{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,14]],"date-time":"2026-10-14T23:12:33Z","timestamp":1792019553453,"version":"4.4.0"},"reference-count":88,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2025,1,1]],"date-time":"2025-01-01T00:00:00Z","timestamp":1735689600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,1,1]],"date-time":"2025-01-01T00:00:00Z","timestamp":1735689600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,5,7]],"date-time":"2025-05-07T00:00:00Z","timestamp":1746576000000},"content-version":"vor","delay-in-days":126,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc\/4.0\/"}],"funder":[{"DOI":"10.13039\/100006775","name":"GE HealthCare Technologies Inc","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100006775","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R01 NS060776"],"award-info":[{"award-number":["R01 NS060776"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["R01 NS102646\\u201001A1"],"award-info":[{"award-number":["R01 NS102646\\u201001A1"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["RF1 MH123232"],"award-info":[{"award-number":["RF1 MH123232"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["NeuroImage: Clinical"],"published-print":{"date-parts":[[2025]]},"DOI":"10.1016\/j.nicl.2025.103799","type":"journal-article","created":{"date-parts":[[2025,5,10]],"date-time":"2025-05-10T15:20:53Z","timestamp":1746890453000},"page":"103799","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":2,"special_numbering":"C","title":["Brain activity dynamics after traumatic brain injury indicate increased state transition energy and preference of lower order states"],"prefix":"10.1016","volume":"46","author":[{"given":"Nate","family":"Roy","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"S. Parker","family":"Singleton","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Keith","family":"Jamison","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Pratik","family":"Mukherjee","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sudhin A.","family":"Shah","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Amy","family":"Kuceyeski","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0005","doi-asserted-by":"crossref","first-page":"29","DOI":"10.1111\/nyas.12360","article-title":"The default network and self-generated thought: component processes, dynamic control, and clinical relevance","volume":"1316","author":"Andrews-Hanna","year":"2014","journal-title":"Ann. N. Y. Acad. Sci."},{"issue":"6","key":"10.1016\/j.nicl.2025.103799_b0010","doi-asserted-by":"crossref","first-page":"716","DOI":"10.1111\/cxo.12670","article-title":"Visual problems associated with traumatic brain injury","volume":"101","author":"Armstrong","year":"2018","journal-title":"Clin. Exp. Optom."},{"issue":"2","key":"10.1016\/j.nicl.2025.103799_b0015","doi-asserted-by":"crossref","first-page":"119","DOI":"10.1016\/j.biopsych.2020.06.002","article-title":"Neural correlates associated with suicide and non-suicidal self-injury in youth","volume":"89","author":"Auerbach","year":"2021","journal-title":"Biol. Psychiatry"},{"issue":"18","key":"10.1016\/j.nicl.2025.103799_b0020","doi-asserted-by":"crossref","first-page":"7641","DOI":"10.1073\/pnas.1018985108","article-title":"Dynamic reconfiguration of human brain networks during learning","volume":"108","author":"Bassett","year":"2011","journal-title":"PNAS"},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0025","doi-asserted-by":"crossref","first-page":"90","DOI":"10.1016\/j.neuroimage.2007.04.042","article-title":"A component based noise correction method (CompCor) for BOLD and perfusion based fMRI","volume":"37","author":"Behzadi","year":"2007","journal-title":"Neuroimage"},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0030","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1111\/j.2517-6161.1995.tb02031.x","article-title":"Controlling the false discovery rate: a practical and powerful approach to multiple testing","volume":"57","author":"Benjamini","year":"1995","journal-title":"J. Roy. Stat. Soc.: Ser. B (Methodol.)"