.1016\/j.meegid.2020.104180_bb0130","doi-asserted-by":"crossref","first-page":"406","DOI":"10.1038\/nature22401","article-title":"Establishment and cryptic transmission of Zika virus in Brazil and the Americas","volume":"546","author":"Faria","year":"2017","journal-title":"Nature"},{"key":"10.1016\/j.meegid.2020.104180_bb0135","doi-asserted-by":"crossref","first-page":"655","DOI":"10.1590\/0074-02760160332","article-title":"First detection of natural infection of Aedes aegypti with Zika virus in Brazil and throughout South America","volume":"111","author":"Ferreira-de-Brito","year":"2016","journal-title":"Mem. Inst. Oswaldo Cruz"},{"key":"10.1016\/j.meegid.2020.104180_bb0140","doi-asserted-by":"crossref","first-page":"142","DOI":"10.1016\/j.meegid.2016.03.030","article-title":"Zika virus complete genome from Salvador, Bahia","volume":"41","author":"Giovanetti","year":"2016","journal-title":"Braz. Infect. Genetics Evol."},{"key":"10.1016\/j.meegid.2020.104180_bb0145","doi-asserted-by":"crossref","first-page":"401","DOI":"10.1038\/nature22400","article-title":"Genomic epidemiology reveals multiple introductions of Zika virus into the United States","volume":"546","author":"Grubaugh","year":"2017","journal-title":"Nature"},{"key":"10.1016\/j.meegid.2020.104180_bb0150","doi-asserted-by":"crossref","first-page":"e69","DOI":"10.1038\/emi.2017.59","article-title":"Zika virus replication in the mosquito Culex quinquefasciatus in Brazil","volume":"6","author":"Guedes","year":"2017","journal-title":"Emerg. Microb. Infect."},{"key":"10.1016\/j.meegid.2020.104180_bb0155","doi-asserted-by":"crossref","unstructured":"Guerbois, M., Fernandez-Salas, I., Azar, S.R., Danis-Lozano, R., Alpuche-Aranda, C.M., Leal, G., Garcia-Malo, I.R., Diaz-Gonzalez, E.E., Casas-Martinez, M., Rossi, S.L., Del Rio-Galvan, S.L., Sanchez-Casas, R.M., Roundy, C.M., Wood, T.G., Widen, S.G., Vasilakis, N., Weaver, S.C., 2016. Outbreak of Zika virus infection, Chiapas state, Mexico, 2015, and first confirmed transmission by Aedes aegypti mosquitoes in the Americas. J. Infect. Dis. 214, 1349\u20131356.","DOI":"10.1093\/infdis\/jiw302"},{"key":"10.1016\/j.meegid.2020.104180_bb0160","doi-asserted-by":"crossref","first-page":"307","DOI":"10.1093\/sysbio\/syq010","article-title":"New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0","volume":"59","author":"Guindon","year":"2010","journal-title":"Syst. Biol."},{"key":"10.1016\/j.meegid.2020.104180_bb0165","doi-asserted-by":"crossref","first-page":"e102","DOI":"10.1038\/emi.2016.102","article-title":"Culex pipiens quinquefasciatus: a potential vector to transmit Zika virus","volume":"5","author":"Guo","year":"2016","journal-title":"Emerg. Microb. Infect."},{"key":"10.1016\/j.meegid.2020.104180_bb0170","doi-asserted-by":"crossref","first-page":"719","DOI":"10.1016\/S0140-6736(16)00320-2","article-title":"Zika virus and microcephaly: why is this situation a PHEIC?","volume":"387","author":"Heymann","year":"2016","journal-title":"Lancet"},{"key":"10.1016\/j.meegid.2020.104180_bb0175","series-title":"The Evolution and Emergence of RNA Viruses","author":"Holmes","year":"2009"},{"issue":"4","key":"10.1016\/j.meegid.2020.104180_bb0180","doi-asserted-by":"crossref","first-page":"1160","DOI":"10.1093\/bib\/bbx108","article-title":"MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization","volume":"20","author":"Katoh","year":"2017","journal-title":"Brief. Bioinform."},{"key":"10.1016\/j.meegid.2020.104180_bb0185","doi-asserted-by":"crossref","first-page":"160","DOI":"10.1186\/1471-2148-9-160","article-title":"Genetic specificity and potential for local adaptation between dengue viruses and mosquito vectors","volume":"9","author":"Lambrechts","year":"2009","journal-title":"BMC Evol. Biol."