{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,23]],"date-time":"2026-10-23T12:16:05Z","timestamp":1792757765008,"version":"4.5.0"},"reference-count":76,"publisher":"Elsevier BV","issue":"5","license":[{"start":{"date-parts":[[2024,5,1]],"date-time":"2024-05-01T00:00:00Z","timestamp":1714521600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2024,5,1]],"date-time":"2024-05-01T00:00:00Z","timestamp":1714521600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2024,3,2]],"date-time":"2024-03-02T00:00:00Z","timestamp":1709337600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100003624","name":"Ministry of Agriculture, Food and Rural Affairs","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100003624","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100011798","name":"Ministry of Agriculture and Rural Affairs of the People's Republic of China","doi-asserted-by":"publisher","award":["2023ZD04064"],"award-info":[{"award-number":["2023ZD04064"]}],"id":[{"id":"10.13039\/501100011798","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Poultry Science"],"published-print":{"date-parts":[[2024,5]]},"DOI":"10.1016\/j.psj.2024.103626","type":"journal-article","created":{"date-parts":[[2024,3,6]],"date-time":"2024-03-06T16:23:13Z","timestamp":1709742193000},"page":"103626","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":10,"title":["Assessment of selective breeding effects and selection signatures in Qingyuan partridge chicken and its strains"],"prefix":"10.1016","volume":"103","author":[{"given":"Shaofen","family":"Kong","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bolin","family":"Cai","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xiaojing","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zhen","family":"Zhou","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3782-0366","authenticated-orcid":false,"given":"Xiang","family":"Fang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xin","family":"Yang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Danfeng","family":"Cai","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xuehui","family":"Luo","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Suyin","family":"Guo","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3934-3820","authenticated-orcid":false,"given":"Qinghua","family":"Nie","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.psj.2024.103626_bib0001","doi-asserted-by":"crossref","first-page":"30","DOI":"10.1093\/humrep\/deab237","article-title":"Positive effects of amphiregulin on human oocyte maturation and its molecular drivers in patients with polycystic ovary syndrome","volume":"37","author":"Akin","year":"2021","journal-title":"Hum. Reprod."},{"key":"10.1016\/j.psj.2024.103626_bib0002","doi-asserted-by":"crossref","first-page":"1655","DOI":"10.1101\/gr.094052.109","article-title":"Fast model-based estimation of ancestry in unrelated individuals","volume":"19","author":"Alexander","year":"2009","journal-title":"Genome Res."},{"key":"10.1016\/j.psj.2024.103626_bib0003","doi-asserted-by":"crossref","first-page":"629","DOI":"10.1080\/00071668.2018.1523537","article-title":"Genetic diversity and population structure analysis of eight local chicken breeds of Southern Xinjiang","volume":"59","author":"Azimu","year":"2018","journal-title":"Br. Poult. Sci."},{"key":"10.1016\/j.psj.2024.103626_bib0004","doi-asserted-by":"crossref","first-page":"1017","DOI":"10.1111\/1755-0998.12424","article-title":"Exploring linkage disequilibrium","volume":"15","author":"Baird","year":"2015","journal-title":"Mol. Ecol. Resour."},{"key":"10.1016\/j.psj.2024.103626_bib0005","first-page":"571","article-title":"Predicting CpG islands and their relationship with genomic feature in cattle by hidden markov model algorithm","volume":"6","author":"Barazandeh","year":"2016","journal-title":"Iranian J. Appl. Anim. Sci."