{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,28]],"date-time":"2026-09-28T17:48:27Z","timestamp":1790617707700,"version":"4.1.0"},"reference-count":67,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2015,2,1]],"date-time":"2015-02-01T00:00:00Z","timestamp":1422748800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Water Research"],"published-print":{"date-parts":[[2015,2]]},"DOI":"10.1016\/j.watres.2014.11.003","type":"journal-article","created":{"date-parts":[[2014,11,16]],"date-time":"2014-11-16T23:36:32Z","timestamp":1416180992000},"page":"30-39","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":58,"special_numbering":"C","title":["Changes in bacterial and eukaryotic communities during sewage decomposition in Mississippi river water"],"prefix":"10.1016","volume":"69","author":[{"given":"Asja","family":"Korajkic","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Laura Wegener","family":"Parfrey","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Brian R.","family":"McMinn","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yoshiki Vazquez","family":"Baeza","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Will","family":"VanTeuren","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rob","family":"Knight","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Orin C.","family":"Shanks","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"issue":"23","key":"10.1016\/j.watres.2014.11.003_bib1","doi-asserted-by":"crossref","first-page":"7122","DOI":"10.1021\/es060327l","article-title":"Campylobacter in waterfowl and aquatic environments: incidence and methods of detection","volume":"40","author":"Abulreesh","year":"2006","journal-title":"Environ. Sci. Technol."},{"issue":"6","key":"10.1016\/j.watres.2014.11.003_bib2","doi-asserted-by":"crossref","first-page":"1071","DOI":"10.1007\/s12275-012-2642-z","article-title":"Effects of PCR cycle number and DNA polymerase type on the 16S rRNA gene pyrosequencing analysis of bacterial communities","volume":"50","author":"Ahn","year":"2012","journal-title":"J. Microbiol."},{"key":"10.1016\/j.watres.2014.11.003_bib3","article-title":"Free-living waterfowl as a source of Zoonotic bacteria in a Dense Wild bird population Area in Northeastern Spain","author":"Antilles","year":"2013","journal-title":"Transbound. Emerg. Dis."},{"issue":"19","key":"10.1016\/j.watres.2014.11.003_bib4","doi-asserted-by":"crossref","first-page":"4850","DOI":"10.1016\/j.watres.2009.06.053","article-title":"Rapid decay of host-specific fecal Bacteroidales cells in seawater as measured by quantitative PCR with propidium monoazide","volume":"43","author":"Bae","year":"2009","journal-title":"Water Res."},{"key":"10.1016\/j.watres.2014.11.003_bib5","doi-asserted-by":"crossref","first-page":"291","DOI":"10.1093\/sysbio\/syr010","article-title":"Performance, accuracy, and Web server for evolutionary placement of short sequence reads under maximum likelihood","volume":"60","author":"Berger","year":"2011","journal-title":"Syst. Biol."},{"issue":"1","key":"10.1016\/j.watres.2014.11.003_bib6","doi-asserted-by":"crossref","first-page":"57","DOI":"10.1038\/nmeth.2276","article-title":"Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing","volume":"10","author":"Bokulich","year":"2013","journal-title":"Nat. Methods"},{"issue":"18","key":"10.1016\/j.watres.2014.11.003_bib7","doi-asserted-by":"crossref","first-page":"6862","DOI":"10.1016\/j.watres.2013.02.061","article-title":"Evaluation of molecular community analysis methods for discerning fecal sources and human waste","volume":"47","author":"Cao","year":"2013","journal-title":"Water Res."},{"issue":"5","key":"10.1016\/j.watres.2014.11.003_bib8","doi-asserted-by":"crossref","first-page":"335","DOI":"10.1038\/nmeth.f.303","article-title":"QIIME allows analysis of high-throughput community sequencing data","volume":"7","author":"Caporaso","year":"2010","journal-title":"Nat. Methods"},{"issue":"8","key":"10.1016\/j.watres.2014.11.003_bib9","doi-asserted-by":"crossref","first-page":"1621","DOI":"10.1038\/ismej.2012.8","article-title":"Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms","volume":"6","author":"Caporaso","year":"2012","journal-title":"ISME J."