{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,26]],"date-time":"2026-06-26T03:18:47Z","timestamp":1782443927477,"version":"3.54.5"},"reference-count":35,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2023,8,1]],"date-time":"2023-08-01T00:00:00Z","timestamp":1690848000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2023,8,1]],"date-time":"2023-08-01T00:00:00Z","timestamp":1690848000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2023,8,1]],"date-time":"2023-08-01T00:00:00Z","timestamp":1690848000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2023,8,1]],"date-time":"2023-08-01T00:00:00Z","timestamp":1690848000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2023,8,1]],"date-time":"2023-08-01T00:00:00Z","timestamp":1690848000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2023,8,1]],"date-time":"2023-08-01T00:00:00Z","timestamp":1690848000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2023,8,1]],"date-time":"2023-08-01T00:00:00Z","timestamp":1690848000000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"funder":[{"DOI":"10.13039\/501100001786","name":"University of Adelaide","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001786","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001054","name":"Meat and Livestock Australia","doi-asserted-by":"publisher","award":["B.FLT.3004"],"award-info":[{"award-number":["B.FLT.3004"]}],"id":[{"id":"10.13039\/501100001054","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Veterinary Microbiology"],"published-print":{"date-parts":[[2023,8]]},"DOI":"10.1016\/j.vetmic.2023.109773","type":"journal-article","created":{"date-parts":[[2023,5,8]],"date-time":"2023-05-08T20:59:18Z","timestamp":1683579558000},"page":"109773","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":14,"special_numbering":"C","title":["Genomic profiling of Pasteurella multocida isolated from feedlot cases of bovine respiratory disease"],"prefix":"10.1016","volume":"283","author":[{"given":"Tamara","family":"Alhamami","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Piklu","family":"Roy Chowdhury","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Henrietta","family":"Venter","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tania","family":"Veltman","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alec","family":"Truswell","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sam","family":"Abraham","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sylvia A.","family":"Sapula","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mandi","family":"Carr","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Steven P.","family":"Djordjevic","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Darren J.","family":"Trott","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.vetmic.2023.109773_bib1","first-page":"9","article-title":"First emergence of resistance to macrolides and tetracycline identified in Mannheimia haemolytica and Pasteurella multocida Isolates from Beef Feedlots in Australia","author":"Alhamami","year":"2021","journal-title":"Microorganisms"},{"key":"10.1016\/j.vetmic.2023.109773_bib2","first-page":"55","article-title":"Capsular serotyping of Pasteurella multocida from various animal hosts - a comparison of phenotypic and genotypic methods","volume":"28","author":"Arumugam","year":"2011","journal-title":"Trop. Biomed."},{"key":"10.1016\/j.vetmic.2023.109773_bib3","doi-asserted-by":"crossref","first-page":"2487","DOI":"10.1128\/IAI.69.4.2487-2492.2001","article-title":"Role of capsule in the pathogenesis of fowl cholera caused by Pasteurella multocida serogroup A","volume":"69","author":"Chung","year":"2001","journal-title":"Infect. Immun."},{"key":"10.1016\/j.vetmic.2023.109773_bib4","doi-asserted-by":"crossref","first-page":"480","DOI":"10.1111\/j.1751-0813.2003.tb13367.x","article-title":"The medicine and epidemiology of bovine respiratory disease in feedlots","volume":"81","author":"Cusack","year":"2003","journal-title":"Aust. Vet. J."},{"key":"10.1016\/j.vetmic.2023.109773_bib5","doi-asserted-by":"crossref","first-page":"129","DOI":"10.1017\/S1466252307001399","article-title":"Pasteurella multocida and bovine respiratory disease","volume":"8","author":"Dabo","year":"2007","journal-title":"Anim. Health Res Rev."},{"key":"10.1016\/j.vetmic.2023.109773_bib6","doi-asserted-by":"crossref","first-page":"145","DOI":"10.1016\/j.vetmic.2003.11.013","article-title":"Characterisation of bovine strains of Pasteurella multocida and comparison with isolates of avian, ovine and porcine origin","volume":"99","author":"Davies","year":"2004","journal-title":"Vet. Microbiol"},{"key":"10.1016\/j.vetmic.2023.109773_bib7","doi-asserted-by":"crossref","first-page":"125","DOI":"10.1017\/S146625231500016X","article-title":"A literature review of antimicrobial resistance in Pathogens associated with bovine respiratory disease","volume":"16","author":"DeDonder","year":"2015","journal-title":"Anim. Health Res. Rev."