},{"issue":"6","key":"10.1016\/j.nicl.2025.103799_b0035","doi-asserted-by":"crossref","first-page":"1249","DOI":"10.1111\/cogs.12126","article-title":"The computational and neural basis of cognitive control: charted territory and new frontiers","volume":"38","author":"Botvinick","year":"2014","journal-title":"Cognit. Sci."},{"issue":"6","key":"10.1016\/j.nicl.2025.103799_b0040","doi-asserted-by":"crossref","first-page":"1860","DOI":"10.1523\/JNEUROSCI.5062-08.2009","article-title":"Cortical hubs revealed by intrinsic functional connectivity: mapping, assessment of stability, and relation to Alzheimer\u2019s disease","volume":"29","author":"Buckner","year":"2009","journal-title":"J. Neurosci."},{"key":"10.1016\/j.nicl.2025.103799_b0045","doi-asserted-by":"crossref","unstructured":"B\u00fcki, A., Povlishock, J.T. 2006. \u201cAll Roads Lead to Disconnection?--Traumatic Axonal Injury Revisited.\u201d Acta Neurochirurgica 148 (2): 181\u201393; discussion 193-194. https:\/\/doi.org\/10.1007\/s00701-005-0674-4.","DOI":"10.1007\/s00701-005-0674-4"},{"issue":"October","key":"10.1016\/j.nicl.2025.103799_b0050","doi-asserted-by":"crossref","first-page":"84","DOI":"10.1016\/j.neuroimage.2017.03.045","article-title":"Functional connectivity dynamically evolves on multiple time-scales over a static structural connectome: models and mechanisms","volume":"160","author":"Cabral","year":"2017","journal-title":"Neuroimage"},{"issue":"8","key":"10.1016\/j.nicl.2025.103799_b0055","doi-asserted-by":"crossref","first-page":"651","DOI":"10.1089\/brain.2020.0866","article-title":"Topological aberrance of structural brain network provides quantitative substrates of post-traumatic brain injury attention deficits in children","volume":"11","author":"Cao","year":"2021","journal-title":"Brain Connect."},{"issue":"3","key":"10.1016\/j.nicl.2025.103799_b0060","doi-asserted-by":"crossref","first-page":"564","DOI":"10.3171\/2009.12.JNS09689","article-title":"Role of extracellular glutamate measured by cerebral microdialysis in severe traumatic brain injury","volume":"113","author":"Chamoun","year":"2010","journal-title":"J. Neurosurg."},{"issue":"7","key":"10.1016\/j.nicl.2025.103799_b0065","doi-asserted-by":"crossref","first-page":"429","DOI":"10.1089\/brain.2018.0586","article-title":"The human brain traverses a common activation-pattern state space across task and rest","volume":"8","author":"Chen","year":"2018","journal-title":"Brain Connect."},{"issue":"7","key":"10.1016\/j.nicl.2025.103799_b0070","doi-asserted-by":"crossref","first-page":"846","DOI":"10.1080\/02699052.2019.1606449","article-title":"Longitudinal examination of the relationship between changes in white matter organization and cognitive outcome in chronic TBI","volume":"33","author":"Chiou","year":"2019","journal-title":"Brain Inj."},{"issue":"48","key":"10.1016\/j.nicl.2025.103799_b0075","doi-asserted-by":"crossref","first-page":"12083","DOI":"10.1523\/JNEUROSCI.2965-15.2016","article-title":"The segregation and integration of distinct brain networks and their relationship to cognition","volume":"36","author":"Cohen","year":"2016","journal-title":"J. Neurosci."},{"issue":"4","key":"10.1016\/j.nicl.2025.103799_b0080","doi-asserted-by":"crossref","first-page":"3132","DOI":"10.1016\/j.neuroimage.2009.11.001","article-title":"Identifying the brain\u2019s most globally connected regions","volume":"49","author":"Cole","year":"2010","journal-title":"Neuroimage"},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0085","doi-asserted-by":"crossref","first-page":"261","DOI":"10.1038\/s42003-020-0961-x","article-title":"Temporal sequences of brain activity at rest are constrained by white matter structure and modulated by cognitive demands","volume":"3","author":"Cornblath","year":"2020","journal-title":"Commun. Biol."