{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,5]],"date-time":"2026-09-05T02:58:20Z","timestamp":1788577100938,"version":"build-2803163510"},"reference-count":40,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2021,1,1]],"date-time":"2021-01-01T00:00:00Z","timestamp":1609459200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2021,1,1]],"date-time":"2021-01-01T00:00:00Z","timestamp":1609459200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"}],"funder":[{"DOI":"10.13039\/501100003593","name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100003593","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004263","name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado do Rio Grande do Sul","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100004263","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100002322","name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100002322","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Plant Physiology and Biochemistry"],"published-print":{"date-parts":[[2021,1]]},"DOI":"10.1016\/j.plaphy.2020.11.051","type":"journal-article","created":{"date-parts":[[2020,11,30]],"date-time":"2020-11-30T20:12:35Z","timestamp":1606767155000},"page":"113-124","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":18,"special_numbering":"C","title":["The copper economy response is partially conserved in rice (Oryza sativa L.)"],"prefix":"10.1016","volume":"158","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-2218-5291","authenticated-orcid":false,"given":"Bruno Bachiega","family":"Navarro","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bianca Knebel","family":"Del Frari","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Pedro Vinicius da Cruz","family":"Dias","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Liliani Elisa","family":"Lemainski","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rafaella Boemo","family":"Mario","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4304-8608","authenticated-orcid":false,"given":"Lucas Roani","family":"Ponte","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrei","family":"Goergen","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9488-9773","authenticated-orcid":false,"given":"Camila Peligrinotti","family":"Tarouco","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6436-5047","authenticated-orcid":false,"given":"Vinicius Machado","family":"Neves","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Valderi Luiz","family":"Dressler","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Janette Palma","family":"Fett","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gustavo","family":"Brunetto","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Raul Antonio","family":"Sperotto","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fernando Teixeira","family":"Nicoloso","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Felipe Klein","family":"Ricachenevsky","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.plaphy.2020.11.051_bib1","doi-asserted-by":"crossref","first-page":"15932","DOI":"10.1074\/jbc.M801406200","article-title":"MicroRNA-mediated systemic down-regulation of copper protein expression in response to low copper availability in Arabidopsis","volume":"283","author":"Abdel-Ghany","year":"2008","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.plaphy.2020.11.051_bib2","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1007\/s11103-017-0622-8","article-title":"Copper and ectopic expression of the Arabidopsis transport protein COPT1 alter iron homeostasis in rice (Oryza sativa L.)","volume":"95","author":"Andres-Borderia","year":"2017","journal-title":"Plant Mol. Biol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib3","doi-asserted-by":"crossref","first-page":"738","DOI":"10.1105\/tpc.111.090431","article-title":"Transcriptome sequencing identifies SPL7-regulated copper acquisition genes FRO4\/FRO5 and the copper dependence of iron homeostasis in Arabidopsis","volume":"24","author":"Bernal","year":"2012","journal-title":"Plant Cell"},{"key":"10.1016\/j.plaphy.2020.11.051_bib4","doi-asserted-by":"crossref","first-page":"799","DOI":"10.1111\/j.1469-8137.2009.02846.x","article-title":"Copper homeostasis","volume":"182","author":"Burkhead","year":"2009","journal-title":"New