},{"key":"10.1016\/j.psj.2024.103626_bib0006","doi-asserted-by":"crossref","first-page":"487","DOI":"10.17221\/78\/2015-CJAS","article-title":"Genome-wide analysis of CpG islands in some livestock genomes and their relationship with genomic features","volume":"61","author":"Barazandeh","year":"2016","journal-title":"Czech J. Anim. Sci."},{"key":"10.1016\/j.psj.2024.103626_bib0007","doi-asserted-by":"crossref","first-page":"1103","DOI":"10.3390\/ani12091103","article-title":"Identification of candidate genes regulating carcass depth and hind leg circumference in simmental beef cattle using Illumina Bovine Beadchip and next-generation sequencing","volume":"12","author":"Bordbar","year":"2022","journal-title":"Animals"},{"key":"10.1016\/j.psj.2024.103626_bib0008","doi-asserted-by":"crossref","first-page":"512","DOI":"10.1016\/j.omtn.2020.12.003","article-title":"Long noncoding RNA SMUL suppresses SMURF2 production-mediated muscle atrophy via nonsense-mediated mRNA decay","volume":"23","author":"Cai","year":"2021","journal-title":"Mol. Ther. Nucleic. Acids."},{"key":"10.1016\/j.psj.2024.103626_bib0009","doi-asserted-by":"crossref","first-page":"154","DOI":"10.1038\/s41437-022-00589-z","article-title":"Population structure and hybridisation in a population of Hawaiian feral chickens","volume":"130","author":"Cerezo","year":"2023","journal-title":"Heredity (Edinb)"},{"key":"10.1016\/j.psj.2024.103626_bib0010","doi-asserted-by":"crossref","DOI":"10.1016\/j.gene.2020.145371","article-title":"Whole-genome resequencing reveals diversity and selective signals in Longlin goat","volume":"771","author":"Chen","year":"2021","journal-title":"Gene"},{"key":"10.1016\/j.psj.2024.103626_bib0011","doi-asserted-by":"crossref","first-page":"144","DOI":"10.1093\/bib\/bby112","article-title":"Dating admixture events is unsolved problem in multi-way admixed populations","volume":"21","author":"Chimusa","year":"2020","journal-title":"Brief. Bioinform."},{"key":"10.1016\/j.psj.2024.103626_bib0012","doi-asserted-by":"crossref","DOI":"10.1016\/j.ygeno.2022.110298","article-title":"Comparative genomics and selection analysis of Yeonsan Ogye black chicken with whole-genome sequencing","volume":"114","author":"Cho","year":"2022","journal-title":"Genomics"},{"key":"10.1016\/j.psj.2024.103626_bib0013","doi-asserted-by":"crossref","first-page":"858","DOI":"10.1038\/ng.3034","article-title":"Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle","volume":"46","author":"Daetwyler","year":"2014","journal-title":"Nat. Genet"},{"key":"10.1016\/j.psj.2024.103626_bib0014","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1080\/10495398.2016.1206555","article-title":"Identification of differentially expressed genes and pathways for myofiber characteristics in soleus muscles between chicken breeds differing in meat quality","volume":"28","author":"Du","year":"2017","journal-title":"Anim. Biotechnol."},{"key":"10.1016\/j.psj.2024.103626_bib0015","doi-asserted-by":"crossref","first-page":"896","DOI":"10.1631\/jzus.B1300163","article-title":"Meat quality traits of four Chinese indigenous chicken breeds and one commercial broiler stock","volume":"14","author":"Guan","year":"2013","journal-title":"J. Zhejiang. Univ. Sci. B"},{"key":"10.1016\/j.psj.2024.103626_bib0016","doi-asserted-by":"crossref","first-page":"45","DOI":"10.1016\/j.tig.2021.06.015","article-title":"Genome structural variation in human evolution","volume":"38","author":"Hollox","year":"2022","journal-title":"Trends. Genet."},{"key":"10.1016\/j.psj.2024.103626_bib0017","doi-asserted-by":"crossref","DOI":"10.1016\/j.animal.2021.100354","article-title":"Whole-genome resequencing reveals genetic structure and introgression in Pudong White pigs","volume":"15","author":"Huang","year":"2021","journal-title":"Animal."},{"key":"10.1016\/j.psj.2024.103626_bib0018","doi-asserted-by":"crossref","first-page":"316","DOI":"10.1186\/s12864-020-6736-4","article-title":"Genome-wide genetic structure and selection signatures for color in 10 traditional Chinese yellow-feathered chicken breeds","volume":"21","author":"Huang","year":"2020","journal-title":"BMC. Genomics."