{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,7]],"date-time":"2026-10-07T21:33:43Z","timestamp":1791408823381,"version":"4.3.3"},"reference-count":38,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2020,3,1]],"date-time":"2020-03-01T00:00:00Z","timestamp":1583020800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2020,3,1]],"date-time":"2020-03-01T00:00:00Z","timestamp":1583020800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"}],"funder":[{"DOI":"10.13039\/501100008990","name":"Science and Technology Department of Zhejiang Province","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100008990","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100012165","name":"Key Technologies Research and Development Program","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100012165","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Veterinary Microbiology"],"published-print":{"date-parts":[[2020,3]]},"DOI":"10.1016\/j.vetmic.2019.108564","type":"journal-article","created":{"date-parts":[[2019,12,23]],"date-time":"2019-12-23T12:30:57Z","timestamp":1577104257000},"page":"108564","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":14,"special_numbering":"C","title":["Identification of functional lncRNAs in pseudorabies virus type II infected cells"],"prefix":"10.1016","volume":"242","author":[{"given":"Yulan","family":"Jin","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kailun","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wenxiang","family":"Huang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wen","family":"Tang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Haimin","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Weiren","family":"Dong","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jinyan","family":"Gu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jiyong","family":"Zhou","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.vetmic.2019.108564_bib0005","doi-asserted-by":"crossref","first-page":"1087","DOI":"10.3201\/eid2406.171612","article-title":"Human endophthalmitis caused by pseudorabies virus infection, China, 2017","volume":"24","author":"Ai","year":"2018","journal-title":"Emerg. Infect. Dis."},{"key":"10.1016\/j.vetmic.2019.108564_bib0010","doi-asserted-by":"crossref","first-page":"1749","DOI":"10.3201\/eid1911.130177","article-title":"Pseudorabies virus variant in Bartha-K61-vaccinated pigs, China, 2012","volume":"19","author":"An","year":"2013","journal-title":"Emerg. Infect. Dis."},{"key":"10.1016\/j.vetmic.2019.108564_bib0015","doi-asserted-by":"crossref","first-page":"1749","DOI":"10.3201\/eid1911.130177","article-title":"Pseudorabies virus variant in Bartha-K61\u2014Vaccinated pigs, China, 2012","volume":"19","author":"An","year":"2013","journal-title":"Emerg Infect Dis."},{"key":"10.1016\/j.vetmic.2019.108564_bib0020","doi-asserted-by":"crossref","first-page":"13019","DOI":"10.1128\/JVI.01296-10","article-title":"Resolving the assembly state of herpes simplex virus during axon transport by live-cell imaging","volume":"84","author":"Antinone","year":"2010","journal-title":"J. Virol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0025","doi-asserted-by":"crossref","first-page":"1013","DOI":"10.15252\/embr.201541763","article-title":"Long noncoding RNA EGOT negatively affects the antiviral response and favors HCV replication","volume":"17","author":"Carnero","year":"2016","journal-title":"EMBO Rep."},{"key":"10.1016\/j.vetmic.2019.108564_bib0030","doi-asserted-by":"crossref","DOI":"10.1128\/JVI.00539-18","article-title":"Lnc-ISG20 inhibits influenza a virus replication by enhancing ISG20 expression","volume":"92","author":"Chai","year":"2018","journal-title":"J. Virol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0035","doi-asserted-by":"crossref","first-page":"1357","DOI":"10.1182\/blood-2012-08-452482","article-title":"Anti-IFN-\u03b3 autoantibodies in adults with disseminated nontuberculous mycobacterial infections are associated with HLA-DRB1*16:02 and HLA-DQB1*05:02 and the reactivation of latent varicella-zoster virus infection","volume":"121","author":"Chih-Yu","year":"2013","journal-title":"Blood"},{"key":"10.1016\/j.vetmic.2019.108564_bib0040","doi-asserted-by":"crossref","first-page":"176","DOI":"10.1016\/j.chom.2017.07.012","article-title":"Ten strategies of interferon evasion by viruses","volume":"22","author":"Garc\u00eda-Sastre","year":"2017","journal-title":"Cell Host Microbe"},{"issue":"5","key":"10.1016\/j.vetmic.2019.108564_bib0045","doi-asserted-by":"crossref","first-page":"597","DOI":"10.1007\/s13365-018-0651-3","article-title":"Expression of pseudorabies virus-encoded long noncoding RNAs in epithelial cells and