{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,11,3]],"date-time":"2026-11-03T18:12:17Z","timestamp":1793729537669,"version":"4.6.1"},"reference-count":74,"publisher":"Elsevier BV","issue":"10","license":[{"start":{"date-parts":[[2024,10,1]],"date-time":"2024-10-01T00:00:00Z","timestamp":1727740800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2024,10,1]],"date-time":"2024-10-01T00:00:00Z","timestamp":1727740800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2024,8,21]],"date-time":"2024-08-21T00:00:00Z","timestamp":1724198400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100000011","name":"HHMI","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000011","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["1R35GM118036"],"award-info":[{"award-number":["1R35GM118036"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004008","name":"National Institute of Health","doi-asserted-by":"publisher","award":["5T32GM007754-40"],"award-info":[{"award-number":["5T32GM007754-40"]}],"id":[{"id":"10.13039\/501100004008","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004008","name":"National Institute of Health","doi-asserted-by":"publisher","award":["R01GM135706"],"award-info":[{"award-number":["R01GM135706"]}],"id":[{"id":"10.13039\/501100004008","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004008","name":"National Institute of Health","doi-asserted-by":"publisher","award":["1R35GM118036"],"award-info":[{"award-number":["1R35GM118036"]}],"id":[{"id":"10.13039\/501100004008","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["cell.com","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Molecular Plant"],"published-print":{"date-parts":[[2024,10]]},"DOI":"10.1016\/j.molp.2024.08.008","type":"journal-article","created":{"date-parts":[[2024,8,23]],"date-time":"2024-08-23T01:19:24Z","timestamp":1724375964000},"page":"1558-1572","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":60,"title":["Next-generation mapping of the salicylic acid signaling hub and transcriptional cascade"],"prefix":"10.1016","volume":"17","author":[{"given":"Jordan","family":"Powers","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xing","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andres V.","family":"Reyes","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Raul","family":"Zavaliev","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Roni","family":"Ochakovski","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shou-Ling","family":"Xu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xinnian","family":"Dong","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.molp.2024.08.008_bib1","doi-asserted-by":"crossref","first-page":"1470","DOI":"10.1128\/MCB.19.2.1470","article-title":"The SWI\/SNF complex creates loop domains in DNA and polynucleosome arrays and can disrupt DNA-histone contacts within these domains","volume":"19","author":"Bazett-Jones","year":"1999","journal-title":"Mol. Cell Biol."},{"key":"10.1016\/j.molp.2024.08.008_bib2","doi-asserted-by":"crossref","first-page":"1583","DOI":"10.2307\/3869945","article-title":"Characterization of an Arabidopsis Mutant That Is Nonresponsive to Inducers of Systemic Acquired Resistance","volume":"6","author":"Cao","year":"1994","journal-title":"Plant Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib3","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1104\/pp.19.00124","article-title":"NPR1 promotes its own and target gene expression in plant defense by recruiting CDK8","volume":"181","author":"Chen","year":"2019","journal-title":"Plant Physiol."},{"key":"10.1016\/j.molp.2024.08.008_bib4","doi-asserted-by":"crossref","first-page":"735","DOI":"10.1046\/j.1365-313x.1998.00343.x","article-title":"Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana","volume":"16","author":"Clough","year":"1998","journal-title":"Plant J."},{"key":"10.1016\/j.molp.2024.08.008_bib5","doi-asserted-by":"crossref","DOI":"10.1016\/j.xplc.2023.100676","article-title":"Cell specialization and coordination in Arabidopsis leaves upon pathogenic attack revealed by scRNA-seq","volume":"4","author":"Delannoy","year":"2023","journal-title":"Plant Commun."