},{"key":"10.1016\/j.psj.2024.103626_bib0019","first-page":"217","article-title":"The effect of Cannabis seed on DLK1 gene expression in heart tissue of Kermani lambs","volume":"15","author":"Jafari Ahmadabadi","year":"2023","journal-title":"Agric. Biotechnol. J."},{"key":"10.1016\/j.psj.2024.103626_bib0020","doi-asserted-by":"crossref","DOI":"10.3389\/fgene.2023.1284554","article-title":"Transcriptome-wide m6A methylation profiling of Wuhua yellow-feathered chicken ovary revealed regulatory pathways underlying sexual maturation and low egg-laying performance","volume":"14","author":"Jia","year":"2023","journal-title":"Front. Genet."},{"key":"10.1016\/j.psj.2024.103626_bib0021","doi-asserted-by":"crossref","first-page":"556","DOI":"10.1186\/s12859-019-3164-z","article-title":"Optimal sequencing depth design for whole genome re-sequencing in pigs","volume":"20","author":"Jiang","year":"2019","journal-title":"BMC. Bioinformatics."},{"key":"10.1016\/j.psj.2024.103626_bib0022","doi-asserted-by":"crossref","first-page":"158","DOI":"10.1111\/jbg.12739","article-title":"Estimation of genetic parameters for important traits using a multi-trait model in late-feathering Qingyuan partridge hens in China","volume":"140","author":"Kang","year":"2023","journal-title":"J. Anim. Breed. Genet."},{"key":"10.1016\/j.psj.2024.103626_bib0023","doi-asserted-by":"crossref","first-page":"1031","DOI":"10.1111\/1755-0998.12369","article-title":"Linkage disequilibrium network analysis (LDna) gives a global view of chromosomal inversions, local adaptation and geographic structure","volume":"15","author":"Kemppainen","year":"2015","journal-title":"Mol. Ecol. Resour."},{"key":"10.1016\/j.psj.2024.103626_bib0024","first-page":"113","article-title":"Cloning and nucleotide sequencing of the complete matrix protein of Newcastle disease virus subgenotype VII. 1.1 prevalence in broiler flocks of northeastern Iran","volume":"17","author":"Khabiri","year":"2022","journal-title":"Modern Genetic J."},{"key":"10.1016\/j.psj.2024.103626_bib0025","first-page":"221","article-title":"Introduction of a Newcastle disease virus challenge strain (sub-genotype VII. 1.1) isolated in Iran","volume":"14","author":"Khabiri","year":"2023","journal-title":"Vet. Res. Forum"},{"key":"10.1016\/j.psj.2024.103626_bib0026","doi-asserted-by":"crossref","first-page":"4017","DOI":"10.7150\/thno.41502","article-title":"JNK suppresses melanogenesis by interfering with CREB-regulated transcription coactivator 3-dependent MITF expression","volume":"10","author":"Kim","year":"2020","journal-title":"Theranostics."},{"key":"10.1016\/j.psj.2024.103626_bib0027","doi-asserted-by":"crossref","first-page":"576","DOI":"10.5713\/ab.23.0246","article-title":"Genetic factors influencing milk and fat yields in tropically adapted dairy cattle: insights from QTL analysis and gene associations","volume":"37","author":"Laodiim","year":"2023","journal-title":"Anim. Biosci."},{"key":"10.1016\/j.psj.2024.103626_bib0028","doi-asserted-by":"crossref","first-page":"6139","DOI":"10.1073\/pnas.1323964111","article-title":"Current perspectives and the future of domestication studies","volume":"111","author":"Larson","year":"2014","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.psj.2024.103626_bib0029","doi-asserted-by":"crossref","first-page":"66","DOI":"10.1038\/nature07485","article-title":"DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome","volume":"456","author":"Ley","year":"2008","journal-title":"Nature"},{"key":"10.1016\/j.psj.2024.103626_bib0030","doi-asserted-by":"crossref","first-page":"263","DOI":"10.1186\/s12864-019-5622-4","article-title":"Population genomics identifies patterns of genetic diversity and selection in chicken","volume":"20","author":"Li","year":"2019","journal-title":"BMC. Genomics."