},{"issue":"8","key":"10.1016\/j.nicl.2025.103799_b0090","doi-asserted-by":"crossref","first-page":"1856","DOI":"10.1093\/cercor\/bhm207","article-title":"Reduced resting-state brain activity in the \u2018default network\u2019 in normal aging","volume":"18","author":"Damoiseaux","year":"2008","journal-title":"Cerebral Cortex (New York, N.Y.: 1991)"},{"issue":"6","key":"10.1016\/j.nicl.2025.103799_b0095","doi-asserted-by":"crossref","first-page":"541","DOI":"10.3390\/e21060541","article-title":"Approximate entropy and sample entropy: a comprehensive tutorial","volume":"21","author":"Delgado-Bonal","year":"2019","journal-title":"Entropy"},{"issue":"4","key":"10.1016\/j.nicl.2025.103799_b0100","doi-asserted-by":"crossref","first-page":"1480","DOI":"10.3390\/s22041480","article-title":"Gait impairment in traumatic brain injury: a systematic review","volume":"22","author":"Dever","year":"2022","journal-title":"Sensors (Basel, Switzerland)"},{"issue":"2","key":"10.1016\/j.nicl.2025.103799_b0105","doi-asserted-by":"crossref","first-page":"215","DOI":"10.1016\/j.pmr.2016.12.001","article-title":"Pathophysiology of traumatic brain injury","volume":"28","author":"Dixon","year":"2017","journal-title":"Phys. Med. Rehabil. Clin. N. Am."},{"issue":"3","key":"10.1016\/j.nicl.2025.103799_b0110","doi-asserted-by":"crossref","first-page":"340","DOI":"10.1162\/089892902317361886","article-title":"Testing the efficiency and independence of attentional networks","volume":"14","author":"Fan","year":"2002","journal-title":"J. Cogn. Neurosci."},{"key":"10.1016\/j.nicl.2025.103799_b0115","doi-asserted-by":"crossref","unstructured":"Faul, M., Victor Coronado. 2015. \u201cEpidemiology of Traumatic Brain Injury.\u201d In Handbook of Clinical Neurology, 127:3\u201313. Elsevier. https:\/\/doi.org\/10.1016\/B978-0-444-52892-6.00001-5.","DOI":"10.1016\/B978-0-444-52892-6.00001-5"},{"issue":"2","key":"10.1016\/j.nicl.2025.103799_b0120","doi-asserted-by":"crossref","first-page":"774","DOI":"10.1016\/j.neuroimage.2012.01.021","article-title":"FreeSurfer","volume":"62","author":"Fischl","year":"2012","journal-title":"Neuroimage"},{"issue":"Pt B","key":"10.1016\/j.nicl.2025.103799_b0125","doi-asserted-by":"crossref","first-page":"75","DOI":"10.1016\/j.mcn.2015.03.001","article-title":"Epidemiology of mild traumatic brain injury and neurodegenerative disease","volume":"66","author":"Gardner","year":"2015","journal-title":"Mol. Cell. Neurosci."},{"issue":"2\u20133","key":"10.1016\/j.nicl.2025.103799_b0130","doi-asserted-by":"crossref","first-page":"97","DOI":"10.1016\/j.forsciint.2004.06.027","article-title":"Long-term intracerebral inflammatory response after traumatic brain injury","volume":"146","author":"Gentleman","year":"2004","journal-title":"Forensic Sci. Int."},{"issue":"October","key":"10.1016\/j.nicl.2025.103799_b0135","doi-asserted-by":"crossref","first-page":"105","DOI":"10.1016\/j.neuroimage.2013.04.127","article-title":"The minimal preprocessing pipelines for the human connectome project","volume":"80","author":"Glasser","year":"2013","journal-title":"Neuroimage"},{"issue":"3","key":"10.1016\/j.nicl.2025.103799_b0140","first-page":"321","article-title":"Cognitive impairment and health-related quality of life following traumatic brain injury","volume":"44","author":"Gorgoraptis","year":"2019","journal-title":"NeuroRehabilitation"},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0145","doi-asserted-by":"crossref","first-page":"8414","DOI":"10.1038\/ncomms9414","article-title":"Controllability of structural brain networks","volume":"6","author":"Gu","year":"2015","journal-title":"Nat. Commun."},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0150","doi-asserted-by":"crossref","first-page":"4894","DOI":"10.1038\/s41467-021-25184-4","article-title":"Heritability and interindividual variability of regional structure-function coupling","volume":"12","author":"Gu","year":"2021","journal-title":"Nat. Commun."},{"key":"10.1016\/j.nicl.2025.103799_b0155","doi-asserted-by":"crossref","first-page":"157","DOI":"10.1016\/B978-0-444-52892-6.00010-6","article-title":"Acute sports-related traumatic brain injury and repetitive concussion","volume":"127","author":"Guskiewicz","year":"2015","journal-title":"Handb. Clin. Neurol."