{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,12]],"date-time":"2026-06-12T15:20:36Z","timestamp":1781277636777,"version":"3.54.1"},"reference-count":35,"publisher":"Elsevier BV","issue":"9","license":[{"start":{"date-parts":[[2018,9,1]],"date-time":"2018-09-01T00:00:00Z","timestamp":1535760000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2018,9,1]],"date-time":"2018-09-01T00:00:00Z","timestamp":1535760000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"}],"content-domain":{"domain":["bmn.com","cell.com","clinicalkey.com","clinicalkey.com.au","clinicalkey.es","clinicalkey.fr","clinicalkey.jp","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Trends in Microbiology"],"published-print":{"date-parts":[[2018,9]]},"DOI":"10.1016\/j.tim.2018.02.008","type":"journal-article","created":{"date-parts":[[2018,3,1]],"date-time":"2018-03-01T08:34:59Z","timestamp":1519893299000},"page":"748-754","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":20,"title":["Of Mice and Men....and Plants: Comparative Genomics of the Dual Lifestyles of Enteric Pathogens"],"prefix":"10.1016","volume":"26","author":[{"given":"Max","family":"Teplitski","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marcos","family":"de Moraes","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.tim.2018.02.008_bib0005","doi-asserted-by":"crossref","first-page":"316","DOI":"10.1094\/PHYTO-11-12-0295-RVW","article-title":"Salmonella interactions with plants and their associated microbiota","volume":"103","author":"Brandl","year":"2013","journal-title":"Phytopathology"},{"key":"10.1016\/j.tim.2018.02.008_bib0010","doi-asserted-by":"crossref","first-page":"404","DOI":"10.1186\/1471-2164-15-404","article-title":"Analysis of the Pantoea ananatis pan-genome reveals factors underlying its ability to colonize and interact with plant, insect and vertebrate hosts","volume":"15","author":"De Maayer","year":"2014","journal-title":"BMC Genomics"},{"key":"10.1016\/j.tim.2018.02.008_bib0015","doi-asserted-by":"crossref","first-page":"2075","DOI":"10.1007\/s00438-015-1062-2","article-title":"Inheritance of Pantoea type III secretion systems through both vertical and horizontal transfer","volume":"290","author":"Kirzinger","year":"2015","journal-title":"Mol. Genet. Genomics"},{"key":"10.1016\/j.tim.2018.02.008_bib0020","doi-asserted-by":"crossref","first-page":"669","DOI":"10.1007\/s00248-016-0820-y","article-title":"Evidence for an opportunistic and endophytic lifestyle of the Bursaphelenchus xylophilus-associated bacteria Serratia marcescens PWN146 isolated from wilting Pinus pinaster","volume":"72","author":"Vicente","year":"2016","journal-title":"Microb. Ecol."},{"key":"10.1016\/j.tim.2018.02.008_bib0025","doi-asserted-by":"crossref","first-page":"1879","DOI":"10.1128\/AAC.01605-13","article-title":"Characterization of Klebsiella sp. strain 10982, a colonizer of humans that contains novel antibiotic resistance alleles and exhibits genetic similarities to plant and clinical Klebsiella isolates","volume":"58","author":"Hazen","year":"2014","journal-title":"Antimicrob. Agents Chemother."},{"key":"10.1016\/j.tim.2018.02.008_bib0030","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pgen.1000141","article-title":"Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice","volume":"4","author":"Fouts","year":"2008","journal-title":"PLoS Genet."},{"key":"10.1016\/j.tim.2018.02.008_bib0035","doi-asserted-by":"crossref","DOI":"10.1101\/cshperspect.a010041","article-title":"Host specificity of bacterial pathogens","volume":"3","author":"Baumler","year":"2013","journal-title":"Cold Spring Harb. Perspect. Med."},{"key":"10.1016\/j.tim.2018.02.008_bib0040","doi-asserted-by":"crossref","first-page":"415","DOI":"10.3389\/fmicb.2015.00415","article-title":"Ecological prevalence, genetic diversity, and epidemiological aspects of Salmonella isolated from tomato agricultural regions of the Virginia Eastern Shore","volume":"6","author":"Bell","year":"2015","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.tim.2018.02.008_bib0045","doi-asserted-by":"crossref","first-page":"157","DOI":"10.1017\/S095026880700859X","article-title":"Recurrent multistate outbreak of Salmonella Newport associated with tomatoes from contaminated fields","volume":"136","author":"Greene","year":"2005","journal-title":"Epidemiol. Infect."},{"key":"10.1016\/j.tim.2018.02.008_bib0050","doi-asserted-by":"crossref","first-page":"1352","DOI":"10.1017\/S0950268814002167","article-title":"Multistate foodborne disease outbreaks associated with raw tomatoes, United States, 1990\u20132010: a recurring public health problem","volume":"143","author":"Bennett","year":"2015","journal-title":"Epidemiol. Infect."