{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,27]],"date-time":"2026-09-27T02:54:53Z","timestamp":1790477693830,"version":"4.1.0"},"reference-count":80,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2016,4,1]],"date-time":"2016-04-01T00:00:00Z","timestamp":1459468800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"funder":[{"name":"SERB, Department of Science and Technology and CSIR, Govt. of India","award":["SERB\/YS\/LS-123\/2013"],"award-info":[{"award-number":["SERB\/YS\/LS-123\/2013"]}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Veterinary Immunology and Immunopathology"],"published-print":{"date-parts":[[2016,4]]},"DOI":"10.1016\/j.vetimm.2016.03.002","type":"journal-article","created":{"date-parts":[[2016,3,5]],"date-time":"2016-03-05T19:57:51Z","timestamp":1457207871000},"page":"26-37","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":26,"special_numbering":"C","title":["Tracing the evolutionary lineage of pattern recognition receptor homologues in vertebrates: An insight into reptilian immunity via de novo sequencing of the wall lizard splenic transcriptome"],"prefix":"10.1016","volume":"172","author":[{"given":"Manisha","family":"Priyam","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mamta","family":"Tripathy","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Umesh","family":"Rai","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Soma Mondal","family":"Ghorai","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.vetimm.2016.03.002_bib0005","doi-asserted-by":"crossref","first-page":"783","DOI":"10.1016\/j.cell.2006.02.015","article-title":"Pathogen recognition and innate immunity","volume":"124","author":"Akira","year":"2006","journal-title":"Cell"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0010","doi-asserted-by":"crossref","first-page":"587","DOI":"10.1038\/nature10390","article-title":"The genome of the green anole lizard and a comparative analysis with birds and mammals","volume":"477","author":"Alf\u00f6ldi","year":"2011","journal-title":"Nature"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0015","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","article-title":"Basic local alignment search tool","volume":"215","author":"Altschul","year":"1990","journal-title":"J. Mol. Biol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0020","doi-asserted-by":"crossref","first-page":"368","DOI":"10.1186\/1471-2148-11-368","article-title":"Signatures of positive selection in Toll-like receptor (TLR) genes in mammals","volume":"11","author":"Areal","year":"2011","journal-title":"BMC Evol. Biol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0025","doi-asserted-by":"crossref","first-page":"81","DOI":"10.1093\/gbe\/evu266","article-title":"Constraint and adaptation in newt Toll-like receptor genes","volume":"7","author":"Babik","year":"2015","journal-title":"Gen. Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0030","series-title":"Toll-Like Receptor Family Members and their Ligands","first-page":"81","article-title":"Toll-like receptors and their ligands","author":"Barton","year":"2002"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0035","doi-asserted-by":"crossref","first-page":"1792","DOI":"10.1093\/gbe\/evt131","article-title":"The first chameleon transcriptome: comparative genomic analysis of the OXPHOS system reveals loss of COX8 in Iguanian lizards","volume":"5","author":"Bar-Yaacov","year":"2013","journal-title":"Genome Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0040","doi-asserted-by":"crossref","first-page":"4930","DOI":"10.4049\/jimmunol.1101790","article-title":"TLR15 is unique to avian and reptilian lineages and recognizes a yeast-derived agonist","volume":"189","author":"Boyd","year":"2012","journal-title":"J. Immunol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0045","first-page":"18","article-title":"Aspects of light and reptile immunity","volume":"14","author":"Brames","year":"2007","journal-title":"Iguana"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0050","doi-asserted-by":"crossref","first-page":"389","DOI":"10.1093\/gbe\/evt013","article-title":"Contrasted evolution of the vomeronasal receptor repertoires in mammals and squamate reptiles","volume":"5","author":"Brykczynska","year":"2013","journal-title":"Genome Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0055","doi-asserted-by":"crossref","first-page":"539","DOI":"10.1016\/j.ceb.2003.08.004","article-title":"Dual function of C-type