},{"issue":"14","key":"10.1016\/j.nicl.2025.103799_b0160","doi-asserted-by":"crossref","first-page":"2295","DOI":"10.1016\/j.cub.2019.06.017","article-title":"Infraslow state fluctuations govern spontaneous fMRI network dynamics","volume":"29","author":"Gutierrez-Barragan","year":"2019","journal-title":"Curr. Biol."},{"issue":"3","key":"10.1016\/j.nicl.2025.103799_b0165","doi-asserted-by":"crossref","first-page":"219","DOI":"10.1007\/s11910-022-01184-9","article-title":"Neuro-visual and vestibular manifestations of concussion and mild TBI","volume":"22","author":"Hac","year":"2022","journal-title":"Curr. Neurol. Neurosci. Rep."},{"issue":"December","key":"10.1016\/j.nicl.2025.103799_b0170","doi-asserted-by":"crossref","first-page":"972","DOI":"10.1016\/j.neuroimage.2018.09.060","article-title":"Extending the human connectome project across ages: imaging protocols for the lifespan development and aging projects","volume":"183","author":"Harms","year":"2018","journal-title":"Neuroimage"},{"issue":"45","key":"10.1016\/j.nicl.2025.103799_b0175","doi-asserted-by":"crossref","DOI":"10.1126\/sciadv.abn2293","article-title":"Uncovering the biological basis of control energy: structural and metabolic correlates of energy inefficiency in temporal lobe epilepsy","volume":"8","author":"He","year":"2022","journal-title":"Sci. Adv."},{"issue":"5","key":"10.1016\/j.nicl.2025.103799_b0180","doi-asserted-by":"crossref","first-page":"413","DOI":"10.1016\/j.biopsych.2021.09.024","article-title":"Mental health consequences of traumatic brain injury","volume":"91","author":"Howlett","year":"2022","journal-title":"Biol. Psychiatry"},{"issue":"April","key":"10.1016\/j.nicl.2025.103799_b0185","doi-asserted-by":"crossref","first-page":"128","DOI":"10.1016\/j.neubiorev.2019.01.002","article-title":"The structural connectome in traumatic brain injury: a meta-analysis of graph metrics","volume":"99","author":"Imms","year":"2019","journal-title":"Neurosci. Biobehav. Rev."},{"key":"10.1016\/j.nicl.2025.103799_b0190","article-title":"Brain networks subserving emotion regulation and adaptation after mild traumatic brain injury","author":"van der Horn","year":"2015","journal-title":"J. Neurotrauma"},{"issue":"2","key":"10.1016\/j.nicl.2025.103799_b0195","doi-asserted-by":"crossref","first-page":"143","DOI":"10.1016\/j.acn.2006.12.002","article-title":"Criterion validity of the California verbal learning test-second edition (CVLT-II) after traumatic brain injury","volume":"22","author":"Jacobs","year":"2007","journal-title":"Arch. Clin. Neuropsychol."},{"issue":"Pt 1","key":"10.1016\/j.nicl.2025.103799_b0200","doi-asserted-by":"crossref","first-page":"28","DOI":"10.1093\/brain\/aws322","article-title":"Inflammation and white matter degeneration persist for years after a single traumatic brain injury","volume":"136","author":"Johnson","year":"2013","journal-title":"Brain J. Neurol."},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0205","doi-asserted-by":"crossref","first-page":"7751","DOI":"10.1038\/ncomms8751","article-title":"Transient brain activity disentangles fMRI resting-state dynamics in terms of spatially and temporally overlapping networks","volume":"6","author":"Karahano\u011flu","year":"2015","journal-title":"Nat. Commun."},{"issue":"2","key":"10.1016\/j.nicl.2025.103799_b0210","doi-asserted-by":"crossref","DOI":"10.1088\/1741-2552\/ab6e8b","article-title":"A practical guide to methodological considerations in the controllability of structural brain networks","volume":"17","author":"Karrer","year":"2020","journal-title":"J. Neural Eng."},{"issue":"15","key":"10.1016\/j.nicl.2025.103799_b0215","doi-asserted-by":"crossref","first-page":"4441","DOI":"10.1002\/hbm.24713","article-title":"Longitudinal increases in structural connectome segregation and functional connectome integration are associated with better recovery after mild TBI","volume":"40","author":"Kuceyeski","year":"2019","journal-title":"Hum. Brain Mapp."