},{"key":"10.1016\/j.vetmic.2023.109773_bib8","doi-asserted-by":"crossref","first-page":"304","DOI":"10.1016\/j.vetmic.2005.12.012","article-title":"Virulence genotype of Pasteurella multocida strains isolated from different hosts with various disease status","volume":"114","author":"Ewers","year":"2006","journal-title":"Vet. Microbiol"},{"key":"10.1016\/j.vetmic.2023.109773_bib9","article-title":"Hackflex: low cost Illumina sequencing library construction for high sample counts","author":"Gaio","year":"2019","journal-title":"bioRxiv"},{"key":"10.1016\/j.vetmic.2023.109773_bib10","doi-asserted-by":"crossref","DOI":"10.1016\/j.vetmic.2019.108478","article-title":"Genetic relatedness and antimicrobial resistance in respiratory bacteria from beef calves sampled from spring processing to 40 days after feedlot entry","volume":"240","author":"Guo","year":"2020","journal-title":"Vet. Microbiol."},{"key":"10.1016\/j.vetmic.2023.109773_bib11","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1111\/j.1574-6968.2006.00442.x","article-title":"Pasteurella multocida pathogenesis: 125 years after Pasteur","volume":"265","author":"Harper","year":"2006","journal-title":"FEMS Microbiol. Lett."},{"key":"10.1016\/j.vetmic.2023.109773_bib12","doi-asserted-by":"crossref","first-page":"477","DOI":"10.1128\/JCM.02824-14","article-title":"Development of a rapid multiplex PCR assay to genotype Pasteurella multocida strains by use of the lipopolysaccharide outer core biosynthesis locus","volume":"53","author":"Harper","year":"2015","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.vetmic.2023.109773_bib13","doi-asserted-by":"crossref","first-page":"115","DOI":"10.1186\/1471-2180-11-115","article-title":"Multilocus sequence typing of a global collection of Pasteurella multocida isolates from cattle and other host species demonstrates niche association","volume":"11","author":"Hotchkiss","year":"2011","journal-title":"BMC Microbiol."},{"key":"10.1016\/j.vetmic.2023.109773_bib14","doi-asserted-by":"crossref","first-page":"329","DOI":"10.1016\/j.vetmic.2011.03.018","article-title":"Molecular epidemiology of Pasteurella multocida in dairy and beef calves","volume":"151","author":"Hotchkiss","year":"2011","journal-title":"Vet. Microbiol"},{"key":"10.1016\/j.vetmic.2023.109773_bib15","doi-asserted-by":"crossref","first-page":"4785","DOI":"10.1128\/iai.61.11.4785-4792.1993","article-title":"Virulence of capsulated and noncapsulated isolates of Pasteurella multocida and their adherence to porcine respiratory tract cells and mucus","volume":"61","author":"Jacques","year":"1993","journal-title":"Infect. Immun."},{"key":"10.1016\/j.vetmic.2023.109773_bib16","doi-asserted-by":"crossref","first-page":"595","DOI":"10.1186\/1471-2105-11-595","article-title":"BIGSdb: scalable analysis of bacterial genome variation at the population level","volume":"11","author":"Jolley","year":"2010","journal-title":"BMC Bioinforma."},{"key":"10.1016\/j.vetmic.2023.109773_bib17","doi-asserted-by":"crossref","first-page":"851","DOI":"10.1093\/jac\/dky515","article-title":"Plasmid-located extended-spectrum \u03b2-lactamase gene blaROB-2 in Mannheimia haemolytica","volume":"74","author":"Kadlec","year":"2019","journal-title":"J. Antimicrob. Chemother."},{"key":"10.1016\/j.vetmic.2023.109773_bib18","doi-asserted-by":"crossref","first-page":"737","DOI":"10.1016\/j.vetmic.2013.09.029","article-title":"Virulence genes and antimicrobial susceptibility in Pasteurella multocida isolates from calves","volume":"167","author":"Katsuda","year":"2013","journal-title":"Vet. Microbiol."},{"key":"10.1016\/j.vetmic.2023.109773_bib19","doi-asserted-by":"crossref","first-page":"773","DOI":"10.1093\/jac\/dki102","article-title":"Plasmid-borne florfenicol resistance in Pasteurella multocida","volume":"55","author":"Kehrenberg","year":"2005","journal-title":"J. Antimicrob. Chemother."},{"key":"10.1016\/j.vetmic.2023.109773_bib20","doi-asserted-by":"crossref","first-page":"536","DOI":"10.3389\/fmicb.2014.00536","article-title":"Occurrence of virulence factors and antimicrobial resistance in Pasteurella multocida strains isolated from slaughter cattle in Iran","volume":"5","author":"Khamesipour","year":"2014","journal-title":"Front Microbiol."},{"key":"10.1016\/j.vetmic.2023.109773_bib21","doi-asserted-by":"crossref","first-page":"91","DOI":"10.1093\/jac\/dkr411","article-title":"ICEPmu1, an integrative conjugative element (ICE) of Pasteurella multocida: structure and transfer","volume":"67","author":"Michael","year":"2012","journal-title":"J. Antimicrob. Chemother."},{"key":"10.1016\/j.vetmic.2023.109773_bib22","first-page":"6","article-title":"Using genomics to understand inter- and intra- outbreak diversity of Pasteurella multocida isolates associated with fowl cholera in meat chickens","author":"Omaleki","year":"2020","journal-title":"Micro Genom."