lectin-like receptors in the immune system","volume":"15","author":"Cambi","year":"2003","journal-title":"Curr. Opin. Cell Biol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0060","doi-asserted-by":"crossref","first-page":"20645","DOI":"10.1073\/pnas.1314475110","article-title":"The Burmese python genome reveals the molecular basis for extreme adaptation in snakes","volume":"110","author":"Castoe","year":"2013","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0065","doi-asserted-by":"crossref","first-page":"587","DOI":"10.1016\/j.dci.2013.07.002","article-title":"IFN-\u03b3 and its receptors in a reptile reveal the evolutionary conservation of type II IFNs in vertebrates","volume":"41","author":"Chen","year":"2013","journal-title":"Dev. Comp. Immunol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0070","doi-asserted-by":"crossref","first-page":"65","DOI":"10.1186\/1741-7007-10-65","article-title":"Phylogenomic analyses support the position of turtles as the sister group of birds and crocodiles (Archosauria)","volume":"10","author":"Chiari","year":"2012","journal-title":"BMC Biol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0075","first-page":"210","article-title":"Toll-like receptors: an overview from invertebrates to vertebrates","volume":"8","author":"Coscia","year":"2011","journal-title":"ISJ"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0080","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1155\/2010\/853916","article-title":"Uncovering the complexity of transcriptomes with RNA-Seq","author":"Costa","year":"2010","journal-title":"J. Biomed. Biotechnol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0085","doi-asserted-by":"crossref","first-page":"783","DOI":"10.1098\/rsbl.2012.0331","article-title":"More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs","volume":"8","author":"Crawford","year":"2012","journal-title":"Biol. Lett."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0090","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1038\/hdy.2010.152","article-title":"Applications of next generation sequencing in molecular ecology of non-model organisms","volume":"107","author":"Ekblom","year":"2011","journal-title":"Heredity"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0095","doi-asserted-by":"crossref","first-page":"189","DOI":"10.1111\/ede.12081","article-title":"Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles","volume":"16","author":"Field","year":"2014","journal-title":"Evol. Dev."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0100","doi-asserted-by":"crossref","first-page":"240","DOI":"10.1093\/gbe\/evu277","article-title":"Biased gene conversion and GC-content evolution in the coding sequences of reptiles and vertebrates","volume":"7","author":"Figuet","year":"2015","journal-title":"Genome Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0105","doi-asserted-by":"crossref","first-page":"553","DOI":"10.1126\/science.2237407","article-title":"Protection of mice against the Lyme disease agent by immunizing with recombinant OspA","volume":"250","author":"Fikrig","year":"1990","journal-title":"Science"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0110","doi-asserted-by":"crossref","first-page":"87","DOI":"10.1016\/j.dci.2013.11.001","article-title":"IFN-\u03b3 in turtle: conservation in sequence and signalling and role in inhibiting iridovirus replication in Chinese soft-shelled turtle Pelodiscus sinensis","volume":"43","author":"Fu","year":"2014","journal-title":"Dev. Comp. Immunol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0115","doi-asserted-by":"crossref","first-page":"659","DOI":"10.1093\/jhered\/esp086","article-title":"Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species","volume":"100","author":"G10KCOS,","year":"2009","journal-title":"J. Heredity"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0120","doi-asserted-by":"crossref","first-page":"3784","DOI":"10.1093\/nar\/gkg563","article-title":"ExPASy: the proteomics server for in-depth protein knowledge and analysis","volume":"31","author":"Gasteiger","year":"2003","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0125","doi-asserted-by":"crossref","first-page":"819","DOI":"10.4049\/jimmunol.91.6.819","article-title":"Phylogeny of the immune response: studies on some physical, chemical, and serologic characteristics of antibody produced in the