neurons","volume":"24","author":"Guan","year":"2018","journal-title":"J. Neurovirol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0050","doi-asserted-by":"crossref","first-page":"1768","DOI":"10.1038\/onc.2014.131","article-title":"A long noncoding RNA critically regulates Bcr-Abl-mediated cellular transformation by acting as a competitive endogenous RNA","volume":"34","author":"Guo","year":"2014","journal-title":"Oncogene"},{"key":"10.1016\/j.vetmic.2019.108564_bib0055","doi-asserted-by":"crossref","first-page":"1071","DOI":"10.1038\/nature08975","article-title":"Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis","volume":"464","author":"Gupta","year":"2010","journal-title":"Nature"},{"key":"10.1016\/j.vetmic.2019.108564_bib0060","doi-asserted-by":"crossref","first-page":"223","DOI":"10.1038\/nature07672","article-title":"Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals","volume":"458","author":"Guttman","year":"2009","journal-title":"Nature"},{"key":"10.1016\/j.vetmic.2019.108564_bib0065","doi-asserted-by":"crossref","first-page":"1705","DOI":"10.1093\/infdis\/jiy731","article-title":"Interspecies transmission, genetic diversity, and evolutionary dynamics of pseudorabies virus","volume":"219","author":"He","year":"2019","journal-title":"J. Infect. Dis."},{"key":"10.1016\/j.vetmic.2019.108564_bib0070","doi-asserted-by":"crossref","first-page":"621","DOI":"10.1038\/ng.848","article-title":"Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters","volume":"43","author":"Hung","year":"2011","journal-title":"Nat. Genet."},{"key":"10.1016\/j.vetmic.2019.108564_bib0075","doi-asserted-by":"crossref","first-page":"D480","DOI":"10.1093\/nar\/gkm882","article-title":"KEGG for linking genomes to life and the environment","volume":"36","author":"Kanehisa","year":"2008","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.vetmic.2019.108564_bib0080","doi-asserted-by":"crossref","first-page":"R36","DOI":"10.1186\/gb-2013-14-4-r36","article-title":"TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions","volume":"14","author":"Kim","year":"2013","journal-title":"Genome Biol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0085","doi-asserted-by":"crossref","DOI":"10.1002\/lary.27510","article-title":"ROS is involved in disruption of tight junctions of human nasal epithelial cells induced by HRV16","author":"Kim","year":"2018","journal-title":"Laryngoscope"},{"key":"10.1016\/j.vetmic.2019.108564_bib0090","doi-asserted-by":"crossref","first-page":"143","DOI":"10.5483\/BMBRep.2018.51.3.017","article-title":"Regulation of the Hippo signaling pathway by ubiquitin modification","volume":"51","author":"Kim","year":"2018","journal-title":"BMB Rep."},{"key":"10.1016\/j.vetmic.2019.108564_bib0095","doi-asserted-by":"crossref","first-page":"2082","DOI":"10.1073\/pnas.96.5.2082","article-title":"Interferon-induced human MxA GTPase blocks nuclear import of Thogoto virus nucleocapsids","volume":"96","author":"Kochs","year":"1999","journal-title":"Proc. Natl. Acad. Sci."},{"key":"10.1016\/j.vetmic.2019.108564_bib0100","series-title":"Interaction of HSV-1 and PRV With Cell Surface Components During Infectious Entry","author":"Lee","year":"1993"},{"key":"10.1016\/j.vetmic.2019.108564_bib0105","doi-asserted-by":"crossref","DOI":"10.3389\/fcimb.2017.00205","article-title":"Roles of LncRNAs in viral infections","volume":"7","author":"Liu","year":"2017","journal-title":"Front. Cell. Infect. Microbiol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0110","doi-asserted-by":"crossref","first-page":"e02250","DOI":"10.1128\/JVI.02250-16","article-title":"The long noncoding RNA NEAT1 exerts antihantaviral effects by acting as positive feedback for RIG-I signaling","volume":"91","author":"Ma","year":"2017","journal-title":"J. Virol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0115","first-page":"99","article-title":"Aujeszky\u2019s disease (pseudorabies) virus: the virus and molecular pathogenesis \u2013 state of the art, June 1999","volume":"31","author":"Mettenleiter","year":"2000","journal-title":"Vet. Res."},{"key":"10.1016\/j.vetmic.2019.108564_bib0120","doi-asserted-by":"crossref","first-page":"10388","DOI":"10.1073\/pnas.1525022113","article-title":"Long noncoding RNA #32 contributes to antiviral responses by controlling interferon-stimulated gene expression","volume":"113","author":"Nishitsuji","year":"2016","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.vetmic.2019.108564_bib0125","doi-asserted-by":"crossref","DOI":"10.7554\/eLife.01749","article-title":"Multiple knockout mouse models reveal lincRNAs are required for life and brain development","volume":"2","author":"Sauvageau","year":"2013","journal-title":"eLife"},{"key":"10.1016\/j.vetmic.2019.108564_bib0130","article-title":"Long non-coding RNA expression profiling of mouse testis during postnatal development","volume":"8","author":"Sun","year":"2013","journal-title":"PLoS One"},{"key":"10.1016\/j.vetmic.2019.108564_bib0135","doi-asserted-by":"crossref","first-page":"12","DOI":"10.1111\/j.1365-2893.2012.01626.x","article-title":"A systematic analysis of the predicted human La protein targets identified a hepatitis B virus infection signature","volume":"20","author":"Tang","year":"2012","journal-title":"J. Viral Hepat."