},{"key":"10.1016\/j.psj.2024.103626_bib0031","doi-asserted-by":"crossref","first-page":"52","DOI":"10.1186\/s40104-022-00710-6","article-title":"The m6A methylation regulates gonadal sex differentiation in chicken embryo","volume":"13","author":"Li","year":"2022","journal-title":"J. Anim. Sci. Biotechnol."},{"key":"10.1016\/j.psj.2024.103626_bib0033","doi-asserted-by":"crossref","first-page":"2302","DOI":"10.3390\/foods12122302","article-title":"Dietary supplementation with rutin alters meat quality, fatty acid profile, antioxidant capacity, and expression levels of genes associated with lipid metabolism in breast muscle of Qingyuan partridge chickens","volume":"12","author":"Li","year":"2023","journal-title":"Foods."},{"key":"10.1016\/j.psj.2024.103626_bib0034","doi-asserted-by":"crossref","first-page":"837","DOI":"10.1016\/S0092-8674(02)00685-2","article-title":"Control of beta-catenin phosphorylation\/degradation by a dual-kinase mechanism","volume":"108","author":"Liu","year":"2002","journal-title":"Cell"},{"key":"10.1016\/j.psj.2024.103626_bib0035","doi-asserted-by":"crossref","first-page":"14532","DOI":"10.1038\/s41598-020-71421-z","article-title":"Genome diversity of Chinese indigenous chicken and the selective signatures in Chinese gamecock chicken","volume":"10","author":"Luo","year":"2020","journal-title":"Sci. Rep."},{"key":"10.1016\/j.psj.2024.103626_bib0036","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0133597","article-title":"Network analysis for the identification of differentially expressed hub genes using Myogenin Knock-down muscle satellite cells","volume":"10","author":"Malik","year":"2015","journal-title":"PLoS. One"},{"key":"10.1016\/j.psj.2024.103626_bib0037","first-page":"669","article-title":"Dlk1 gene expression in different tissues of lamb","volume":"10","author":"Masoudzadeh","year":"2020","journal-title":"Iranian J Appl. Anim. Sci."},{"key":"10.1016\/j.psj.2024.103626_bib0038","article-title":"H3K4 methylation promotes expression of mitochondrial dynamics regulators to ensure oocyte quality in mice","volume":"10","author":"Mei","year":"2023","journal-title":"Adv. Sci. (Weinh)"},{"key":"10.1016\/j.psj.2024.103626_bib0039","doi-asserted-by":"crossref","first-page":"1","DOI":"10.4236\/ojas.2016.61001","article-title":"Association between UCP gene polymorphisms and growth, brreeding value of growth and reproductive traits in Mazandaran indigenous chicken","volume":"6","author":"Moazeni","year":"2016","journal-title":"Open J. Anim. Sci"},{"key":"10.1016\/j.psj.2024.103626_bib0040","first-page":"51","article-title":"Association of the melanocortin-3(MC3R) receptor gene with growth and reproductive traits in Mazandaran indigenous chicken","volume":"4","author":"Moazeni","year":"2016","journal-title":"J. Livest. Sci. Technol"},{"key":"10.1016\/j.psj.2024.103626_bib0041","first-page":"1","article-title":"Signature selection analysis reveals candidate genes associated with production traits in Iranian sheep breeds","volume":"17","author":"Mohamadipoor","year":"2021","journal-title":"BMC. Vet. Res."},{"key":"10.1016\/j.psj.2024.103626_bib0042","doi-asserted-by":"crossref","first-page":"e08542","DOI":"10.1016\/j.heliyon.2021.e08542","article-title":"Fennel (Foeniculum vulgare) seed powder increases delta-like non-canonical notch ligand 1 gene expression in testis, liver, and humeral muscle tissues of growing lambs","volume":"7","author":"Mohammadabadi","year":"2021","journal-title":"Heliyon."},{"key":"10.1016\/j.psj.2024.103626_bib0043","first-page":"239","article-title":"The effect of fennel (Foeniculum vulgare) on insulin-like growth factor 1 gene expression in the rumen tissue of Kermani sheep","volume":"15","author":"Mohammadabadi","year":"2023","journal-title":"Agric. Biotechnol. J."