},{"issue":"Suppl. 1","key":"10.1016\/j.watres.2014.11.003_bib10","doi-asserted-by":"crossref","first-page":"4516","DOI":"10.1073\/pnas.1000080107","article-title":"Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample","volume":"108","author":"Caporaso","year":"2011","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/j.watres.2014.11.003_bib11","series-title":"PRIMER V6: User Manual\/Tutorial","author":"Clarke","year":"2006"},{"issue":"Database issue","key":"10.1016\/j.watres.2014.11.003_bib12","doi-asserted-by":"crossref","first-page":"D141","DOI":"10.1093\/nar\/gkn879","article-title":"The Ribosomal Database Project: improved alignments and new tools for rRNA analysis","volume":"37","author":"Cole","year":"2009","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.watres.2014.11.003_bib13","doi-asserted-by":"crossref","first-page":"127","DOI":"10.2307\/2401669","article-title":"The feeding habits and growth rates of some fresh-water ciliates found in activated-sludge plants","volume":"3","author":"Curds","year":"1966","journal-title":"J. Appl. Ecol."},{"issue":"7","key":"10.1016\/j.watres.2014.11.003_bib14","doi-asserted-by":"crossref","first-page":"5069","DOI":"10.1128\/AEM.03006-05","article-title":"Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB","volume":"72","author":"DeSantis","year":"2006","journal-title":"Appl. Environ. Microbiol."},{"issue":"10","key":"10.1016\/j.watres.2014.11.003_bib15","doi-asserted-by":"crossref","first-page":"3255","DOI":"10.1128\/AEM.02636-09","article-title":"Relative decay of Bacteroidales microbial source tracking markers and cultivated Escherichia coli in freshwater microcosms","volume":"76","author":"Dick","year":"2010","journal-title":"Appl. Environ. Microbiol."},{"issue":"4","key":"10.1016\/j.watres.2014.11.003_bib16","doi-asserted-by":"crossref","first-page":"287","DOI":"10.1016\/j.ejop.2011.06.001","article-title":"Limitation of sludge biotic index application for control of a wastewater treatment plant working with shock organic and ammonium loadings","volume":"47","author":"Drzewicki","year":"2011","journal-title":"Eur. J. Protistol."},{"issue":"4","key":"10.1016\/j.watres.2014.11.003_bib17","doi-asserted-by":"crossref","first-page":"274","DOI":"10.1016\/j.ejop.2011.05.001","article-title":"The influence of fundamental design parameters on ciliates community structure in Irish activated sludge systems","volume":"47","author":"Dubber","year":"2011","journal-title":"Eur. J. Protistol."},{"key":"10.1016\/j.watres.2014.11.003_bib18","doi-asserted-by":"crossref","first-page":"99","DOI":"10.2174\/1874285801307010099","article-title":"Microbial community structure across a wastewater-impacted riparian buffer zone in the southeastern coastal plain","volume":"7","author":"Ducey","year":"2013","journal-title":"Open Microbiol. J."},{"issue":"19","key":"10.1016\/j.watres.2014.11.003_bib19","doi-asserted-by":"crossref","first-page":"2460","DOI":"10.1093\/bioinformatics\/btq461","article-title":"Search and clustering orders of magnitude faster than BLAST","volume":"26","author":"Edgar","year":"2010","journal-title":"Bioinformatics"},{"issue":"3","key":"10.1016\/j.watres.2014.11.003_bib20","doi-asserted-by":"crossref","first-page":"e92579","DOI":"10.1371\/journal.pone.0092579","article-title":"Seasonal variations and resilience of bacterial communities in a sewage polluted urban river","volume":"9","author":"Garcia-Armisen","year":"2014","journal-title":"PLoS One"},{"issue":"8","key":"10.1016\/j.watres.2014.11.003_bib21","doi-asserted-by":"crossref","first-page":"e23785","DOI":"10.1371\/journal.pone.0023785","article-title":"Metagenomics of the water column in the pristine upper course of the Amazon river","volume":"6","author":"Ghai","year":"2011","journal-title":"PLoS One"},{"issue":"12","key":"10.1016\/j.watres.2014.11.003_bib22","doi-asserted-by":"crossref","first-page":"3235","DOI":"10.1111\/j.1462-2920.2011.02549.x","article-title":"Differential decay of human faecal Bacteroides in marine and freshwater","volume":"13","author":"Green","year":"2011","journal-title":"Environ. Microbiol."