turtle","volume":"91","author":"Grey","year":"1963","journal-title":"J. Immunol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0130","doi-asserted-by":"crossref","first-page":"89632","DOI":"10.1371\/journal.pone.0089632","article-title":"Episodic positive selection in the evolution of avian toll-like receptor innate immunity genes","volume":"9","author":"Grueber","year":"2014","journal-title":"PLoS One"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0135","doi-asserted-by":"crossref","first-page":"64","DOI":"10.1186\/1741-7007-10-64","article-title":"Amniote phylogeny and the position of turtles","volume":"10","author":"Hedges","year":"2012","journal-title":"BMC Biol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0140","doi-asserted-by":"crossref","first-page":"4618","DOI":"10.1002\/elps.200800456","article-title":"Advantages and limitations of next-generation sequencing technologies: a comparison of electrophoresis and non-electrophoresis methods","volume":"29","author":"Hert","year":"2008","journal-title":"Electrophoresis"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0145","first-page":"860921","article-title":"Initial sequencing and analysis of the human genome","volume":"409","author":"IHGSC","year":"2001","journal-title":"Nature"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0150","doi-asserted-by":"crossref","first-page":"479","DOI":"10.1016\/0165-2427(83)90008-9","article-title":"The humoral immune response of the spiny-tailed agamid lizard (Agama caudospinosum) to injection with Leishmania agamae promastigotes","volume":"4","author":"Ingram","year":"1983","journal-title":"Vet. Immunol. Immunopathol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0155","doi-asserted-by":"crossref","first-page":"102","DOI":"10.1093\/gbe\/evq087","article-title":"Reptiles and mammals have differentially retained long conserved noncoding sequences from the amniote ancestor","volume":"3","author":"Janes","year":"2011","journal-title":"Genome Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0160","doi-asserted-by":"crossref","first-page":"415","DOI":"10.4049\/jimmunol.109.3.415","article-title":"The immune response to sheep erythrocytes in the lizard Calotes versicolor","volume":"109","author":"Kanakambika","year":"1972","journal-title":"J. Immunol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0165","doi-asserted-by":"crossref","first-page":"D764","DOI":"10.1093\/nar\/gkt1168","article-title":"The UCSC genome browser database: 2014 update","volume":"2014","author":"Karolchik","year":"2014","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0170","doi-asserted-by":"crossref","first-page":"2725","DOI":"10.1093\/molbev\/mst197","article-title":"MEGA6: molecular evolutionary genetics analysis version 6.0","volume":"30","author":"Koichiro","year":"2013","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0175","doi-asserted-by":"crossref","first-page":"1223","DOI":"10.1645\/0022-3395(2000)086[1223:ACSOMA]2.0.CO;2","article-title":"A comparative study of mammalian and reptilian alternative pathway of complement-mediated killing of the Lyme disease spirochete (Borrelia burgdorferi)","volume":"86","author":"Kuo","year":"2000","journal-title":"J. Parasitol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0180","doi-asserted-by":"crossref","first-page":"16270","DOI":"10.1073\/pnas.1208796109","article-title":"DEC-205 is a cell surface receptor for CpG oligonucleotides","volume":"109","author":"Lahoud","year":"2012","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0185","doi-asserted-by":"crossref","first-page":"e113","DOI":"10.7717\/peerj.113","article-title":"Improving transcriptome assembly through error correction of high-throughput sequence reads","volume":"1","author":"MacManes","year":"2013","journal-title":"Peer J."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0190","doi-asserted-by":"crossref","first-page":"35","DOI":"10.1016\/j.antiviral.2004.12.007","article-title":"Antiviral activity of serum from the American alligator (Alligator mississippiensis)","volume":"66","author":"Merchant","year":"2005","journal-title":"Antiviral Res."