},{"issue":"10","key":"10.1016\/j.nicl.2025.103799_b0220","doi-asserted-by":"crossref","first-page":"1518","DOI":"10.1089\/neu.2006.23.1518","article-title":"Decreased expression of glutamate transporters in astrocytes after human traumatic brain injury","volume":"23","author":"Landeghem","year":"2006","journal-title":"J. Neurotrauma"},{"issue":"11","key":"10.1016\/j.nicl.2025.103799_b0225","doi-asserted-by":"crossref","first-page":"4392","DOI":"10.1073\/pnas.1216856110","article-title":"Time-varying functional network information extracted from brief instances of spontaneous brain activity","volume":"110","author":"Liu","year":"2013","journal-title":"PNAS"},{"issue":"7","key":"10.1016\/j.nicl.2025.103799_b0230","doi-asserted-by":"crossref","first-page":"1123","DOI":"10.1089\/neu.2008.0802","article-title":"Alterations in blood-brain barrier permeability to large and small molecules and leukocyte accumulation after traumatic brain injury: effects of post-traumatic hypothermia","volume":"26","author":"Lotocki","year":"2009","journal-title":"J. Neurotrauma"},{"key":"10.1016\/j.nicl.2025.103799_b0235","doi-asserted-by":"crossref","unstructured":"Luppi, Andrea I., Parker Singleton, S., Justine Y. Hansen, Danilo Bzdok, Amy Kuceyeski, Richard F. Betzel, Bratislav Misic. 2023. \u201cTransitions between Cognitive Topographies: Contributions of Network Structure, Neuromodulation, and Disease.\u201d bioRxiv. https:\/\/doi.org\/10.1101\/2023.03.16.532981.","DOI":"10.1101\/2023.03.16.532981"},{"issue":"5\u20136","key":"10.1016\/j.nicl.2025.103799_b0240","doi-asserted-by":"crossref","first-page":"358","DOI":"10.1089\/neu.2021.0348","article-title":"Symptom frequency and persistence in the first year after traumatic brain injury: a TRACK-TBI study","volume":"39","author":"Machamer","year":"2022","journal-title":"J. Neurotrauma"},{"issue":"44","key":"10.1016\/j.nicl.2025.103799_b0245","doi-asserted-by":"crossref","first-page":"12574","DOI":"10.1073\/pnas.1608282113","article-title":"Situating the default-mode network along a principal gradient of macroscale cortical organization","volume":"113","author":"Margulies","year":"2016","journal-title":"Proc. Natl. Acad. Sci."},{"issue":"11","key":"10.1016\/j.nicl.2025.103799_b0250","doi-asserted-by":"crossref","first-page":"1825","DOI":"10.1002\/hbm.21151","article-title":"Functional connectivity in mild traumatic brain injury","volume":"32","author":"Mayer","year":"2011","journal-title":"Hum. Brain Mapp."},{"issue":"3","key":"10.1016\/j.nicl.2025.103799_b0255","doi-asserted-by":"crossref","first-page":"309","DOI":"10.4085\/1062-6050-52.1.14","article-title":"Long-term cognitive and neuropsychiatric consequences of repetitive concussion and head-impact exposure","volume":"52","author":"McAllister","year":"2017","journal-title":"J. Athl. Train."},{"issue":"6","key":"10.1016\/j.nicl.2025.103799_b0260","doi-asserted-by":"crossref","first-page":"893","DOI":"10.1682\/JRRD.2008.08.0106","article-title":"Minimizing the effect of TBI-related physical sequelae on vocational return","volume":"46","author":"McNamee","year":"2009","journal-title":"J. Rehabil. Res. Dev."},{"issue":"20","key":"10.1016\/j.nicl.2025.103799_b0265","doi-asserted-by":"crossref","first-page":"2169","DOI":"10.1089\/neu.2020.7063","article-title":"Alterations in network connectivity after traumatic brain injury in mice","volume":"37","author":"Meningher","year":"2020","journal-title":"J. Neurotrauma"},{"issue":"3","key":"10.1016\/j.nicl.2025.103799_b0270","doi-asserted-by":"crossref","first-page":"1129","DOI":"10.1002\/hbm.25714","article-title":"Unveiling whole-brain dynamics in normal aging through hidden markov models","volume":"43","author":"Moretto","year":"2022","journal-title":"Hum. Brain Mapp."},{"key":"10.1016\/j.nicl.2025.103799_b0275","doi-asserted-by":"crossref","first-page":"528","DOI":"10.3389\/fncel.2019.00528","article-title":"Traumatic brain injuries: pathophysiology and potential therapeutic targets","volume":"13","author":"Ng","year":"2019","journal-title":"Front. Cell. Neurosci."