{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,5]],"date-time":"2026-10-05T13:28:26Z","timestamp":1791206906114,"version":"4.1.0"},"reference-count":52,"publisher":"Elsevier BV","issue":"1","license":[{"start":{"date-parts":[[2010,11,1]],"date-time":"2010-11-01T00:00:00Z","timestamp":1288569600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2010,11,1]],"date-time":"2010-11-01T00:00:00Z","timestamp":1288569600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2013,7,17]],"date-time":"2013-07-17T00:00:00Z","timestamp":1374019200000},"content-version":"vor","delay-in-days":989,"URL":"http:\/\/www.elsevier.com\/open-access\/userlicense\/1.0\/"}],"content-domain":{"domain":["clinicalkey.com","clinicalkey.com.au","clinicalkey.es","clinicalkey.fr","clinicalkey.jp","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Virology"],"published-print":{"date-parts":[[2010,11]]},"DOI":"10.1016\/j.virol.2010.07.048","type":"journal-article","created":{"date-parts":[[2010,8,22]],"date-time":"2010-08-22T04:28:54Z","timestamp":1282451334000},"page":"43-52","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":30,"title":["Insights into the infective properties of Ypf\u03a6, the Yersinia pestis filamentous phage"],"prefix":"10.1016","volume":"407","author":[{"given":"Iman","family":"Chouikha","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lucie","family":"Charrier","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sofia","family":"Filali","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Anne","family":"Derbise","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Elisabeth","family":"Carniel","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.virol.2010.07.048_bb0005","doi-asserted-by":"crossref","first-page":"14043","DOI":"10.1073\/pnas.96.24.14043","article-title":"Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis","volume":"96","author":"Achtman","year":"1999","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.virol.2010.07.048_bb0010","doi-asserted-by":"crossref","first-page":"17837","DOI":"10.1073\/pnas.0408026101","article-title":"Microevolution and history of the plague bacillus, Yersinia pestis","volume":"101","author":"Achtman","year":"2004","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.virol.2010.07.048_bb0015","doi-asserted-by":"crossref","first-page":"762","DOI":"10.1101\/gad.10.6.762","article-title":"Determinants of selectivity in Xer site-specific recombination","volume":"10","author":"Blakely","year":"1996","journal-title":"Genes Dev."},{"key":"10.1016\/j.virol.2010.07.048_bb0020","doi-asserted-by":"crossref","first-page":"351","DOI":"10.1016\/0092-8674(93)80076-Q","article-title":"Two related recombinases are required for site-specific recombination at dif and cer in E. coli K12","volume":"75","author":"Blakely","year":"1993","journal-title":"Cell"},{"key":"10.1016\/j.virol.2010.07.048_bb0025","doi-asserted-by":"crossref","first-page":"309","DOI":"10.1128\/CMR.4.3.309","article-title":"Factors promoting acute and chronic diseases caused by yersiniae","volume":"4","author":"Brubaker","year":"1991","journal-title":"Clin. Microbiol. Rev."},{"key":"10.1016\/j.virol.2010.07.048_bb0030","doi-asserted-by":"crossref","first-page":"5685","DOI":"10.1128\/JB.185.19.5685-5696.2003","article-title":"VGJ phi, a novel filamentous phage of Vibrio cholerae, integrates into the same chromosomal site as CTX phi","volume":"185","author":"Campos","year":"2003","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.virol.2010.07.048_bb0035","doi-asserted-by":"crossref","first-page":"13826","DOI":"10.1073\/pnas.0404012101","article-title":"Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis","volume":"101","author":"Chain","year":"2004","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.virol.2010.07.048_bb0040","doi-asserted-by":"crossref","first-page":"5094","DOI":"10.1128\/JB.180.19.5094-5101.1998","article-title":"Filamentous bacteriophages of Vibrio parahaemolyticus as a possible clue to genetic transmission","volume":"180","author":"Chang","year":"1998","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.virol.2010.07.048_bb0045","doi-asserted-by":"crossref","first-page":"6196","DOI":"10.1128\/IAI.70.11.6196-6205.2002","article-title":"Yersinia pseudotuberculosis harbors a type IV pilus gene cluster that contributes to pathogenicity","volume":"70","author":"Collyn","year":"2002","journal-title":"Infect. Immun."