{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T03:13:06Z","timestamp":1788232386679,"version":"build-2803163510"},"reference-count":43,"publisher":"Elsevier BV","issue":"7","license":[{"start":{"date-parts":[[2025,9,1]],"date-time":"2025-09-01T00:00:00Z","timestamp":1756684800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,9,1]],"date-time":"2025-09-01T00:00:00Z","timestamp":1756684800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"vor","delay-in-days":365,"URL":"http:\/\/www.elsevier.com\/open-access\/userlicense\/1.0\/"}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Research in Microbiology"],"published-print":{"date-parts":[[2025,9]]},"DOI":"10.1016\/j.resmic.2025.104306","type":"journal-article","created":{"date-parts":[[2025,7,15]],"date-time":"2025-07-15T15:45:38Z","timestamp":1752594338000},"page":"104306","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":2,"title":["Multi-drug resistance and diversity of mobile genetic elements in Escherichia coli isolated from migratory bird in Poyang Lake"],"prefix":"10.1016","volume":"176","author":[{"given":"Haixin","family":"Deng","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Huiping","family":"Liang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Qinghua","family":"Zeng","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Peng","family":"Huang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hui","family":"Yan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Huabin","family":"Cao","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Huansheng","family":"Wu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.resmic.2025.104306_bib1","doi-asserted-by":"crossref","DOI":"10.1155\/2018\/5327450","article-title":"Antibiotics resistance genes screening and comparative genomics analysis of commensal Escherichia coli isolated from poultry farms between China and Sudan","author":"Abdelgader","year":"2018","journal-title":"BioMed Res Int"},{"key":"10.1016\/j.resmic.2025.104306_bib2","doi-asserted-by":"crossref","unstructured":"Tenaillon O, Skurnik D, Picard B, Denamur E. The population genetics of commensal Escherichia coli. Nat Rev Microbiol, 8(3): 207-217.https:\/\/doi.org\/10.1038\/nrmicro2298.","DOI":"10.1038\/nrmicro2298"},{"key":"10.1016\/j.resmic.2025.104306_bib3","doi-asserted-by":"crossref","unstructured":"Blount ZD. The unexhausted potential of E. coli. eLife, 4.https:\/\/doi.org\/10.7554\/eLife.05826.","DOI":"10.7554\/eLife.05826"},{"key":"10.1016\/j.resmic.2025.104306_bib4","doi-asserted-by":"crossref","unstructured":"Nicolas-Chanoine MH, Bertrand X, Madec JY. Escherichia coli ST131, an intriguing clonal group. Clin Microbiol Rev, 27(3): 543-574.https:\/\/doi.org\/10.1128\/cmr.00125-13.","DOI":"10.1128\/CMR.00125-13"},{"key":"10.1016\/j.resmic.2025.104306_bib5","doi-asserted-by":"crossref","unstructured":"Li W, Ma J, Sun X, Liu M, Wang H. Antimicrobial resistance and molecular characterization of gene cassettes from class 1 integrons in Escherichia coli strains. Microb Drug Resist, 28(4): 413-418.https:\/\/doi.org\/10.1089\/mdr.2021.0172.","DOI":"10.1089\/mdr.2021.0172"},{"key":"10.1016\/j.resmic.2025.104306_bib6","doi-asserted-by":"crossref","unstructured":"Kelly D, King T, Aminov R. Importance of microbial colonization of the gut in early life to the development of immunity. Mutat Res, 622(1\u20132): 58-69.https:\/\/doi.org\/10.1016\/j.mrfmmm.2007.03.011.","DOI":"10.1016\/j.mrfmmm.2007.03.011"},{"key":"10.1016\/j.resmic.2025.104306_bib7","doi-asserted-by":"crossref","unstructured":"Robins-Browne RM, Holt KE, Ingle DJ, Hocking DM, Yang J, Tauschek M. Are Escherichia coli pathotypes