Phytol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib5","doi-asserted-by":"crossref","first-page":"1336","DOI":"10.1093\/mp\/ssp084","article-title":"Copper delivery by the copper chaperone for chloroplast and cytosolic copper\/zinc-superoxide dismutases: regulation and unexpected phenotypes in an Arabidopsis mutant","volume":"2","author":"Cohu","year":"2009","journal-title":"Mol. Plant"},{"key":"10.1016\/j.plaphy.2020.11.051_bib6","doi-asserted-by":"crossref","first-page":"W49","DOI":"10.1093\/nar\/gky316","article-title":"psRNATarget: a plant small RNA target analysis server (2017 release)","volume":"46","author":"Dai","year":"2018","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.plaphy.2020.11.051_bib7","doi-asserted-by":"crossref","first-page":"1353","DOI":"10.1104\/pp.113.226225","article-title":"A member of the heavy metal P-type ATPase OsHMA5 is involved in xylem loading of copper in rice","volume":"163","author":"Deng","year":"2013","journal-title":"Plant Physiol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib8","doi-asserted-by":"crossref","first-page":"37","DOI":"10.1016\/j.apsoil.2015.02.008","article-title":"Rhizophagus clarus and phosphate alter the physiological responses of Crotalaria juncea cultivated in soil with a high Cu level","volume":"91","author":"Ferreira","year":"2015","journal-title":"Appl. Soil Ecol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib9","doi-asserted-by":"crossref","first-page":"87","DOI":"10.1016\/S0304-4165(89)80016-9","article-title":"The relationship between the quantum yield of photosynthetic electron transport and quenching of chlorophyll fluorescence","volume":"990","author":"Genty","year":"1989","journal-title":"Biochim. Biophys. Acta"},{"key":"10.1016\/j.plaphy.2020.11.051_bib10","doi-asserted-by":"crossref","first-page":"757","DOI":"10.1016\/j.jplph.2009.12.004","article-title":"Over-expression of superoxide dismutase exhibits lignification of vascular structures in Arabidopsis thaliana","volume":"167","author":"Gill","year":"2010","journal-title":"J. Plant Physiol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib11","doi-asserted-by":"crossref","first-page":"10375","DOI":"10.1007\/s11356-015-4532-5","article-title":"Superoxide dismutase--mentor of abiotic stress tolerance in crop plants","volume":"22","author":"Gill","year":"2015","journal-title":"Environ. Sci. Pollut. Res. Int."},{"key":"10.1016\/j.plaphy.2020.11.051_bib13","doi-asserted-by":"crossref","first-page":"737","DOI":"10.1104\/pp.111.190223","article-title":"Copper chaperone-dependent and -independent activation of three copper-zinc superoxide dismutase homologs localized in different cellular compartments in Arabidopsis","volume":"158","author":"Huang","year":"2012","journal-title":"Plant Physiol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib12","doi-asserted-by":"crossref","first-page":"1132","DOI":"10.1139\/b79-163","article-title":"A method for the extraction of chlorophyll from leaf tissue without maceration","volume":"57","author":"Hiscox","year":"1979","journal-title":"Can. J. Bot."},{"key":"10.1016\/j.plaphy.2020.11.051_bib14","doi-asserted-by":"crossref","first-page":"12138","DOI":"10.1038\/ncomms12138","article-title":"A heavy metal P-type ATPase OsHMA4 prevents copper accumulation in rice grain","volume":"7","author":"Huang","year":"2016","journal-title":"Nat. Commun."},{"key":"10.1016\/j.plaphy.2020.11.051_bib15","doi-asserted-by":"crossref","first-page":"350","DOI":"10.1016\/0076-6879(87)48036-1","article-title":"Chlorophylls and carotenoids pigments of photosynthetic bio membranes","volume":"148","author":"Lichtenthaler","year":"1987","journal-title":"Methods Enzymol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib16","doi-asserted-by":"crossref","first-page":"2817","DOI":"10.4238\/2011.November.10.4","article-title":"Aluminum triggers broad changes in microRNA expression in rice roots","volume":"10","author":"Lima","year":"2011","journal-title":"Genet. Mol. Res. : GMR"},{"key":"10.1016\/j.plaphy.2020.11.051_bib17","doi-asserted-by":"crossref","first-page":"1781","DOI":"10.1104\/pp.010497","article-title":"Isoprene produced by leaves protects the photosynthetic apparatus against ozone damage, quenches ozone products, and reduces lipid peroxidation of cellular membranes","volume":"127","author":"Loreto","year":"2001","journal-title":"Plant Physiol."