{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T04:28:45Z","timestamp":1793507325137,"version":"4.5.0"},"reference-count":89,"publisher":"Elsevier BV","issue":"8","license":[{"start":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T00:00:00Z","timestamp":1761955200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T00:00:00Z","timestamp":1761955200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T00:00:00Z","timestamp":1793491200000},"content-version":"vor","delay-in-days":365,"URL":"http:\/\/www.elsevier.com\/open-access\/userlicense\/1.0\/"}],"funder":[{"DOI":"10.13039\/501100001411","name":"Indian Council of Medical Research","doi-asserted-by":"publisher","award":["Diarr\/Adhoc\/5\/2022-ECD-II"],"award-info":[{"award-number":["Diarr\/Adhoc\/5\/2022-ECD-II"]}],"id":[{"id":"10.13039\/501100001411","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001412","name":"Council of Scientific and Industrial Research, India","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001412","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100019108","name":"National Chemical Laboratory","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100019108","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001407","name":"Department of Biotechnology, Ministry of Science and Technology, India","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001407","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001843","name":"Science and Engineering Research Board","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001843","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Research in Microbiology"],"published-print":{"date-parts":[[2025,11]]},"DOI":"10.1016\/j.resmic.2025.104356","type":"journal-article","created":{"date-parts":[[2025,12,5]],"date-time":"2025-12-05T08:07:38Z","timestamp":1764922058000},"page":"104356","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":2,"title":["Deletion of major shell proteins of ethanolamine utilization microcompartment reduces intrinsic antibiotic resistance, biofilm, and intracellular survival of Salmonella Typhimurium"],"prefix":"10.1016","volume":"176","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6839-4593","authenticated-orcid":false,"given":"Minal R.","family":"Bhalerao","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2729-0418","authenticated-orcid":false,"given":"Aishwarya S.","family":"Davkhar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ajit R.","family":"Sawant","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6403-032X","authenticated-orcid":false,"given":"Anindya S.","family":"Ghosh","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tiffany N.","family":"Harris","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Thomas A.","family":"Bobik","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ankita","family":"Saha","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sachin B.","family":"Agawane","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2026-5324","authenticated-orcid":false,"given":"Chiranjit","family":"Chowdhury","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.resmic.2025.104356_bib1","doi-asserted-by":"crossref","first-page":"4786","DOI":"10.1038\/s41467-021-25073-w","article-title":"Evolutionary dynamics of multidrug resistant Salmonella enterica serovar 4,[5],12:i:- in Australia","volume":"12","author":"Ingle","year":"2021","journal-title":"Nat Commun"},{"key":"10.1016\/j.resmic.2025.104356_bib2","doi-asserted-by":"crossref","first-page":"267","DOI":"10.1007\/s12088-023-01176-4","article-title":"A systemic review on fitness and survival of salmonella in dynamic environment and conceivable ways of its mitigation","volume":"64","author":"Sutar","year":"2024","journal-title":"Indian J Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib3","doi-asserted-by":"crossref","first-page":"1312","DOI":"10.1016\/S1473-3099(19)30418-9","article-title":"The global burden of non-typhoidal salmonella invasive disease: a systematic analysis for