},{"key":"10.1016\/j.vetmic.2023.109773_bib23","doi-asserted-by":"crossref","first-page":"1408","DOI":"10.3389\/fmicb.2018.01408","article-title":"Genetic and phylogenetic characteristics of Pasteurella multocida isolates from different host species","volume":"9","author":"Peng","year":"2018","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.vetmic.2023.109773_bib24","doi-asserted-by":"crossref","first-page":"107","DOI":"10.1007\/s00203-017-1421-y","article-title":"A capsule\/lipopolysaccharide\/MLST genotype D\/L6\/ST11 of Pasteurella multocida is likely to be strongly associated with swine respiratory disease in China","volume":"200","author":"Peng","year":"2018","journal-title":"Arch. Microbiol."},{"key":"10.1016\/j.vetmic.2023.109773_bib25","doi-asserted-by":"crossref","first-page":"2419","DOI":"10.1128\/AAC.35.11.2419","article-title":"Plasmid-mediated ROB-1 beta-lactamase in Pasteurella multocida from a human specimen","volume":"35","author":"Rosenau","year":"1991","journal-title":"Antimicrob. Agents Chemother."},{"key":"10.1016\/j.vetmic.2023.109773_bib26","doi-asserted-by":"crossref","DOI":"10.1128\/mra.00890-21","article-title":"Complete genome sequence of Pasteurella multocida Sequence Type 394, isolated from a case of bovine respiratory disease in Australia","volume":"11","author":"Roy Chowdhury","year":"2022","journal-title":"Microbiol. Resour. Announc"},{"key":"10.1016\/j.vetmic.2023.109773_bib27","doi-asserted-by":"crossref","first-page":"1821","DOI":"10.2527\/jas.2008-1283","article-title":"An evaluation of bovine respiratory disease complex in feedlot cattle: Impact on performance and carcass traits using treatment records and lung lesion scores","volume":"87","author":"Schneider","year":"2009","journal-title":"J. Anim. Sci."},{"key":"10.1016\/j.vetmic.2023.109773_bib28","doi-asserted-by":"crossref","first-page":"67","DOI":"10.1017\/S146625231100003X","article-title":"A review of hemorrhagic septicemia in cattle and buffalo","volume":"12","author":"Shivachandra","year":"2011","journal-title":"Anim. Health Res. Rev."},{"key":"10.1016\/j.vetmic.2023.109773_bib29","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0249138","article-title":"Genomic diversity and molecular epidemiology of Pasteurella multocida","volume":"16","author":"Smith","year":"2021","journal-title":"PLoS One"},{"key":"10.1016\/j.vetmic.2023.109773_bib30","first-page":"1124","article-title":"Prevalence of multi drug antimicrobial resistance in isolated from high-risk stocker cattle at arrival and two weeks after processing","volume":"95","author":"Snyder","year":"2017","journal-title":"J. Anim. Sci."},{"key":"10.1016\/j.vetmic.2023.109773_bib31","doi-asserted-by":"crossref","first-page":"354","DOI":"10.1016\/j.vetmic.2010.01.017","article-title":"Development of a multi-locus sequence typing scheme for avian isolates of Pasteurella multocida","volume":"141","author":"Subaaharan","year":"2010","journal-title":"Vet. Microbiol."},{"key":"10.1016\/j.vetmic.2023.109773_bib32","doi-asserted-by":"crossref","first-page":"524","DOI":"10.1186\/s13059-014-0524-x","article-title":"The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes","volume":"15","author":"Treangen","year":"2014","journal-title":"Genome Biol."},{"key":"10.1016\/j.vetmic.2023.109773_bib33","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1016\/j.vetmic.2016.08.022","article-title":"A Pasteurella multocida strain affecting nulliparous heifers and calves in different ways","volume":"195","author":"Turni","year":"2016","journal-title":"Vet. Microbiol."},{"key":"10.1016\/j.vetmic.2023.109773_bib34","doi-asserted-by":"crossref","first-page":"12","DOI":"10.1556\/004.2018.002","article-title":"Characterisation of a multiresistant Pasteurella multocida strain isolated from cattle","volume":"66","author":"Ujv\u00e1ri","year":"2018","journal-title":"Acta Vet. Hung."},{"key":"10.1016\/j.vetmic.2023.109773_bib35","doi-asserted-by":"crossref","first-page":"631","DOI":"10.1128\/CMR.00024-13","article-title":"Pasteurella multocida: from zoonosis to cellular microbiology","volume":"26","author":"Wilson","year":"2013","journal-title":"Clin. Microbiol. Rev."}],"container-title":["Veterinary Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0378113523001256?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0378113523001256?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,10,7]],"date-time":"2025-10-07T23:20:32Z","timestamp":1759879232000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0378113523001256"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,8]]},"references-count":35,"alternative-id":["S0378113523001256"],"URL":"https:\/\/doi.org\/10.1016\/j.vetmic.2023.109773","relation":{},"ISSN":["0378-1135"],"issn-type":[{"value":"0378-1135","type":"print"}],"subject":[],"published":{"date-parts":[[2023,8]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Genomic profiling of Pasteurella multocida isolated from feedlot cases of bovine respiratory disease","name":"articletitle","label":"Article Title"},{"value":"Veterinary Microbiology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.vetmic.2023.109773","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2023 Elsevier B.V. All rights reserved.","name":"copyright","label":"Copyright"}],"article-number":"109773"}}