},{"issue":"345","key":"10.1016\/j.plaphy.2020.11.051_bib18","doi-asserted-by":"crossref","first-page":"659","DOI":"10.1093\/jexbot\/51.345.659","article-title":"Chlorophyll fluorescence\u2014a practical guide","volume":"51","author":"Maxwell","year":"2000","journal-title":"J. Exp. Bot."},{"key":"10.1016\/j.plaphy.2020.11.051_bib19","doi-asserted-by":"crossref","first-page":"737","DOI":"10.1002\/iub.1437","article-title":"Copper-transporting ATPases: the evolutionarily conserved machineries for balancing copper in living systems","volume":"67","author":"Migocka","year":"2015","journal-title":"IUBMB Life"},{"key":"10.1016\/j.plaphy.2020.11.051_bib20","doi-asserted-by":"crossref","first-page":"45","DOI":"10.1007\/s13258-013-0138-9","article-title":"Developmental stage-dependent differential gene expression of superoxide dismutase isoenzymes and their localization and physical interaction network in rice (Oryza sativa L.)","volume":"36","author":"Nath","year":"2014","journal-title":"Genes Genom"},{"key":"10.1016\/j.plaphy.2020.11.051_bib21","doi-asserted-by":"crossref","first-page":"31","DOI":"10.3389\/fpls.2012.00031","article-title":"Evolution of plant p-type ATPases","volume":"3","author":"Pedersen","year":"2012","journal-title":"Front. Plant Sci."},{"key":"10.1016\/j.plaphy.2020.11.051_bib22","doi-asserted-by":"crossref","first-page":"391","DOI":"10.1093\/jxb\/erv474","article-title":"Modulation of copper deficiency responses by diurnal and circadian rhythms in Arabidopsis thaliana","volume":"67","author":"Perea-Garcia","year":"2016","journal-title":"J. Exp. Bot."},{"key":"10.1016\/j.plaphy.2020.11.051_bib23","doi-asserted-by":"crossref","first-page":"1030","DOI":"10.1111\/nph.14244","article-title":"The copper microRNAs","volume":"213","author":"Pilon","year":"2017","journal-title":"New Phytol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib24","doi-asserted-by":"crossref","first-page":"601","DOI":"10.3389\/fpls.2016.00601","article-title":"Copper trafficking in plants and its implication on cell wall dynamics","volume":"7","author":"Printz","year":"2016","journal-title":"Front. Plant Sci."},{"key":"10.1016\/j.plaphy.2020.11.051_bib25","doi-asserted-by":"crossref","DOI":"10.1155\/2014\/476917","article-title":"Function and regulation of the plant COPT family of high-affinity copper transport proteins","volume":"2014","author":"Puig","year":"2014","journal-title":"Adv. Botany"},{"key":"10.1016\/j.plaphy.2020.11.051_bib26","doi-asserted-by":"crossref","first-page":"62","DOI":"10.1016\/S0304-3940(02)01423-4","article-title":"Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data","volume":"339","author":"Ramakers","year":"2003","journal-title":"Neurosci. Lett."},{"key":"10.1016\/j.plaphy.2020.11.051_bib27","doi-asserted-by":"crossref","first-page":"1397","DOI":"10.1046\/j.1365-3040.2000.00650.x","article-title":"Evaluation of instant light-response curves of chlorophyll fluorescence parameters obtained with a portable chlorophyll fluorometer on site in the field","volume":"23","author":"Rascher","year":"2000","journal-title":"Plant Cell Environ."},{"key":"10.1016\/j.plaphy.2020.11.051_bib28","doi-asserted-by":"crossref","first-page":"1300","DOI":"10.1104\/pp.111.183350","article-title":"Spatiotemporal analysis of copper homeostasis in Populus trichocarpa reveals an integrated molecular remodeling for a preferential allocation of copper to plastocyanin in the chloroplasts of developing leaves","volume":"157","author":"Ravet","year":"2011","journal-title":"Plant Physiol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib29","doi-asserted-by":"crossref","first-page":"20","DOI":"10.1186\/1471-2229-11-20","article-title":"ZINC-INDUCED FACILITATOR-LIKE family in plants: lineage-specific expansion in monocotyledons and conserved genomic and expression features among rice (Oryza sativa) paralogs","volume":"11","author":"Ricachenevsky","year":"2011","journal-title":"BMC Plant Biol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib30","doi-asserted-by":"crossref","first-page":"412","DOI":"10.3389\/fpls.2018.00412","article-title":"You shall not pass: root vacuoles as a symplastic checkpoint for metal translocation to shoots and possible application to grain nutritional quality","volume":"9","author":"Ricachenevsky","year":"2018","journal-title":"Front. Plant Sci."