the global burden of disease study 2017","volume":"19","year":"2019","journal-title":"Lancet Infect Dis"},{"key":"10.1016\/j.resmic.2025.104356_bib4","doi-asserted-by":"crossref","first-page":"901","DOI":"10.1128\/CMR.00002-15","article-title":"Epidemiology, clinical presentation, laboratory diagnosis, antimicrobial resistance, and antimicrobial management of invasive Salmonella infections","volume":"28","author":"Crump","year":"2015","journal-title":"Clin Microbiol Rev"},{"key":"10.1016\/j.resmic.2025.104356_bib5","article-title":"Fluoroquinolone resistance in Salmonella: insights by whole-genome sequencing","volume":"4","author":"Cuypers","year":"2018","journal-title":"Microb Genom"},{"key":"10.1016\/j.resmic.2025.104356_bib6","doi-asserted-by":"crossref","DOI":"10.3390\/foods7100167","article-title":"Antibiotic-resistant Salmonella in the food supply and the potential role of antibiotic alternatives for control","volume":"7","author":"V T Nair","year":"2018","journal-title":"Foods"},{"key":"10.1016\/j.resmic.2025.104356_bib7","doi-asserted-by":"crossref","first-page":"60","DOI":"10.1016\/j.ijregi.2021.09.006","article-title":"Outbreak of ceftriaxone-resistant Salmonella enterica serotype Typhi-Tiruchirappalli, Tamil Nadu, India, June 2018","volume":"1","author":"Dzeyie","year":"2021","journal-title":"IJID Reg"},{"key":"10.1016\/j.resmic.2025.104356_bib8","doi-asserted-by":"crossref","first-page":"882","DOI":"10.1086\/650733","article-title":"Collaboration on Enteric Disease 'burden of Illness, the global burden of nontyphoidal Salmonella gastroenteritis","volume":"50","author":"Majowicz","year":"2010","journal-title":"Clin Infect Dis"},{"key":"10.1016\/j.resmic.2025.104356_bib9","doi-asserted-by":"crossref","first-page":"318","DOI":"10.1016\/S1473-3099(17)30753-3","article-title":"Discovery, research, and development of new antibiotics: the WHO priority list of antibiotic-resistant bacteria and tuberculosis","volume":"18","author":"Tacconelli","year":"2018","journal-title":"Lancet Infect Dis"},{"key":"10.1016\/j.resmic.2025.104356_bib10","doi-asserted-by":"crossref","first-page":"801","DOI":"10.3389\/fmicb.2020.00801","article-title":"Investigation of a salmonellosis outbreak caused by multidrug resistant Salmonella Typhimurium in China","volume":"11","author":"Xiang","year":"2020","journal-title":"Front Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib11","doi-asserted-by":"crossref","DOI":"10.1101\/cshperspect.a027029","article-title":"Aminoglycosides: an overview","volume":"6","author":"Krause","year":"2016","journal-title":"Cold Spring Harb Perspect Med"},{"key":"10.1016\/j.resmic.2025.104356_bib12","doi-asserted-by":"crossref","first-page":"920","DOI":"10.1128\/AAC.00382-07","article-title":"Aminoglycosides affect intracellular Salmonella enterica serovars typhimurium and virchow","volume":"52","author":"Menashe","year":"2008","journal-title":"Antimicrob Agents Chemother"},{"key":"10.1016\/j.resmic.2025.104356_bib13","doi-asserted-by":"crossref","DOI":"10.1080\/19490976.2023.2229937","article-title":"Better together-Salmonella biofilm-associated antibiotic resistance","volume":"15","author":"Aleksandrowicz","year":"2023","journal-title":"Gut Microbes"},{"key":"10.1016\/j.resmic.2025.104356_bib14","doi-asserted-by":"crossref","first-page":"985","DOI":"10.3389\/fmicb.2019.00985","article-title":"Antibiotic resistance in Salmonella Typhimurium isolates recovered from the food chain through national antimicrobial resistance monitoring System between 1996 and 2016","volume":"10","author":"Wang","year":"2019","journal-title":"Front Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib15","doi-asserted-by":"crossref","first-page":"138","DOI":"10.3389\/fvets.2017.00138","article-title":"Examining the link between biofilm Formation and the ability of pathogenic salmonella strains to colonize multiple host species","volume":"4","author":"MacKenzie","year":"2017","journal-title":"Front Vet