{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,22]],"date-time":"2026-10-22T03:55:01Z","timestamp":1792641301977,"version":"4.5.0"},"reference-count":67,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2026,10,1]],"date-time":"2026-10-01T00:00:00Z","timestamp":1790812800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,10,1]],"date-time":"2026-10-01T00:00:00Z","timestamp":1790812800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,10,1]],"date-time":"2026-10-01T00:00:00Z","timestamp":1790812800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-017"},{"start":{"date-parts":[[2026,10,1]],"date-time":"2026-10-01T00:00:00Z","timestamp":1790812800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2026,10,1]],"date-time":"2026-10-01T00:00:00Z","timestamp":1790812800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-012"},{"start":{"date-parts":[[2026,10,1]],"date-time":"2026-10-01T00:00:00Z","timestamp":1790812800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2026,10,1]],"date-time":"2026-10-01T00:00:00Z","timestamp":1790812800000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-004"}],"funder":[{"DOI":"10.13039\/100028915","name":"Teagle Foundation","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100028915","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Water Research"],"published-print":{"date-parts":[[2026,10]]},"DOI":"10.1016\/j.watres.2026.126548","type":"journal-article","created":{"date-parts":[[2026,7,20]],"date-time":"2026-07-20T23:05:40Z","timestamp":1784588740000},"page":"126548","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":1,"special_numbering":"C","title":["Integrating multi-method approach reveals extensive antibiotic resistance dissemination from concentrated animal feeding operations to surface waters"],"prefix":"10.1016","volume":"305","author":[{"ORCID":"https:\/\/orcid.org\/0009-0004-3703-7891","authenticated-orcid":false,"given":"Yuwei","family":"Kong","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Karina","family":"Jimenez","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Katie","family":"Osborn","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0007-0952-1768","authenticated-orcid":false,"given":"Yuhui","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0003-4925-321X","authenticated-orcid":false,"given":"Samantha","family":"Low","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8246-2537","authenticated-orcid":false,"given":"Camille","family":"Sytko","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0007-7990-6372","authenticated-orcid":false,"given":"Tracy","family":"Tran","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0000-3711-1060","authenticated-orcid":false,"given":"Young Seo Amy","family":"Choi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sih-Chi Jimmy","family":"Ho","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jasmine","family":"Nguyen","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tiffany","family":"Astilla","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sara","family":"Aziz","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Olivia","family":"Low","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0002-8846-3108","authenticated-orcid":false,"given":"Renee","family":"Chowdhry","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lynn","family":"Henning","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cole","family":"Dickerson","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9413-8873","authenticated-orcid":false,"given":"Adriane","family":"Jones","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3298-9602","authenticated-orcid":false,"given":"Shaily","family":"Mahendra","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jennifer Ayla","family":"Jay","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.watres.2026.126548_bib0001","doi-asserted-by":"crossref","first-page":"414","DOI":"10.1038\/s43856-025-01090-4","article-title":"A one health framework for global and local stewardship across the antimicrobial lifecycle","volume":"5","author":"Altevogt","year":"2025","journal-title":"Commun. Med."