still relevant in the era of whole-genome sequencing? Front Cell Infect Microbiol, 6: 141.https:\/\/doi.org\/10.3389\/fcimb.2016.00141.","DOI":"10.3389\/fcimb.2016.00141"},{"key":"10.1016\/j.resmic.2025.104306_bib8","doi-asserted-by":"crossref","unstructured":"Poirel L, Madec JY, Lupo A, Schink AK, Kieffer N, Nordmann P, et al. Antimicrobial resistance in Escherichia coli. Microbiol Spectr, 6(4).https:\/\/doi.org\/10.1128\/microbiolspec.ARBA-0026-2017.","DOI":"10.1128\/microbiolspec.ARBA-0026-2017"},{"key":"10.1016\/j.resmic.2025.104306_bib9","doi-asserted-by":"crossref","unstructured":"Liu CM, Aziz M, Park DE, Wu Z, Stegger M, Li M, et al. Using source-associated mobile genetic elements to identify zoonotic extraintestinal E. coli infections. One health (Amsterdam, Netherlands), 16: 100518.https:\/\/doi.org\/10.1016\/j.onehlt.2023.100518.","DOI":"10.1016\/j.onehlt.2023.100518"},{"key":"10.1016\/j.resmic.2025.104306_bib10","doi-asserted-by":"crossref","unstructured":"Song H, Yi S, Kim WH, Guk JH, Ha M, Kwak I, et al. Environmental perturbations during the rehabilitation of wild migratory birds induce gut microbiome alteration and antibiotic resistance acquisition. Microbiol Spectr, 10(4): e0116322.https:\/\/doi.org\/10.1128\/spectrum.01163-22.","DOI":"10.1128\/spectrum.01163-22"},{"key":"10.1016\/j.resmic.2025.104306_bib11","doi-asserted-by":"crossref","unstructured":"You Q, Yang W, Jian M, Hu Q. A comparison of metric scoring and health status classification methods to evaluate benthic macroinvertebrate-based index of biotic integrity performance in Poyang Lake wetland. Sci Total Environ, 761: 144112.https:\/\/doi.org\/10.1016\/j.scitotenv.2020.144112.","DOI":"10.1016\/j.scitotenv.2020.144112"},{"key":"10.1016\/j.resmic.2025.104306_bib12","doi-asserted-by":"crossref","unstructured":"Yao X, Cao Y, Zheng G, Devlin AT, Li X, Li M, et al. Ecological adaptability and population growth tolerance characteristics of Carex cinerascens in response to water level changes in Poyang Lake, China. Sci Rep, 11(1): 4887.https:\/\/doi.org\/10.1038\/s41598-021-84282-x.","DOI":"10.1038\/s41598-021-84282-x"},{"key":"10.1016\/j.resmic.2025.104306_bib13","doi-asserted-by":"crossref","unstructured":"Zhang D, Liao Q, Zhang L, Wang D, Luo L, Chen Y, et al. Occurrence and spatial distributions of microcystins in Poyang Lake, the largest freshwater lake in China. Ecotoxicology (London, England), 24(1): 19-28.https:\/\/doi.org\/10.1007\/s10646-014-1349-9.","DOI":"10.1007\/s10646-014-1349-9"},{"key":"10.1016\/j.resmic.2025.104306_bib14","doi-asserted-by":"crossref","unstructured":"Li B, Yang G, Wan R. Multidecadal water quality deterioration in the largest freshwater lake in China (Poyang Lake): implications on eutrophication management. Environ Pollut (Barking, Essex : 1987), 260: 114033.https:\/\/doi.org\/10.1016\/j.envpol.2020.114033.","DOI":"10.1016\/j.envpol.2020.114033"},{"key":"10.1016\/j.resmic.2025.104306_bib15","doi-asserted-by":"crossref","unstructured":"Xu J, Wang X, Liu J, Xiong L, Xu L, Hu C. The influence of water regime on cadmium uptake by Artemisia: a dominant vegetation in Poyang Lake wetland. J Environ Manag, 297: 113258.https:\/\/doi.org\/10.1016\/j.jenvman.2021.113258.","DOI":"10.1016\/j.jenvman.2021.113258"},{"key":"10.1016\/j.resmic.2025.104306_bib16","doi-asserted-by":"crossref","unstructured":"Zhang S, Chen S, Abbas M, Wang M, Jia R, Chen S, et al. High incidence of multi-drug resistance and heterogeneity of mobile genetic elements in Escherichia coli isolates from diseased ducks in Sichuan province of China. Ecotoxicol Environ Saf, 222: 