},{"key":"10.1016\/j.plaphy.2020.11.051_bib31","doi-asserted-by":"crossref","first-page":"15348","DOI":"10.1074\/jbc.M313321200","article-title":"The Arabidopsis copper transporter COPT1 functions in root elongation and pollen development","volume":"279","author":"Sancenon","year":"2004","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.plaphy.2020.11.051_bib32","first-page":"8","article-title":"Conserved Cu-MicroRNAs in Arabidopsis thaliana function in copper economy under deficiency","author":"Shahbaz","year":"2019","journal-title":"Plants"},{"key":"10.1016\/j.plaphy.2020.11.051_bib33","doi-asserted-by":"crossref","first-page":"1333","DOI":"10.1105\/tpc.011817","article-title":"PAA1, a P-type ATPase of Arabidopsis, functions in copper transport in chloroplasts","volume":"15","author":"Shikanai","year":"2003","journal-title":"Plant Cell"},{"key":"10.1016\/j.plaphy.2020.11.051_bib34","doi-asserted-by":"crossref","first-page":"491","DOI":"10.1016\/j.tplants.2005.08.008","article-title":"P(1B)-ATPases--an ancient family of transition metal pumps with diverse functions in plants","volume":"10","author":"Williams","year":"2005","journal-title":"Trends Plant Sci."},{"key":"10.1016\/j.plaphy.2020.11.051_bib35","doi-asserted-by":"crossref","first-page":"1090","DOI":"10.1039\/c3mt00086a","article-title":"Transition metals in plant photosynthesis","volume":"5","author":"Yruela","year":"2013","journal-title":"Metall : integrated biometal science"},{"key":"10.1016\/j.plaphy.2020.11.051_bib36","doi-asserted-by":"crossref","first-page":"3164","DOI":"10.1105\/tpc.110.078022","article-title":"The bacterial pathogen Xanthomonas oryzae overcomes rice defenses by regulating host copper redistribution","volume":"22","author":"Yuan","year":"2010","journal-title":"Plant Cell"},{"key":"10.1016\/j.plaphy.2020.11.051_bib37","doi-asserted-by":"crossref","first-page":"69","DOI":"10.1186\/1471-2229-11-69","article-title":"Molecular and functional analyses of COPT\/Ctr-type copper transporter-like gene family in rice","volume":"11","author":"Yuan","year":"2011","journal-title":"BMC Plant Biol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib38","doi-asserted-by":"crossref","first-page":"848","DOI":"10.1038\/nbt.2646","article-title":"Overexpression of microRNA OsmiR397 improves rice yield by increasing grain size and promoting panicle branching","volume":"31","author":"Zhang","year":"2013","journal-title":"Nat. Biotechnol."},{"key":"10.1016\/j.plaphy.2020.11.051_bib39","doi-asserted-by":"crossref","first-page":"5277","DOI":"10.1073\/pnas.1703752114","article-title":"Short tandem target mimic rice lines uncover functions of miRNAs in regulating important agronomic traits","volume":"114","author":"Zhang","year":"2017","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"10.1016\/j.plaphy.2020.11.051_bib40","doi-asserted-by":"crossref","first-page":"1175","DOI":"10.1104\/pp.17.01169","article-title":"MiR408 regulates grain yield and photosynthesis via a phytocyanin protein","volume":"175","author":"Zhang","year":"2017","journal-title":"Plant Physiol."}],"container-title":["Plant Physiology and Biochemistry"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0981942820306112?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0981942820306112?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,10,19]],"date-time":"2025-10-19T08:19:55Z","timestamp":1760861995000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0981942820306112"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021,1]]},"references-count":40,"alternative-id":["S0981942820306112"],"URL":"https:\/\/doi.org\/10.1016\/j.plaphy.2020.11.051","relation":{},"ISSN":["0981-9428"],"issn-type":[{"value":"0981-9428","type":"print"}],"subject":[],"published":{"date-parts":[[2021,1]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"The copper economy response is partially conserved in rice (Oryza sativa L.)","name":"articletitle","label":"Article Title"},{"value":"Plant Physiology and Biochemistry","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.plaphy.2020.11.051","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2020 Elsevier Masson SAS. All rights reserved.","name":"copyright","label":"Copyright"}]}}