},{"key":"10.1016\/j.watres.2026.126548_bib0002","doi-asserted-by":"crossref","DOI":"10.1093\/bioinformatics\/btaf147","article-title":"CoverM: read alignment statistics for metagenomics","volume":"41","author":"Aroney","year":"2025","journal-title":"Bioinformatics"},{"key":"10.1016\/j.watres.2026.126548_bib0003","doi-asserted-by":"crossref","DOI":"10.1016\/j.envint.2023.107784","article-title":"Airborne antibiotic resistome and human health risk in railway stations during COVID-19 pandemic","volume":"172","author":"Bai","year":"2023","journal-title":"Environ. Int."},{"key":"10.1016\/j.watres.2026.126548_bib0004","doi-asserted-by":"crossref","DOI":"10.1093\/femsec\/fiy131","article-title":"Agricultural contamination impacts antibiotic resistance gene abundances in river bed sediment temporally","volume":"94","author":"Beattie","year":"2018","journal-title":"FEMS Microbiol. Ecol."},{"key":"10.1016\/j.watres.2026.126548_bib0005","doi-asserted-by":"crossref","first-page":"6812","DOI":"10.1016\/j.watres.2012.12.046","article-title":"Performance of forty-one microbial source tracking methods: a twenty-seven lab evaluation study","volume":"47","author":"Boehm","year":"2013","journal-title":"Water Res."},{"key":"10.1016\/j.watres.2026.126548_bib0006","doi-asserted-by":"crossref","first-page":"352","DOI":"10.1002\/jeq2.20350","article-title":"Fate and seasonality of antimicrobial resistance genes during full-scale anaerobic digestion of cattle manure across seven livestock production facilities","volume":"51","author":"Burch","year":"2022","journal-title":"J. Env. Quality"},{"key":"10.1016\/j.watres.2026.126548_bib0007","doi-asserted-by":"crossref","first-page":"270","DOI":"10.1002\/jeq2.20443","article-title":"Microbial source tracking and land use associations for antibiotic resistance genes in private wells influenced by human and livestock fecal sources","volume":"52","author":"Burch","year":"2023","journal-title":"J. Env. Quality"},{"key":"10.1016\/j.watres.2026.126548_bib0008","doi-asserted-by":"crossref","first-page":"308","DOI":"10.1289\/ehp.8839","article-title":"Impacts of waste from concentrated animal feeding operations on water quality","volume":"115","author":"Burkholder","year":"2007","journal-title":"Env. Health Perspect."},{"key":"10.1016\/j.watres.2026.126548_bib0009","doi-asserted-by":"crossref","first-page":"611","DOI":"10.1373\/clinchem.2008.112797","article-title":"The MIQE Guidelines: minimum information for publication of quantitative real-time PCR experiments","volume":"55","author":"Bustin","year":"2009","journal-title":"Clin. Chem."},{"key":"10.1016\/j.watres.2026.126548_bib0010","doi-asserted-by":"crossref","DOI":"10.1016\/j.scitotenv.2024.177577","article-title":"The influence of urbanization and water reclamation plants on fecal indicator bacteria and antibiotic resistance in the Los Angeles River watershed: a case study with complementary monitoring methods","volume":"957","author":"Callejas","year":"2024","journal-title":"Sci. Total Environ."},{"key":"10.1016\/j.watres.2026.126548_bib0011","unstructured":"CDC, 2019. Antibiotic Resistance Threats in the United States. Centers for Disease Control and Prevention."},{"key":"10.1016\/j.watres.2026.126548_bib0012","doi-asserted-by":"crossref","DOI":"10.1111\/1758-2229.70151","article-title":"Community-engaged course-based undergraduate research of multidrug resistance in escherichiacoli in water near dairy and Hog farms in Michigan","volume":"17","author":"Chowdhry","year":"2025","journal-title":"Environ. Microbiol. Rep."},{"key":"10.1016\/j.watres.2026.126548_bib0013","doi-asserted-by":"crossref","DOI":"10.1128\/aem.01390-24","article-title":"Assessing antimicrobial resistance in pasture-based dairy farms: a 15-month surveillance study in New Zealand","volume":"90","author":"Collis","year":"2024","journal-title":"Appl Environ. Microbiol."},{"key":"10.1016\/j.watres.2026.126548_bib0014","doi-asserted-by":"crossref","first-page":"45","DOI":"10.1016\/j.envint.2015.04.005","article-title":"Does human activity impact the natural antibiotic resistance background? Abundance of antibiotic resistance genes in 21 Swiss lakes","volume":"81","author":"Czekalski","year":"2015","journal-title":"Environ. Int."