{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,4]],"date-time":"2026-05-04T04:59:24Z","timestamp":1777870764801,"version":"3.51.4"},"reference-count":42,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2026,4,1]],"date-time":"2026-04-01T00:00:00Z","timestamp":1775001600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,4,1]],"date-time":"2026-04-01T00:00:00Z","timestamp":1775001600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,2,10]],"date-time":"2026-02-10T00:00:00Z","timestamp":1770681600000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100008396","name":"Ministeriet for F\u00f8 devarer, Landbrug og Fiskeri","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100008396","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Veterinary Microbiology"],"published-print":{"date-parts":[[2026,4]]},"DOI":"10.1016\/j.vetmic.2026.110938","type":"journal-article","created":{"date-parts":[[2026,2,9]],"date-time":"2026-02-09T17:16:28Z","timestamp":1770657388000},"page":"110938","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"special_numbering":"C","title":["Characterization of Trueperella pyogenes strains from uterus of cow and an analysis of their phylogenic association with strains from other anatomic locations and hosts"],"prefix":"10.1016","volume":"315","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-4238-4658","authenticated-orcid":false,"given":"Henrik","family":"Christensen","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Egle","family":"Kudirkiene","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"John Elmerdahl","family":"Olsen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/j.vetmic.2026.110938_bib1","doi-asserted-by":"crossref","first-page":"455","DOI":"10.1089\/cmb.2012.0021","article-title":"SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing","volume":"19","author":"Bankevich","year":"2012","journal-title":"J. Comput. Biol."},{"key":"10.1016\/j.vetmic.2026.110938_bib2","doi-asserted-by":"crossref","first-page":"644","DOI":"10.1016\/j.tvjl.2013.09.022","article-title":"Practical use of a uterine score system for predicting effects on interval from calving to first insemination and non-return rate 56 in Danish dairy herds","volume":"198","author":"Elkjaer","year":"2013","journal-title":"Vet. J."},{"issue":"8","key":"10.1016\/j.vetmic.2026.110938_bib3","doi-asserted-by":"crossref","DOI":"10.2903\/j.efsa.2024.8912","article-title":"EFSA statement on the requirements for whole genome sequence analysis of microorganisms intentionally used in the food chain","volume":"22","author":"European Food Safety Authority (EFSA","year":"2024","journal-title":"EFSA J."},{"key":"10.1016\/j.vetmic.2026.110938_bib4","article-title":"ResFinder - an open online resource for identification of antimicrobial resistance genes in next-generation sequencing data and prediction of phenotypes from genotypes","volume":"8","author":"Florensa","year":"2022","journal-title":"Micro Genom."},{"key":"10.1016\/j.vetmic.2026.110938_bib5","doi-asserted-by":"crossref","first-page":"379","DOI":"10.1292\/jvms.22-0460","article-title":"Antimicrobial susceptibility of Trueperella pyogenes isolated from cattle and pigs with septicemia in southern Kyushu, Japan","volume":"85","author":"Fujimoto","year":"2023","journal-title":"J. Vet. Med. Sci."},{"key":"10.1016\/j.vetmic.2026.110938_bib6","doi-asserted-by":"crossref","DOI":"10.1016\/j.vetmic.2020.108593","article-title":"Antimicrobial susceptibility of Trueperella pyogenes isolated from food-producing ruminants","volume":"242","author":"Galan-Relano","year":"2020","journal-title":"Vet. Microbiol."},{"key":"10.1016\/j.vetmic.2026.110938_bib7","doi-asserted-by":"crossref","first-page":"193","DOI":"10.24425\/pjvs.2024.149349","article-title":"Determination of antimicrobial susceptibility and virulence-related genes of Trueperella pyogenes strains isolated from various clinical specimens in animals","volume":"27","author":"Gulaydin","year":"2024","journal-title":"Pol. J. Vet. Sci."