},{"key":"10.1016\/j.psj.2024.103626_bib0044","doi-asserted-by":"crossref","first-page":"505","DOI":"10.1134\/S1022795410040198","article-title":"Genetic variability in three native Iranian chicken populations of the Khorasan province based on microsatellite markers","volume":"46","author":"Mohammadabadi","year":"2010","journal-title":"Russ. J. Genet."},{"key":"10.1016\/j.psj.2024.103626_bib0045","first-page":"125","article-title":"The effect of TGFb3 gene on phenotypic and breeding values of body weight traits in Fars native fowls","volume":"5","author":"Mohammadifar","year":"2014","journal-title":"J. Agric. Biotech."},{"key":"10.1016\/j.psj.2024.103626_bib0046","first-page":"85","article-title":"Melanocortin-3 receptor (mc3r) gene association with growth and egg production traits in Fars indigenous chicken","volume":"47","author":"Mohammadifar","year":"2018","journal-title":"Malays. Appl. Biol."},{"key":"10.1016\/j.psj.2024.103626_bib0048","doi-asserted-by":"crossref","first-page":"3471","DOI":"10.3390\/ani12243471","article-title":"Identification of key genes and biological pathways associated with skeletal muscle maturation and hypertrophy in Bos taurus, Ovis aries, and Sus scrofa","volume":"12","author":"Mohammadinejad","year":"2022","journal-title":"Animals"},{"key":"10.1016\/j.psj.2024.103626_bib0050","doi-asserted-by":"crossref","first-page":"3121","DOI":"10.1016\/j.psj.2020.01.017","article-title":"Dietary betaine improves egg-laying rate in hens through hypomethylation and glucocorticoid receptor-mediated activation of hepatic lipogenesis-related genes","volume":"99","author":"Omer","year":"2020","journal-title":"Poult. Sci."},{"key":"10.1016\/j.psj.2024.103626_bib0051","doi-asserted-by":"crossref","first-page":"2","DOI":"10.1186\/s40104-017-0218-9","article-title":"Dietary betaine activates hepatic VTGII expression in laying hens associated with hypomethylation of GR gene promoter and enhanced GR expression","volume":"9","author":"Omer","year":"2018","journal-title":"J. Anim. Sci. Biotechnol."},{"key":"10.1016\/j.psj.2024.103626_bib0052","doi-asserted-by":"crossref","first-page":"133","DOI":"10.1016\/j.livsci.2014.05.003","article-title":"Mapping signatures of positive selection in the genome of livestock","volume":"166","author":"Qanbari","year":"2014","journal-title":"Livest. Sci."},{"key":"10.1016\/j.psj.2024.103626_bib0053","doi-asserted-by":"crossref","first-page":"5868","DOI":"10.3390\/ijms24065868","article-title":"Systematic selection signature analysis of chinese gamecocks based on genomic and transcriptomic data","volume":"24","author":"Ren","year":"2023","journal-title":"Int. J. Mol. Sci."},{"key":"10.1016\/j.psj.2024.103626_bib0054","doi-asserted-by":"crossref","first-page":"345","DOI":"10.2337\/db10-0933","article-title":"Genetic predisposition to long-term nondiabetic deteriorations in glucose homeostasis: ten-year follow-up of the GLACIER study","volume":"60","author":"Renstrom","year":"2011","journal-title":"Diabetes"},{"key":"10.1016\/j.psj.2024.103626_bib0055","doi-asserted-by":"crossref","first-page":"14","DOI":"10.3390\/ani13010014","article-title":"An origanum majorana leaf diet influences myogenin gene expression, performance, and carcass characteristics in lambs","volume":"13","author":"Safaei","year":"2022","journal-title":"Animals"},{"key":"10.1016\/j.psj.2024.103626_bib0056","doi-asserted-by":"crossref","DOI":"10.14218\/GE.2023.00020","article-title":"Role of fennel (Foeniculum vulgare) seed powder in increasing testosterone and igf1 gene expression in the testis of lamb","author":"Safaei","year":"2023","journal-title":"Gene Expr"},{"key":"10.1016\/j.psj.2024.103626_bib0057","doi-asserted-by":"crossref","first-page":"2776","DOI":"10.3382\/ps.2012-02841","article-title":"Comparison of carcass yields and meat quality between Baicheng-you chickens and arbor acres broilers","volume":"92","author":"Sarsenbek","year":"2013","journal-title":"Poult. Sci."