Sci"},{"key":"10.1016\/j.resmic.2025.104356_bib16","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0181365","article-title":"Transcriptome and proteome analysis of Salmonella enterica serovar Typhimurium systemic infection of wild type and immune-deficient mice","volume":"12","author":"Oshota","year":"2017","journal-title":"PLoS One"},{"key":"10.1016\/j.resmic.2025.104356_bib17","doi-asserted-by":"crossref","first-page":"8832","DOI":"10.1038\/s41598-019-45216-w","article-title":"Microevolution of antimicrobial resistance and biofilm formation of Salmonella Typhimurium during persistence on pig farms","volume":"9","author":"Tassinari","year":"2019","journal-title":"Sci Rep"},{"key":"10.1016\/j.resmic.2025.104356_bib18","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1038\/s41522-020-00178-0","article-title":"Exposure of Salmonella biofilms to antibiotic concentrations rapidly selects resistance with collateral tradeoffs","volume":"7","author":"Trampari","year":"2021","journal-title":"NPJ Biofilms Microbiomes"},{"key":"10.1016\/j.resmic.2025.104356_bib19","doi-asserted-by":"crossref","DOI":"10.1371\/journal.ppat.1004209","article-title":"Fructose-asparagine is a primary nutrient during growth of Salmonella in the inflamed intestine","volume":"10","author":"Ali","year":"2014","journal-title":"PLoS Pathog"},{"key":"10.1016\/j.resmic.2025.104356_bib20","doi-asserted-by":"crossref","first-page":"251","DOI":"10.1016\/j.cmet.2019.06.009","article-title":"Bacterial metabolism and antibiotic efficacy","volume":"30","author":"Stokes","year":"2019","journal-title":"Cell Metab"},{"key":"10.1016\/j.resmic.2025.104356_bib21","doi-asserted-by":"crossref","first-page":"284","DOI":"10.1021\/acsmedchemlett.1c00648","article-title":"Antibacterial activity of metergoline analogues: revisiting the ergot Alkaloid scaffold for antibiotic discovery","volume":"13","author":"Johnson","year":"2022","journal-title":"ACS Med Chem Lett"},{"key":"10.1016\/j.resmic.2025.104356_bib22","doi-asserted-by":"crossref","first-page":"438","DOI":"10.1128\/MMBR.00009-14","article-title":"Diverse bacterial microcompartment organelles","volume":"78","author":"Chowdhury","year":"2014","journal-title":"Microbiol Mol Biol Rev"},{"key":"10.1016\/j.resmic.2025.104356_bib23","doi-asserted-by":"crossref","first-page":"290","DOI":"10.1038\/nrmicro2334","article-title":"Ethanolamine utilization in bacterial pathogens: roles and regulation","volume":"8","author":"Garsin","year":"2010","journal-title":"Nat Rev Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib24","doi-asserted-by":"crossref","first-page":"497","DOI":"10.1111\/mmi.13243","article-title":"The EutQ and EutP proteins are novel acetate kinases involved in ethanolamine catabolism: physiological implications for the function of the ethanolamine metabolosome in Salmonella enterica","volume":"99","author":"Moore","year":"2016","journal-title":"Mol Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib25","doi-asserted-by":"crossref","first-page":"7157","DOI":"10.1128\/JB.00838-09","article-title":"Comparative genomics of ethanolamine utilization","volume":"191","author":"Tsoy","year":"2009","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib26","doi-asserted-by":"crossref","first-page":"17480","DOI":"10.1073\/pnas.1107857108","article-title":"Intestinal inflammation allows Salmonella to use ethanolamine to compete with the microbiota","volume":"108","author":"Thiennimitr","year":"2011","journal-title":"Proc Natl Acad Sci U S A"},{"key":"10.1016\/j.resmic.2025.104356_bib27","doi-asserted-by":"crossref","first-page":"325","DOI":"10.1016\/j.ebiom.2019.03.071","article-title":"Inflammation associated ethanolamine facilitates infection by Crohn's disease-linked adherent-invasive Escherichia coli","volume":"43","author":"Ormsby","year":"2019","journal-title":"EBioMedicine"},{"key":"10.1016\/j.resmic.2025.104356_bib28","doi-asserted-by":"crossref","DOI":"10.3390\/medsci10030040","article-title":"Polyamine and ethanolamine metabolism in bacteria as an important component of nitrogen assimilation for