},{"key":"10.1016\/j.watres.2026.126548_bib0015","doi-asserted-by":"crossref","first-page":"20","DOI":"10.1186\/s40168-021-01216-5","article-title":"Long-read metagenomic sequencing reveals shifts in associations of antibiotic resistance genes with mobile genetic elements from sewage to activated sludge","volume":"10","author":"Dai","year":"2022","journal-title":"Microbiome"},{"key":"10.1016\/j.watres.2026.126548_bib0016","doi-asserted-by":"crossref","first-page":"2513","DOI":"10.1007\/s10750-025-06104-9","article-title":"Prevalence and detection methods of bacA in aquatic environments","volume":"853","author":"Di Nezio","year":"2026","journal-title":"Hydrobiologia"},{"key":"10.1016\/j.watres.2026.126548_bib0017","doi-asserted-by":"crossref","first-page":"142","DOI":"10.1038\/s41576-023-00649-y","article-title":"Genomic surveillance for antimicrobial resistance \u2014 a one Health perspective","volume":"25","author":"Djordjevic","year":"2024","journal-title":"Nat. Rev. Genet."},{"key":"10.1016\/j.watres.2026.126548_bib0018","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1002\/lol2.10228","article-title":"Tributary chloride loading into Lake Michigan","volume":"8","author":"Dugan","year":"2023","journal-title":"Limnol Ocean. Lett."},{"key":"10.1016\/j.watres.2026.126548_bib0019","doi-asserted-by":"crossref","DOI":"10.1038\/s41598-025-98498-8","article-title":"Seasonal and environmental drivers of antibiotic resistance and virulence in Escherichia coli from aquaculture and their public health implications","volume":"15","author":"El Badawy","year":"2025","journal-title":"Sci. Rep."},{"key":"10.1016\/j.watres.2026.126548_bib0020","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2025.1549044","article-title":"Detection of antimicrobial resistance via state-of-the-art technologies versus conventional methods","volume":"16","author":"Elbehiry","year":"2025","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.watres.2026.126548_bib0021","article-title":"Summary report on antimicrobials sold or distributed for use in food-producing animals","year":"2014","journal-title":"Food Drug Adm."},{"key":"10.1016\/j.watres.2026.126548_bib0022","series-title":"2024 Summary Report On Antimicrobials Sold Or Distributed for Use in Food-Producing Animals","year":"2025"},{"key":"10.1016\/j.watres.2026.126548_bib0023","doi-asserted-by":"crossref","DOI":"10.1016\/j.envint.2023.107751","article-title":"Airborne bacterial community and antibiotic resistome in the swine farming environment: metagenomic insights into livestock relevance, pathogen hosts and public risks","volume":"172","author":"Gao","year":"2023","journal-title":"Environ. Int."},{"key":"10.1016\/j.watres.2026.126548_bib0024","doi-asserted-by":"crossref","first-page":"55","DOI":"10.1016\/j.prevetmed.2009.03.010","article-title":"Antimicrobial drug use and reason for treatment in 203 western Canadian cow\u2013calf herds during calving season","volume":"90","author":"Gow","year":"2009","journal-title":"Prev. Vet. Med."},{"key":"10.1016\/j.watres.2026.126548_bib0025","doi-asserted-by":"crossref","DOI":"10.1093\/femsec\/fiy038","article-title":"Host range of antibiotic resistance genes in wastewater treatment plant influent and effluent","volume":"94","author":"Hultman","year":"2018","journal-title":"FEMS Microbiol. Ecol."},{"key":"10.1016\/j.watres.2026.126548_bib0026","doi-asserted-by":"crossref","first-page":"64","DOI":"10.1016\/j.ecoenv.2018.05.044","article-title":"Exploring the differences of antibiotic resistance genes profiles between river surface water and sediments using metagenomic approach","volume":"161","author":"Jiang","year":"2018","journal-title":"Ecotoxicol. Environ. Saf."},{"key":"10.1016\/j.watres.2026.126548_bib0027","doi-asserted-by":"crossref","DOI":"10.1016\/j.onehlt.2025.100997","article-title":"Evaluation of a modified IDEXX method for antimicrobial resistance monitoring of extended beta-lactamases-producing Escherichia coli in impacted waters near the U.S.-Mexico border","volume":"20","author":"Jimenez","year":"2025","journal-title":"One Health"},{"key":"10.1016\/j.watres.2026.126548_bib0028","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2024.121425","article-title":"To what extent do water reuse treatments reduce antibiotic resistance indicators? A comparison of two full-scale systems","volume":"254","author":"Keenum","year":"2024","journal-title":"Water Res."},{"key":"10.1016\/j.watres.2026.126548_bib0029","doi-asserted-by":"crossref","first-page":"4395","DOI":"10.1080\/10643389.2021.2024739","article-title":"A framework for standardized qPCR-targets and protocols for quantifying antibiotic resistance in surface water, recycled water and wastewater","volume":"52","author":"Keenum","year":"2022","journal-title":"Crit. Rev. Environ. Sci. Technol."