},{"key":"10.1016\/j.molp.2024.08.008_bib6","doi-asserted-by":"crossref","first-page":"279","DOI":"10.1105\/tpc.12.2.279","article-title":"The Arabidopsis NPR1\/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors","volume":"12","author":"Despres","year":"2000","journal-title":"Plant Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib7","doi-asserted-by":"crossref","first-page":"1454","DOI":"10.1016\/j.cell.2018.03.044","article-title":"Opposite roles of salicylic acid receptors NPR1 and NPR3\/NPR4 in transcriptional regulation of plant immunity","volume":"173","author":"Ding","year":"2018","journal-title":"Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib8","doi-asserted-by":"crossref","first-page":"15","DOI":"10.1093\/bioinformatics\/bts635","article-title":"STAR: ultrafast universal RNA-seq aligner","volume":"29","author":"Dobin","year":"2013","journal-title":"Bioinformatics"},{"key":"10.1016\/j.molp.2024.08.008_bib9","doi-asserted-by":"crossref","DOI":"10.1371\/journal.ppat.1003659","article-title":"Type I J-domain NbMIP1 proteins are required for both Tobacco mosaic virus infection and plant innate immunity","volume":"9","author":"Du","year":"2013","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.molp.2024.08.008_bib10","doi-asserted-by":"crossref","first-page":"228","DOI":"10.1038\/nature11162","article-title":"NPR3 and NPR4 are receptors for the immune signal salicylic acid in plants","volume":"486","author":"Fu","year":"2012","journal-title":"Nature"},{"key":"10.1016\/j.molp.2024.08.008_bib11","doi-asserted-by":"crossref","first-page":"576","DOI":"10.1016\/j.molcel.2010.05.004","article-title":"Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities","volume":"38","author":"Heinz","year":"2010","journal-title":"Mol. Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib12","doi-asserted-by":"crossref","first-page":"612","DOI":"10.1105\/tpc.19.00658","article-title":"Salicylic Acid Suppresses Apical Hook Formation via NPR1-Mediated Repression of EIN3 and EIL1 in Arabidopsis","volume":"32","author":"Huang","year":"2020","journal-title":"Plant Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib13","doi-asserted-by":"crossref","first-page":"424","DOI":"10.1038\/s41586-021-03572-6","article-title":"A phase-separated nuclear GBPL circuit controls immunity in plants","volume":"594","author":"Huang","year":"2021","journal-title":"Nature"},{"key":"10.1016\/j.molp.2024.08.008_bib14","first-page":"11712","article-title":"Salicylic acid-induced transcriptional reprogramming by the HAC-NPR1-TGA histone acetyltransferase complex in Arabidopsis","volume":"46","author":"Jin","year":"2018","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.molp.2024.08.008_bib15","doi-asserted-by":"crossref","first-page":"430","DOI":"10.1038\/nature09380","article-title":"Mediator and cohesin connect gene expression and chromatin architecture","volume":"467","author":"Kagey","year":"2010","journal-title":"Nature"},{"key":"10.1016\/j.molp.2024.08.008_bib16","doi-asserted-by":"crossref","first-page":"295","DOI":"10.1094\/MPMI.2003.16.4.295","article-title":"Members of the Arabidopsis WRKY group III transcription factors are part of different plant defense signaling pathways","volume":"16","author":"Kalde","year":"2003","journal-title":"Mol. Plant Microbe Interact."},{"key":"10.1016\/j.molp.2024.08.008_bib17","doi-asserted-by":"crossref","first-page":"339","DOI":"10.1038\/s41586-022-04902-y","article-title":"Increasing the resilience of plant immunity to a warming climate","volume":"607","author":"Kim","year":"2022","journal-title":"Nature"},{"key":"10.1016\/j.molp.2024.08.008_bib18","doi-asserted-by":"crossref","first-page":"975","DOI":"10.1093\/plcell\/koad013","article-title":"Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics","volume":"35","author":"Kim","year":"2023","journal-title":"Plant Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib19","doi-asserted-by":"crossref","first-page":"2339","DOI":"10.1105\/tpc.12.12.2339","article-title":"Nuclear localization of NPR1 is required for activation of PR gene expression","volume":"12","author":"Kinkema","year":"2000","journal-title":"Plant Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib20","doi-asserted-by":"crossref","DOI":"10.1002\/cpz1.266","article-title":"greenCUT&RUN: efficient genomic profiling of GFP-tagged transcription factors and chromatin regulators","volume":"1","author":"Koidl","year":"2021","journal-title":"Curr. Protoc."