survival and pathogenicity","volume":"10","author":"Krysenko","year":"2022","journal-title":"Med Sci"},{"key":"10.1016\/j.resmic.2025.104356_bib29","doi-asserted-by":"crossref","first-page":"19","DOI":"10.1016\/j.mib.2021.05.009","article-title":"Bacterial microcompartments and their role in pathogenicity","volume":"63","author":"Prentice","year":"2021","journal-title":"Curr Opin Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib30","doi-asserted-by":"crossref","first-page":"92","DOI":"10.2174\/1566524017666170331161715","article-title":"Ethanolamine metabolism in the Mammalian gastrointestinal tract: mechanisms, patterns, and importance","volume":"17","author":"Zhou","year":"2017","journal-title":"Curr Mol Med"},{"key":"10.1016\/j.resmic.2025.104356_bib31","doi-asserted-by":"crossref","first-page":"508","DOI":"10.1111\/j.1758-2229.2011.00242.x","article-title":"Intestinal and chronic infections: salmonella lifestyles in hostile environments","volume":"3","author":"Baumler","year":"2011","journal-title":"Environ Microbiol Rep"},{"key":"10.1016\/j.resmic.2025.104356_bib32","doi-asserted-by":"crossref","DOI":"10.1128\/jb.00269-24","article-title":"Bacterial microcompartment utilization in the human commensal Escherichia coli Nissle 1917","volume":"206","author":"Clare","year":"2024","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib33","doi-asserted-by":"crossref","DOI":"10.1016\/j.resmic.2022.103989","article-title":"Diversity of ethanolamine utilization by human commensal Escherichiacoli","volume":"174","author":"Moreira de Gouveia","year":"2023","journal-title":"Res Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib34","doi-asserted-by":"crossref","first-page":"2175","DOI":"10.1038\/s41598-019-38628-1","article-title":"Metabolic adaptation of adherent-invasive Escherichia coli to exposure to bile salts","volume":"9","author":"Delmas","year":"2019","journal-title":"Sci Rep"},{"key":"10.1016\/j.resmic.2025.104356_bib35","article-title":"Nitrate is an environmental cue in the gut for Salmonella enterica Serovar Typhimurium biofilm dispersal through curli repression and flagellum activation via Cyclic-di-GMP signaling","volume":"13","author":"Miller","year":"2021","journal-title":"mBio"},{"key":"10.1016\/j.resmic.2025.104356_bib36","doi-asserted-by":"crossref","DOI":"10.1371\/journal.ppat.1008313","article-title":"Parallel quorum-sensing system in Vibrio cholerae prevents signal interference inside the host","volume":"16","author":"Watve","year":"2020","journal-title":"PLoS Pathog"},{"key":"10.1016\/j.resmic.2025.104356_bib37","doi-asserted-by":"crossref","DOI":"10.1172\/jci.insight.157013","article-title":"Mucosal metabolites fuel the growth and virulence of E. coli linked to Crohn's disease","volume":"7","author":"Zhang","year":"2022","journal-title":"JCI Insight"},{"key":"10.1016\/j.resmic.2025.104356_bib38","article-title":"Antimicrobial resistance profiling of biofilm forming non typhoidal Salmonella enterica isolates from poultry and its associated food products from Pakistan","volume":"10","author":"Siddique","year":"2021","journal-title":"Antibiotics (Basel)"},{"key":"10.1016\/j.resmic.2025.104356_bib39","doi-asserted-by":"crossref","DOI":"10.1016\/j.biopha.2024.116716","article-title":"Tannic acid inhibits Escherichia coli biofilm formation and underlying molecular mechanisms: biofilm regulator CsgD","volume":"175","author":"Long","year":"2024","journal-title":"Biomed Pharmacother"},{"key":"10.1016\/j.resmic.2025.104356_bib40","doi-asserted-by":"crossref","first-page":"45","DOI":"10.1186\/1745-6150-7-45","article-title":"Ethanolamine utilization in Vibrio alginolyticus","volume":"7","author":"Khatri","year":"2012","journal-title":"Biol Direct"},{"key":"10.1016\/j.resmic.2025.104356_bib41","doi-asserted-by":"crossref","first-page":"2864","DOI":"10.1128\/JB.02179-12","article-title":"Evidence that a metabolic microcompartment contains and recycles private cofactor