},{"key":"10.1016\/j.meegid.2020.104180_bb0190","doi-asserted-by":"crossref","first-page":"357","DOI":"10.1038\/nmeth.1923","article-title":"Fast gapped-read alignment with bowtie 2","volume":"9","author":"Langmead","year":"2012","journal-title":"Nat. Methods"},{"key":"10.1016\/j.meegid.2020.104180_bb0195","doi-asserted-by":"crossref","first-page":"3276","DOI":"10.1093\/bioinformatics\/btu531","article-title":"AliView: a fast and lightweight alignment viewer and editor for large datasets","volume":"30","author":"Larsson","year":"2014","journal-title":"Bioinformatics"},{"key":"10.1016\/j.meegid.2020.104180_bb0200","doi-asserted-by":"crossref","first-page":"2422","DOI":"10.1093\/molbev\/msx149","article-title":"SMS: Smart model selection in PhyML","volume":"34","author":"Lefort","year":"2017","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.meegid.2020.104180_bb0205","doi-asserted-by":"crossref","first-page":"482","DOI":"10.1038\/nature22365","article-title":"Evolutionary enhancement of Zika virus infectivity in Aedes aegypti mosquitoes","volume":"545","author":"Liu","year":"2017","journal-title":"Nature"},{"key":"10.1016\/j.meegid.2020.104180_bb0210","doi-asserted-by":"crossref","first-page":"1407","DOI":"10.1001\/jamaneurol.2016.3720","article-title":"Congenital Zika virus infection: beyond neonatal microcephaly","volume":"73","author":"Melo","year":"2016","journal-title":"JAMA Neurol."},{"key":"10.1016\/j.meegid.2020.104180_bb0215","doi-asserted-by":"crossref","first-page":"1302","DOI":"10.1093\/cid\/cix166","article-title":"Lessons learned at the epicenter of Brazil\u2019s congenital Zika epidemic: evidence from 87 confirmed cases","volume":"64","author":"Meneses","year":"2017","journal-title":"Clin. Infect. Dis."},{"key":"10.1016\/j.meegid.2020.104180_bb0220","doi-asserted-by":"crossref","first-page":"411","DOI":"10.1038\/nature22402","article-title":"Zika virus evolution and spread in the Americas","volume":"546","author":"Metsky","year":"2017","journal-title":"Nature"},{"key":"10.1016\/j.meegid.2020.104180_bb0225","doi-asserted-by":"crossref","first-page":"597","DOI":"10.1590\/1678-4685-gmb-2016-0312","article-title":"Sensitivity of RT-PCR method in samples shown to be positive for Zika virus by RT-qPCR in vector competence studies","volume":"40","author":"Paiva","year":"2017","journal-title":"Genet. Mol. Biol."},{"key":"10.1016\/j.meegid.2020.104180_bb0230","doi-asserted-by":"crossref","first-page":"56","DOI":"10.1590\/0074-02760170329","article-title":"First evidence of Zika virus venereal transmission in Aedes aegypti mosquitoes","volume":"113","author":"Pereira-Silva","year":"2018","journal-title":"Mem. Inst. Oswaldo Cruz"},{"key":"10.1016\/j.meegid.2020.104180_bb0235","doi-asserted-by":"crossref","DOI":"10.3390\/pathogens8010030","article-title":"Molecular epidemiology and genetic diversity of Zika virus from field-caught mosquitoes in various regions of Thailand","volume":"8","author":"Phumee","year":"2019","journal-title":"Pathogens"},{"key":"10.1016\/j.meegid.2020.104180_bb0240","doi-asserted-by":"crossref","first-page":"1261","DOI":"10.1038\/nprot.2017.066","article-title":"Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples","volume":"12","author":"Quick","year":"2017","journal-title":"Nat. Protoc."},{"key":"10.1016\/j.meegid.2020.104180_bb0245","doi-asserted-by":"crossref","first-page":"901","DOI":"10.1093\/sysbio\/syy032","article-title":"Posterior summarization in Bayesian phylogenetics using tracer 1.7","volume":"67","author":"Rambaut","year":"2018","journal-title":"Syst. Biol."},{"key":"10.1016\/j.meegid.2020.104180_bb0250","doi-asserted-by":"crossref","DOI":"10.1186\/s13071-018-2901-x","article-title":"Searching for the proverbial needle in a haystack: advances in mosquito-borne arbovirus surveillance","volume":"11","author":"Ramirez","year":"2018","journal-title":"Parasit. Vectors"},{"key":"10.1016\/j.meegid.2020.104180_bb0255","doi-asserted-by":"crossref","first-page":"488","DOI":"10.1016\/S0035-9203(00)90061-0","article-title":"Efficacy of Bacillus sphaericus in control of the filariasis vector Culex quinquefasciatus in an urban area of Olinda, Brazil","volume":"94","author":"Regis","year":"2000","journal-title":"Trans. R. Soc. Trop. Med. Hyg."},{"key":"10.1016\/j.meegid.2020.104180_bb0260","doi-asserted-by":"crossref","first-page":"24","DOI":"10.1038\/nbt.1754","article-title":"Integrative genomics viewer","volume":"29","author":"Robinson","year":"2011","journal-title":"Nat. Biotechnol."},{"key":"10.1016\/j.meegid.2020.104180_bb0265","doi-asserted-by":"crossref","DOI":"10.1038\/s41598-018-34147-7","article-title":"Whole genome sequencing, variant analysis, phylogenetics, and deep sequencing of Zika virus strains","volume":"8","author":"Shrivastava","year":"2018","journal-title":"Sci. Rep."