},{"key":"10.1016\/j.vetmic.2019.108564_bib0140","doi-asserted-by":"crossref","first-page":"4571","DOI":"10.1128\/JVI.72.6.4571-4579.1998","article-title":"Role of envelope protein gE endocytosis in the pseudorabies virus life cycle","volume":"72","author":"Tirabassi","year":"1998","journal-title":"J. Virol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0145","doi-asserted-by":"crossref","first-page":"511","DOI":"10.1038\/nbt.1621","article-title":"Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation","volume":"28","author":"Trapnell","year":"2010","journal-title":"Nat. Biotechnol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0150","doi-asserted-by":"crossref","first-page":"133","DOI":"10.1038\/nri1001","article-title":"Interleukin-12 and the regulation of innate resistance and adaptive immunity","volume":"3","author":"Trinchieri","year":"2003","journal-title":"Nat. Rev. Immunol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0155","doi-asserted-by":"crossref","first-page":"33947","DOI":"10.18632\/oncotarget.26103","article-title":"Hepatitis B virus promotes \u03b2-catenin-signalling and disassembly of adherens junctions in a Src kinase dependent fashion","volume":"9","author":"von Olshausen","year":"2018","journal-title":"Oncotarget"},{"key":"10.1016\/j.vetmic.2019.108564_bib0160","series-title":"CPAT: Coding-Potential Assessment Tool Using an Alignment-free Logistic Regression Model","first-page":"6","author":"Wang","year":"2013"},{"key":"10.1016\/j.vetmic.2019.108564_bib0165","doi-asserted-by":"crossref","first-page":"310","DOI":"10.1126\/science.1251456","article-title":"The STAT3-binding long noncoding RNA lnc-DC controls human dendritic cell differentiation","volume":"344","author":"Wang","year":"2014","journal-title":"Science (New York, N.Y.)"},{"key":"10.1016\/j.vetmic.2019.108564_bib0170","doi-asserted-by":"crossref","first-page":"66","DOI":"10.4161\/rna.27504","article-title":"Evidence for a crucial role of a host non-coding RNA in influenza A virus replication","volume":"11","author":"Winterling","year":"2014","journal-title":"RNA Biol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0175","doi-asserted-by":"crossref","first-page":"e00507","DOI":"10.1128\/JVI.00507-18","article-title":"Long noncoding RNA ITPRIP-1 positively regulates the innate immune response through promotion of oligomerization and activation of MDA5","volume":"92","author":"Xie","year":"2018","journal-title":"J. Virol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0180","doi-asserted-by":"crossref","DOI":"10.1186\/gb-2010-11-2-r14","article-title":"Gene ontology analysis for RNA-seq: accounting for selection bias","volume":"11","author":"Young","year":"2010","journal-title":"Genome Biol."},{"key":"10.1016\/j.vetmic.2019.108564_bib0185","doi-asserted-by":"crossref","first-page":"474","DOI":"10.1007\/s11262-016-1324-z","article-title":"Growth characteristics and complete genomic sequence analysis of a novel pseudorabies virus in China","volume":"52","author":"Yu","year":"2016","journal-title":"Virus Genes"},{"key":"10.1016\/j.vetmic.2019.108564_bib0190","doi-asserted-by":"crossref","first-page":"7208","DOI":"10.3748\/wjg.v21.i23.7208","article-title":"Long noncoding RNAs in hepatitis B virus-related hepatocellular carcinoma","volume":"21","author":"Yu","year":"2015","journal-title":"World J. Gastroenterol."}],"container-title":["Veterinary Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0378113519309800?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0378113519309800?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,10,7]],"date-time":"2025-10-07T23:05:48Z","timestamp":1759878348000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0378113519309800"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,3]]},"references-count":38,"alternative-id":["S0378113519309800"],"URL":"https:\/\/doi.org\/10.1016\/j.vetmic.2019.108564","relation":{},"ISSN":["0378-1135"],"issn-type":[{"value":"0378-1135","type":"print"}],"subject":[],"published":{"date-parts":[[2020,3]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Identification of functional lncRNAs in pseudorabies virus type II infected cells","name":"articletitle","label":"Article Title"},{"value":"Veterinary Microbiology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.vetmic.2019.108564","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2019 Elsevier B.V. All rights reserved.","name":"copyright","label":"Copyright"}],"article-number":"108564"}}