112475.https:\/\/doi.org\/10.1016\/j.ecoenv.2021.112475.","DOI":"10.1016\/j.ecoenv.2021.112475"},{"key":"10.1016\/j.resmic.2025.104306_bib17","doi-asserted-by":"crossref","unstructured":"Yacoub T, Rima M, Karam M, Fajloun J. Antimicrobials from venomous animals: an overview. Molecules (Basel, Switzerland), 25(10).https:\/\/doi.org\/10.3390\/molecules25102402.","DOI":"10.3390\/molecules25102402"},{"key":"10.1016\/j.resmic.2025.104306_bib18","doi-asserted-by":"crossref","unstructured":"Liang X, Guan F, Chen B, Luo P, Guo C, Wu G, et al. Spatial and seasonal variations of antibiotic resistance genes and antibiotics in the surface waters of Poyang Lake in China. Ecotoxicol Environ Saf, 196: 110543.https:\/\/doi.org\/10.1016\/j.ecoenv.2020.110543.","DOI":"10.1016\/j.ecoenv.2020.110543"},{"key":"10.1016\/j.resmic.2025.104306_bib19","doi-asserted-by":"crossref","unstructured":"Musa L, Stefanetti V, Casagrande Proietti P, Grilli G, Gobbi M, Toppi V, et al. Antimicrobial susceptibility of commensal E. coli isolated from wild birds in Umbria (Central Italy). Animals : An Apen Access J MDPI, 13(11).https:\/\/doi.org\/10.3390\/ani13111776.","DOI":"10.3390\/ani13111776"},{"key":"10.1016\/j.resmic.2025.104306_bib20","doi-asserted-by":"crossref","unstructured":"Yuan Y, Liang B, Jiang BW, Zhu LW, Wang TC, Li YG, et al. Migratory wild birds carrying multidrug-resistant Escherichia coli as potential transmitters of antimicrobial resistance in China. PLoS One, 16(12): e0261444.https:\/\/doi.org\/10.1371\/journal.pone.0261444.","DOI":"10.1371\/journal.pone.0261444"},{"key":"10.1016\/j.resmic.2025.104306_bib21","doi-asserted-by":"crossref","unstructured":"Reybroeck W, Daeseleire E, De Brabander HF, Herman L. Antimicrobials in beekeeping. Vet Microbiol, 158(1\u20132): 1-11.https:\/\/doi.org\/10.1016\/j.vetmic.2012.01.012.","DOI":"10.1016\/j.vetmic.2012.01.012"},{"key":"10.1016\/j.resmic.2025.104306_bib22","doi-asserted-by":"crossref","unstructured":"Lee HJ, Woo YK, Choi BK, Jeong OM, Kim JH, Kim DW, et al. High prevalence of a gene cluster conferring resistance to streptomycin, sulfonamide, and tetracycline in Escherichia coli isolated from indigenous wild birds. J Gen Appl Microbiol, 67(2): 81-84.https:\/\/doi.org\/10.2323\/jgam.2020.06.003.","DOI":"10.2323\/jgam.2020.06.003"},{"key":"10.1016\/j.resmic.2025.104306_bib23","doi-asserted-by":"crossref","unstructured":"Ahlstrom CA, Bonnedahl J, Woksepp H, Hernandez J, Olsen B, Ramey AM. Acquisition and dissemination of cephalosporin-resistant E. coli in migratory birds sampled at an Alaska landfill as inferred through genomic analysis. Sci Rep, 8(1): 7361.https:\/\/doi.org\/10.1038\/s41598-018-25474-w.","DOI":"10.1038\/s41598-018-25474-w"},{"key":"10.1016\/j.resmic.2025.104306_bib24","doi-asserted-by":"crossref","unstructured":"Croxen MA, Finlay BB. Molecular mechanisms of Escherichia coli pathogenicity. Nat Rev Microbiol, 8(1): 26-38.https:\/\/doi.org\/10.1038\/nrmicro2265.","DOI":"10.1038\/nrmicro2265"},{"key":"10.1016\/j.resmic.2025.104306_bib25","doi-asserted-by":"crossref","unstructured":"Zhu DM, Ding Q, Li PH, Wang YL, Li YZ, Yu Li X, et al. Antimicrobial resistance in E. coli of animal origin and discovery of a novel ICE mobile element in Northeast China. BMC Vet Res, 19(1): 255.https:\/\/doi.org\/10.1186\/s12917-023-03828-5.","DOI":"10.1186\/s12917-023-03828-5"},{"key":"10.1016\/j.resmic.2025.104306_bib26","doi-asserted-by":"crossref","unstructured":"Mullany P, Allan E, Roberts AP. Mobile genetic elements in Clostridium difficile and their role in genome function. Res Microbiol, 166(4): 361-367.https:\/\/doi.org\/10.1016\/j.resmic.2014.12.005.","DOI":"10.1016\/j.resmic.2014.12.005"},{"key":"10.1016\/j.resmic.2025.104306_bib27","doi-asserted-by":"crossref","unstructured":"Goodman