},{"key":"10.1016\/j.tim.2018.02.008_bib0055","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0080871","article-title":"Factors that affect proliferation of Salmonella in tomatoes post-harvest: the roles of seasonal effects, irrigation regime, crop and pathogen genotype","volume":"8","author":"Marvasi","year":"2013","journal-title":"PLoS One"},{"key":"10.1016\/j.tim.2018.02.008_bib0060","doi-asserted-by":"crossref","first-page":"2725","DOI":"10.4315\/0362-028X-70.12.2725","article-title":"Persistence and growth of different Salmonella serovars on pre- and postharvest tomatoes","volume":"70","author":"Shi","year":"2007","journal-title":"J. Food Protect."},{"key":"10.1016\/j.tim.2018.02.008_bib0065","doi-asserted-by":"crossref","first-page":"1783","DOI":"10.1128\/AEM.69.3.1783-1790.2003","article-title":"Kinetics and strain specificity of rhizosphere and endophytic colonization by enteric bacteria on seedlings of Medicago sativa and Medicago truncatula","volume":"69","author":"Dong","year":"2003","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.tim.2018.02.008_bib0070","doi-asserted-by":"crossref","first-page":"453","DOI":"10.1111\/j.1758-2229.2012.00364.x","article-title":"Spontaneous non-rdar mutations increase fitness of Salmonella in plants","volume":"4","author":"Zaragoza","year":"2012","journal-title":"Environ. Microbiol. Rep."},{"key":"10.1016\/j.tim.2018.02.008_bib0075","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0146929","article-title":"Whole genome DNA sequence analysis of Salmonella subspecies enterica serotype Tennessee obtained from related peanut butter foodborne outbreaks","volume":"11","author":"Wilson","year":"2016","journal-title":"PLoS One"},{"key":"10.1016\/j.tim.2018.02.008_bib0080","doi-asserted-by":"crossref","first-page":"985","DOI":"10.3389\/fmicb.2016.00985","article-title":"Whole genome sequencing for genomics-guided investigations of Escherichia coli O157:H7 outbreaks","volume":"7","author":"Rusconi","year":"2016","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.tim.2018.02.008_bib0085","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0167870","article-title":"Strain-level discrimination of Shiga toxin-producing Escherichia coli in spinach using metagenomic sequencing","volume":"11","author":"Leonard","year":"2016","journal-title":"PLoS One"},{"key":"10.1016\/j.tim.2018.02.008_bib0090","first-page":"419","article-title":"Whole-genome comparative analysis of virulence genes unveils similarities and differences between endophytes and other symbiotic bacteria","volume":"6","author":"Lopez-Fernandez","year":"2015","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.tim.2018.02.008_bib0095","doi-asserted-by":"crossref","first-page":"247","DOI":"10.1016\/j.ijfoodmicro.2012.01.024","article-title":"Comparative genomics analysis of Salmonella enterica subsp. enterica serovar Weltevreden foodborne strains with other serovars","volume":"155","author":"Brankatschk","year":"2012","journal-title":"Int. J. Food Microbiol."},{"key":"10.1016\/j.tim.2018.02.008_bib0100","doi-asserted-by":"crossref","first-page":"3713","DOI":"10.1128\/IAI.00198-09","article-title":"Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence","volume":"77","author":"Kulasekara","year":"2009","journal-title":"Infect. Immun."},{"key":"10.1016\/j.tim.2018.02.008_bib0105","doi-asserted-by":"crossref","first-page":"193","DOI":"10.1016\/j.jtbi.2013.10.007","article-title":"A bioinformatics approach to the determination of genes involved in endophytic behavior in Burkholderia spp","volume":"343","author":"Ali","year":"2014","journal-title":"J. Theoret. Biol."},{"key":"10.1016\/j.tim.2018.02.008_bib0110","doi-asserted-by":"crossref","first-page":"6327","DOI":"10.1128\/AEM.00892-12","article-title":"The bacterium Pantoea stewartii uses two different type III secretion systems to colonize its plant host and insect vector","volume":"78","author":"Correa","year":"2012","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.tim.2018.02.008_bib0115","doi-asserted-by":"crossref","first-page":"4100","DOI":"10.1128\/AEM.00898-16","article-title":"Development of an avirulent Salmonella surrogate for modeling pathogen behavior in pre- and postharvest environments","volume":"82","author":"de Moraes","year":"2016","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.tim.2018.02.008_bib0120","article-title":"Salmonella persistence in tomatoes requires a distinct set of metabolic functions identified by transposon insertion sequencing","author":"de