},{"key":"10.1016\/j.watres.2026.126548_bib0030","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2024.121584","article-title":"Dissemination of antibiotic resistance genes from aboveground sources to groundwater in livestock farms","volume":"256","author":"Lei","year":"2024","journal-title":"Water Res."},{"key":"10.1016\/j.watres.2026.126548_bib0031","doi-asserted-by":"crossref","DOI":"10.1016\/j.envint.2021.106620","article-title":"Co-occurrence of crAssphage and antibiotic resistance genes in agricultural soils of the Yangtze River Delta, China","volume":"156","author":"Li","year":"2021","journal-title":"Environ. Int."},{"key":"10.1016\/j.watres.2026.126548_bib0032","doi-asserted-by":"crossref","DOI":"10.1016\/j.envres.2023.117801","article-title":"Mobile genetic elements affect the dissemination of antibiotic resistance genes (ARGs) of clinical importance in the environment","volume":"243","author":"Li","year":"2024","journal-title":"Environ. Res."},{"key":"10.1016\/j.watres.2026.126548_bib0033","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2025.124803","article-title":"Swine farming emissions drive deterministic assembly of antibiotic resistance genes in receiving River: a new ecological perspective","volume":"289","author":"Liu","year":"2026","journal-title":"Water Res."},{"key":"10.1016\/j.watres.2026.126548_bib0034","doi-asserted-by":"crossref","first-page":"88","DOI":"10.3390\/tropicalmed4020088","article-title":"The one health approach\u2014why is it so important?","volume":"4","author":"Mackenzie","year":"2019","journal-title":"TropicalMed"},{"key":"10.1016\/j.watres.2026.126548_bib0035","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2021.657954","article-title":"Evaluation of metagenomic-enabled antibiotic resistance surveillance at a conventional wastewater treatment plant","volume":"12","author":"Majeed","year":"2021","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.watres.2026.126548_bib0036","doi-asserted-by":"crossref","first-page":"365","DOI":"10.1126\/science.1159483","article-title":"Antibiotics and antibiotic resistance genes in natural environments","volume":"321","author":"Mart\u00ednez","year":"2008","journal-title":"Science"},{"key":"10.1016\/j.watres.2026.126548_bib0037","doi-asserted-by":"crossref","DOI":"10.1093\/femsec\/fiy010","article-title":"Occurrence and abundance of antibiotic resistance genes in agricultural soil receiving dairy manure","volume":"94","author":"McKinney","year":"2018","journal-title":"FEMS Microbiol. Ecol."},{"key":"10.1016\/j.watres.2026.126548_bib0038","doi-asserted-by":"crossref","first-page":"92","DOI":"10.1016\/j.resmic.2011.10.010","article-title":"Novel gene cassettes and integrons in antibiotic-resistant bacteria isolated from urban wastewaters","volume":"163","author":"Moura","year":"2012","journal-title":"Res. Microbiol."},{"key":"10.1016\/j.watres.2026.126548_bib0039","doi-asserted-by":"crossref","first-page":"e1056","DOI":"10.1016\/S2666-5247(23)00284-7","article-title":"Exploiting genomics for antimicrobial resistance surveillance at one health interfaces","volume":"4","author":"Muloi","year":"2023","journal-title":"Lancet Microbe"},{"key":"10.1016\/j.watres.2026.126548_bib0040","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2014.00643","article-title":"Mechanisms of polymyxin resistance: acquired and intrinsic resistance in bacteria","volume":"5","author":"Olaitan","year":"2014","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.watres.2026.126548_bib0041","doi-asserted-by":"crossref","first-page":"42","DOI":"10.1186\/s40793-022-00437-x","article-title":"Metagenomic assembly reveals hosts and mobility of common antibiotic resistome in animal manure and commercial compost","volume":"17","author":"Qiu","year":"2022","journal-title":"Environ. Microbiome"},{"key":"10.1016\/j.watres.2026.126548_bib0042","doi-asserted-by":"crossref","DOI":"10.1093\/femsec\/fiae155","article-title":"MetaCompare 2.0: differential ranking of ecological and human health resistome risks","volume":"100","author":"Rumi","year":"2024","journal-title":"FEMS Microbiol. Ecol."},{"key":"10.1016\/j.watres.2026.126548_bib0043","doi-asserted-by":"crossref","first-page":"101","DOI":"10.1016\/j.jgar.2021.08.001","article-title":"Environmental antimicrobial resistance and its drivers: a potential threat to public health","volume":"27","author":"Samreen","year":"2021","journal-title":"J. Glob. Antimicrob. Resist."