},{"key":"10.1016\/j.meegid.2020.104180_bb0270","doi-asserted-by":"crossref","first-page":"768","DOI":"10.3389\/fmicb.2018.00768","article-title":"Culex quinquefasciatus (Diptera: Culicidae) From Florida Transmitted Zika Virus","volume":"9","author":"Smartt","year":"2018","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.meegid.2020.104180_bb0275","series-title":"Bayesian Phylogenetic and Phylodynamic Data Integration using BEAST 1.10. Virus evolution 4","author":"Suchard","year":"2018"},{"key":"10.1016\/j.meegid.2020.104180_bb0280","doi-asserted-by":"crossref","first-page":"1169","DOI":"10.4269\/ajtmh.16-0448","article-title":"Vertical transmission of Zika virus in Aedes aegypti mosquitoes","volume":"95","author":"Thangamani","year":"2016","journal-title":"Am. J. Trop. Med. Hygiene"},{"key":"10.1016\/j.meegid.2020.104180_bb0285","doi-asserted-by":"crossref","first-page":"178","DOI":"10.1093\/bib\/bbs017","article-title":"Integrative genomics viewer (IGV): high-performance genomics data visualization and exploration","volume":"14","author":"Thorvaldsdottir","year":"2013","journal-title":"Brief. Bioinform."},{"key":"10.1016\/j.meegid.2020.104180_bb0290","doi-asserted-by":"crossref","first-page":"665","DOI":"10.1007\/s00705-015-2695-5","article-title":"A report on the outbreak of Zika virus on Easter Island, South Pacific, 2014","volume":"161","author":"Tognarelli","year":"2016","journal-title":"Arch. Virol."},{"key":"10.1016\/j.meegid.2020.104180_bb0295","doi-asserted-by":"crossref","first-page":"e201","DOI":"10.1371\/journal.ppat.0030201","article-title":"A single mutation in chikungunya virus affects vector specificity and epidemic potential","volume":"3","author":"Tsetsarkin","year":"2007","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.meegid.2020.104180_bb0300","doi-asserted-by":"crossref","first-page":"860","DOI":"10.1128\/JCM.00279-16","article-title":"Zika virus: diagnostics for an emerging pandemic threat","volume":"54","author":"Waggoner","year":"2016","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.meegid.2020.104180_bb0305","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pntd.0005101","article-title":"Vector competence of American mosquitoes for three strains of Zika virus","volume":"10","author":"Weger-Lucarelli","year":"2016","journal-title":"PLoS Negl. Trop. Dis."},{"key":"10.1016\/j.meegid.2020.104180_bb0310","unstructured":"WHO, 2016. WHO director- general summarizes the outcome of the emergency committee regarding clusters of microcephaly and Guillain-Barr\u00e9 syndrome, in: Organization, W. H. (Ed.), Geneve."},{"key":"10.1016\/j.meegid.2020.104180_bb0315","doi-asserted-by":"crossref","first-page":"933","DOI":"10.1126\/science.aam7120","article-title":"A single mutation in the prM protein of Zika virus contributes to fetal microcephaly","volume":"358","author":"Yuan","year":"2017","journal-title":"Science"},{"key":"10.1016\/j.meegid.2020.104180_bb0320","doi-asserted-by":"crossref","first-page":"341","DOI":"10.1093\/jme\/tjy231","article-title":"Florida Aedes aegypti (Diptera: Culicidae) and Aedes albopictus vector competency for Zika virus","volume":"56","author":"Zimler","year":"2019","journal-title":"J. Med. Entomol."}],"container-title":["Infection, Genetics and Evolution"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1567134820300125?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1567134820300125?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,5,12]],"date-time":"2026-05-12T20:49:31Z","timestamp":1778618971000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1567134820300125"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,6]]},"references-count":64,"alternative-id":["S1567134820300125"],"URL":"https:\/\/doi.org\/10.1016\/j.meegid.2020.104180","relation":{},"ISSN":["1567-1348"],"issn-type":[{"value":"1567-1348","type":"print"}],"subject":[],"published":{"date-parts":[[2020,6]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Sequencing of ZIKV genomes directly from Ae. aegypti and Cx. quinquefasciatus mosquitoes collected during the 2015\u201316 epidemics in Recife","name":"articletitle","label":"Article Title"},{"value":"Infection, Genetics and Evolution","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.meegid.2020.104180","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2020 Elsevier B.V. All rights reserved.","name":"copyright","label":"Copyright"}],"article-number":"104180"}}