},{"key":"10.1016\/j.psj.2024.103626_bib0058","doi-asserted-by":"crossref","first-page":"1211","DOI":"10.1111\/jth.13332","article-title":"Plasma levels of vitamin K and the risk of ischemic heart disease: a Mendelian randomization study","volume":"14","author":"Schooling","year":"2016","journal-title":"J. Thromb. Haemost."},{"key":"10.1016\/j.psj.2024.103626_bib0059","doi-asserted-by":"crossref","first-page":"691","DOI":"10.1042\/EBC20190043","article-title":"The role and mechanisms of DNA methylation in the oocyte","volume":"63","author":"Sendzikaite","year":"2019","journal-title":"Essays Biochem."},{"key":"10.1016\/j.psj.2024.103626_bib0049","first-page":"4368","article-title":"Typing of clostridium perfringens isolated from broiler chickens using multiplex PCR","volume":"14","author":"Shahdadnejad","year":"2016","journal-title":"Genetics Third Millennium"},{"key":"10.1016\/j.psj.2024.103626_bib0060","first-page":"21","article-title":"Effect of fennel (foeniculum vulgare) seed powder consumption on insulin-like growth factor 1 gene expression in the liver tissue of growing lambs","volume":"21","author":"Shahsavari","year":"2022","journal-title":"Gene Expr."},{"key":"10.1016\/j.psj.2024.103626_bib0061","doi-asserted-by":"crossref","DOI":"10.1155\/2013\/310948","article-title":"PPAR gamma regulates genes involved in triacylglycerol synthesis and secretion in mammary gland epithelial cells of dairy goats","volume":"2013","author":"Shi","year":"2013","journal-title":"PPAR Res."},{"key":"10.1016\/j.psj.2024.103626_bib0062","doi-asserted-by":"crossref","first-page":"13","DOI":"10.1016\/j.jare.2022.07.005","article-title":"Whole genome analyses reveal novel genes associated with chicken adaptation to tropical and frigid environments","volume":"47","author":"Shi","year":"2023","journal-title":"J. Adv. Res."},{"key":"10.1016\/j.psj.2024.103626_bib0063","first-page":"21","article-title":"The expression of MYH7 gene in femur, humeral muscle and back muscle tissues of fattening lambs of the Kermani breed","volume":"15","author":"Shokri","year":"2023","journal-title":"Agric. Biotechnol. J."},{"key":"10.1016\/j.psj.2024.103626_bib0064","doi-asserted-by":"crossref","first-page":"e677","DOI":"10.1002\/cpz1.677","article-title":"Overview of admixture mapping","volume":"3","author":"Shriner","year":"2023","journal-title":"Curr. Protoc."},{"key":"10.1016\/j.psj.2024.103626_bib0065","doi-asserted-by":"crossref","first-page":"121","DOI":"10.1038\/nrg3642","article-title":"Sequencing depth and coverage: key considerations in genomic analyses","volume":"15","author":"Sims","year":"2014","journal-title":"Nat. Rev. Genet."},{"key":"10.1016\/j.psj.2024.103626_bib0066","doi-asserted-by":"crossref","first-page":"674","DOI":"10.1186\/s12864-020-07095-8","article-title":"Selection signatures of Fuzhong Buffalo based on whole-genome sequences","volume":"21","author":"Sun","year":"2020","journal-title":"BMC. Genomics."},{"key":"10.1016\/j.psj.2024.103626_bib0067","doi-asserted-by":"crossref","first-page":"208","DOI":"10.1253\/circj.CJ-08-1041","article-title":"Phosphorylation of myosin regulatory light chain by myosin light chain kinase, and muscle contraction","volume":"73","author":"Takashima","year":"2009","journal-title":"Circ. J."},{"key":"10.1016\/j.psj.2024.103626_bib0068","doi-asserted-by":"crossref","first-page":"125","DOI":"10.1093\/hmg\/9.1.125","article-title":"Ser298 of MITF, a mutation site in Waardenburg syndrome type 2, is a phosphorylation site with functional significance","volume":"9","author":"Takeda","year":"2000","journal-title":"Hum. Mol. Genet."},{"key":"10.1016\/j.psj.2024.103626_bib0069","doi-asserted-by":"crossref","first-page":"328","DOI":"10.1111\/age.13293","article-title":"Genome-wide re-sequencing data reveals the genetic diversity and population structure of Wenchang chicken in China","volume":"54","author":"Tian","year":"2023","journal-title":"Anim. Genet."