},{"key":"10.1016\/j.vetmic.2026.110938_bib8","doi-asserted-by":"crossref","first-page":"1072","DOI":"10.1093\/bioinformatics\/btt086","article-title":"QUAST: quality assessment tool for genome assemblies","volume":"29","author":"Gurevich","year":"2013","journal-title":"Bioinformatics"},{"key":"10.1016\/j.vetmic.2026.110938_bib9","doi-asserted-by":"crossref","first-page":"216","DOI":"10.1016\/j.jgar.2022.09.011","article-title":"Comparative genomics of Trueperella pyogenes available in the genome database reveals multidrug resistance genomic islands","volume":"31","author":"Karthik","year":"2022","journal-title":"J. Glob. Antimicrob. Resist"},{"key":"10.1016\/j.vetmic.2026.110938_bib10","doi-asserted-by":"crossref","first-page":"343","DOI":"10.1007\/s10482-022-01806-9","article-title":"Comparative phylogenomics of Trueperella pyogenes reveals host-based distinction of strains","volume":"116","author":"Karthik","year":"2023","journal-title":"Antonie Van. Leeuwenhoek"},{"key":"10.1016\/j.vetmic.2026.110938_bib11","doi-asserted-by":"crossref","first-page":"642","DOI":"10.1016\/j.theriogenology.2016.02.016","article-title":"An investigation of the microbiota in uterine flush samples and endometrial biopsies from dairy cows during the first 7 weeks postpartum","volume":"86","author":"Knudsen","year":"2016","journal-title":"Theriogenology"},{"key":"10.1016\/j.vetmic.2026.110938_bib12","doi-asserted-by":"crossref","DOI":"10.1016\/j.vetmic.2021.109135","article-title":"Occurrence of major and minor pathogens in calves diagnosed with bovine respiratory disease","volume":"259","author":"Kudirkiene","year":"2021","journal-title":"Vet. Microbiol."},{"key":"10.1016\/j.vetmic.2026.110938_bib13","doi-asserted-by":"crossref","DOI":"10.3389\/fvets.2021.736996","article-title":"Characterization of Reproductive Microbiota of Primiparous Cows During Early Postpartum Periods in the Presence and Absence of Endometritis","volume":"8","author":"Kudo","year":"2021","journal-title":"Front Vet. Sci."},{"key":"10.1016\/j.vetmic.2026.110938_bib14","doi-asserted-by":"crossref","first-page":"1870","DOI":"10.1093\/molbev\/msw054","article-title":"MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets","volume":"33","author":"Kumar","year":"2016","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/j.vetmic.2026.110938_bib15","doi-asserted-by":"crossref","first-page":"4230","DOI":"10.3390\/ijms21124230","article-title":"New determinants of aminoglycoside resistance and their association with the class 1 integron gene cassettes in trueperella pyogenes","volume":"21","author":"Kwiecien","year":"2020","journal-title":"Int. J. Mol. Sci."},{"issue":"W1","key":"10.1016\/j.vetmic.2026.110938_bib16","doi-asserted-by":"crossref","first-page":"W78","DOI":"10.1093\/nar\/gkae268","article-title":"Interactive Tree of Life (iTOL) v6: recent updates to the phylogenetic tree display and annotation tool","volume":"52","author":"Letunic","year":"2024","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.vetmic.2026.110938_bib17","doi-asserted-by":"crossref","first-page":"3974","DOI":"10.3390\/ijms25073974","article-title":"Phenotypic characteristics, antimicrobial susceptibility and virulence genotype features of trueperella pyogenes associated with endometritis of dairy cows","volume":"25","author":"Liu","year":"2024","journal-title":"Int. J. Mol. Sci."},{"key":"10.1016\/j.vetmic.2026.110938_bib18","doi-asserted-by":"crossref","first-page":"3659","DOI":"10.3168\/jds.2008-1756","article-title":"Identification, susceptibility, and detection of integron-gene cassettes of Arcanobacterium pyogenes in bovine endometritis","volume":"92","author":"Liu","year":"2009","journal-title":"J. Dairy Sci."},{"key":"10.1016\/j.vetmic.2026.110938_bib19","doi-asserted-by":"crossref","DOI":"10.1128\/genomeA.00400-14","article-title":"Complete Genome Sequence of Trueperella pyogenes, an Important Opportunistic Pathogen of Livestock","volume":"2","author":"Machado","year":"2014","journal-title":"Genome Announc"},{"key":"10.1016\/j.vetmic.2026.110938_bib20","doi-asserted-by":"crossref","DOI":"10.1128\/aem.01725-24","article-title":"Genomic and metabolic characterization of Trueperella pyogenes isolated from domestic and wild animals","volume":"91","author":"Magossi","year":"2025","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.vetmic.2026.110938_bib21","doi-asserted-by":"crossref","DOI":"10.1016\/j.vetmic.2024.110102","article-title":"Whole genome-based antimicrobial resistance, virulence, and phylogenetic characteristics of Trueperella pyogenes clinical isolates from humans and animals","volume":"294","author":"Marchionatti","year":"2024","journal-title":"Vet. Microbiol."