pools","volume":"195","author":"Huseby","year":"2013","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib42","doi-asserted-by":"crossref","first-page":"193","DOI":"10.1111\/mmi.13117","article-title":"Bacterial microcompartments: widespread prokaryotic organelles for isolation and optimization of metabolic pathways","volume":"98","author":"Bobik","year":"2015","journal-title":"Mol Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib43","doi-asserted-by":"crossref","DOI":"10.1128\/mBio.00066-18","article-title":"Ethanolamine utilization in bacteria","volume":"9","author":"Kaval","year":"2018","journal-title":"mBio"},{"key":"10.1016\/j.resmic.2025.104356_bib44","doi-asserted-by":"crossref","first-page":"28","DOI":"10.1016\/j.mib.2021.04.008","article-title":"Ethanolamine bacterial microcompartments: from structure, function studies to bioengineering applications","volume":"62","author":"Pokhrel","year":"2021","journal-title":"Curr Opin Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib45","doi-asserted-by":"crossref","first-page":"468","DOI":"10.1128\/IAI.72.1.468-477.2004","article-title":"Role of neutrophils in murine salmonellosis","volume":"72","author":"Cheminay","year":"2004","journal-title":"Infect Immun"},{"key":"10.1016\/j.resmic.2025.104356_bib46","doi-asserted-by":"crossref","first-page":"191","DOI":"10.1111\/mmi.14962","article-title":"Localization and interaction studies of the Salmonella enterica ethanolamine ammonia-lyase (EutBC), its reactivase (EutA), and the EutT corrinoid adenosyltransferase","volume":"118","author":"Costa","year":"2022","journal-title":"Mol Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib47","doi-asserted-by":"crossref","DOI":"10.1371\/journal.ppat.1005558","article-title":"Dumpster diving in the gut: bacterial microcompartments as part of a host-associated lifestyle","volume":"12","author":"Jakobson","year":"2016","journal-title":"PLoS Pathog"},{"key":"10.1016\/j.resmic.2025.104356_bib48","doi-asserted-by":"crossref","first-page":"5317","DOI":"10.1128\/JB.181.17.5317-5329.1999","article-title":"The 17-gene ethanolamine (eut) operon of Salmonella typhimurium encodes five homologues of carboxysome shell proteins","volume":"181","author":"Kofoid","year":"1999","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib49","doi-asserted-by":"crossref","first-page":"277","DOI":"10.1038\/nrmicro.2018.10","article-title":"Bacterial microcompartments","volume":"16","author":"Kerfeld","year":"2018","journal-title":"Nat Rev Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib50","doi-asserted-by":"crossref","first-page":"81","DOI":"10.1126\/science.1179513","article-title":"Structure and mechanisms of a protein-based organelle in Escherichia coli","volume":"327","author":"Tanaka","year":"2010","journal-title":"Science"},{"key":"10.1016\/j.resmic.2025.104356_bib51","doi-asserted-by":"crossref","first-page":"8039","DOI":"10.1128\/JB.187.23.8039-8046.2005","article-title":"Minimal functions and physiological conditions required for growth of salmonella enterica on ethanolamine in the absence of the metabolosome","volume":"187","author":"Brinsmade","year":"2005","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib52","doi-asserted-by":"crossref","first-page":"1385","DOI":"10.1128\/JB.01473-10","article-title":"Genetic analysis of the protein shell of the microcompartments involved in coenzyme B12-dependent 1,2-propanediol degradation by Salmonella","volume":"193","author":"Cheng","year":"2011","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib53","doi-asserted-by":"crossref","first-page":"2865","DOI":"10.1128\/JB.188.8.2865-2874.2006","article-title":"Conserving a volatile metabolite: a role for carboxysome-like organelles in Salmonella enterica","volume":"188","author":"Penrod","year":"2006","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib54","article-title":"Molecular basis of the biogenesis of a protein organelle for ethanolamine