},{"key":"10.1016\/j.nicl.2025.103799_b0280","series-title":"CONN Functional Connectivity Toolbox: RRID SCR_009550, Release 21","author":"Nieto-Castanon","year":"2021"},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0285","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1038\/s42003-022-03950-4","article-title":"Frontoparietal network activation is associated with motor recovery in ischemic stroke patients","volume":"5","author":"Olafson","year":"2022","journal-title":"Commun. Biol."},{"issue":"5","key":"10.1016\/j.nicl.2025.103799_b0290","doi-asserted-by":"crossref","first-page":"589","DOI":"10.1080\/02699052.2017.1291991","article-title":"The consequence of spatial visual processing dysfunction caused by traumatic brain injury (TBI)","volume":"31","author":"Padula","year":"2017","journal-title":"Brain Inj."},{"issue":"8","key":"10.1016\/j.nicl.2025.103799_b0295","doi-asserted-by":"crossref","first-page":"1546","DOI":"10.1089\/neu.2016.4752","article-title":"Resting-state functional connectivity alterations associated with six-month outcomes in mild traumatic brain injury","volume":"34","author":"Palacios","year":"2017","journal-title":"J. Neurotrauma"},{"issue":"6158","key":"10.1016\/j.nicl.2025.103799_b0300","doi-asserted-by":"crossref","DOI":"10.1126\/science.1238411","article-title":"Structural and functional brain networks: from connections to cognition","volume":"342","author":"Park","year":"2013","journal-title":"Science"},{"key":"10.1016\/j.nicl.2025.103799_b0305","doi-asserted-by":"crossref","unstructured":"Parkes Linden, Jason Z. Kim, Jennifer Stiso, Julia K. Brynildsen, Matthew Cieslak, Sydney Covitz, Raquel E. Gur, et al., 2023. \u201cUsing Network Control Theory to Study the Dynamics of the Structural Connectome.\u201d bioRxiv. https:\/\/doi.org\/10.1101\/2023.08.23.554519.","DOI":"10.1101\/2023.08.23.554519"},{"issue":"50","key":"10.1016\/j.nicl.2025.103799_b0310","doi-asserted-by":"crossref","DOI":"10.1126\/sciadv.add2185","article-title":"Asymmetric signaling across the hierarchy of cytoarchitecture within the human connectome","volume":"8","author":"Parkes","year":"2022","journal-title":"Sci. Adv."},{"issue":"13","key":"10.1016\/j.nicl.2025.103799_b0315","doi-asserted-by":"crossref","first-page":"1211","DOI":"10.1089\/neu.2013.3255","article-title":"The spectrum of neurobehavioral sequelae after repetitive mild traumatic brain injury: a novel mouse model of chronic traumatic encephalopathy","volume":"31","author":"Petraglia","year":"2014","journal-title":"J. Neurotrauma"},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0320","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1111\/j.1750-3639.1991.tb00050.x","article-title":"Traumatically induced axonal injury: pathogenesis and pathobiological implications","volume":"2","author":"Povlishock","year":"1992","journal-title":"Brain Pathol. (Zurich, Switzerland)"},{"issue":"January","key":"10.1016\/j.nicl.2025.103799_b0325","doi-asserted-by":"crossref","first-page":"320","DOI":"10.1016\/j.neuroimage.2013.08.048","article-title":"Methods to detect, characterize, and remove motion artifact in resting state fMRI","volume":"84","author":"Power","year":"2014","journal-title":"Neuroimage"},{"issue":"4","key":"10.1016\/j.nicl.2025.103799_b0330","doi-asserted-by":"crossref","first-page":"798","DOI":"10.1016\/j.neuron.2013.07.035","article-title":"Evidence for hubs in human functional brain networks","volume":"79","author":"Power","year":"2013","journal-title":"Neuron"},{"key":"10.1016\/j.nicl.2025.103799_b0335","article-title":"Neuropsychiatric sequelae of traumatic brain injury","author":"Rao","year":"2000","journal-title":"Traum. Brain Inj."