},{"key":"10.1016\/j.vetmic.2026.110938_bib22","doi-asserted-by":"crossref","DOI":"10.1128\/mra.00865-22","article-title":"Whole-genome sequences of antibiotic-resistant trueperella pyogenes isolates from surgical site infections in dairy cows in Switzerland","volume":"11","author":"Marchionatti","year":"2022","journal-title":"Microbiol. Resour. Announc"},{"issue":"4","key":"10.1016\/j.vetmic.2026.110938_bib23","doi-asserted-by":"crossref","DOI":"10.1128\/msphere.00239-23","article-title":"Novel macrolide-lincosamide-streptogramin B resistance gene erm(56) in Trueperella pyogenes","volume":"8","author":"Marchionatti","year":"2023","journal-title":"mSphere"},{"key":"10.1016\/j.vetmic.2026.110938_bib24","doi-asserted-by":"crossref","first-page":"79","DOI":"10.1186\/s13028-016-0257-9","article-title":"A longitudinal cohort study of acute puerperal metritis cases in Swedish dairy cows","volume":"58","author":"Ordell","year":"2016","journal-title":"Acta Vet. Scand."},{"key":"10.1016\/j.vetmic.2026.110938_bib25","doi-asserted-by":"crossref","first-page":"3691","DOI":"10.1093\/bioinformatics\/btv421","article-title":"Roary: rapid large-scale prokaryote pan genome analysis","volume":"31","author":"Page","year":"2015","journal-title":"Bioinformatics"},{"key":"10.1016\/j.vetmic.2026.110938_bib26","doi-asserted-by":"crossref","first-page":"3380","DOI":"10.1099\/mic.0.2007\/009100-0","article-title":"Functional and structural properties of CbpA, a collagen-binding protein from Arcanobacterium pyogenes","volume":"153","author":"Pietrocola","year":"2007","journal-title":"Microbiol."},{"key":"10.1016\/j.vetmic.2026.110938_bib27","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0009490","article-title":"FastTree 2--approximately maximum-likelihood trees for large alignments","volume":"5","author":"Price","year":"2010","journal-title":"PLoS One"},{"key":"10.1016\/j.vetmic.2026.110938_bib28","doi-asserted-by":"crossref","first-page":"939","DOI":"10.1007\/s42770-021-00422-5","article-title":"Trueperella pyogenes pyolysin inhibits lipopolysaccharide-induced inflammatory response in endometrium stromal cells via autophagy- and ATF6-dependent mechanism","volume":"52","author":"Qi","year":"2021","journal-title":"Braz. J. Microbiol."},{"key":"10.1016\/j.vetmic.2026.110938_bib29","first-page":"674","article-title":"The pathogenic synergy of Fusiformis necrophorus and Corynebacterium pyogenes. II. The response of F. necrophorus to a filterable product of C. pyogenes","volume":"48","author":"Roberts","year":"1967","journal-title":"Br. J. Exp. Pathol."},{"key":"10.1016\/j.vetmic.2026.110938_bib30","doi-asserted-by":"crossref","first-page":"2737","DOI":"10.3390\/ijms20112737","article-title":"Pathogenicity and virulence of Trueperella pyogenes: a review","volume":"20","author":"Rzewuska","year":"2019","journal-title":"Int. J. Mol. Sci."},{"key":"10.1016\/j.vetmic.2026.110938_bib31","doi-asserted-by":"crossref","first-page":"D20","DOI":"10.1093\/nar\/gkae979","article-title":"Database resources of the National Center for Biotechnology Information in 2025","volume":"53","author":"Sayers","year":"2025","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.vetmic.2026.110938_bib32","doi-asserted-by":"crossref","first-page":"2068","DOI":"10.1093\/bioinformatics\/btu153","article-title":"Prokka: rapid prokaryotic genome annotation","volume":"30","author":"Seemann","year":"2014","journal-title":"Bioinformatics"},{"issue":"10","key":"10.1016\/j.vetmic.2026.110938_bib33","doi-asserted-by":"crossref","first-page":"1744","DOI":"10.1016\/j.chom.2024.08.017","article-title":"Pangenomes of human gut microbiota uncover links between genetic diversity and stress response","volume":"32","author":"Shoer","year":"2024","journal-title":"Cell Host Microbe."