},{"key":"10.1016\/j.psj.2024.103626_bib0070","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pgen.1005694","article-title":"Transcript expression data from human islets links regulatory signals from genome-wide association studies for type 2 diabetes and glycemic traits to their downstream effectors","volume":"11","author":"van de Bunt","year":"2015","journal-title":"PLoS. Genet."},{"key":"10.1016\/j.psj.2024.103626_bib0071","doi-asserted-by":"crossref","first-page":"428","DOI":"10.1038\/jhg.2011.34","article-title":"Factors affecting the effective number of tests in genetic association studies: a comparative study of three PCA-based methods","volume":"56","author":"Wen","year":"2011","journal-title":"J. Hum. Genet."},{"key":"10.1016\/j.psj.2024.103626_bib0072","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0241137","article-title":"Genomic variations and signatures of selection in Wuhua yellow chicken","volume":"15","author":"Weng","year":"2020","journal-title":"PLoS. One"},{"key":"10.1016\/j.psj.2024.103626_bib0073","doi-asserted-by":"crossref","first-page":"12925","DOI":"10.1038\/s41598-019-49548-5","article-title":"Comparative adipose transcriptome analysis digs out genes related to fat deposition in two pig breeds","volume":"9","author":"Xing","year":"2019","journal-title":"Sci. Rep."},{"key":"10.1016\/j.psj.2024.103626_bib0074","doi-asserted-by":"crossref","DOI":"10.1016\/j.psj.2023.102721","article-title":"A genome-wide scan to identify signatures of selection in Lueyang black -bone chicken","volume":"102","author":"Xue","year":"2023","journal-title":"Poult. Sci."},{"key":"10.1016\/j.psj.2024.103626_bib0075","doi-asserted-by":"crossref","first-page":"646","DOI":"10.7150\/thno.30276","article-title":"Nuclear entry of CRTC1 as druggable target of acquired pigmentary disorder","volume":"9","author":"Yun","year":"2019","journal-title":"Theranostics."},{"key":"10.1016\/j.psj.2024.103626_bib0076","doi-asserted-by":"crossref","DOI":"10.3389\/fgene.2021.802857","article-title":"Differentially expressed lncRNAs related to the development of abdominal fat in Gushi Chickens and their interaction regulatory network","volume":"12","author":"Zhai","year":"2021","journal-title":"Front. Genet."},{"key":"10.1016\/j.psj.2024.103626_bib0077","doi-asserted-by":"crossref","first-page":"1786","DOI":"10.1093\/bioinformatics\/bty875","article-title":"PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format files","volume":"35","author":"Zhang","year":"2019","journal-title":"Bioinformatics."},{"key":"10.1016\/j.psj.2024.103626_bib0078","article-title":"The functional SNPs in the 5\u2032 regulatory region of the porcine PPARD gene have significant association with fat deposition traits","volume":"10","author":"Zhang","year":"2015","journal-title":"PLoS. One"}],"container-title":["Poultry Science"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0032579124002050?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0032579124002050?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2024,4,28]],"date-time":"2024-04-28T00:02:35Z","timestamp":1714262555000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0032579124002050"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,5]]},"references-count":76,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2024,5]]}},"alternative-id":["S0032579124002050"],"URL":"https:\/\/doi.org\/10.1016\/j.psj.2024.103626","relation":{},"ISSN":["0032-5791"],"issn-type":[{"value":"0032-5791","type":"print"}],"subject":[],"published":{"date-parts":[[2024,5]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Assessment of selective breeding effects and selection signatures in Qingyuan partridge chicken and its strains","name":"articletitle","label":"Article Title"},{"value":"Poultry Science","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.psj.2024.103626","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2024 The Authors. Published by Elsevier Inc. on behalf of Poultry Science Association Inc.","name":"copyright","label":"Copyright"}],"article-number":"103626"}}