},{"key":"10.1016\/j.watres.2026.126548_bib0044","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2024.121244","article-title":"Linking antibiotic resistance gene patterns with advanced faecal pollution assessment and environmental key parameters along 2300 km of the Danube River","volume":"252","author":"Schachner-Groehs","year":"2024","journal-title":"Water Res."},{"key":"10.1016\/j.watres.2026.126548_bib0045","doi-asserted-by":"crossref","DOI":"10.1016\/j.envpol.2023.121325","article-title":"Extracellular DNA includes an important fraction of high-risk antibiotic resistance genes in treated wastewaters","volume":"323","author":"Sivalingam","year":"2023","journal-title":"Environ. Pollut."},{"key":"10.1016\/j.watres.2026.126548_bib0046","doi-asserted-by":"crossref","first-page":"307","DOI":"10.1016\/j.biortech.2015.06.081","article-title":"Elimination patterns of worldwide used sulfonamides and tetracyclines during anaerobic fermentation","volume":"193","author":"Spielmeyer","year":"2015","journal-title":"Bioresour. Technol."},{"key":"10.1016\/j.watres.2026.126548_bib0047","doi-asserted-by":"crossref","DOI":"10.1016\/j.ese.2024.100502","article-title":"Rapid identification of antibiotic resistance gene hosts by prescreening ARG-like reads","volume":"23","author":"Su","year":"2025","journal-title":"Environ. Sci. Ecotechnology"},{"key":"10.1016\/j.watres.2026.126548_bib0048","doi-asserted-by":"crossref","DOI":"10.1093\/bib\/bbaf589","article-title":"Circling in on plasmids: benchmarking plasmid detection and reconstruction tools for short-read data from diverse species","volume":"26","author":"Teixeira","year":"2025","journal-title":"Brief. Bioinform."},{"key":"10.1016\/j.watres.2026.126548_bib0049","series-title":"Antibiotic Use During Calving Season - | Ag Proud","author":"Thomas","year":"2014"},{"key":"10.1016\/j.watres.2026.126548_bib0050","doi-asserted-by":"crossref","first-page":"29","DOI":"10.1016\/j.ecoenv.2019.01.127","article-title":"Presence and fate of antibiotic residues, antibiotic resistance genes and zoonotic bacteria during biological swine manure treatment","volume":"175","author":"Van Den Meersche","year":"2019","journal-title":"Ecotoxicol. Environ. Saf."},{"key":"10.1016\/j.watres.2026.126548_bib0051","doi-asserted-by":"crossref","first-page":"123","DOI":"10.1038\/s43247-023-00790-w","article-title":"Intensified livestock farming increases antibiotic resistance genotypes and phenotypes in animal feces","volume":"4","author":"Wang","year":"2023","journal-title":"Commun Earth Env."},{"key":"10.1016\/j.watres.2026.126548_bib0052","doi-asserted-by":"crossref","first-page":"817","DOI":"10.1016\/j.ecoenv.2017.09.055","article-title":"Fate of potential indicator antimicrobial resistance genes (ARGs) and bacterial community diversity in simulated manure-soil microcosms","volume":"147","author":"Wang","year":"2018","journal-title":"Ecotoxicol. Environ. Saf."},{"key":"10.1016\/j.watres.2026.126548_bib0053","doi-asserted-by":"crossref","first-page":"4555","DOI":"10.1038\/s41467-024-48352-8","article-title":"The evolution of antibiotic resistance islands occurs within the framework of plasmid lineages","volume":"15","author":"Wang","year":"2024","journal-title":"Nat. Commun."},{"key":"10.1016\/j.watres.2026.126548_bib0054","series-title":"Global Antibiotic Resistance Surveillance Report Summary","year":"2025"},{"key":"10.1016\/j.watres.2026.126548_bib0055","doi-asserted-by":"crossref","first-page":"22832","DOI":"10.1021\/acs.est.5c06023","article-title":"Antarctic environmental resistomes closely associated with human and animal waste releases","volume":"59","author":"Wu","year":"2025","journal-title":"Environ. Sci. Technol."},{"key":"10.1016\/j.watres.2026.126548_bib0056","doi-asserted-by":"crossref","DOI":"10.1016\/j.scitotenv.2020.136975","article-title":"Contamination profile of antibiotic resistance genes in ground water in comparison with surface water","volume":"715","author":"Wu","year":"2020","journal-title":"Sci. Total Environ."},{"key":"10.1016\/j.watres.2026.126548_bib0057","doi-asserted-by":"crossref","first-page":"9713","DOI":"10.1021\/acs.est.3c00159","article-title":"Toward a universal unit for quantification of antibiotic resistance genes in environmental samples","volume":"57","author":"Yin","year":"2023","journal-title":"Environ. Sci. Technol."