},{"key":"10.1016\/j.molp.2024.08.008_bib21","doi-asserted-by":"crossref","first-page":"513","DOI":"10.1038\/nmeth.4256","article-title":"MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry-based proteomics","volume":"14","author":"Kong","year":"2017","journal-title":"Nat. Methods"},{"key":"10.1016\/j.molp.2024.08.008_bib22","doi-asserted-by":"crossref","first-page":"561","DOI":"10.1038\/s41586-022-04699-w","article-title":"Structural basis of NPR1 in activating plant immunity","volume":"605","author":"Kumar","year":"2022","journal-title":"Nature"},{"key":"10.1016\/j.molp.2024.08.008_bib23","doi-asserted-by":"crossref","first-page":"357","DOI":"10.1038\/nmeth.1923","article-title":"Fast gapped-read alignment with Bowtie 2","volume":"9","author":"Langmead","year":"2012","journal-title":"Nat. Methods"},{"key":"10.1016\/j.molp.2024.08.008_bib24","doi-asserted-by":"crossref","first-page":"687","DOI":"10.1038\/ng.3555","article-title":"Concerted genomic targeting of H3K27 demethylase REF6 and chromatin-remodeling ATPase BRM in Arabidopsis","volume":"48","author":"Li","year":"2016","journal-title":"Nat. Genet."},{"key":"10.1016\/j.molp.2024.08.008_bib25","doi-asserted-by":"crossref","first-page":"2078","DOI":"10.1093\/bioinformatics\/btp352","article-title":"The Sequence Alignment\/Map format and SAMtools","volume":"25","author":"Li","year":"2009","journal-title":"Bioinformatics"},{"key":"10.1016\/j.molp.2024.08.008_bib26","article-title":"WRKY70 and its homolog WRKY54 negatively modulate the cell wall-associated defenses to necrotrophic pathogens in Arabidopsis","volume":"12","author":"Li","year":"2017","journal-title":"PLoS One"},{"key":"10.1016\/j.molp.2024.08.008_bib27","doi-asserted-by":"crossref","first-page":"1153","DOI":"10.3389\/fpls.2018.01153","article-title":"TCP Transcription Factors Interact With NPR1 and Contribute Redundantly to Systemic Acquired Resistance","volume":"9","author":"Li","year":"2018","journal-title":"Front. Plant Sci."},{"key":"10.1016\/j.molp.2024.08.008_bib28","doi-asserted-by":"crossref","DOI":"10.3791\/53364-v","article-title":"Bacterial Leaf Infiltration Assay for Fine Characterization of Plant Defense Responses using the Arabidopsis thaliana-Pseudomonas syringae Pathosystem","author":"Liu","year":"2015","journal-title":"J. Vis. Exp."},{"key":"10.1016\/j.molp.2024.08.008_bib29","doi-asserted-by":"crossref","first-page":"550","DOI":"10.1186\/s13059-014-0550-8","article-title":"Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2","volume":"15","author":"Love","year":"2014","journal-title":"Genome Biol."},{"key":"10.1016\/j.molp.2024.08.008_bib30","doi-asserted-by":"crossref","DOI":"10.7554\/eLife.47864","article-title":"Proximity labeling of protein complexes and cell-type-specific organellar proteomes in Arabidopsis enabled by TurboID","volume":"8","author":"Mair","year":"2019","journal-title":"Elife"},{"key":"10.1016\/j.molp.2024.08.008_bib31","doi-asserted-by":"crossref","first-page":"1002","DOI":"10.1126\/science.250.4983.1002","article-title":"Salicylic Acid: a likely endogenous signal in the resistance response of tobacco to viral infection","volume":"250","author":"Malamy","year":"1990","journal-title":"Science"},{"key":"10.1016\/j.molp.2024.08.008_bib32","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1038\/82521","article-title":"The transcriptome of Arabidopsis thaliana during systemic acquired resistance","volume":"26","author":"Maleck","year":"2000","journal-title":"Nat. Genet."},{"key":"10.1016\/j.molp.2024.08.008_bib33","doi-asserted-by":"crossref","DOI":"10.1080\/19491034.2023.2205758","article-title":"Transcription factor condensates and signaling driven transcription","volume":"14","author":"Mann","year":"2023","journal-title":"Nucleus"},{"key":"10.1016\/j.molp.2024.08.008_bib34","doi-asserted-by":"crossref","first-page":"10","DOI":"10.14806\/ej.17.1.200","article-title":"Cutadapt removes adapter sequences from high-throughput sequencing reads","volume":"17","author":"Martin","year":"2011","journal-title":"EMBnet. J."},{"key":"10.1016\/j.molp.2024.08.008_bib35","doi-asserted-by":"crossref","first-page":"562","DOI":"10.1016\/j.molcel.2019.05.025","article-title":"Pioneer factor-nucleosome binding events during differentiation are motif encoded","volume":"75","author":"Meers","year":"2019","journal-title":"Mol. Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib36","doi-asserted-by":"crossref","DOI":"10.7554\/eLife.46314","article-title":"Improved CUT&RUN chromatin profiling tools","volume":"8","author":"Meers","year":"2019","journal-title":"Elife"},{"key":"10.1016\/j.molp.2024.08.008_bib37","doi-asserted-by":"crossref","first-page":"1004","DOI":"10.1126\/science.250.4983.1004","article-title":"Increase in salicylic Acid at the onset of systemic acquired resistance in cucumber","volume":"250","author":"Metraux","year":"1990","journal-title":"Science"},{"key":"10.1016\/j.molp.2024.08.008_bib38","doi-asserted-by":"crossref","first-page":"1551","DOI":"10.1038\/nprot.2013.092","article-title":"Large-scale gene function analysis with the PANTHER classification system","volume":"8","author":"Mi","year":"2013","journal-title":"Nat. Protoc."},{"key":"10.1016\/j.molp.2024.08.008_bib39","doi-asserted-by":"crossref","DOI":"10.1038\/nmeth.f.376","article-title":"QuantSeq 3\u2032 mRNA sequencing for RNA quantification","volume":"11","author":"Moll","year":"2014","journal-title":"Nat. Methods"},{"key":"10.1016\/j.molp.2024.08.008_bib40","doi-asserted-by":"crossref","DOI":"10.15252\/embj.2023113798","article-title":"Cotranscriptional demethylation induces global loss of H3K4me2 from active genes in Arabidopsis","volume":"42","author":"Mori","year":"2023","journal-title":"EMBO J."},{"key":"10.1016\/j.molp.2024.08.008_bib41","doi-asserted-by":"crossref","first-page":"e49","DOI":"10.1093\/nar\/gkab038","article-title":"Integrating quantitative proteomics with accurate genome profiling of transcription factors by greenCUT&RUN","volume":"49","author":"Nizamuddin","year":"2021","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.molp.2024.08.008_bib42","article-title":"Time-resolved single-cell and spatial gene regulatory atlas of plants under pathogen attack","author":"Nobori","year":"2023","journal-title":"bioRxiv"},{"key":"10.1016\/j.molp.2024.08.008_bib43","doi-asserted-by":"crossref","DOI":"10.1016\/j.celrep.2021.110125","article-title":"Suppression of MYC transcription activators by the immune cofactor NPR1 fine-tunes plant immune responses","volume":"37","author":"Nomoto","year":"2021","journal-title":"Cell Rep."},{"key":"10.1016\/j.molp.2024.08.008_bib44","doi-asserted-by":"crossref","first-page":"1280","DOI":"10.1016\/j.cell.2016.04.038","article-title":"Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape","volume":"165","author":"O'Malley","year":"2016","journal-title":"Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib45","doi-asserted-by":"crossref","first-page":"811","DOI":"10.1038\/s41477-018-0254-2","article-title":"NPR1 mediates a novel regulatory pathway in cold acclimation by interacting with HSFA1 factors","volume":"4","author":"Olate","year":"2018","journal-title":"Nat. Plants"},{"key":"10.1016\/j.molp.2024.08.008_bib46","doi-asserted-by":"crossref","first-page":"D543","DOI":"10.1093\/nar\/gkab1038","article-title":"The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences","volume":"50","author":"Perez-Riverol","year":"2022","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.molp.2024.08.008_bib47","doi-asserted-by":"crossref","first-page":"W187","DOI":"10.1093\/nar\/gku365","article-title":"deepTools: a flexible platform for exploring deep-sequencing data","volume":"42","author":"Ramirez","year":"2014","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.molp.2024.08.008_bib48","doi-asserted-by":"crossref","DOI":"10.1101\/pdb.prot5439","article-title":"Purification of RNA using TRIzol (TRI reagent)","volume":"2010","author":"Rio","year":"2010","journal-title":"Cold Spring Harb. Protoc."},{"key":"10.1016\/j.molp.2024.08.008_bib49","doi-asserted-by":"crossref","first-page":"24","DOI":"10.1038\/nbt.1754","article-title":"Integrative genomics viewer","volume":"29","author":"Robinson","year":"2011","journal-title":"Nat. Biotechnol."