},{"issue":"7","key":"10.1016\/j.watres.2014.11.003_bib23","doi-asserted-by":"crossref","first-page":"e40888","DOI":"10.1371\/journal.pone.0040888","article-title":"Molecular detection of eukaryotes in a single human stool sample from Senegal","volume":"7","author":"Hamad","year":"2012","journal-title":"PLoS One"},{"issue":"1","key":"10.1016\/j.watres.2014.11.003_bib24","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1111\/1574-6976.12031","article-title":"Microbial source tracking markers for detection of fecal contamination in environmental waters: relationships between pathogens and human health outcomes","volume":"38","author":"Harwood","year":"2014","journal-title":"FEMS Microbiol. Rev."},{"issue":"4","key":"10.1016\/j.watres.2014.11.003_bib25","doi-asserted-by":"crossref","first-page":"695","DOI":"10.2166\/wh.2011.154","article-title":"Culture-based indicators of fecal contamination and molecular microbial indicators rarely correlate with Campylobacter spp. in recreational waters","volume":"9","author":"Hellein","year":"2011","journal-title":"J. Water Health"},{"issue":"1","key":"10.1016\/j.watres.2014.11.003_bib26","doi-asserted-by":"crossref","first-page":"120","DOI":"10.2166\/wh.2012.192","article-title":"Occurrence of thermotolerant Campylobacter spp. and adenoviruses in Finnish bathing waters and purified sewage effluents","volume":"11","author":"Hokajarvi","year":"2013","journal-title":"J. Water Health"},{"issue":"12","key":"10.1016\/j.watres.2014.11.003_bib27","doi-asserted-by":"crossref","first-page":"2127","DOI":"10.1016\/S1001-0742(11)61049-8","article-title":"Responses of protists with different feeding habits to the changes of activated sludge conditions: a study based on biomass data","volume":"24","author":"Hu","year":"2012","journal-title":"J. Environ. Sci. (China)"},{"issue":"9","key":"10.1016\/j.watres.2014.11.003_bib28","doi-asserted-by":"crossref","first-page":"2339","DOI":"10.1111\/j.1462-2920.2009.01960.x","article-title":"Comparison of the structure and composition of bacterial communities from temperate and tropical freshwater ecosystems","volume":"11","author":"Humbert","year":"2009","journal-title":"Environ. Microbiol."},{"issue":"3","key":"10.1016\/j.watres.2014.11.003_bib29","doi-asserted-by":"crossref","first-page":"1247","DOI":"10.1016\/j.watres.2010.10.001","article-title":"Molecular subtypes of Campylobacter spp., Salmonella enterica, and Escherichia coli O157:H7 isolated from faecal and surface water samples in the Oldman River watershed, Alberta, Canada","volume":"45","author":"Jokinen","year":"2011","journal-title":"Water Res."},{"issue":"9","key":"10.1016\/j.watres.2014.11.003_bib30","doi-asserted-by":"crossref","first-page":"761","DOI":"10.1038\/nmeth.1650","article-title":"Bayesian community-wide culture-independent microbial source tracking","volume":"8","author":"Knights","year":"2011","journal-title":"Nat. Methods"},{"issue":"7","key":"10.1016\/j.watres.2014.11.003_bib31","doi-asserted-by":"crossref","first-page":"2488","DOI":"10.1128\/AEM.03781-12","article-title":"Differential decay of enterococci and Escherichia coli originating from two fecal pollution sources","volume":"79","author":"Korajkic","year":"2013","journal-title":"Appl. Environ. Microbiol."},{"issue":"13","key":"10.1016\/j.watres.2014.11.003_bib32","doi-asserted-by":"crossref","first-page":"3952","DOI":"10.1128\/AEM.00388-14","article-title":"Biotic interactions and sunlight Affect persistence of fecal indicator bacteria and microbial source tracking genetic markers in the upper Mississippi river","volume":"80","author":"Korajkic","year":"2014","journal-title":"Appl. Environ. Microbiol."},{"issue":"9","key":"10.1016\/j.watres.2014.11.003_bib33","doi-asserted-by":"crossref","first-page":"e44224","DOI":"10.1371\/journal.pone.0044224","article-title":"Groundtruthing next-gen sequencing for microbial ecology-biases and errors in community structure estimates from PCR amplicon pyrosequencing","volume":"7","author":"Lee","year":"2012","journal-title":"PLoS One"},{"issue":"1","key":"10.1016\/j.watres.2014.11.003_bib34","doi-asserted-by":"crossref","first-page":"94","DOI":"10.1007\/s00248-008-9398-3","article-title":"Description of freshwater bacterial assemblages from the upper parana river floodpulse system","volume":"57","author":"Lemke","year":"2009","journal-title":"Braz. Microb. Ecol."