},{"key":"10.1016\/j.vetmic.2026.110938_bib34","doi-asserted-by":"crossref","first-page":"821","DOI":"10.1186\/s12879-023-08810-y","article-title":"Trueperella pyogenes endocarditis in a Swiss farmer: a case report and review of the literature","volume":"23","author":"Stuby","year":"2023","journal-title":"BMC Infect. Dis."},{"key":"10.1016\/j.vetmic.2026.110938_bib35","doi-asserted-by":"crossref","first-page":"405","DOI":"10.3390\/pathogens14050405","article-title":"Determination of minimum inhibitory concentrations of selected antibiotics against trueperella pyogenes originated from bovine clinical endometritis","volume":"14","author":"Szenci","year":"2025","journal-title":"Pathogens"},{"key":"10.1016\/j.vetmic.2026.110938_bib36","doi-asserted-by":"crossref","first-page":"24","DOI":"10.3390\/antibiotics12010024","article-title":"Comparative genome analysis of 19 Trueperella pyogenes strains originating from different animal species reveal a genetically diverse open pan-genome","volume":"12","author":"Thakur","year":"2022","journal-title":"Antibiot."},{"key":"10.1016\/j.vetmic.2026.110938_bib37","first-page":"2964","article-title":"Prevalence, virulence genes, drug resistance and genetic evolution of trueperella pyogenes in small ruminants in Western China","volume":"14","author":"Wei","year":"2024","journal-title":"Anim."},{"key":"10.1016\/j.vetmic.2026.110938_bib38","doi-asserted-by":"crossref","first-page":"534","DOI":"10.3390\/pathogens13070534","article-title":"Trueperella pyogenes-strain diversity and occurrence in dairy herds","volume":"13","author":"Wente","year":"2024","journal-title":"Pathogens"},{"key":"10.1016\/j.vetmic.2026.110938_bib39","doi-asserted-by":"crossref","first-page":"102","DOI":"10.1016\/j.theriogenology.2004.03.017","article-title":"Clinical evaluation of postpartum vaginal mucus reflects uterine bacterial infection and the immune response in cattle","volume":"63","author":"Williams","year":"2005","journal-title":"Theriogenology"},{"key":"10.1016\/j.vetmic.2026.110938_bib40","first-page":"469","article-title":"Genotypic and phenotypic tetracycline-based properties of Trueperella pyogenes isolates from bovine samples","volume":"13","author":"Yapicier","year":"2022","journal-title":"Vet. Res. Forum"},{"key":"10.1016\/j.vetmic.2026.110938_bib41","doi-asserted-by":"crossref","first-page":"1265","DOI":"10.1099\/ijs.0.020032-0","article-title":"Comparative chemotaxonomic and phylogenetic studies on the genus Arcanobacterium Collins et al. 1982 emend. Lehnen et al. 2006: proposal for Trueperella gen. nov. and emended description of the genus Arcanobacterium","volume":"61","author":"Yassin","year":"2011","journal-title":"Int. J. Syst. Evol. Microbiol."},{"key":"10.1016\/j.vetmic.2026.110938_bib42","doi-asserted-by":"crossref","first-page":"153","DOI":"10.1016\/j.vetmic.2012.07.018","article-title":"Genotypic characterization and evaluation of an antibiotic resistance of Trueperella pyogenes (Arcanobacterium pyogenes) isolated from milk of dairy cows with clinical mastitis","volume":"161","author":"Zastempowska","year":"2012","journal-title":"Vet. Microbiol."}],"container-title":["Veterinary Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0378113526000696?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0378113526000696?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,4,30]],"date-time":"2026-04-30T16:39:35Z","timestamp":1777567175000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0378113526000696"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,4]]},"references-count":42,"alternative-id":["S0378113526000696"],"URL":"https:\/\/doi.org\/10.1016\/j.vetmic.2026.110938","relation":{},"ISSN":["0378-1135"],"issn-type":[{"value":"0378-1135","type":"print"}],"subject":[],"published":{"date-parts":[[2026,4]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Characterization of Trueperella pyogenes strains from uterus of cow and an analysis of their phylogenic association with strains from other anatomic locations and hosts","name":"articletitle","label":"Article Title"},{"value":"Veterinary Microbiology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.vetmic.2026.110938","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 The Authors. Published by Elsevier B.V.","name":"copyright","label":"Copyright"}],"article-number":"110938"}}