},{"key":"10.1016\/j.virol.2010.07.048_bb0050","doi-asserted-by":"crossref","first-page":"445","DOI":"10.1016\/0042-6822(84)90049-7","article-title":"Gene-III protein of filamentous phages: evidence for a carboxyl-terminal domain with a role in morphogenesis","volume":"132","author":"Crissman","year":"1984","journal-title":"Virology"},{"key":"10.1016\/j.virol.2010.07.048_bb0055","doi-asserted-by":"crossref","first-page":"8572","DOI":"10.1073\/pnas.140109997","article-title":"CTXphi contains a hybrid genome derived from tandemly integrated elements","volume":"97","author":"Davis","year":"2000","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.virol.2010.07.048_bb0060","doi-asserted-by":"crossref","first-page":"35","DOI":"10.1016\/S1369-5274(02)00005-X","article-title":"Filamentous phages linked to virulence of Vibrio cholerae","volume":"6","author":"Davis","year":"2003","journal-title":"Curr. Opin. Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0065","doi-asserted-by":"crossref","first-page":"6779","DOI":"10.1128\/JB.181.21.6779-6787.1999","article-title":"The Vibrio cholerae O139 Calcutta bacteriophage CTXphi is infectious and encodes a novel repressor","volume":"181","author":"Davis","year":"1999","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.virol.2010.07.048_bb0070","doi-asserted-by":"crossref","first-page":"4240","DOI":"10.1093\/emboj\/cdf427","article-title":"A satellite phage-encoded antirepressor induces repressor aggregation and cholera toxin gene transfer","volume":"21","author":"Davis","year":"2002","journal-title":"EMBO J."},{"key":"10.1016\/j.virol.2010.07.048_bb0075","doi-asserted-by":"crossref","first-page":"271","DOI":"10.1006\/viro.1998.9509","article-title":"Interaction of the globular domains of pIII protein of filamentous bacteriophage fd with the F-pilus of Escherichia coli","volume":"253","author":"Deng","year":"1999","journal-title":"Virology"},{"key":"10.1016\/j.virol.2010.07.048_bb0080","doi-asserted-by":"crossref","first-page":"113","DOI":"10.1016\/S0928-8244(03)00181-0","article-title":"A rapid and simple method for inactivating chromosomal genes in Yersinia","volume":"38","author":"Derbise","year":"2003","journal-title":"FEMS Immunol. Med. Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0085","doi-asserted-by":"crossref","first-page":"1145","DOI":"10.1111\/j.1365-2958.2006.05570.x","article-title":"A horizontally acquired filamentous phage contributes to the pathogenicity of the plague bacillus","volume":"63","author":"Derbise","year":"2007","journal-title":"Mol. Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0090","doi-asserted-by":"crossref","first-page":"5421","DOI":"10.1073\/pnas.78.9.5421","article-title":"Gene II of phage f1: its functions and its products","volume":"78","author":"Dotto","year":"1981","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.virol.2010.07.048_bb0095","doi-asserted-by":"crossref","first-page":"505","DOI":"10.1016\/j.tim.2003.09.003","article-title":"Pathogenicity islands and phages in Vibrio cholerae evolution","volume":"11","author":"Faruque","year":"2003","journal-title":"Trends Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0100","doi-asserted-by":"crossref","first-page":"6050","DOI":"10.1128\/JB.184.21.6050-6055.2002","article-title":"Conserved filamentous prophage in Escherichia coli O18:K1:H7 and Yersinia pestis biovar orientalis","volume":"184","author":"Gonzalez","year":"2002","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.virol.2010.07.048_bb0105","doi-asserted-by":"crossref","first-page":"634","DOI":"10.1128\/jcm.32.3.634-641.1994","article-title":"Plague pandemics investigated by ribotyping of Yersinia pestis strains","volume":"32","author":"Guiyoule","year":"1994","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0110","doi-asserted-by":"crossref","first-page":"1017","DOI":"10.1006\/jmbi.1999.3227","article-title":"The pI and pXI assembly proteins serve separate and essential roles in filamentous phage assembly","volume":"293","author":"Haigh","year":"1999","journal-title":"J. Mol. Biol."},{"key":"10.1016\/j.virol.2010.07.048_bb0115","doi-asserted-by":"crossref","first-page":"2018","DOI":"10.1101\/gr.1507303","article-title":"Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis","volume":"13","author":"Hinchliffe","year":"2003","journal-title":"Genome Res."},{"key":"10.1016\/j.virol.2010.07.048_bb0120","doi-asserted-by":"crossref","first-page":"656","DOI":"10.1038\/nature00782","article-title":"Filamentous phage integration requires the host recombinases XerC and XerD","volume":"417","author":"Huber","year":"2002","journal-title":"Nature"},{"key":"10.1016\/j.virol.2010.07.048_bb0125","doi-asserted-by":"crossref","first-page":"4933","DOI":"10.1128\/JB.184.17.4933-4935.2002","article-title":"Filamentous bacteriophages of vibrios are integrated into the dif-like site of the host chromosome","volume":"184","author":"Iida","year":"2002","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.virol.2010.07.048_bb0130","doi-asserted-by":"crossref","first-page":"835","DOI":"10.1128\/jvi.10.4.835-843.1972","article-title":"Role of F pili in the penetration of bacteriophage fl","volume":"10","author":"Jacobson","year":"1972","journal-title":"J. Virol."