},{"issue":"9","key":"10.1016\/j.watres.2014.11.003_bib35","doi-asserted-by":"crossref","first-page":"1665","DOI":"10.1038\/ismej.2012.26","article-title":"Spatial and temporal dynamics of the microbial community in the Hanford unconfined aquifer","volume":"6","author":"Lin","year":"2012","journal-title":"ISME J."},{"issue":"12","key":"10.1016\/j.watres.2014.11.003_bib36","doi-asserted-by":"crossref","first-page":"8228","DOI":"10.1128\/AEM.71.12.8228-8235.2005","article-title":"UniFrac: a new phylogenetic method for comparing microbial communities","volume":"71","author":"Lozupone","year":"2005","journal-title":"Appl. Environ. Microbiol."},{"issue":"2","key":"10.1016\/j.watres.2014.11.003_bib37","doi-asserted-by":"crossref","first-page":"301","DOI":"10.1078\/0723-2020-00090","article-title":"Ciliate communities of rotating biological contactor biofilms: a multivariate approach","volume":"25","author":"Martin-Cereceda","year":"2002","journal-title":"Syst. Appl. Microbiol."},{"issue":"8","key":"10.1016\/j.watres.2014.11.003_bib38","doi-asserted-by":"crossref","first-page":"2213","DOI":"10.1111\/1462-2920.12092","article-title":"Sewage reflects the distribution of human faecal Lachnospiraceae","volume":"15","author":"McLellan","year":"2013","journal-title":"Environ. Microbiol."},{"issue":"7","key":"10.1016\/j.watres.2014.11.003_bib39","doi-asserted-by":"crossref","first-page":"2203","DOI":"10.1128\/AEM.02777-09","article-title":"Identification of ciliate grazers of autotrophic bacteria in ammonia-oxidizing activated sludge by RNA stable isotope probing","volume":"76","author":"Moreno","year":"2010","journal-title":"Appl. Environ. Microbiol."},{"issue":"5","key":"10.1016\/j.watres.2014.11.003_bib40","doi-asserted-by":"crossref","first-page":"491","DOI":"10.1007\/s12275-008-0199-7","article-title":"Bacterial, archaeal, and eukaryal diversity in the intestines of Korean people","volume":"46","author":"Nam","year":"2008","journal-title":"J. Microbiol."},{"issue":"4","key":"10.1016\/j.watres.2014.11.003_bib41","doi-asserted-by":"crossref","first-page":"1011","DOI":"10.1007\/s00248-013-0200-9","article-title":"A microbial signature approach to identify fecal pollution in the waters off an urbanized coast of Lake Michigan","volume":"65","author":"Newton","year":"2013","journal-title":"Microb. Ecol."},{"issue":"6","key":"10.1016\/j.watres.2014.11.003_bib42","doi-asserted-by":"crossref","first-page":"956","DOI":"10.1111\/j.1462-2920.2005.00979.x","article-title":"Microbial community dynamics in a humic lake: differential persistence of common freshwater phylotypes","volume":"8","author":"Newton","year":"2006","journal-title":"Environ. Microbiol."},{"issue":"4","key":"10.1016\/j.watres.2014.11.003_bib43","doi-asserted-by":"crossref","first-page":"887","DOI":"10.1111\/j.1462-2920.2010.02387.x","article-title":"Seasonal differences in bacterial community composition following nutrient additions in a eutrophic lake","volume":"13","author":"Newton","year":"2011","journal-title":"Environ. Microbiol."},{"issue":"17","key":"10.1016\/j.watres.2014.11.003_bib44","doi-asserted-by":"crossref","first-page":"6000","DOI":"10.1128\/AEM.00107-11","article-title":"Metagenomic insights into the evolution, function, and complexity of the planktonic microbial community of Lake Lanier, a temperate freshwater ecosystem","volume":"77","author":"Oh","year":"2011","journal-title":"Appl. Environ. Microbiol."},{"issue":"4","key":"10.1016\/j.watres.2014.11.003_bib45","doi-asserted-by":"crossref","first-page":"935","DOI":"10.1007\/s00253-007-1048-z","article-title":"Persistence of host-specific Bacteroides-Prevotella 16S rRNA genetic markers in environmental waters: effects of temperature and salinity","volume":"76","author":"Okabe","year":"2007","journal-title":"Appl. Microbiol. Biotechnol."