},{"issue":"August","key":"10.1016\/j.nicl.2025.103799_b0340","doi-asserted-by":"crossref","first-page":"10","DOI":"10.1016\/j.neurobiolaging.2021.03.013","article-title":"Default mode network connectivity and cognition in the aging brain: the effects of age, sex, and APOE genotype","volume":"104","author":"Shafer","year":"2021","journal-title":"Neurobiol. Aging"},{"issue":"2","key":"10.1016\/j.nicl.2025.103799_b0345","doi-asserted-by":"crossref","first-page":"382","DOI":"10.1016\/j.apmr.2019.10.179","article-title":"Management of concussion and mild traumatic brain injury: a synthesis of practice guidelines","volume":"101","author":"Silverberg","year":"2020","journal-title":"Arch. Phys. Med. Rehabil."},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0350","doi-asserted-by":"crossref","first-page":"5812","DOI":"10.1038\/s41467-022-33578-1","article-title":"Receptor-informed network control theory links LSD and psilocybin to a flattening of the brain\u2019s control energy landscape","volume":"13","author":"Singleton","year":"2022","journal-title":"Nat. Commun."},{"key":"10.1016\/j.nicl.2025.103799_b0355","doi-asserted-by":"crossref","unstructured":"Singleton, S. Parker, Christopher Timmermann, Andrea I. Luppi, Emma Eckern\u00e4s, Leor Roseman, Robin L. Carhart-Harris, Amy Kuceyeski. 2023. \u201cTime-Resolved Network Control Analysis Links Reduced Control Energy under DMT with the Serotonin 2a Receptor, Signal Diversity, and Subjective Experience.\u201d bioRxiv: The Preprint Server for Biology, May, 2023.05.11.540409. https:\/\/doi.org\/10.1101\/2023.05.11.540409.","DOI":"10.1101\/2023.05.11.540409"},{"key":"10.1016\/j.nicl.2025.103799_b0360","doi-asserted-by":"crossref","unstructured":"Singleton, S. Parker, Puneet Velidi, Louisa Schilling, Andrea I. Luppi, Keith Jamison, Linden Parkes, and Amy Kuceyeski. 2023. \u201cAltered Structural Connectivity and Functional Brain Dynamics in Individuals with Heavy Alcohol Use.\u201d bioRxiv. https:\/\/doi.org\/10.1101\/2023.11.27.568762.","DOI":"10.1101\/2023.11.27.568762"},{"issue":"38","key":"10.1016\/j.nicl.2025.103799_b0365","doi-asserted-by":"crossref","first-page":"15226","DOI":"10.1523\/JNEUROSCI.2261-13.2013","article-title":"Structural covariance of the default network in healthy and pathological aging","volume":"33","author":"Spreng","year":"2013","journal-title":"J. Neurosci."},{"issue":"5","key":"10.1016\/j.nicl.2025.103799_b0370","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0096505","article-title":"Disrupted functional brain connectivity and its association to structural connectivity in amnestic mild cognitive impairment and Alzheimer\u2019s disease","volume":"9","author":"Sun","year":"2014","journal-title":"PLoS One"},{"issue":"5","key":"10.1016\/j.nicl.2025.103799_b0375","doi-asserted-by":"crossref","first-page":"471","DOI":"10.1038\/mp.2012.27","article-title":"Functional connectivity density and the aging brain","volume":"17","author":"Tomasi","year":"2012","journal-title":"Mol. Psychiatry"},{"issue":"8","key":"10.1016\/j.nicl.2025.103799_b0380","doi-asserted-by":"crossref","first-page":"863","DOI":"10.3390\/e22080863","article-title":"New fast ApEn and SampEn entropy algorithms implementation and their application to supercomputer power consumption","volume":"22","author":"Tom\u010dala","year":"2020","journal-title":"Entropy"},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0385","doi-asserted-by":"crossref","first-page":"53","DOI":"10.1002\/ima.22005","article-title":"MRtrix: diffusion tractography in crossing fiber regions","volume":"22","author":"Tournier","year":"2012","journal-title":"Int. J. Imaging Syst. Technol."},{"issue":"2","key":"10.1016\/j.nicl.2025.103799_b0390","first-page":"539","article-title":"Larger lesion volume in people with multiple sclerosis is associated with increased transition energies between brain states and decreased entropy of brain activity","volume":"7","author":"Tozlu","year":"2023","journal-title":"Netw. Neurosci. (Cambridge, Mass.)"},{"issue":"November","key":"10.1016\/j.nicl.2025.103799_b0395","article-title":"Traumatic brain injury (TBI) in collision sports: possible mechanisms of transformation into chronic traumatic encephalopathy (CTE)","volume":"100S","author":"VanItallie","year":"2019","journal-title":"Metab. Clin. Exp."