},{"key":"10.1016\/j.virol.2010.07.048_bb0135","doi-asserted-by":"crossref","first-page":"2535","DOI":"10.1128\/IAI.66.6.2535-2539.1998","article-title":"The Vibrio cholerae mannose-sensitive hemagglutinin is the receptor for a filamentous bacteriophage from V. cholerae O139","volume":"66","author":"Jouravleva","year":"1998","journal-title":"Infect. Immun."},{"key":"10.1016\/j.virol.2010.07.048_bb0140","doi-asserted-by":"crossref","first-page":"7035","DOI":"10.1073\/pnas.95.12.7035","article-title":"CTXphi immunity: application in the development of cholera vaccines","volume":"95","author":"Kimsey","year":"1998","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.virol.2010.07.048_bb0145","doi-asserted-by":"crossref","first-page":"3352","DOI":"10.1128\/JB.187.10.3352-3358.2005","article-title":"Horizontal transfer of the high-pathogenicity island of Yersinia pseudotuberculosis","volume":"187","author":"Lesic","year":"2005","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.virol.2010.07.048_bb0150","doi-asserted-by":"crossref","first-page":"1151","DOI":"10.1111\/j.1365-2958.2004.04356.x","article-title":"Genetic recombination and the cell cycle: what we have learned from chromosome dimers","volume":"54","author":"Lesterlin","year":"2004","journal-title":"Mol. Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0155","doi-asserted-by":"crossref","first-page":"e2166","DOI":"10.1371\/journal.pone.0002166","article-title":"Different region analysis for genotyping Yersinia pestis isolates from China","volume":"3","author":"Li","year":"2008","journal-title":"PLoS ONE"},{"key":"10.1016\/j.virol.2010.07.048_bb0160","doi-asserted-by":"crossref","first-page":"12","DOI":"10.1006\/bbrc.1996.0003","article-title":"A region of the filamentous phage phi Lf genome that can support autonomous replication and miniphage production","volume":"218","author":"Lin","year":"1996","journal-title":"Biochem. Biophys. Res. Commun."},{"key":"10.1016\/j.virol.2010.07.048_bb0165","doi-asserted-by":"crossref","first-page":"425","DOI":"10.1007\/s004380100532","article-title":"Plasmids carrying cloned fragments of RF DNA from the filamentous phage (phi)Lf can be integrated into the host chromosome via site-specific integration and homologous recombination","volume":"266","author":"Lin","year":"2001","journal-title":"Mol. Genet. Genomics"},{"key":"10.1016\/j.virol.2010.07.048_bb0170","doi-asserted-by":"crossref","first-page":"311","DOI":"10.1111\/j.1365-2958.1993.tb01575.x","article-title":"Yersinia pestis pH 6 antigen forms fimbriae and is induced by intracellular association with macrophages","volume":"8","author":"Lindler","year":"1993","journal-title":"Mol. Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0175","doi-asserted-by":"crossref","first-page":"3297","DOI":"10.1128\/JCM.36.11.3297-3302.1998","article-title":"Genetic heterogeneity of clinical strains of Yersinia enterocolitica traced by ribotyping and relationships between ribotypes, serotypes, and biotypes","volume":"36","author":"Lobato","year":"1998","journal-title":"J. Clin. Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0180","doi-asserted-by":"crossref","first-page":"150","DOI":"10.1016\/S0959-440X(98)80032-8","article-title":"Filamentous phage structure, infection and assembly","volume":"8","author":"Marvin","year":"1998","journal-title":"Curr. Opin. Struct. Biol."},{"key":"10.1016\/j.virol.2010.07.048_bb0185","doi-asserted-by":"crossref","first-page":"935","DOI":"10.1111\/j.1365-2958.2004.04309.x","article-title":"Characterization of XerC- and XerD-dependent CTX phage integration in Vibrio cholerae","volume":"54","author":"McLeod","year":"2004","journal-title":"Mol. Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0190","doi-asserted-by":"crossref","first-page":"253","DOI":"10.1016\/0092-8674(83)90228-3","article-title":"Duplication and amplification of toxin genes in Vibrio cholerae","volume":"35","author":"Mekalanos","year":"1983","journal-title":"Cell"},{"key":"10.1016\/j.virol.2010.07.048_bb0195","doi-asserted-by":"crossref","first-page":"795","DOI":"10.1016\/S0092-8674(00)81986-8","article-title":"Modulation of horizontal gene transfer in pathogenic bacteria by in vivo signals","volume":"87","author":"Mel","year":"1996","journal-title":"Cell"},{"key":"10.1016\/j.virol.2010.07.048_bb0200","doi-asserted-by":"crossref","first-page":"12636","DOI":"10.1016\/S0021-9258(19)86361-5","article-title":"Bacteriophage fd gene II-protein. I. Purification, involvement in RF replication, and the expression of gene II","volume":"254","author":"Meyer","year":"1979","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.virol.2010.07.048_bb0205","doi-asserted-by":"crossref","first-page":"12642","DOI":"10.1016\/S0021-9258(19)86362-7","article-title":"Bacteriophage