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0195","doi-asserted-by":"crossref","first-page":"1480","DOI":"10.1645\/GE-3382","article-title":"Amoebacidal effects of serum from the American alligator (Alligator mississippiensis)","volume":"90","author":"Merchant","year":"2004","journal-title":"J. Parasitol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0200","doi-asserted-by":"crossref","first-page":"39","DOI":"10.1038\/nature04946","article-title":"Intracellular pattern recognition receptors in the host response","volume":"442","author":"Meylan","year":"2006","journal-title":"Nature"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0205","doi-asserted-by":"crossref","first-page":"439","DOI":"10.1186\/1471-2164-13-439","article-title":"De novo sequence assembly and characterisation of a partial transcriptome for an evolutionarily distinct reptile, the tuatara (Sphenodon punctatus)","volume":"13","author":"Miller","year":"2012","journal-title":"BMC Genomics"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0210","doi-asserted-by":"crossref","first-page":"291","DOI":"10.1006\/gcen.1999.7370","article-title":"Sexual dimorphism in phagocytic activity of wall lizard\u2019s splenic macrophages and its control by sex steroids","volume":"116","author":"Mondal","year":"1999","journal-title":"Gen. Comp. Endocrinol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0215","doi-asserted-by":"crossref","first-page":"W182","DOI":"10.1093\/nar\/gkm321","article-title":"KAAS: an automatic genome annotation and pathway reconstruction server","volume":"35","author":"Moriya","year":"2007","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0220","doi-asserted-by":"crossref","first-page":"140","DOI":"10.1093\/molbev\/mst184","article-title":"Ancient origins of vertebrate-specific innate antiviral immunity","volume":"31","author":"Mukherjee","year":"2014","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0225","series-title":"Janeway's Immunobiology","author":"Murphy","year":"2011"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0230","doi-asserted-by":"crossref","first-page":"597","DOI":"10.1095\/biolreprod.109.082081","article-title":"Lymphocyte antigen 75 (Ly75\/CD205) is a surface marker on mitotic germ cells in rainbow trout","volume":"83","author":"Nagasawa","year":"2010","journal-title":"Biol. Rep."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0235","doi-asserted-by":"crossref","first-page":"3156","DOI":"10.1128\/JCM.39.9.3156-3163.2001","article-title":"Enzyme-linked immunosorbent assay for detecting herpesvirus exposure in Mediterranean tortoises (spur-thighed tortoise [Testudo graeca] and Hermann\u2019s tortoise [Testuto hermanni])","volume":"39","author":"Origgi","year":"2001","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0240","doi-asserted-by":"crossref","first-page":"701","DOI":"10.1038\/ng.2615","article-title":"The draft genomes of the soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan","volume":"45","author":"Pascual-Anaya","year":"2013","journal-title":"Nat. Genet."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0245","doi-asserted-by":"crossref","first-page":"676","DOI":"10.1093\/bioinformatics\/bti079","article-title":"HyPhy: hypothesis testing using phylogenies","volume":"21","author":"Pond","year":"2005","journal-title":"Bioinformatics"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0250","doi-asserted-by":"crossref","first-page":"1891","DOI":"10.1093\/molbev\/msl051","article-title":"Automated phylogenetic detection of recombination using a genetic algorithm","volume":"23","author":"Pond","year":"2006","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0255","doi-asserted-by":"crossref","first-page":"e2119","DOI":"10.1371\/journal.pone.0002119","article-title":"The Nod-like receptor (NLR) family: a tale of similarities and differences","volume":"3","author":"Proell","year":"2008","journal-title":"PLoS One"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0260","doi-asserted-by":"crossref","first-page":"196","DOI":"10.1638\/1042-7260(2001)032[0196:EIOBNC]2.0.CO;2","article-title":"Experimental inoculation of broad-nosed caimans (Caiman latirostris) and Siamese crocodiles (Crocodyllus siamensis) with Mycoplasma alligatoris","volume":"32","author":"Pye","year":"2001","journal-title":"J. Zoo Wildl. Med."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0265","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1016\/j.imlet.2012.08.003","article-title":"Immune system and immune responses in fish and their role in comparative immunity study: a model for higher organisms","volume":"148","author":"Rauta","year":"2012","journal-title":"Immunol. Lett."