utilization","author":"Yang","year":"2024","journal-title":"bioRxiv"},{"key":"10.1016\/j.resmic.2025.104356_bib55","doi-asserted-by":"crossref","first-page":"956","DOI":"10.1002\/pro.2672","article-title":"An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein","volume":"24","author":"Thompson","year":"2015","journal-title":"Protein Sci"},{"key":"10.1016\/j.resmic.2025.104356_bib56","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0033342","article-title":"Engineered protein nano-compartments for targeted enzyme localization","volume":"7","author":"Choudhary","year":"2012","journal-title":"PLoS One"},{"key":"10.1016\/j.resmic.2025.104356_bib57","doi-asserted-by":"crossref","first-page":"1357","DOI":"10.1128\/jb.177.5.1357-1366.1995","article-title":"Ethanolamine utilization in Salmonella typhimurium: nucleotide sequence, protein expression, and mutational analysis of the cchA cchB eutE eutJ eutG eutH gene cluster","volume":"177","author":"Stojiljkovic","year":"1995","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib58","article-title":"Molecular basis of the biogenesis of a protein organelle for ethanolamine utilization","volume":"11","author":"Yang","year":"2025","journal-title":"Sci Adv"},{"key":"10.1016\/j.resmic.2025.104356_bib59","doi-asserted-by":"crossref","DOI":"10.1128\/JB.00055-19","article-title":"Human bile-mediated regulation of Salmonella Curli fimbriae","volume":"201","author":"Gonzalez","year":"2019","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib60","doi-asserted-by":"crossref","first-page":"7635","DOI":"10.1128\/JB.186.22.7635-7644.2004","article-title":"Evidence that a B12-adenosyl transferase is encoded within the ethanolamine operon of Salmonella enterica","volume":"186","author":"Sheppard","year":"2004","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib61","doi-asserted-by":"crossref","first-page":"770","DOI":"10.1111\/mmi.13423","article-title":"The function of the PduJ microcompartment shell protein is determined by the genomic position of its encoding gene","volume":"101","author":"Chowdhury","year":"2016","journal-title":"Mol Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib62","doi-asserted-by":"crossref","first-page":"1355","DOI":"10.1099\/mic.0.000872","article-title":"Engineering the PduT shell protein to modify the permeability of the 1,2-propanediol microcompartment of Salmonella","volume":"165","author":"Chowdhury","year":"2019","journal-title":"Microbiology (Read)"},{"key":"10.1016\/j.resmic.2025.104356_bib63","doi-asserted-by":"crossref","first-page":"6640","DOI":"10.1073\/pnas.120163297","article-title":"One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products","volume":"97","author":"Datsenko","year":"2000","journal-title":"Proc Natl Acad Sci U S A"},{"key":"10.1016\/j.resmic.2025.104356_bib64","series-title":"Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically","author":"Institute","year":"2024"},{"key":"10.1016\/j.resmic.2025.104356_bib65","doi-asserted-by":"crossref","first-page":"1007","DOI":"10.1038\/s41467-020-14685-3","article-title":"Salmonella Typhimurium biofilm disruption by a human antibody that binds a pan-amyloid epitope on curli","volume":"11","author":"Tursi","year":"2020","journal-title":"Nat Commun"},{"key":"10.1016\/j.resmic.2025.104356_bib66","doi-asserted-by":"crossref","first-page":"202","DOI":"10.1186\/1471-2180-9-202","article-title":"Biofilm formation as a novel phenotypic feature of adherent-invasive Escherichia coli (AIEC)","volume":"9","author":"Martinez-Medina","year":"2009","journal-title":"BMC Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib67","doi-asserted-by":"crossref","first-page":"2160","DOI":"10.3389\/fmicb.2017.02160","article-title":"Nutrient composition promotes switching between pellicle and bottom biofilm in salmonella","volume":"8","author":"Paytubi","year":"2017","journal-title":"Front Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib68","first-page":"169","article-title":"A single shell protein plays a major role in choline transport across the shell of the choline utilization microcompartment of Escherichia coli 536","author":"Ochoa","year":"2023","journal-title":"Microbiology (Read)"},{"key":"10.1016\/j.resmic.2025.104356_bib69","doi-asserted-by":"crossref","DOI":"10.1128\/aac.01033-22","article-title":"Penicillin binding protein 7\/8 is a potential drug target in carbapenem-resistant Acinetobacter baumannii","volume":"67","author":"Russo","year":"2023","journal-title":"Antimicrob Agents Chemother"},{"key":"10.1016\/j.resmic.2025.104356_bib70","doi-asserted-by":"crossref","first-page":"1826","DOI":"10.1128\/AAC.02750-15","article-title":"Regulatory mutations impacting antibiotic susceptibility in an established Staphylococcus aureus biofilm","volume":"60","author":"Atwood","year":"2016","journal-title":"Antimicrob Agents Chemother"},{"key":"10.1016\/j.resmic.2025.104356_bib71","doi-asserted-by":"crossref","DOI":"10.1128\/IAI.00211-19","article-title":"Bacterial microcompartment-mediated ethanolamine metabolism in Escherichia coli urinary tract infection","volume":"87","author":"Dadswell","year":"2019","journal-title":"Infect Immun"},{"key":"10.1016\/j.resmic.2025.104356_bib72","doi-asserted-by":"crossref","DOI":"10.1128\/msystems.00750-24","article-title":"Integrative in vivo analysis of the ethanolamine utilization bacterial microcompartment in Escherichia coli","volume":"9","author":"Jallet","year":"2024","journal-title":"mSystems"},{"key":"10.1016\/j.resmic.2025.104356_bib73","doi-asserted-by":"crossref","first-page":"225","DOI":"10.1007\/978-1-4939-7240-1_18","article-title":"Semiquantitative analysis of the red, dry, and rough colony morphology of Salmonella enterica Serovar Typhimurium and Escherichia coli using Congo red","volume":"1657","author":"Cimdins","year":"2017","journal-title":"Methods Mol Biol"},{"key":"10.1016\/j.resmic.2025.104356_bib74","doi-asserted-by":"crossref","first-page":"235","DOI":"10.1016\/j.diagmicrobio.2012.11.014","article-title":"Modification of the Congo red agar method to detect biofilm production by Staphylococcus epidermidis","volume":"75","author":"Kaiser","year":"2013","journal-title":"Diagn Microbiol Infect Dis"},{"key":"10.1016\/j.resmic.2025.104356_bib75","doi-asserted-by":"crossref","first-page":"418","DOI":"10.1111\/j.1365-2672.2005.02499.x","article-title":"Role of curli fimbriae in mediating the cells of enterohaemorrhagic Escherichia coli to attach to abiotic surfaces","volume":"99","author":"Pawar","year":"2005","journal-title":"J Appl Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib76","doi-asserted-by":"crossref","DOI":"10.1016\/j.micpath.2023.106323","article-title":"Inhibitory effect of resveratrol on swimming motility and adhesion ability against Salmonella enterica serovar Typhimurium infection","volume":"184","author":"Lou","year":"2023","journal-title":"Microb Pathog"},{"key":"10.1016\/j.resmic.2025.104356_bib77","doi-asserted-by":"crossref","DOI":"10.3390\/microorganisms12020232","article-title":"The role of flagellum and flagellum-based motility on salmonella enteritidis and Escherichia coli biofilm Formation","volume":"12","author":"Vilas Boas","year":"2024","journal-title":"Microorganisms"},{"key":"10.1016\/j.resmic.2025.104356_bib78","doi-asserted-by":"crossref","first-page":"1695","DOI":"10.3389\/fmicb.2020.01695","article-title":"Flagellar motility is critical for Salmonella enterica Serovar Typhimurium Biofilm development","volume":"11","author":"Wang","year":"2020","journal-title":"Front Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib79","article-title":"Ethanolamine signaling promotes salmonella niche recognition and adaptation during infection","volume":"11","author":"Anderson","year":"2015","journal-title":"PLoS Pathog"},{"key":"10.1016\/j.resmic.2025.104356_bib80","doi-asserted-by":"crossref","first-page":"7375","DOI":"10.1128\/AAC.03778-14","article-title":"Sensitization of intracellular Salmonella enterica serovar Typhimurium to aminoglycosides in vitro and in vivo by a host-targeted antimicrobial agent","volume":"58","author":"Lo","year":"2014","journal-title":"Antimicrob Agents