},{"issue":"298","key":"10.1016\/j.watres.2014.11.003_bib46","first-page":"1","article-title":"Defining the diversity of microbial eukaryotic communities in the mammalian gut within the context of environmental eukaryotic diversity","volume":"5","author":"Parfrey","year":"2014","journal-title":"Front. Aquatic Microbiol."},{"issue":"7","key":"10.1016\/j.watres.2014.11.003_bib47","doi-asserted-by":"crossref","first-page":"537","DOI":"10.1038\/nrmicro1180","article-title":"Predation on prokaryotes in the water column and its ecological implications","volume":"3","author":"Pernthaler","year":"2005","journal-title":"Nat. Rev. Microbiol."},{"issue":"10","key":"10.1016\/j.watres.2014.11.003_bib48","doi-asserted-by":"crossref","first-page":"6272","DOI":"10.1128\/AEM.70.10.6272-6281.2004","article-title":"Bloom of filamentous bacteria in a mesotrophic lake: identity and potential controlling mechanism","volume":"70","author":"Pernthaler","year":"2004","journal-title":"Appl. Environ. Microbiol."},{"issue":"8","key":"10.1016\/j.watres.2014.11.003_bib49","doi-asserted-by":"crossref","first-page":"e43093","DOI":"10.1371\/journal.pone.0043093","article-title":"PCR biases distort bacterial and archaeal community structure in pyrosequencing datasets","volume":"7","author":"Pinto","year":"2012","journal-title":"PLoS One"},{"issue":"3","key":"10.1016\/j.watres.2014.11.003_bib50","doi-asserted-by":"crossref","first-page":"354","DOI":"10.1111\/j.1574-6941.2007.00396.x","article-title":"Fate of heterotrophic bacteria in Lake Tanganyika (East Africa)","volume":"62","author":"Pirlot","year":"2007","journal-title":"FEMS Microbiol. Ecol."},{"issue":"21","key":"10.1016\/j.watres.2014.11.003_bib51","doi-asserted-by":"crossref","first-page":"7188","DOI":"10.1093\/nar\/gkm864","article-title":"SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB","volume":"35","author":"Pruesse","year":"2007","journal-title":"Nucleic Acids Res."},{"issue":"4","key":"10.1016\/j.watres.2014.11.003_bib52","doi-asserted-by":"crossref","first-page":"239","DOI":"10.1080\/09603120802460376","article-title":"Sewage effluent as a source of Campylobacter sp. in a surface water catchment","volume":"19","author":"Rechenburg","year":"2009","journal-title":"Int. J. Environ. Health Res."},{"issue":"1","key":"10.1016\/j.watres.2014.11.003_bib53","doi-asserted-by":"crossref","first-page":"1","DOI":"10.7589\/2011-10-287","article-title":"Characterization of Campylobacter from resident Canada geese in an urban environment","volume":"49","author":"Rutledge","year":"2013","journal-title":"J. Wildl. Dis."},{"issue":"12","key":"10.1016\/j.watres.2014.11.003_bib54","doi-asserted-by":"crossref","first-page":"1183","DOI":"10.1038\/ismej.2008.76","article-title":"Micro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces","volume":"2","author":"Scanlan","year":"2008","journal-title":"ISME J."},{"issue":"1\u20133","key":"10.1016\/j.watres.2014.11.003_bib55","doi-asserted-by":"crossref","first-page":"152","DOI":"10.1016\/j.scitotenv.2006.12.010","article-title":"Fecal bacteria in the rivers of the Seine drainage network (France): sources, fate and modelling","volume":"375","author":"Servais","year":"2007","journal-title":"Sci. Total Environ."},{"issue":"9","key":"10.1016\/j.watres.2014.11.003_bib56","doi-asserted-by":"crossref","first-page":"2906","DOI":"10.1128\/AEM.03448-12","article-title":"Comparison of the microbial community structures of untreated wastewaters from different geographic locales","volume":"79","author":"Shanks","year":"2013","journal-title":"Appl. Environ. Microbiol."},{"issue":"5","key":"10.1016\/j.watres.2014.11.003_bib57","doi-asserted-by":"crossref","first-page":"1147","DOI":"10.1111\/jam.12323","article-title":"Application of Illumina next-generation sequencing to characterize the bacterial community of the Upper Mississippi River","volume":"115","author":"Staley","year":"2013","journal-title":"J. Appl. Microbiol."},{"issue":"1","key":"10.1016\/j.watres.2014.11.003_bib58","doi-asserted-by":"crossref","first-page":"93","DOI":"10.1021\/es201380c","article-title":"Integrated online system for a pyrosequencing-based microbial source tracking method that targets Bacteroidetes 16S rDNA","volume":"46","author":"Unno","year":"2012","journal-title":"Environ. Sci. Technol."