Moraes","year":"2016","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.tim.2018.02.008_bib0125","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0012406","article-title":"Specific responses of Salmonella enterica to tomato varieties and fruit ripeness identified by in vivo expression technology","volume":"5","author":"Noel","year":"2010","journal-title":"PLoS One"},{"key":"10.1016\/j.tim.2018.02.008_bib0130","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0024112","article-title":"Conservation of Salmonella infection mechanisms in plants and animals","volume":"6","author":"Schikora","year":"2011","journal-title":"PLoS One"},{"key":"10.1016\/j.tim.2018.02.008_bib0135","doi-asserted-by":"crossref","first-page":"233","DOI":"10.1094\/MPMI-07-17-0166-R","article-title":"Assessing the ability of Salmonella enterica to translocate Type III effectors into plant cells","volume":"31","author":"Chalupowicz","year":"2018","journal-title":"Mol. Plant-Microbe Interact."},{"key":"10.1016\/j.tim.2018.02.008_bib0140","doi-asserted-by":"crossref","first-page":"1094","DOI":"10.1128\/JB.01449-13","article-title":"Identification of HilD-regulated genes in Salmonella enterica serovar Typhimurium","volume":"196","author":"Petrone","year":"2014","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.tim.2018.02.008_bib0145","doi-asserted-by":"crossref","first-page":"2668","DOI":"10.3389\/fmicb.2017.02668","article-title":"Production of the plant hormone auxin by Salmonella and its role in the interactions with plants and animals","volume":"8","author":"Cox","year":"2017","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.tim.2018.02.008_bib0150","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0087970","article-title":"Response of Medicago truncatula seedlings to colonization by Salmonella enterica and Escherichia coli O157:H7","volume":"9","author":"Jayaraman","year":"2014","journal-title":"PLoS One"},{"key":"10.1016\/j.tim.2018.02.008_bib0155","first-page":"141","article-title":"Salmonella enterica induces and subverts the plant immune system","volume":"5","author":"Garcia","year":"2014","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.tim.2018.02.008_bib0160","doi-asserted-by":"crossref","first-page":"528","DOI":"10.1111\/1751-7915.12104","article-title":"Transcriptional profile of Salmonella enterica subsp. enterica serovar Weltevreden during alfalfa sprout colonization","volume":"7","author":"Brankatschk","year":"2013","journal-title":"Microb. Biotechnol."},{"key":"10.1016\/j.tim.2018.02.008_bib0165","doi-asserted-by":"crossref","first-page":"928","DOI":"10.1111\/1758-2229.12457","article-title":"Involvement of the Rcs regulon in the persistence of Salmonella Typhimurium in tomatoes","volume":"8","author":"Marvasi","year":"2016","journal-title":"Environ. Microbiol. Rep."},{"key":"10.1016\/j.tim.2018.02.008_bib0170","doi-asserted-by":"crossref","DOI":"10.1371\/journal.ppat.1000477","article-title":"Analysis of pools of targeted Salmonella deletion mutants identifies novel genes affecting fitness during competitive infection in mice","volume":"5","author":"Santiviago","year":"2009","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.tim.2018.02.008_bib0175","series-title":"Foodborne Illness Source Attribution Estimates for 2013 for Salmonella, Escherichia coli O157, Listeria monocytogenes, and Campylobacter Using Multi-Year Outbreak Surveillance Data, United States","author":"Interagency Food Safety Analytics Collaboration","year":"2017"}],"container-title":["Trends in Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0966842X18300441?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0966842X18300441?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,10,18]],"date-time":"2025-10-18T18:39:05Z","timestamp":1760812745000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0966842X18300441"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,9]]},"references-count":35,"journal-issue":{"issue":"9","published-print":{"date-parts":[[2018,9]]}},"alternative-id":["S0966842X18300441"],"URL":"https:\/\/doi.org\/10.1016\/j.tim.2018.02.008","relation":{},"ISSN":["0966-842X"],"issn-type":[{"value":"0966-842X","type":"print"}],"subject":[],"published":{"date-parts":[[2018,9]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Of Mice and Men....and Plants: Comparative Genomics of the Dual Lifestyles of Enteric Pathogens","name":"articletitle","label":"Article Title"},{"value":"Trends in Microbiology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.tim.2018.02.008","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"Published by Elsevier Ltd.","name":"copyright","label":"Copyright"}]}}