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0270","doi-asserted-by":"crossref","first-page":"9577","DOI":"10.1073\/pnas.0502272102","article-title":"The evolution of vertebrate Toll-like receptors","volume":"102","author":"Roach","year":"2005","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0275","doi-asserted-by":"crossref","first-page":"46","DOI":"10.1016\/j.coi.2012.12.007","article-title":"Sensing of cell death by myeloid C-type lectin receptors","volume":"25","author":"Sancho","year":"2013","journal-title":"Curr. Opin. Immunol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0280","doi-asserted-by":"crossref","first-page":"17040","DOI":"10.1073\/pnas.0804956105","article-title":"Evolution of MDA-5\/RIG-I-dependent innate immunity: independent evolution by domain grafting","volume":"105","author":"Sarkar","year":"2008","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0285","doi-asserted-by":"crossref","first-page":"2493","DOI":"10.1093\/bioinformatics\/btl427","article-title":"Robust inference of positive selection from recombining coding sequences","volume":"22","author":"Scheffler","year":"2006","journal-title":"Bioinformatics"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0290","doi-asserted-by":"crossref","first-page":"694","DOI":"10.1186\/1471-2164-11-694","article-title":"A garter snake transcriptome: pyrosequencing, de novo assembly, and sex-specific differences","volume":"11","author":"Schwartz","year":"2010","journal-title":"BMC Genomics"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0295","doi-asserted-by":"crossref","first-page":"R28","DOI":"10.1186\/gb-2013-14-3-r28","article-title":"The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage","author":"Shaffer","year":"2013","journal-title":"Genome Biol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0300","series-title":"Handbook of Toxinology: Venom Genomics and Proteomics","article-title":"Squamate reptile genomics and evolution","author":"Shaneya","year":"2014"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0305","first-page":"3","article-title":"A genome draft of the legless anguid lizard, Ophisaurus gracilis","volume":"56","author":"Song","year":"2015","journal-title":"DNA"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0310","doi-asserted-by":"crossref","first-page":"415","DOI":"10.1186\/gb-2012-13-1-415","article-title":"Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes","volume":"13","author":"St John","year":"2012","journal-title":"Genome Biol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0315","doi-asserted-by":"crossref","first-page":"805","DOI":"10.1016\/j.cell.2010.01.022","article-title":"Pattern recognition receptors and inflammation","volume":"140","author":"Takeuchi","year":"2010","journal-title":"Cell"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0320","doi-asserted-by":"crossref","first-page":"22","DOI":"10.1093\/nar\/29.1.22","article-title":"The COG database: new developments in phylogenetic classification of proteins from complete genomes","volume":"29","author":"Tatusov","year":"2001","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0325","doi-asserted-by":"crossref","first-page":"1754","DOI":"10.1093\/gbe\/evt133","article-title":"Lizards and LINEs: selection and demography affect the fate of L1 retrotransposons in the genome of the green anole (Anolis carolinensis)","volume":"5","author":"Tollis","year":"2013","journal-title":"Genome Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0330","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0116588","article-title":"Daily and seasonal rhythms in immune responses of splenocytes in the freshwater snake, Natrix piscator","author":"Tripathi","year":"2015","journal-title":"PLoS One"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0335","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/2041-9139-2-19","article-title":"Reptilian-transcriptome v1.0: a glimpse in the brain transcriptome of five divergent Sauropsida lineages and the phylogenetic position of turtles","volume":"2","author":"Tzika","year":"2011","journal-title":"EvoDevo"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0340","series-title":"Reptilian Transcriptomes v2: An Extensive Resource for Sauropsida Genomics and Transcriptomics (Doctoral Dissertation)","author":"Ullate Agote","year":"2014"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0345","doi-asserted-by":"crossref","first-page":"1304","DOI":"10.1126\/science.1058040","article-title":"The sequence of the human genome","volume":"291","author":"Venter","year":"2001","journal-title":"Science"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0350","doi-asserted-by":"crossref","first-page":"20651","DOI":"10.1073\/pnas.1314702110","article-title":"The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system","volume":"110","author":"Vonk","year":"2013","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0355","first-page":"6","article-title":"Reptile Toll-like receptor 5 unveils adaptive evolution of bacterial flagellin recognition","author":"Voogdt","year":"2016","journal-title":"Sci. Rep."