},{"issue":"20","key":"10.1016\/j.watres.2014.11.003_bib59","doi-asserted-by":"crossref","first-page":"7777","DOI":"10.1021\/es101500z","article-title":"Use of barcoded pyrosequencing and shared OTUs to determine sources of fecal bacteria in watersheds","volume":"44","author":"Unno","year":"2010","journal-title":"Environ. Sci. Technol."},{"issue":"3","key":"10.1016\/j.watres.2014.11.003_bib60","doi-asserted-by":"crossref","first-page":"1053","DOI":"10.1111\/j.1365-2672.2010.04730.x","article-title":"The occurrence of Campylobacter in river water and waterfowl within a watershed in southern Ontario, Canada","volume":"109","author":"Van Dyke","year":"2010","journal-title":"J. Appl. Microbiol."},{"issue":"23","key":"10.1016\/j.watres.2014.11.003_bib61","doi-asserted-by":"crossref","first-page":"8264","DOI":"10.1128\/AEM.01821-12","article-title":"Comparison of the levels of bacterial diversity in freshwater, intertidal wetland, and marine sediments by using millions of illumina tags","volume":"78","author":"Wang","year":"2012","journal-title":"Appl. Environ. Microbiol."},{"issue":"2","key":"10.1016\/j.watres.2014.11.003_bib62","doi-asserted-by":"crossref","first-page":"517","DOI":"10.1111\/j.1462-2920.2012.02877.x","article-title":"The influence of predation and competition on the survival of commensal and pathogenic fecal bacteria in aquatic habitats","volume":"15","author":"Wanjugi","year":"2013","journal-title":"Environ. Microbiol."},{"key":"10.1016\/j.watres.2014.11.003_bib63","doi-asserted-by":"crossref","DOI":"10.1007\/s00248-014-0444-z","article-title":"Protozoan predation is Differentially Affected by Motility of Enteric pathogens in water vs. Sediments","author":"Wanjugi","year":"2014","journal-title":"Microb. Ecol."},{"key":"10.1016\/j.watres.2014.11.003_bib64","doi-asserted-by":"crossref","first-page":"255","DOI":"10.1186\/1471-2180-10-255","article-title":"Effects of polymerase, template dilution and cycle number on PCR based 16 S rRNA diversity analysis using the deep sequencing method","volume":"10","author":"Wu","year":"2010","journal-title":"BMC Microbiol."},{"issue":"5","key":"10.1016\/j.watres.2014.11.003_bib65","doi-asserted-by":"crossref","first-page":"415","DOI":"10.1038\/nbt.1823","article-title":"Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications","volume":"29","author":"Yilmaz","year":"2011","journal-title":"Nat. Biotechnol."},{"issue":"Database issue","key":"10.1016\/j.watres.2014.11.003_bib66","doi-asserted-by":"crossref","first-page":"D643","DOI":"10.1093\/nar\/gkt1209","article-title":"The SILVA and \u201cAll-species living tree project (LTP)\u201d taxonomic frameworks","volume":"42","author":"Yilmaz","year":"2014","journal-title":"Nucleic Acids Res."},{"issue":"1","key":"10.1016\/j.watres.2014.11.003_bib67","doi-asserted-by":"crossref","first-page":"134","DOI":"10.1007\/s00248-006-9155-4","article-title":"Ciliates are the dominant grazers on pico- and nanoplankton in a shallow, naturally highly eutrophic lake","volume":"53","author":"Zingel","year":"2007","journal-title":"Microb. Ecol."}],"container-title":["Water Research"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0043135414007726?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0043135414007726?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2019,11,1]],"date-time":"2019-11-01T20:17:04Z","timestamp":1572639424000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0043135414007726"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,2]]},"references-count":67,"alternative-id":["S0043135414007726"],"URL":"https:\/\/doi.org\/10.1016\/j.watres.2014.11.003","relation":{},"ISSN":["0043-1354"],"issn-type":[{"value":"0043-1354","type":"print"}],"subject":[],"published":{"date-parts":[[2015,2]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Changes in bacterial and eukaryotic communities during sewage decomposition in Mississippi river water","name":"articletitle","label":"Article Title"},{"value":"Water Research","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.watres.2014.11.003","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"Published by Elsevier Ltd.","name":"copyright","label":"Copyright"}]}}