Chemother"},{"key":"10.1016\/j.resmic.2025.104356_bib81","doi-asserted-by":"crossref","first-page":"423","DOI":"10.1038\/nrmicro2333","article-title":"How antibiotics kill bacteria: from targets to networks","volume":"8","author":"Kohanski","year":"2010","journal-title":"Nat Rev Microbiol"},{"key":"10.1016\/j.resmic.2025.104356_bib82","article-title":"Potential next generation targets for antibacterial agent's discovery and development","volume":"301","author":"Gupta","year":"2025","journal-title":"Eur J Med Chem"},{"key":"10.1016\/j.resmic.2025.104356_bib83","doi-asserted-by":"crossref","DOI":"10.1016\/j.lanmic.2024.07.010","article-title":"Antimicrobial resistance: a concise update","volume":"6","author":"Ho","year":"2025","journal-title":"Lancet Microbe"},{"key":"10.1016\/j.resmic.2025.104356_bib84","doi-asserted-by":"crossref","first-page":"336","DOI":"10.1038\/nature17042","article-title":"Antibacterial drug discovery in the resistance era","volume":"529","author":"Brown","year":"2016","journal-title":"Nature"},{"key":"10.1016\/j.resmic.2025.104356_bib85","doi-asserted-by":"crossref","DOI":"10.1128\/spectrum.01027-25","article-title":"Specific variants in ftsI reduce carbapenem susceptibility in Pseudomonas aeruginosa","author":"Yano","year":"2025","journal-title":"Microbiol Spectr"},{"key":"10.1016\/j.resmic.2025.104356_bib86","doi-asserted-by":"crossref","first-page":"5086","DOI":"10.1128\/JB.185.17.5086-5095.2003","article-title":"Protein content of polyhedral organelles involved in coenzyme B12-dependent degradation of 1,2-propanediol in Salmonella enterica serovar Typhimurium LT2","volume":"185","author":"Havemann","year":"2003","journal-title":"J Bacteriol"},{"key":"10.1016\/j.resmic.2025.104356_bib87","doi-asserted-by":"crossref","first-page":"1880","DOI":"10.1021\/acssynbio.7b00042","article-title":"Evidence for improved encapsulated pathway behavior in a bacterial microcompartment through shell protein engineering","volume":"6","author":"Slininger Lee","year":"2017","journal-title":"ACS Synth Biol"},{"key":"10.1016\/j.resmic.2025.104356_bib88","doi-asserted-by":"crossref","DOI":"10.1128\/mbio.03405-24","article-title":"Ethanolamine-induced assembly of microcompartments is required for Fusobacterium nucleatum virulence","volume":"16","author":"Franklin","year":"2025","journal-title":"mBio"},{"key":"10.1016\/j.resmic.2025.104356_bib89","doi-asserted-by":"crossref","DOI":"10.1128\/iai.00162-24","article-title":"Role of ethanolamine utilization and bacterial microcompartment formation in Listeria monocytogenes intracellular infection","volume":"92","author":"Chatterjee","year":"2024","journal-title":"Infect Immun"}],"container-title":["Research in Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0923250825000919?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0923250825000919?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,11,1]],"date-time":"2026-11-01T03:29:09Z","timestamp":1793503749000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0923250825000919"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,11]]},"references-count":89,"journal-issue":{"issue":"8","published-print":{"date-parts":[[2025,11]]}},"alternative-id":["S0923250825000919"],"URL":"https:\/\/doi.org\/10.1016\/j.resmic.2025.104356","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2025.07.17.665469","asserted-by":"object"}]},"ISSN":["0923-2508"],"issn-type":[{"value":"0923-2508","type":"print"}],"subject":[],"published":{"date-parts":[[2025,11]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Deletion of major shell proteins of ethanolamine utilization microcompartment reduces intrinsic antibiotic resistance, biofilm, and intracellular survival of Salmonella Typhimurium","name":"articletitle","label":"Article Title"},{"value":"Research in Microbiology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.resmic.2025.104356","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 Institut Pasteur. Published by Elsevier Masson SAS.","name":"copyright","label":"Copyright"}],"article-number":"104356"}}