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0360","doi-asserted-by":"crossref","first-page":"69","DOI":"10.1152\/physiolgenomics.00162.2010","article-title":"Whole transcriptome analysis of the fasting and fed Burmese python heart: insights into extreme physiological cardiac adaptation","volume":"43","author":"Wall","year":"2011","journal-title":"Physiol. Genomics"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0365","article-title":"Genomic data of the Chinese alligator (Alligator sinensis)","author":"Wan","year":"2014","journal-title":"GigaScience Database"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0370","doi-asserted-by":"crossref","first-page":"1658","DOI":"10.1093\/bioinformatics\/btl158","article-title":"Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences","volume":"22","author":"Weizhong","year":"2006","journal-title":"Bioinformatics"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0375","doi-asserted-by":"crossref","first-page":"937","DOI":"10.1093\/molbev\/msp018","article-title":"A history of recurrent positive selection at the Toll-like receptor 5 in primates","volume":"26","author":"Wlasiuk","year":"2009","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0380","doi-asserted-by":"crossref","first-page":"e112218","DOI":"10.1371\/journal.pone.0112218","article-title":"Exploring the genetic basis of adaptation to high elevations in reptiles: a comparative transcriptome analysis of two toad-headed agamas (genus Phrynocephalus)","volume":"9","author":"Yang","year":"2014","journal-title":"PLoS One"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0385","doi-asserted-by":"crossref","first-page":"106","DOI":"10.1093\/molbev\/mst174","article-title":"The characterization of sponge NLRs provides insight into the origin and evolution of this innate immune gene family in animals","volume":"31","author":"Yuen","year":"2013","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.vetimm.2016.03.002_bib0390","doi-asserted-by":"crossref","first-page":"131","DOI":"10.1016\/j.toxicon.2014.05.011","article-title":"Unraveling snake venom complexity with \u2018omics\u2019 approaches: challenges and perspectives","volume":"87","author":"Zelanis","year":"2014","journal-title":"Toxicon"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0395","doi-asserted-by":"crossref","first-page":"263","DOI":"10.1007\/s00251-010-0428-1","article-title":"Domain architecture evolution of pattern-recognition receptors","volume":"62","author":"Zhang","year":"2010","journal-title":"Immunogenetics"},{"key":"10.1016\/j.vetimm.2016.03.002_bib0400","doi-asserted-by":"crossref","first-page":"661","DOI":"10.1242\/jeb.038315","article-title":"Understanding the vertebrate immune system: insights from the reptilian perspective","volume":"213","author":"Zimmerman","year":"2010","journal-title":"J. Exp. Biol."}],"container-title":["Veterinary Immunology and Immunopathology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0165242716300277?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0165242716300277?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2024,6,14]],"date-time":"2024-06-14T20:20:57Z","timestamp":1718396457000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0165242716300277"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016,4]]},"references-count":80,"alternative-id":["S0165242716300277"],"URL":"https:\/\/doi.org\/10.1016\/j.vetimm.2016.03.002","relation":{},"ISSN":["0165-2427"],"issn-type":[{"value":"0165-2427","type":"print"}],"subject":[],"published":{"date-parts":[[2016,4]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Tracing the evolutionary lineage of pattern recognition receptor homologues in vertebrates: An insight into reptilian immunity via de novo sequencing of the wall lizard splenic transcriptome","name":"articletitle","label":"Article Title"},{"value":"Veterinary Immunology and Immunopathology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.vetimm.2016.03.002","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"Copyright \u00a9 2016 Elsevier B.V. All rights reserved.","name":"copyright","label":"Copyright"}]}}