},{"key":"10.1016\/j.molp.2024.08.008_bib50","doi-asserted-by":"crossref","first-page":"169","DOI":"10.1016\/j.chom.2015.07.005","article-title":"Posttranslational modifications of the master transcriptional regulator NPR1 enable dynamic but tight control of plant immune responses","volume":"18","author":"Saleh","year":"2015","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.molp.2024.08.008_bib51","doi-asserted-by":"crossref","first-page":"671","DOI":"10.1038\/nmeth.2089","article-title":"NIH Image to ImageJ: 25 years of image analysis","volume":"9","author":"Schneider","year":"2012","journal-title":"Nat. Methods"},{"key":"10.1016\/j.molp.2024.08.008_bib52","doi-asserted-by":"crossref","first-page":"4339","DOI":"10.1038\/s41598-020-61379-3","article-title":"Functional switching of NPR1 between chloroplast and nucleus for adaptive response to salt stress","volume":"10","author":"Seo","year":"2020","journal-title":"Sci. Rep."},{"key":"10.1016\/j.molp.2024.08.008_bib53","doi-asserted-by":"crossref","first-page":"2498","DOI":"10.1101\/gr.1239303","article-title":"Cytoscape: a software environment for integrated models of biomolecular interaction networks","volume":"13","author":"Shannon","year":"2003","journal-title":"Genome Res."},{"key":"10.1016\/j.molp.2024.08.008_bib54","doi-asserted-by":"crossref","first-page":"13","DOI":"10.1186\/s12870-014-0404-2","article-title":"Global nucleosome positioning regulates salicylic acid mediated transcription in Arabidopsis thaliana","volume":"15","author":"Singh","year":"2015","journal-title":"BMC Plant Biol."},{"key":"10.1016\/j.molp.2024.08.008_bib55","doi-asserted-by":"crossref","DOI":"10.7554\/eLife.21856","article-title":"An efficient targeted nuclease strategy for high-resolution mapping of DNA binding sites","volume":"6","author":"Skene","year":"2017","journal-title":"Elife"},{"key":"10.1016\/j.molp.2024.08.008_bib56","doi-asserted-by":"crossref","first-page":"D607","DOI":"10.1093\/nar\/gky1131","article-title":"STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets","volume":"47","author":"Szklarczyk","year":"2019","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.molp.2024.08.008_bib57","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pbio.3001831","article-title":"GBPL3 localizes to the nuclear pore complex and functionally connects the nuclear basket with the nucleoskeleton in plants","volume":"20","author":"Tang","year":"2022","journal-title":"PLoS Biol."},{"key":"10.1016\/j.molp.2024.08.008_bib58","doi-asserted-by":"crossref","first-page":"731","DOI":"10.1038\/nmeth.3901","article-title":"The Perseus computational platform for\u00a0comprehensive analysis of (prote)omics data","volume":"13","author":"Tyanova","year":"2016","journal-title":"Nat. Methods"},{"key":"10.1016\/j.molp.2024.08.008_bib59","doi-asserted-by":"crossref","first-page":"e123","DOI":"10.1371\/journal.ppat.0020123","article-title":"A genomic approach to identify regulatory nodes in the transcriptional network of systemic acquired resistance in plants","volume":"2","author":"Wang","year":"2006","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.molp.2024.08.008_bib60","doi-asserted-by":"crossref","first-page":"311","DOI":"10.1038\/s41586-020-2596-y","article-title":"Structural basis of salicylic acid perception by Arabidopsis NPR proteins","volume":"586","author":"Wang","year":"2020","journal-title":"Nature"},{"key":"10.1016\/j.molp.2024.08.008_bib61","doi-asserted-by":"crossref","first-page":"1279","DOI":"10.1105\/tpc.104.027441","article-title":"Interaction of NIMIN1 with NPR1 modulates PR gene expression in Arabidopsis","volume":"17","author":"Weigel","year":"2005","journal-title":"Plant Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib62","series-title":"ggplot2: Elegant Graphics for Data Analysis","author":"Wickham","year":"2016"},{"key":"10.1016\/j.molp.2024.08.008_bib63","doi-asserted-by":"crossref","first-page":"639","DOI":"10.1016\/j.celrep.2012.05.008","article-title":"The Arabidopsis NPR1 protein is a receptor for the plant defense hormone salicylic acid","volume":"1","author":"Wu","year":"2012","journal-title":"Cell Rep."},{"key":"10.1016\/j.molp.2024.08.008_bib64","doi-asserted-by":"crossref","first-page":"285","DOI":"10.1146\/annurev-arplant-070522-052132","article-title":"Proximity Labeling in Plants","volume":"74","author":"Xu","year":"2023","journal-title":"Annu. Rev. Plant Biol."