fd gene II-protein. II. Specific cleavage and relaxation of supercoiled RF from filamentous phages","volume":"254","author":"Meyer","year":"1979","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.virol.2010.07.048_bb0210","first-page":"375","article-title":"Filamentous bacteriophages","volume":"vol. 2","author":"Model","year":"1988"},{"key":"10.1016\/j.virol.2010.07.048_bb0215","doi-asserted-by":"crossref","first-page":"3750","DOI":"10.1073\/pnas.90.8.3750","article-title":"CTX genetic element encodes a site-specific recombination system and an intestinal colonization factor","volume":"90","author":"Pearson","year":"1993","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.virol.2010.07.048_bb0220","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1006\/jmbi.1998.2006","article-title":"Roles of pIII in filamentous phage assembly","volume":"282","author":"Rakonjac","year":"1998","journal-title":"J. Mol. Biol."},{"key":"10.1016\/j.virol.2010.07.048_bb0225","doi-asserted-by":"crossref","first-page":"627","DOI":"10.1006\/jmbi.1995.0247","article-title":"The products of gene I and the overlapping in-frame gene XI are required for filamentous phage assembly","volume":"248","author":"Rapoza","year":"1995","journal-title":"J. Mol. Biol."},{"key":"10.1016\/j.virol.2010.07.048_bb0230","doi-asserted-by":"crossref","first-page":"223","DOI":"10.1016\/S0966-842X(00)88929-5","article-title":"Moving through the membrane with filamentous phages","volume":"3","author":"Russel","year":"1995","journal-title":"Trends Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0235","doi-asserted-by":"crossref","first-page":"5312","DOI":"10.1128\/jb.170.11.5312-5316.1988","article-title":"Low-frequency infection of F-bacteria by transducing particles of filamentous bacteriophages","volume":"170","author":"Russel","year":"1988","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.virol.2010.07.048_bb0240","doi-asserted-by":"crossref","first-page":"e206","DOI":"10.1371\/journal.pgen.0020206","article-title":"The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081","volume":"2","author":"Thomson","year":"2006","journal-title":"PLoS Genet."},{"key":"10.1016\/j.virol.2010.07.048_bb0245","doi-asserted-by":"crossref","first-page":"559","DOI":"10.1016\/j.molcel.2005.07.002","article-title":"The single-stranded genome of phage CTX is the form used for integration into the genome of Vibrio cholerae","volume":"19","author":"Val","year":"2005","journal-title":"Mol. Cell"},{"key":"10.1016\/j.virol.2010.07.048_bb0250","doi-asserted-by":"crossref","first-page":"1910","DOI":"10.1126\/science.272.5270.1910","article-title":"Lysogenic conversion by a filamentous phage encoding cholera toxin","volume":"272","author":"Waldor","year":"1996","journal-title":"Science"},{"key":"10.1016\/j.virol.2010.07.048_bb0255","doi-asserted-by":"crossref","first-page":"917","DOI":"10.1046\/j.1365-2958.1997.3911758.x","article-title":"Regulation, replication, and integration functions of the Vibrio cholerae CTXphi are encoded by region RS2","volume":"24","author":"Waldor","year":"1997","journal-title":"Mol. Microbiol."},{"key":"10.1016\/j.virol.2010.07.048_bb0260","doi-asserted-by":"crossref","first-page":"15","DOI":"10.1099\/0022-1317-75-1-15","article-title":"Nucleotide sequence determination, characterization and purification of the single-stranded DNA-binding protein and major coat protein of filamentous phage phi Lf of Xanthomonas campestris pv. campestris","volume":"75","author":"Wen","year":"1994","journal-title":"J. Gen. Virol."}],"container-title":["Virology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0042682210005064?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0042682210005064?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,9,23]],"date-time":"2025-09-23T00:08:22Z","timestamp":1758586102000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0042682210005064"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2010,11]]},"references-count":52,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2010,11]]}},"alternative-id":["S0042682210005064"],"URL":"https:\/\/doi.org\/10.1016\/j.virol.2010.07.048","relation":{},"ISSN":["0042-6822"],"issn-type":[{"value":"0042-6822","type":"print"}],"subject":[],"published":{"date-parts":[[2010,11]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Insights into the infective properties of Ypf\u03a6, the Yersinia pestis filamentous phage","name":"articletitle","label":"Article Title"},{"value":"Virology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.virol.2010.07.048","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"Copyright \u00a9 2010 Elsevier Inc. All rights reserved.","name":"copyright","label":"Copyright"}]}}