},{"key":"10.1016\/j.nicl.2025.103799_b0400","doi-asserted-by":"crossref","first-page":"234","DOI":"10.3389\/fnagi.2019.00234","article-title":"The effect of aging on resting state connectivity of predefined networks in the brain","volume":"11","author":"Varangis","year":"2019","journal-title":"Front. Aging Neurosci."},{"issue":"48","key":"10.1016\/j.nicl.2025.103799_b0405","doi-asserted-by":"crossref","first-page":"12827","DOI":"10.1073\/pnas.1705120114","article-title":"Brain network dynamics are hierarchically organized in time","volume":"114","author":"Vidaurre","year":"2017","journal-title":"PNAS"},{"issue":"9","key":"10.1016\/j.nicl.2025.103799_b0410","doi-asserted-by":"crossref","first-page":"745","DOI":"10.1089\/brain.2020.0852","article-title":"Decoupling of structural and functional connectivity in hubs and cognitive impairment after mild traumatic brain injury","volume":"11","author":"Wang","year":"2021","journal-title":"Brain Connect."},{"issue":"13","key":"10.1016\/j.nicl.2025.103799_b0415","doi-asserted-by":"crossref","first-page":"7621","DOI":"10.3390\/ijerph19137621","article-title":"Bottom-up and cognitive top-down emotion regulation: experiential emotion regulation and cognitive reappraisal on stress relief and follow-up sleep physiology","volume":"19","author":"Wang","year":"2022","journal-title":"Int. J. Environ. Res. Public Health"},{"issue":"3","key":"10.1016\/j.nicl.2025.103799_b0420","article-title":"Brain entropy mapping using fMRI. Edited by Satoru Hayasaka","volume":"9","author":"Wang","year":"2014","journal-title":"PLoS One"},{"issue":"1","key":"10.1016\/j.nicl.2025.103799_b0425","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1089\/neu.1997.14.23","article-title":"Mitochondrial dysfunction and calcium perturbation induced by traumatic brain injury","volume":"14","author":"Xiong","year":"1997","journal-title":"J. Neurotrauma"},{"issue":"3","key":"10.1016\/j.nicl.2025.103799_b0430","doi-asserted-by":"crossref","first-page":"1125","DOI":"10.1152\/jn.00338.2011","article-title":"The organization of the human cerebral cortex estimated by intrinsic functional connectivity","volume":"106","author":"Yeo","year":"2011","journal-title":"J. Neurophysiol."},{"issue":"6","key":"10.1016\/j.nicl.2025.103799_b0435","doi-asserted-by":"crossref","first-page":"378","DOI":"10.1097\/HTR.0000000000000318","article-title":"Structural connectivity related to persistent symptoms after mild TBI in adolescents and response to aerobic training: preliminary investigation","volume":"32","author":"Yuan","year":"2017","journal-title":"J. Head Trauma Rehabil."},{"issue":"April","key":"10.1016\/j.nicl.2025.103799_b0440","doi-asserted-by":"crossref","first-page":"432","DOI":"10.1016\/j.neuroimage.2019.01.041","article-title":"Patterns of functional connectivity in an aging population: the Rotterdam study","volume":"189","author":"Zonneveld","year":"2019","journal-title":"Neuroimage"}],"container-title":["NeuroImage: Clinical"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2213158225000695?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S2213158225000695?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,6,4]],"date-time":"2025-06-04T07:51:43Z","timestamp":1749023503000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S2213158225000695"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025]]},"references-count":88,"alternative-id":["S2213158225000695"],"URL":"https:\/\/doi.org\/10.1016\/j.nicl.2025.103799","relation":{},"ISSN":["2213-1582"],"issn-type":[{"value":"2213-1582","type":"print"}],"subject":[],"published":{"date-parts":[[2025]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Brain activity dynamics after traumatic brain injury indicate increased state transition energy and preference of lower order states","name":"articletitle","label":"Article Title"},{"value":"NeuroImage: Clinical","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.nicl.2025.103799","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 The Author(s). Published by Elsevier Inc.","name":"copyright","label":"Copyright"}],"article-number":"103799"}}