},{"key":"10.1016\/j.molp.2024.08.008_bib65","doi-asserted-by":"crossref","first-page":"1310","DOI":"10.1105\/tpc.105.037523","article-title":"Physical and functional interactions between pathogen-induced Arabidopsis WRKY18, WRKY40, and WRKY60 transcription factors","volume":"18","author":"Xu","year":"2006","journal-title":"Plant Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib66","doi-asserted-by":"crossref","first-page":"3572","DOI":"10.1093\/nar\/gkae019","article-title":"Genomic overview of INA-induced NPR1 targeting and transcriptional cascades in Arabidopsis","volume":"52","author":"Yun","year":"2024","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.molp.2024.08.008_bib67","doi-asserted-by":"crossref","first-page":"1093","DOI":"10.1016\/j.cell.2020.07.016","article-title":"Formation of NPR1 condensates promotes cell survival during the plant immune response","volume":"182","author":"Zavaliev","year":"2020","journal-title":"Cell"},{"key":"10.1016\/j.molp.2024.08.008_bib68","doi-asserted-by":"crossref","first-page":"484","DOI":"10.1111\/tpj.12216","article-title":"The Arabidopsis Mediator complex subunits MED14\/SWP and MED16\/SFR6\/IEN1 differentially regulate defense gene expression in plant immune responses","volume":"75","author":"Zhang","year":"2013","journal-title":"Plant J."},{"key":"10.1016\/j.molp.2024.08.008_bib69","doi-asserted-by":"crossref","first-page":"6523","DOI":"10.1073\/pnas.96.11.6523","article-title":"Interaction of NPR1 with basic leucine zipper protein transcription factors that bind sequences required for salicylic acid induction of the PR-1 gene","volume":"96","author":"Zhang","year":"1999","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.molp.2024.08.008_bib70","doi-asserted-by":"crossref","first-page":"R137","DOI":"10.1186\/gb-2008-9-9-r137","article-title":"Model-based analysis of ChIP-Seq (MACS)","volume":"9","author":"Zhang","year":"2008","journal-title":"Genome Biol."},{"key":"10.1016\/j.molp.2024.08.008_bib71","doi-asserted-by":"crossref","first-page":"63","DOI":"10.1007\/s00497-018-00358-1","article-title":"Low-input chromatin profiling in Arabidopsis endosperm using CUT&RUN","volume":"32","author":"Zheng","year":"2019","journal-title":"Plant Reprod."},{"key":"10.1016\/j.molp.2024.08.008_bib72","doi-asserted-by":"crossref","first-page":"191","DOI":"10.1094\/MPMI.2000.13.2.191","article-title":"NPR1 differentially interacts with members of the TGA\/OBF family of transcription factors that bind an element of the PR-1 gene required for induction by salicylic acid","volume":"13","author":"Zhou","year":"2000","journal-title":"Mol. Plant Microbe Interact."},{"key":"10.1016\/j.molp.2024.08.008_bib73","doi-asserted-by":"crossref","DOI":"10.1016\/j.celrep.2023.112676","article-title":"Single-cell profiling of Arabidopsis leaves to Pseudomonas syringae infection","volume":"42","author":"Zhu","year":"2023","journal-title":"Cell Rep."},{"key":"10.1016\/j.molp.2024.08.008_bib74","doi-asserted-by":"crossref","DOI":"10.1155\/2010\/840518","article-title":"Mass spectrometry-based label-free quantitative proteomics","volume":"2010","author":"Zhu","year":"2010","journal-title":"J. Biomed. Biotechnol."}],"container-title":["Molecular Plant"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1674205224002636?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1674205224002636?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2024,11,5]],"date-time":"2024-11-05T09:57:18Z","timestamp":1730800638000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1674205224002636"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,10]]},"references-count":74,"journal-issue":{"issue":"10","published-print":{"date-parts":[[2024,10]]}},"alternative-id":["S1674205224002636"],"URL":"https:\/\/doi.org\/10.1016\/j.molp.2024.08.008","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2024.01.03.574047","asserted-by":"object"}]},"ISSN":["1674-2052"],"issn-type":[{"value":"1674-2052","type":"print"}],"subject":[],"published":{"date-parts":[[2024,10]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Next-generation mapping of the salicylic acid signaling hub and transcriptional cascade","name":"articletitle","label":"Article Title"},{"value":"Molecular Plant","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.molp.2024.08.008","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2024 The Author.","name":"copyright","label":"Copyright"}]}}