},{"key":"10.1016\/j.watres.2026.126548_bib0058","doi-asserted-by":"crossref","first-page":"234","DOI":"10.1016\/j.eng.2022.10.011","article-title":"ARGs-OAP v3.0: antibiotic-resistance gene database curation and analysis pipeline optimization","volume":"27","author":"Yin","year":"2023","journal-title":"Engineering"},{"key":"10.1016\/j.watres.2026.126548_bib0059","doi-asserted-by":"crossref","first-page":"4765","DOI":"10.1038\/s41467-021-25096-3","article-title":"An omics-based framework for assessing the health risk of antimicrobial resistance genes","volume":"12","author":"Zhang","year":"2021","journal-title":"Nat. Commun."},{"key":"10.1016\/j.watres.2026.126548_bib0060","doi-asserted-by":"crossref","first-page":"14","DOI":"10.1038\/s41545-025-00446-6","article-title":"Integrating livestock and aquatic plant towards mitigating antibiotic resistance transmission from swine wastewater","volume":"8","author":"Zhang","year":"2025","journal-title":"npj Clean Water"},{"key":"10.1016\/j.watres.2026.126548_bib0061","first-page":"207","article-title":"Elevated antibiotic resistance in Escherichia coli from surface waters impacted by concentrated animal feeding operations in California and Michigan","volume":"18","author":"Zhang","year":"2026","journal-title":"Water (Basel)"},{"key":"10.1016\/j.watres.2026.126548_bib0062","article-title":"Deduplication improves cost-efficiency and yields of De Novo assembly and binning of shotgun metagenomes in microbiome research","volume":"11","author":"Zhang","year":"2023","journal-title":"Microbiol. Spectr."},{"key":"10.1016\/j.watres.2026.126548_bib0063","doi-asserted-by":"crossref","first-page":"2159","DOI":"10.1080\/10643389.2020.1777815","article-title":"Antibiotic resistome in the livestock and aquaculture industries: status and solutions","volume":"51","author":"Zhao","year":"2021","journal-title":"Crit. Rev. Environ. Sci. Technol."},{"key":"10.1016\/j.watres.2026.126548_bib0064","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2025.124937","article-title":"Deep metagenomic insights into the formation characteristics of the resistome in Pristine Saline Lakes","volume":"289","author":"Zhao","year":"2026","journal-title":"Water Res."},{"key":"10.1016\/j.watres.2026.126548_bib0065","doi-asserted-by":"crossref","DOI":"10.1016\/j.envpol.2020.115539","article-title":"Systematic analysis of occurrence, density and ecological risks of 45 veterinary antibiotics: focused on family livestock farms in Erhai Lake basin, Yunnan, China","volume":"267","author":"Zhi","year":"2020","journal-title":"Environ. Pollut."},{"key":"10.1016\/j.watres.2026.126548_bib0066","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2025.124515","article-title":"Tracking mitigation and expression patterns of the antibiotic resistome during full-scale livestock wastewater treatment: comparison between summer and winter conditions","volume":"287","author":"Zhu","year":"2025","journal-title":"Water Res."},{"key":"10.1016\/j.watres.2026.126548_bib0067","doi-asserted-by":"crossref","DOI":"10.1016\/j.watres.2025.124515","article-title":"Tracking mitigation and expression patterns of the antibiotic resistome during full-scale livestock wastewater treatment: comparison between summer and winter conditions","volume":"287","author":"Zhu","year":"2025","journal-title":"Water Res."}],"container-title":["Water Research"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0043135426012224?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0043135426012224?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,9,5]],"date-time":"2026-09-05T12:12:23Z","timestamp":1788610343000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0043135426012224"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,10]]},"references-count":67,"alternative-id":["S0043135426012224"],"URL":"https:\/\/doi.org\/10.1016\/j.watres.2026.126548","relation":{},"ISSN":["0043-1354"],"issn-type":[{"value":"0043-1354","type":"print"}],"subject":[],"published":{"date-parts":[[2026,10]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Integrating multi-method approach reveals extensive antibiotic resistance dissemination from concentrated animal feeding operations to surface waters","name":"articletitle","label":"Article Title"},{"value":"Water Research","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.watres.2026.126548","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 Published by Elsevier Ltd.","name":"copyright","label":"Copyright"}],"article-number":"126548"}}