RN, Tansirichaiya S, Brouwer MSM, Roberts AP. Intracellular transposition of Mobile genetic elements associated with the Colistin resistance gene mcr-1. Microbiol Spectr, 11(1): e0327822.https:\/\/doi.org\/10.1128\/spectrum.03278-22.","DOI":"10.1128\/spectrum.03278-22"},{"key":"10.1016\/j.resmic.2025.104306_bib28","doi-asserted-by":"crossref","unstructured":"Partridge SR, Kwong SM, Firth N, Jensen SO. Mobile genetic elements associated with antimicrobial resistance. Clin Microbiol Rev, 31(4).https:\/\/doi.org\/10.1128\/cmr.00088-17.","DOI":"10.1128\/CMR.00088-17"},{"key":"10.1016\/j.resmic.2025.104306_bib29","doi-asserted-by":"crossref","unstructured":"Awad A, Arafat N, Elhadidy M. Genetic elements associated with antimicrobial resistance among avian pathogenic Escherichia coli. Ann Clin Microbiol Antimicrob, 15(1): 59.https:\/\/doi.org\/10.1186\/s12941-016-0174-9.","DOI":"10.1186\/s12941-016-0174-9"},{"key":"10.1016\/j.resmic.2025.104306_bib30","doi-asserted-by":"crossref","unstructured":"Poey ME, Lavi\u00f1a M. Horizontal transfer of class 1 integrons from uropathogenic Escherichia coli to E. coli K12. Microb Pathog, 117: 16-22.https:\/\/doi.org\/10.1016\/j.micpath.2018.02.006.","DOI":"10.1016\/j.micpath.2018.02.006"},{"key":"10.1016\/j.resmic.2025.104306_bib31","doi-asserted-by":"crossref","unstructured":"Malachowa N, DeLeo FR. Mobile genetic elements of Staphylococcus aureus. Cell Mol Life Sci : CMLS, 67(18): 3057-3071.https:\/\/doi.org\/10.1007\/s00018-010-0389-4.","DOI":"10.1007\/s00018-010-0389-4"},{"key":"10.1016\/j.resmic.2025.104306_bib32","doi-asserted-by":"crossref","unstructured":"Cheng P, Yang Y, Li F, Li X, Liu H, Fazilani SA, et al. The prevalence and mechanism of fluoroquinolone resistance in Escherichia coli isolated from swine farms in China. BMC Vet Res, 16(1): 258.https:\/\/doi.org\/10.1186\/s12917-020-02483-4.","DOI":"10.1186\/s12917-020-02483-4"},{"key":"10.1016\/j.resmic.2025.104306_bib33","doi-asserted-by":"crossref","unstructured":"Kim SY, Kuppusamy S, Kim JH, Yoon YE, Kim KR, Lee YB. Occurrence and diversity of tetracycline resistance genes in the agricultural soils of South Korea. Environ Sci Pollut Res Int, 23(21): 22190-22196.https:\/\/doi.org\/10.1007\/s11356-016-7574-4.","DOI":"10.1007\/s11356-016-7574-4"},{"key":"10.1016\/j.resmic.2025.104306_bib34","doi-asserted-by":"crossref","unstructured":"Tao R, Ying GG, Su HC, Zhou HW, Sidhu JP. Detection of antibiotic resistance and tetracycline resistance genes in Enterobacteriaceae isolated from the Pearl rivers in South China. Environ Pollut (Barking, Essex : 1987), 158(6): 2101-2109.https:\/\/doi.org\/10.1016\/j.envpol.2010.03.004.","DOI":"10.1016\/j.envpol.2010.03.004"},{"key":"10.1016\/j.resmic.2025.104306_bib35","doi-asserted-by":"crossref","unstructured":"Zhang S, Yang H, Rehman MU, Yang K, Dong M, Yang J, et al. Class 1 integrons as predominant carriers in Escherichia coli isolates from waterfowls in Hainan, China. Ecotoxicol Environ Saf, 183: 109514.https:\/\/doi.org\/10.1016\/j.ecoenv.2019.109514.","DOI":"10.1016\/j.ecoenv.2019.109514"},{"key":"10.1016\/j.resmic.2025.104306_bib36","doi-asserted-by":"crossref","unstructured":"Zhu Z, Pan S, Wei B, Liu H, Zhou Z, Huang X, et al. High prevalence of multi-drug resistances and diversity of mobile genetic elements in Escherichia coli isolates from captive giant pandas. Ecotoxicol Environ Saf, 198: 110681.https:\/\/doi.org\/10.1016\/j.ecoenv.2020.110681.","DOI":"10.1016\/j.ecoenv.2020.110681"},{"key":"10.1016\/j.resmic.2025.104306_bib37","doi-asserted-by":"crossref","unstructured":"Warnes SL, Highmore CJ, Keevil CW. Horizontal transfer of antibiotic resistance genes on abiotic touch surfaces: implications for public health. mBio, 3(6).https:\/\/doi.org\/10.1128\/mBio.00489-12.","DOI":"10.1128\/mBio.00489-12"},{"key":"10.1016\/j.resmic.2025.104306_bib38","doi-asserted-by":"crossref","unstructured":"Wu J, Huang Y, Rao D, Zhang Y, Yang K. Evidence for environmental dissemination of antibiotic resistance mediated by wild birds. Front Microbiol, 9: 745.https:\/\/doi.org\/10.3389\/fmicb.2018.00745.","DOI":"10.3389\/fmicb.2018.00745"},{"key":"10.1016\/j.resmic.2025.104306_bib39","unstructured":"\u015eahan Yapicier O, Hesna Kandir E, \u00d6zt\u00fcrk D. Antimicrobial resistance of E. coli and salmonella isolated from wild birds in a rehabilitation center in Turkey. Arch Razi Inst, 77(1): 257-267.https:\/\/doi.org\/10.22092\/ari.2021.356322.1823."},{"key":"10.1016\/j.resmic.2025.104306_bib40","doi-asserted-by":"crossref","unstructured":"Ma L, Li AD, Yin XL, Zhang T. The prevalence of integrons as the carrier of antibiotic resistance genes in natural and man-made environments. Environ Sci Technol, 51(10): 5721-5728.https:\/\/doi.org\/10.1021\/acs.est.6b05887.","DOI":"10.1021\/acs.est.6b05887"},{"key":"10.1016\/j.resmic.2025.104306_bib41","doi-asserted-by":"crossref","unstructured":"Liao F, Wang G, Yi L, Shi Z, Cheng G, Kong Q, et al. Identifying locations and sources of groundwater discharge into Poyang Lake (eastern China) using radium and stable isotopes (deuterium and oxygen-18). Sci Total Environ, 740: 140163.https:\/\/doi.org\/10.1016\/j.scitotenv.2020.140163.","DOI":"10.1016\/j.scitotenv.2020.140163"},{"key":"10.1016\/j.resmic.2025.104306_bib42","doi-asserted-by":"crossref","unstructured":"Liao M, Yu G, Guo Y. Eutrophication in Poyang Lake (Eastern China) over the last 300 years in response to changes in climate and Lake biomass. PLoS One, 12(1): e0169319.https:\/\/doi.org\/10.1371\/journal.pone.0169319.","DOI":"10.1371\/journal.pone.0169319"},{"key":"10.1016\/j.resmic.2025.104306_bib43","doi-asserted-by":"crossref","unstructured":"Pu J, Wang S, Ni Z, Wu Y, Liu X, Wu T, et al. Implications of phosphorus partitioning at the suspended particle-water interface for lake eutrophication in China's largest freshwater lake, Poyang Lake. Chemosphere, 263: 128334.https:\/\/doi.org\/10.1016\/j.chemosphere.2020.128334.","DOI":"10.1016\/j.chemosphere.2020.128334"}],"container-title":["Research in Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0923250825000415?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0923250825000415?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T02:22:03Z","timestamp":1788229323000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0923250825000415"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,9]]},"references-count":43,"journal-issue":{"issue":"7","published-print":{"date-parts":[[2025,9]]}},"alternative-id":["S0923250825000415"],"URL":"https:\/\/doi.org\/10.1016\/j.resmic.2025.104306","relation":{},"ISSN":["0923-2508"],"issn-type":[{"value":"0923-2508","type":"print"}],"subject":[],"published":{"date-parts":[[2025,9]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Multi-drug resistance and diversity of mobile genetic elements in Escherichia coli isolated from migratory bird in Poyang Lake","name":"articletitle","label":"Article Title"},{"value":"Research in Microbiology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.resmic.2025.104306","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 Institut Pasteur. Published by Elsevier Masson SAS.","name":"copyright","label":"Copyright"}],"article-number":"104306"}}